BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00006050
         (718 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006359525.1| PREDICTED: E3 ubiquitin-protein ligase RLIM-...   253   3e-65
ref|XP_004242710.1| PREDICTED: uncharacterized protein LOC101251...   244   2e-62
ref|XP_006359526.1| PREDICTED: E3 ubiquitin-protein ligase RLIM-...   200   4e-49
ref|XP_002532498.1| ring finger protein, putative [Ricinus commu...    75   3e-11
gb|EMJ05005.1| hypothetical protein PRUPE_ppa003827mg [Prunus pe...    74   6e-11
gb|EOY31301.1| RING/U-box superfamily protein isoform 1 [Theobro...    69   2e-09
ref|XP_002266433.1| PREDICTED: uncharacterized protein LOC100263...    67   8e-09
emb|CAN78871.1| hypothetical protein VITISV_024970 [Vitis vinifera]    66   1e-08
ref|XP_004287233.1| PREDICTED: uncharacterized protein LOC101295...    63   1e-07
ref|XP_003549707.1| PREDICTED: uncharacterized protein DDB_G0271...    59   2e-06

>ref|XP_006359525.1| PREDICTED: E3 ubiquitin-protein ligase RLIM-like isoform X1
           [Solanum tuberosum]
          Length = 521

 Score =  253 bits (647), Expect = 3e-65
 Identities = 145/188 (77%), Positives = 151/188 (80%), Gaps = 5/188 (2%)
 Frame = -1

Query: 550 MGSGSSRLGSRPCRPNRTKRTFSSIFICGAS--SPRRAIEMEDDPAEMLVGSAEPA---K 386
           MGSGSSRLGSR  R NRTKRTF+SIFICGAS  S R A+EME+DPAEMLV SAE A   K
Sbjct: 1   MGSGSSRLGSRSSRSNRTKRTFASIFICGASPSSRRSAVEMEEDPAEMLVDSAEHADTGK 60

Query: 385 LQNSEKDLSPDFVPSQAERGASSASNLVNSEKSTSVDASSNVQGGNRRENSTTKDMELVT 206
           LQNSEKD SPDF+PSQAERGASSASNLVNSEKS SVD SSNVQGGNRRENS TKDMELVT
Sbjct: 61  LQNSEKDPSPDFIPSQAERGASSASNLVNSEKSPSVDPSSNVQGGNRRENS-TKDMELVT 119

Query: 205 QYNPGRTRSETASTSWDDRSFPYPLSLNKRAXXXXXXXXXXXXXXXXVSQVFSGYSRSSS 26
           QYNPGR R ETASTS DDRSF YPLSLN+RA                VSQVF+GYS SSS
Sbjct: 120 QYNPGRKRGETASTSRDDRSFRYPLSLNRRA-DDDVVNNVATTVNVDVSQVFAGYSHSSS 178

Query: 25  PLSHGNGE 2
           PLSHGNGE
Sbjct: 179 PLSHGNGE 186


>ref|XP_004242710.1| PREDICTED: uncharacterized protein LOC101251898 [Solanum
           lycopersicum]
          Length = 521

 Score =  244 bits (623), Expect = 2e-62
 Identities = 141/188 (75%), Positives = 148/188 (78%), Gaps = 5/188 (2%)
 Frame = -1

Query: 550 MGSGSSRLGSRPCRPNRTKRTFSSIFICGAS--SPRRAIEMEDDPAEMLVGSAEPA---K 386
           MGSGSSRLGSR  R NRTKR F+SIFICGAS  S R A+EME+DPAEMLV SAE A   K
Sbjct: 1   MGSGSSRLGSRSSRSNRTKRLFASIFICGASPSSRRSALEMEEDPAEMLVDSAEHADTGK 60

Query: 385 LQNSEKDLSPDFVPSQAERGASSASNLVNSEKSTSVDASSNVQGGNRRENSTTKDMELVT 206
           LQNSEKD SPDF+PS AERGASSASNLVNSEKSTS DAS+NVQGGNRRENS TKDMELVT
Sbjct: 61  LQNSEKDPSPDFIPSLAERGASSASNLVNSEKSTSEDASTNVQGGNRRENS-TKDMELVT 119

