BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00005902
         (536 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT38724.1| Putative retrotransposon protein, identical [Sola...   115   6e-24
gb|EOY26451.1| DNA/RNA polymerases superfamily protein [Theobrom...   113   2e-23
gb|EOY21678.1| DNA/RNA polymerases superfamily protein [Theobrom...   112   4e-23
gb|EOY08667.1| Retrotransposon protein, Ty3-gypsy subclass, puta...   112   4e-23
gb|EOY03326.1| DNA/RNA polymerases superfamily protein [Theobrom...   112   4e-23
gb|EOY21491.1| Retrotransposon protein, putative [Theobroma cacao]    112   5e-23
gb|EOY17291.1| Uncharacterized protein TCM_036439 [Theobroma cacao]   112   7e-23
gb|EOY14054.1| Uncharacterized protein TCM_033221 [Theobroma cacao]   112   7e-23
gb|EOY26390.1| Uncharacterized protein TCM_027940 [Theobroma cacao]   111   1e-22
gb|EOY13931.1| Uncharacterized protein TCM_032736 [Theobroma cacao]   110   2e-22
gb|EOY20280.1| Uncharacterized protein TCM_045699 [Theobroma cacao]   110   2e-22
gb|EOY19264.1| Uncharacterized protein TCM_044274 [Theobroma cacao]   110   2e-22
gb|EOY08813.1| Uncharacterized protein TCM_024023 [Theobroma cacao]   110   2e-22
gb|EOY19683.1| Uncharacterized protein TCM_044868 [Theobroma cacao]   109   3e-22
gb|EOX94130.1| DNA/RNA polymerases superfamily protein [Theobrom...   108   1e-21
gb|EOX99952.1| Uncharacterized protein TCM_009026 [Theobroma cacao]   107   1e-21
gb|EOY03218.1| Uncharacterized protein TCM_017880, partial [Theo...   107   2e-21
gb|EOY03078.1| Retrotransposon protein, putative [Theobroma cacao]    106   3e-21
gb|EOY03146.1| Retrotransposon protein, putative [Theobroma cacao]    104   1e-20
gb|AEV42258.1| hypothetical protein [Beta vulgaris]                   103   2e-20

>gb|AAT38724.1| Putative retrotransposon protein, identical [Solanum demissum]
          Length = 1602

 Score =  115 bits (288), Expect = 6e-24
 Identities = 66/140 (47%), Positives = 82/140 (58%), Gaps = 8/140 (5%)
 Frame = -1

Query: 527  NWIARKMSSMTVAITFSSQQMLYFRXXXXXXXXXXXLS--------SEMVVVHHVFHISI 372
            +W+  K+S M   + F  +  L  R            S         E+  VH VFHIS+
Sbjct: 1460 DWVYLKVSPMKGVMRFGKKGKLSPRYIGPYRIVQRVGSVAYELELPQELAAVHPVFHISM 1519

Query: 371  LRLYKSDPSHILSHEEIEINERLSYEEESMQILDRQVRRLRTKDIASGKVLWRNHNTKEI 192
            L+    DPS IL  E ++I + LSYEE  +QILDRQVRRLRTKD+AS KVLWRN   +E 
Sbjct: 1520 LKKCIGDPSLILPTESVKIKDNLSYEEVPVQILDRQVRRLRTKDVASVKVLWRNQFVEEA 1579

Query: 191  TWEAEKDMKK*YPNLFPIPG 132
            TWEAE+DMKK YP+LF   G
Sbjct: 1580 TWEAEEDMKKRYPHLFESGG 1599


>gb|EOY26451.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
          Length = 679

 Score =  113 bits (283), Expect = 2e-23
 Identities = 48/85 (56%), Positives = 70/85 (82%)
 Frame = -1

Query: 398 VHHVFHISILRLYKSDPSHILSHEEIEINERLSYEEESMQILDRQVRRLRTKDIASGKVL 219
           +H VFH+S+LR Y  DPSH++ +E I++ + LSYEE+ + ILDRQV++LR+KD+AS KVL
Sbjct: 593 IHPVFHVSMLRKYNLDPSHVIRYETIQLQDDLSYEEQPVAILDRQVKKLRSKDVASVKVL 652

