BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00005823
         (1337 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006344217.1| PREDICTED: pentatricopeptide repeat-containi...   704   0.0  
ref|XP_004238857.1| PREDICTED: pentatricopeptide repeat-containi...   691   0.0  
ref|XP_002280443.1| PREDICTED: pentatricopeptide repeat-containi...   528   e-147
ref|XP_004298459.1| PREDICTED: pentatricopeptide repeat-containi...   525   e-146
ref|XP_004161997.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   519   e-144
ref|XP_004150483.1| PREDICTED: pentatricopeptide repeat-containi...   519   e-144
ref|XP_006468828.1| PREDICTED: pentatricopeptide repeat-containi...   511   e-142
ref|XP_006448295.1| hypothetical protein CICLE_v10014876mg [Citr...   511   e-142
gb|ACP39954.1| pentatricopeptide repeat protein [Gossypium hirsu...   508   e-141
gb|EXB65620.1| hypothetical protein L484_025886 [Morus notabilis]     505   e-140
ref|XP_002315895.2| hypothetical protein POPTR_0010s12490g [Popu...   499   e-138
gb|EOY00910.1| Pentatricopeptide repeat-containing protein, puta...   498   e-138
ref|XP_002888819.1| pentatricopeptide repeat-containing protein ...   495   e-137
ref|XP_006301573.1| hypothetical protein CARUB_v10022011mg [Caps...   492   e-136
ref|XP_002531063.1| pentatricopeptide repeat-containing protein,...   491   e-136
ref|NP_177262.1| pentatricopeptide repeat-containing protein [Ar...   490   e-136
ref|XP_006390810.1| hypothetical protein EUTSA_v10018364mg [Eutr...   488   e-135
gb|ESW15022.1| hypothetical protein PHAVU_007G037500g [Phaseolus...   474   e-131
ref|XP_003535704.1| PREDICTED: pentatricopeptide repeat-containi...   473   e-131
ref|XP_006605955.1| PREDICTED: pentatricopeptide repeat-containi...   463   e-128

>ref|XP_006344217.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
            mitochondrial-like [Solanum tuberosum]
          Length = 531

 Score =  704 bits (1817), Expect = 0.0
 Identities = 361/453 (79%), Positives = 387/453 (85%), Gaps = 19/453 (4%)
 Frame = +2

Query: 32   MNLRQSLSRIPTT---LIPSLHN---PTKNTHQIHKLLSFSQIHYXXXXXXXXXXXXXXX 193
            M  R  LSRIP T   LIPSLH+   P KN  QIHKL+SF +I                 
Sbjct: 1    MAFRGFLSRIPKTSKTLIPSLHSSKKPIKNGPQIHKLISFFRISTGNSSNTTSLPLNRSI 60

Query: 194  XY-------------PKYPEITQEAEKICKKLLKNSNIGDALSSAKVNVSPLLVNEVIKK 334
             Y             P+ PEI QEAE+ICK LLKN+++ DALSSA VNVSPLLV EVIKK
Sbjct: 61   HYDSVKNTHLNSNPNPQNPEIIQEAERICKILLKNTDVADALSSASVNVSPLLVIEVIKK 120

Query: 335  LNNSGVLALSFFRWAEKQNGLNHSAESYHGLIEALGKIKQFKMVWILVDELKNKGLLCKD 514
            L+NSG+LALSFFRWAEKQNG  H+AESYHGLIEALGKIKQFKMVWILV+ELKNKGLLCK+
Sbjct: 121  LSNSGILALSFFRWAEKQNGFVHTAESYHGLIEALGKIKQFKMVWILVNELKNKGLLCKE 180

Query: 515  AFALVSRRYARARKVKEAIEAFERMEKYGLVHELQDFNRLLDTLCKSRQVGNAQDVFDKW 694
            AFALVSRR+ARARKVKEAIEAFE+MEKYGL+HELQDFNRL DTL KSR VGNAQ+VFDKW
Sbjct: 181  AFALVSRRFARARKVKEAIEAFEKMEKYGLIHELQDFNRLFDTLSKSRHVGNAQEVFDKW 240

Query: 695  KNRKFKPNIKSYTILLEGWGQEKNLLRLNEVYREMEGDGIEPDVVSYGIMIHAHCKVKKY 874
            KNRKF PNIKSYTILLEGWGQEKNLLRLNEVYREM  DGIEPDVVSYGIMIHAHCKVKKY
Sbjct: 241  KNRKFTPNIKSYTILLEGWGQEKNLLRLNEVYREMMADGIEPDVVSYGIMIHAHCKVKKY 300

Query: 875  DEAIELLCELERKKIKVTPHVYCTLINGLGSEKRLDEANKYFELYKGSGFELEVFTFNAM 1054
            DEAIELL E+ERKKIKVTPHVYCTLINGLGSEKRL  A KYFELYKGSGF+LEVFT+NAM
Sbjct: 301  DEAIELLHEMERKKIKVTPHVYCTLINGLGSEKRLVLALKYFELYKGSGFDLEVFTYNAM 360

Query: 1055 VGAYCWSMRMDDAYKLVDEMRRCKIGPNTRTYDIILHHLIKARRMNEAYSMFQKVSNDFG 1234
            VGAYCWS+ MDDAY+LVDEMRRCKIGPNTRTYDIILHHLIKARRM+EAY+MFQK+SND G
Sbjct: 361  VGAYCWSLCMDDAYRLVDEMRRCKIGPNTRTYDIILHHLIKARRMSEAYTMFQKMSNDPG 420