Query: 205 QYNPGRTRSETASTSWDDRSFPYPLSLNKRAXXXXXXXXXXXXXXXXVSQVFSGYSRSSS 26
           QYN GR   ETASTS DDRSF YPLSLN+RA                VSQVF+GYS SSS
Sbjct: 120 QYNSGRKHGETASTSQDDRSFRYPLSLNRRA-EDDAVNNVATTVNVDVSQVFAGYSHSSS 178

Query: 25  PLSHGNGE 2
           PLSHGNGE
Sbjct: 179 PLSHGNGE 186


>ref|XP_006359526.1| PREDICTED: E3 ubiquitin-protein ligase RLIM-like isoform X2
           [Solanum tuberosum]
          Length = 481

 Score =  200 bits (508), Expect = 4e-49
 Identities = 114/148 (77%), Positives = 118/148 (79%), Gaps = 3/148 (2%)
 Frame = -1

Query: 436 MEDDPAEMLVGSAEPA---KLQNSEKDLSPDFVPSQAERGASSASNLVNSEKSTSVDASS 266
           ME+DPAEMLV SAE A   KLQNSEKD SPDF+PSQAERGASSASNLVNSEKS SVD SS
Sbjct: 1   MEEDPAEMLVDSAEHADTGKLQNSEKDPSPDFIPSQAERGASSASNLVNSEKSPSVDPSS 60

Query: 265 NVQGGNRRENSTTKDMELVTQYNPGRTRSETASTSWDDRSFPYPLSLNKRAXXXXXXXXX 86
           NVQGGNRRENS TKDMELVTQYNPGR R ETASTS DDRSF YPLSLN+RA         
Sbjct: 61  NVQGGNRRENS-TKDMELVTQYNPGRKRGETASTSRDDRSFRYPLSLNRRA-DDDVVNNV 118

Query: 85  XXXXXXXVSQVFSGYSRSSSPLSHGNGE 2
                  VSQVF+GYS SSSPLSHGNGE
Sbjct: 119 ATTVNVDVSQVFAGYSHSSSPLSHGNGE 146


>ref|XP_002532498.1| ring finger protein, putative [Ricinus communis]
           gi|223527773|gb|EEF29874.1| ring finger protein,
           putative [Ricinus communis]
          Length = 550

 Score = 74.7 bits (182), Expect = 3e-11
 Identities = 58/169 (34%), Positives = 81/169 (47%), Gaps = 23/169 (13%)
 Frame = -1

Query: 550 MGSGSSRLGSRPCRP--NRTKRTFSSIFICGASSPRRAIEMEDDPAEMLVGSAE------ 395
           MGSGSSR+G RP R   NR+   F S  +CG SS R +++ME+ P E+ + SAE      
Sbjct: 1   MGSGSSRMGRRPSRARVNRSSSNFFSSLLCGGSSSRDSLQMENYPDEIRMSSAEHCDLIT 60

Query: 394 -----PAKLQNSEKDLSPDFVPSQAERGASSASNLVNSEKSTSVDASSNVQGGNRRENST 230
                PA+  +   D       S AE GASS S    SE +++ D   N +  N  +   
Sbjct: 61  NEIWNPAEESSFLSDTRTGSTSSVAETGASSGSKSATSEGTSAEDGFRNTETSN-LQKCL 119

Query: 229 TKDMELVTQYNPG---------RTRSET-ASTSWDDRSFPYPLSLNKRA 113
           ++  EL+  Y            R RS   A+TS+ D+    P+SLN  A
Sbjct: 120 SESKELIAPYQVSDSYSRDEFCRNRSSAEATTSFKDQESSNPVSLNVSA 168


>gb|EMJ05005.1| hypothetical protein PRUPE_ppa003827mg [Prunus persica]
          Length = 546

 Score = 73.6 bits (179), Expect = 6e-11
 Identities = 63/166 (37%), Positives = 82/166 (49%), Gaps = 23/166 (13%)
 Frame = -1

Query: 550 MGSGSSRLGSRPCRP--NRT-KRTFSSIFICGASSPRRAIEMEDDPAEMLVGSAEPAKL- 383
           MGS SSRLGSRP R   NRT  R+  S F+CG SS R   EMED PAE LV  AE   L 
Sbjct: 1   MGSSSSRLGSRPSRARVNRTTNRSILSSFVCGGSSSRSTYEMEDHPAECLVKYAEQRNLD 60