Query: 218 WRNHNTKEITWEAEKDMKK*YPNLF 144
           WRNH ++E+TWEAE +M+  +P+LF
Sbjct: 653 WRNHTSEEVTWEAEDEMRTKHPHLF 677


>gb|EOY21678.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
          Length = 448

 Score =  112 bits (281), Expect = 4e-23
 Identities = 47/85 (55%), Positives = 70/85 (82%)
 Frame = -1

Query: 398 VHHVFHISILRLYKSDPSHILSHEEIEINERLSYEEESMQILDRQVRRLRTKDIASGKVL 219
           +H VFH+S+LR Y  DPSH++ +E I++ + L+YEE+ + ILDRQV++LR+KD+AS KVL
Sbjct: 362 IHPVFHVSMLRKYNPDPSHVIRYETIQLQDDLTYEEQPVAILDRQVKKLRSKDVASVKVL 421

Query: 218 WRNHNTKEITWEAEKDMKK*YPNLF 144
           WRNH ++E+TWEAE +M+  +P+LF
Sbjct: 422 WRNHTSEEVTWEAEDEMRTKHPHLF 446


>gb|EOY08667.1| Retrotransposon protein, Ty3-gypsy subclass, putative [Theobroma
           cacao]
          Length = 521

 Score =  112 bits (281), Expect = 4e-23
 Identities = 47/85 (55%), Positives = 70/85 (82%)
 Frame = -1

Query: 398 VHHVFHISILRLYKSDPSHILSHEEIEINERLSYEEESMQILDRQVRRLRTKDIASGKVL 219
           +H VFH+S+LR Y  DPSH++ +E I++ + L+YEE+ + ILDRQV++LR+KD+AS KVL
Sbjct: 435 IHPVFHVSMLRKYNPDPSHVIRYETIQLQDDLTYEEQPVAILDRQVKKLRSKDVASVKVL 494

Query: 218 WRNHNTKEITWEAEKDMKK*YPNLF 144
           WRNH ++E+TWEAE +M+  +P+LF
Sbjct: 495 WRNHTSEEVTWEAEDEMRTKHPHLF 519


>gb|EOY03326.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
          Length = 1447

 Score =  112 bits (281), Expect = 4e-23
 Identities = 47/85 (55%), Positives = 70/85 (82%)
 Frame = -1

Query: 398  VHHVFHISILRLYKSDPSHILSHEEIEINERLSYEEESMQILDRQVRRLRTKDIASGKVL 219
            +H VFH+S+LR Y  DPSH++ +E I++ + L+YEE+ + ILDRQV++LR+KD+AS KVL
Sbjct: 1361 IHPVFHVSMLRKYNPDPSHVIRYETIQLQDDLTYEEQPVAILDRQVKKLRSKDVASVKVL 1420

Query: 218  WRNHNTKEITWEAEKDMKK*YPNLF 144
            WRNH ++E+TWEAE +M+  +P+LF
Sbjct: 1421 WRNHTSEEVTWEAEDEMRTKHPHLF 1445


>gb|EOY21491.1| Retrotransposon protein, putative [Theobroma cacao]
          Length = 1145

 Score =  112 bits (280), Expect = 5e-23
 Identities = 48/85 (56%), Positives = 70/85 (82%)
 Frame = -1

Query: 398  VHHVFHISILRLYKSDPSHILSHEEIEINERLSYEEESMQILDRQVRRLRTKDIASGKVL 219
            +H VFH+SILR Y SDPSH++ +E I++N  L+YE++ + ILDRQV++L +K+IA  KVL
Sbjct: 1059 IHPVFHVSILRKYNSDPSHVIWYETIQLNNDLTYEKQPVAILDRQVKKLHSKEIALVKVL 1118

Query: 218  WRNHNTKEITWEAEKDMKK*YPNLF 144
            WRNH ++E+TWEAE++M+  YP+LF
Sbjct: 1119 WRNHTSEEVTWEAEEEMRTKYPHLF 1143


>gb|EOY17291.1| Uncharacterized protein TCM_036439 [Theobroma cacao]
          Length = 240

 Score =  112 bits (279), Expect = 7e-23
 Identities = 47/85 (55%), Positives = 69/85 (81%)
 Frame = -1

Query: 398 VHHVFHISILRLYKSDPSHILSHEEIEINERLSYEEESMQILDRQVRRLRTKDIASGKVL 219
           +H VFH+S+LR Y  DPSH++ +E I++   L+YEE+ + ILDRQV++LR+KD+AS KVL
Sbjct: 154 IHPVFHVSMLRKYNPDPSHVIRYETIQLQNDLTYEEQPVAILDRQVKKLRSKDVASVKVL 213

Query: 218 WRNHNTKEITWEAEKDMKK*YPNLF 144
           WRNH ++E+TWEAE +M+  +P+LF
Sbjct: 214 WRNHTSEEVTWEAEDEMRTKHPHLF 238


>gb|EOY14054.1| Uncharacterized protein TCM_033221 [Theobroma cacao]
          Length = 207

 Score =  112 bits (279), Expect = 7e-23
 Identities = 47/85 (55%), Positives = 69/85 (81%)
 Frame = -1

Query: 398 VHHVFHISILRLYKSDPSHILSHEEIEINERLSYEEESMQILDRQVRRLRTKDIASGKVL 219
           +H VFH+S+LR Y  DPSH++ +E I++   L+YEE+ + ILDRQV++LR+KD+AS KVL
Sbjct: 121 IHPVFHVSMLRKYNPDPSHVIRYETIQLQNDLTYEEQPVAILDRQVKKLRSKDVASVKVL 180

Query: 218 WRNHNTKEITWEAEKDMKK*YPNLF 144
           WRNH ++E+TWEAE +M+  +P+LF
Sbjct: 181 WRNHTSEEVTWEAEDEMRTKHPHLF 205


>gb|EOY26390.1| Uncharacterized protein TCM_027940 [Theobroma cacao]
          Length = 1052

 Score =  111 bits (277), Expect = 1e-22
 Identities = 46/85 (54%), Positives = 70/85 (82%)
 Frame = -1

Query: 398  VHHVFHISILRLYKSDPSHILSHEEIEINERLSYEEESMQILDRQVRRLRTKDIASGKVL 219
            +H VFH+S+LR Y  DPSH++ +E I++ + L+YEE+ + ILDRQV++LR+KD+AS KVL
Sbjct: 966  IHPVFHVSMLRKYNPDPSHVIRYETIQLQDDLTYEEQPVAILDRQVKKLRSKDVASVKVL 1025

Query: 218  WRNHNTKEITWEAEKDMKK*YPNLF 144
            W+NH ++E+TWEAE +M+  +P+LF
Sbjct: 1026 WQNHTSEEVTWEAEDEMRTKHPHLF 1050


>gb|EOY13931.1| Uncharacterized protein TCM_032736 [Theobroma cacao]
          Length = 293

 Score =  110 bits (276), Expect = 2e-22
 Identities = 46/85 (54%), Positives = 68/85 (80%)
 Frame = -1

Query: 398 VHHVFHISILRLYKSDPSHILSHEEIEINERLSYEEESMQILDRQVRRLRTKDIASGKVL 219
           +H VFH+S+LR Y  DPSH++ +E I++   L+YEE+ + ILDRQV++LR+KD+AS KVL
Sbjct: 207 IHPVFHVSMLRKYNPDPSHVIQYETIQLQNDLTYEEQPVAILDRQVKKLRSKDVASVKVL 266

Query: 218 WRNHNTKEITWEAEKDMKK*YPNLF 144
           WRNH ++E+TWE E +M+  +P+LF
Sbjct: 267 WRNHTSEEVTWEVEDEMRTKHPHLF 291


>gb|EOY20280.1| Uncharacterized protein TCM_045699 [Theobroma cacao]
          Length = 415

 Score =  110 bits (275), Expect = 2e-22
 Identities = 46/85 (54%), Positives = 69/85 (81%)
 Frame = -1

Query: 398 VHHVFHISILRLYKSDPSHILSHEEIEINERLSYEEESMQILDRQVRRLRTKDIASGKVL 219
           +H VFH+S+LR Y  DPSH++ +E I++   L+YEE+ + ILDRQV++LR+KD+AS KVL
Sbjct: 329 IHPVFHVSMLRKYNPDPSHVIRYETIQLQNDLTYEEQPVAILDRQVKKLRSKDVASVKVL 388