Query: 382 ----QNSEKDLS------PDFVPSQAERGASSASNLVNSEKSTSVDASSNVQGGNRRENS 233
               +NS +  S        F     E G+SS S +  S+ +   D  S+V   N+ +  
Sbjct: 61  INQVRNSTEGTSLVSSTGARFTCPIIEIGSSSESTVAASQNTYFEDGLSSVHTSNQGK-C 119

Query: 232 TTKDMELVTQYNPG---------RTRSETASTSWDDRSFPYPLSLN 122
            +K  ELV+ +            R  S TASTS+ ++    P+S+N
Sbjct: 120 LSKSKELVSPHQVSADYSHDESCRDNSTTASTSFKEQQSSDPVSVN 165


>gb|EOY31301.1| RING/U-box superfamily protein isoform 1 [Theobroma cacao]
          Length = 540

 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 53/166 (31%), Positives = 81/166 (48%), Gaps = 23/166 (13%)
 Frame = -1

Query: 550 MGSGSSRLGSRPCRPNRTKRT-----FSSIFICGASSPRRAIEMEDDPAEMLVGSAE--- 395
           MGS SSRLGS P R     R       SS+FICG SS +  +EMED PAE+LV SAE   
Sbjct: 1   MGSSSSRLGSNPSRGRLNHRPKWCSRLSSLFICGGSSSQAPLEMEDYPAEILVKSAEHCG 60

Query: 394 -PAKLQNSEKDLSPDFVPSQAERGASSASNLVNSEKSTSVDASSNVQGGNRRENSTT--- 227
               +  S  + S      +    ++     +++E S++     +++GG+R   ++    
Sbjct: 61  PVGNMVQSPLEESTSICSMETRFSSTGTETGISAESSSAASGDPSIEGGSRDLETSNCRK 120

Query: 226 ---KDMELV-----TQYNPG---RTRSETASTSWDDRSFPYPLSLN 122
              +  ELV       Y+ G   R  S +ASTS+ ++    P+S+N
Sbjct: 121 CLIESTELVAPQVSADYSCGESHRDSSTSASTSFKEQQSSDPISVN 166


>ref|XP_002266433.1| PREDICTED: uncharacterized protein LOC100263653 [Vitis vinifera]
          Length = 542

 Score = 66.6 bits (161), Expect = 8e-09
 Identities = 59/166 (35%), Positives = 83/166 (50%), Gaps = 20/166 (12%)
 Frame = -1

Query: 550 MGSGSSRLGSRPCRPNRTKRTFSSIFICGASSPRRAIEMEDDPAEMLVGSAE---PAKLQ 380
           MGS SSRLGSR  RP R  R  SS+ ICG S+ R   E+ED PAE+LV + E   P  ++
Sbjct: 1   MGSSSSRLGSRSSRP-RLNRRLSSL-ICGGSTSRAQPEIEDCPAELLVNAIEHNDPVTVE 58

Query: 379 NSEKDLS-------PDFVPSQAERGASSASNLVNSEKSTSVDASSNVQGGNRRENSTTKD 221
            S    S         F  ++ E G SS S+    E ++ ++  SN++  NR +   ++ 
Sbjct: 59  QSSTKASHLASSAGTAFTSTRTETGTSSESSSAAREDTSFINDLSNIETSNRGK-CLSES 117

Query: 220 MELV---------TQYNPGRTRSET-ASTSWDDRSFPYPLSLNKRA 113
            EL+         +Q +P   RS   AS S+ D     P+S N RA
Sbjct: 118 KELIPPHLVSDEPSQVDPYWERSSNIASASFKDLHPLDPVSANARA 163


>emb|CAN78871.1| hypothetical protein VITISV_024970 [Vitis vinifera]
          Length = 542

 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 60/166 (36%), Positives = 85/166 (51%), Gaps = 20/166 (12%)
 Frame = -1