Query: 218 WRNHNTKEITWEAEKDMKK*YPNLF 144
           W+NH ++E+TWEAE +M+  +P+LF
Sbjct: 389 WQNHTSEEVTWEAEDEMRTKHPHLF 413


>gb|EOY19264.1| Uncharacterized protein TCM_044274 [Theobroma cacao]
          Length = 860

 Score =  110 bits (275), Expect = 2e-22
 Identities = 46/85 (54%), Positives = 69/85 (81%)
 Frame = -1

Query: 398  VHHVFHISILRLYKSDPSHILSHEEIEINERLSYEEESMQILDRQVRRLRTKDIASGKVL 219
            +H VFH+S+LR Y  DPSH++ +E I++   L+YEE+ + ILDRQV++LR+KD+AS KVL
Sbjct: 774  IHPVFHVSMLRKYNPDPSHVIRYETIQLQNDLTYEEQPVAILDRQVKKLRSKDVASVKVL 833

Query: 218  WRNHNTKEITWEAEKDMKK*YPNLF 144
            WRNH ++E+TWEA+ +M+  +P+LF
Sbjct: 834  WRNHTSEEVTWEAKDEMRTKHPHLF 858


>gb|EOY08813.1| Uncharacterized protein TCM_024023 [Theobroma cacao]
          Length = 207

 Score =  110 bits (275), Expect = 2e-22
 Identities = 46/85 (54%), Positives = 69/85 (81%)
 Frame = -1

Query: 398 VHHVFHISILRLYKSDPSHILSHEEIEINERLSYEEESMQILDRQVRRLRTKDIASGKVL 219
           +H VFH+S+LR Y  DPSH++ +E I++ + L+YEE+ + ILDRQV++LR+KD+A  KVL
Sbjct: 121 IHPVFHVSMLRKYNPDPSHVIRYETIQLQDDLTYEEQPVAILDRQVKKLRSKDVALVKVL 180

Query: 218 WRNHNTKEITWEAEKDMKK*YPNLF 144
           WRNH ++E+TWEAE +M+  +P+LF
Sbjct: 181 WRNHTSEEVTWEAEDEMRTKHPHLF 205


>gb|EOY19683.1| Uncharacterized protein TCM_044868 [Theobroma cacao]
          Length = 403

 Score =  109 bits (273), Expect = 3e-22
 Identities = 46/85 (54%), Positives = 69/85 (81%)
 Frame = -1

Query: 398 VHHVFHISILRLYKSDPSHILSHEEIEINERLSYEEESMQILDRQVRRLRTKDIASGKVL 219
           +H VFH+S+LR Y  DPSH++ +E I++ + L+YEE+ + ILDRQV++LR+KD+AS KVL
Sbjct: 317 IHPVFHVSMLRKYNPDPSHVIRYETIQLQDDLTYEEQPVAILDRQVKKLRSKDVASVKVL 376

Query: 218 WRNHNTKEITWEAEKDMKK*YPNLF 144
           W NH ++E+TWEAE +M+  +P+LF
Sbjct: 377 WWNHTSEEVTWEAEDEMRTKHPHLF 401


>gb|EOX94130.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
          Length = 1401

 Score =  108 bits (269), Expect = 1e-21
 Identities = 46/85 (54%), Positives = 67/85 (78%)
 Frame = -1

Query: 398  VHHVFHISILRLYKSDPSHILSHEEIEINERLSYEEESMQILDRQVRRLRTKDIASGKVL 219
            +H VFH+S+LR Y  DPSH++ +E I+    L+YEE+ + ILDRQV++LR+KD+A  KVL
Sbjct: 1315 IHPVFHVSMLRKYNPDPSHVIRYETIQSQNDLTYEEQPVAILDRQVKKLRSKDVALVKVL 1374

Query: 218  WRNHNTKEITWEAEKDMKK*YPNLF 144
            WRNH ++E+TWEAE +M+  +P+LF
Sbjct: 1375 WRNHTSEEVTWEAEDEMRTKHPHLF 1399


>gb|EOX99952.1| Uncharacterized protein TCM_009026 [Theobroma cacao]
          Length = 162

 Score =  107 bits (268), Expect = 1e-21
 Identities = 44/85 (51%), Positives = 69/85 (81%)
 Frame = -1