Query: 550 MGSGSSRLGSRPCRPNRTKRTFSSIFICGASSPRRAIEMEDDPAEMLVGSAE---PAKLQ 380
           MGS SSRLGSR  RP R  R  SS+ ICG S+ R   E+ED PAE+LV + E   P  ++
Sbjct: 1   MGSSSSRLGSRSSRP-RLNRRLSSL-ICGGSTSRAQPEIEDCPAELLVNAIEHNDPVTVE 58

Query: 379 NS---EKDLSPD----FVPSQAERGASSASNLVNSEKSTSVDASSNVQGGNRRENSTTKD 221
            S   E  L+      F  ++ E G SS S+    E ++ ++  SN++  NR +   ++ 
Sbjct: 59  QSSTKESHLASSAGTAFTSTRTETGTSSESSSAAREDTSFINDLSNIETSNRGK-CLSES 117

Query: 220 MELV---------TQYNPGRTRSET-ASTSWDDRSFPYPLSLNKRA 113
            EL+         +Q +P   RS   AS S+ D     P+S N RA
Sbjct: 118 KELIPPHLVSDEPSQVDPYWERSSNIASASFKDLHPLDPVSANARA 163


>ref|XP_004287233.1| PREDICTED: uncharacterized protein LOC101295849 [Fragaria vesca
           subsp. vesca]
          Length = 537

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 50/164 (30%), Positives = 72/164 (43%), Gaps = 18/164 (10%)
 Frame = -1

Query: 550 MGSGSSRLGSRPCRPNRTKRTFSSIFICGASSPRRAIEMEDDPAEMLVGSAEPAKLQNSE 371
           MGS SSRLGSRP RP R  R+  S  +CG SS R  +EMED  AE LV   E     N+ 
Sbjct: 1   MGSSSSRLGSRPSRP-RPNRSILSSLVCGGSSSRATLEMEDHQAECLVRHVEHCDRGNNP 59

Query: 370 KDLSPDFVPSQAERGA----------SSASNLVNSEKSTSVDASSNVQGGNRRENSTTKD 221
              S D     +  GA          SS+ ++    + T  +      G + +    ++ 
Sbjct: 60  VQNSTDVSSLISSTGAGFTFPNTEIGSSSQSVAPEGQGTYFEEGLRSFGTSNQGKCLSRS 119

Query: 220 MELVT--------QYNPGRTRSETASTSWDDRSFPYPLSLNKRA 113
            EL++             R  S  ASTS+ ++   + +S+N  A
Sbjct: 120 KELISHPVSAGCNHDESSRDNSTAASTSFKEQQSSHRVSVNSSA 163


>ref|XP_003549707.1| PREDICTED: uncharacterized protein DDB_G0271670-like [Glycine max]
          Length = 541

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 61/203 (30%), Positives = 92/203 (45%), Gaps = 22/203 (10%)
 Frame = -1

Query: 550 MGSGSSRLGSRPC----RPNRTKRTFSSIFICGASSPRRAIEMEDDPAEMLVGSAE--PA 389
           MGS SSRLGSRP       +R  R   S  +CG S+ R   +ME+  AE+ V SA     
Sbjct: 1   MGSSSSRLGSRPSSSSSHSHRVNRFRLSSLLCGTSTSRSVHQMEELSAELRVDSARDFDG 60

Query: 388 KLQNSEKDLSPDFVPSQAERGASSASNLVNSEK-----STSVDASSNVQGGNRRENSTTK 224
           ++Q   ++ S  +  ++      + +  ++  +     +TSV+ SS     N + N  ++
Sbjct: 61  EIQKDTEESSLSYTEARISSSRPAETATLSDMRTEFHGNTSVEGSSRNVATNSQRNCLSE 120

Query: 223 DMELVTQY--NPGRT-------RSETASTSWDDRSFPYPLSLNKRAXXXXXXXXXXXXXX 71
             ELV  Y  + G T        S TASTS+ ++    P+S+N  A              
Sbjct: 121 HEELVPPYQVSAGHTGHESYSDSSNTASTSFVEQQSSDPVSVNVSA-NKDLVNDVNNPVV 179

Query: 70  XXVSQVF--SGYSRSSSPLSHGN 8
             VSQV   +   RSS+P  HGN
Sbjct: 180 SDVSQVSHETMRPRSSTPQEHGN 202