Query: 398 VHHVFHISILRLYKSDPSHILSHEEIEINERLSYEEESMQILDRQVRRLRTKDIASGKVL 219
           +H +FH+S+LR Y  DPSH++ +E I++ + L+YEE+ + ILDRQV++LR K++A  KVL
Sbjct: 76  IHPMFHVSMLRKYNPDPSHVIRYETIQLQDDLTYEEQPIAILDRQVKKLRLKEVALVKVL 135

Query: 218 WRNHNTKEITWEAEKDMKK*YPNLF 144
           W++H +KE+TWEAE++M+  YP+LF
Sbjct: 136 WQDHTSKEVTWEAEEEMRTKYPHLF 160


>gb|EOY03218.1| Uncharacterized protein TCM_017880, partial [Theobroma cacao]
          Length = 218

 Score =  107 bits (266), Expect = 2e-21
 Identities = 44/78 (56%), Positives = 65/78 (83%)
 Frame = -1

Query: 398 VHHVFHISILRLYKSDPSHILSHEEIEINERLSYEEESMQILDRQVRRLRTKDIASGKVL 219
           +H VFH+S+LR Y  DPSH++ +E I++ + L+YEE+ + ILDRQV++LR+KD+AS KVL
Sbjct: 139 IHPVFHVSMLRKYNPDPSHVIRYETIQLQDDLTYEEQPVAILDRQVKKLRSKDVASVKVL 198

Query: 218 WRNHNTKEITWEAEKDMK 165
           WRNH ++E+TWEAE +M+
Sbjct: 199 WRNHTSEEVTWEAEDEMR 216


>gb|EOY03078.1| Retrotransposon protein, putative [Theobroma cacao]
          Length = 1263

 Score =  106 bits (265), Expect = 3e-21
 Identities = 45/85 (52%), Positives = 68/85 (80%)
 Frame = -1

Query: 398  VHHVFHISILRLYKSDPSHILSHEEIEINERLSYEEESMQILDRQVRRLRTKDIASGKVL 219
            +H VF +S+LR Y  DPSH++ +E I++ + L+YEE+ + ILDRQV++LR+KD+AS KVL
Sbjct: 1177 IHPVFQVSMLRKYNPDPSHVIWYETIQLQDDLTYEEQPVAILDRQVKKLRSKDVASVKVL 1236

Query: 218  WRNHNTKEITWEAEKDMKK*YPNLF 144
            WRNH ++E+TWEAE +M+  +P+ F
Sbjct: 1237 WRNHTSEEVTWEAEDEMRTKHPHQF 1261


>gb|EOY03146.1| Retrotransposon protein, putative [Theobroma cacao]
          Length = 1480

 Score =  104 bits (259), Expect = 1e-20
 Identities = 44/85 (51%), Positives = 68/85 (80%)
 Frame = -1

Query: 398  VHHVFHISILRLYKSDPSHILSHEEIEINERLSYEEESMQILDRQVRRLRTKDIASGKVL 219
            ++ VFH+S+LR Y  DPSH++ +E I++   L+YEE+ + ILDRQV++L +KD+AS KVL
Sbjct: 1394 IYPVFHVSMLRKYNPDPSHVIRYETIQLQNDLTYEEQPVAILDRQVKKLCSKDVASVKVL 1453

Query: 218  WRNHNTKEITWEAEKDMKK*YPNLF 144
            WRN+ ++E+TWEAE +M+  +P+LF
Sbjct: 1454 WRNYTSEEVTWEAEDEMRTKHPHLF 1478


>gb|AEV42258.1| hypothetical protein [Beta vulgaris]
          Length = 1553

 Score =  103 bits (258), Expect = 2e-20
 Identities = 50/85 (58%), Positives = 61/85 (71%)
 Frame = -1

Query: 398  VHHVFHISILRLYKSDPSHILSHEEIEINERLSYEEESMQILDRQVRRLRTKDIASGKVL 219
            VH+VFH+S LR Y  D SH+L  E +EI+E LSYEE+ +QILDR+VR  R KD+   KVL
Sbjct: 1437 VHNVFHVSQLRRYVPDASHVLEPENVEIDETLSYEEKPVQILDRKVRSTRNKDVRIVKVL 1496

Query: 218  WRNHNTKEITWEAEKDMKK*YPNLF 144
            WRN  T+E TWEAE  M+  YP LF
Sbjct: 1497 WRNQTTEEATWEAEDAMRLKYPELF 1521