Query: 1235 CEPTVSTYEIMVRMFCNEDRTDMALRVWDQMKA 1333
            CEPTVSTYEIMVRMFCNEDRTDMALRVWD+MKA
Sbjct: 421  CEPTVSTYEIMVRMFCNEDRTDMALRVWDKMKA 453



 Score = 76.3 bits (186), Expect = 3e-11
 Identities = 61/325 (18%), Positives = 133/325 (40%), Gaps = 37/325 (11%)
 Frame = +2

Query: 356  ALSFFRWAEKQNGLNHSAESYHGLIEALGKIKQFKMVWILVDELKNKGLLCK-DAFALVS 532
            A+  F   EK  GL H  + ++ L + L K +       + D+ KN+       ++ ++ 
Sbjct: 198  AIEAFEKMEKY-GLIHELQDFNRLFDTLSKSRHVGNAQEVFDKWKNRKFTPNIKSYTILL 256

Query: 533  RRYARARKVKEAIEAFERMEKYGLVHELQDFNRLLDTLCKSRQVGNAQDVFDKWKNRKFK 712
              + + + +    E +  M   G+  ++  +  ++   CK ++   A ++  + + +K K
Sbjct: 257  EGWGQEKNLLRLNEVYREMMADGIEPDVVSYGIMIHAHCKVKKYDEAIELLHEMERKKIK 316

Query: 713  PNIKSYTILLEGWGQEKNLLRLNEVYREMEGDGIEPDVVSYGIMIHAHCKVKKYDEAIEL 892
                 Y  L+ G G EK L+   + +   +G G + +V +Y  M+ A+C     D+A  L
Sbjct: 317  VTPHVYCTLINGLGSEKRLVLALKYFELYKGSGFDLEVFTYNAMVGAYCWSLCMDDAYRL 376

Query: 893  LCELERKKIKVTPHVYCTLINGLGSEKRLDEANKYFELY--------------------- 1009
            + E+ R KI      Y  +++ L   +R+ EA   F+                       
Sbjct: 377  VDEMRRCKIGPNTRTYDIILHHLIKARRMSEAYTMFQKMSNDPGCEPTVSTYEIMVRMFC 436

Query: 1010 ---------------KGSGFELEVFTFNAMVGAYCWSMRMDDAYKLVDEMRRCKIGPNTR 1144
                           K +G    + +F+ ++ ++C   ++DDA +   EM    + P   
Sbjct: 437  NEDRTDMALRVWDKMKANGVLPGMHSFSTLINSFCRENKLDDACRYFQEMLDMGMRPPIP 496

Query: 1145 TYDIILHHLIKARRMNEAYSMFQKV 1219
             +D +   L+   + +   ++++K+
Sbjct: 497  LFDNLKRALLDEGKEDTVKALWRKL 521


>ref|XP_004238857.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
            mitochondrial-like [Solanum lycopersicum]
          Length = 521

 Score =  691 bits (1783), Expect = 0.0
 Identities = 350/445 (78%), Positives = 381/445 (85%), Gaps = 11/445 (2%)
 Frame = +2

Query: 32   MNLRQSLSRIPTTLIPSLHNPTKNTHQIHKLLSFSQIHYXXXXXXXXXXXXXXXXY---- 199
            M   + LS IP TLI       KN  QIHKL+SF ++                  +    
Sbjct: 1    MGSHRFLSYIPKTLISK--KTIKNGPQIHKLISFFRMSAGNTSTTTSLLLNRSIHHDSVK 58

Query: 200  -------PKYPEITQEAEKICKKLLKNSNIGDALSSAKVNVSPLLVNEVIKKLNNSGVLA 358
                   P+ PEI QEAE+ICK LLKN+N+ DALSS  VNVSPLLVNEVIKKL+NSG+LA
Sbjct: 59   NTHLNSNPQNPEIIQEAERICKILLKNTNVADALSSTSVNVSPLLVNEVIKKLSNSGILA 118

Query: 359  LSFFRWAEKQNGLNHSAESYHGLIEALGKIKQFKMVWILVDELKNKGLLCKDAFALVSRR 538
            LSFFRWAEKQNG  H+AESYHGLIEALGKIKQFKMVWILV+ELK KGLLC++AFALVSRR
Sbjct: 119  LSFFRWAEKQNGFVHTAESYHGLIEALGKIKQFKMVWILVNELKTKGLLCREAFALVSRR 178

Query: 539  YARARKVKEAIEAFERMEKYGLVHELQDFNRLLDTLCKSRQVGNAQDVFDKWKNRKFKPN 718
            +ARARKVKEAIEAFERMEKYGL+HELQDFNRLLDTL KSR VGNAQ+VFDKWKNRKFKPN
Sbjct: 179  FARARKVKEAIEAFERMEKYGLIHELQDFNRLLDTLSKSRHVGNAQEVFDKWKNRKFKPN 238

Query: 719  IKSYTILLEGWGQEKNLLRLNEVYREMEGDGIEPDVVSYGIMIHAHCKVKKYDEAIELLC 898
            IKSYTILLEGWGQEKNLLRLNEVYREM  DGIEPDVVSYGIMIHAHCKVKKYDEAIELL 
Sbjct: 239  IKSYTILLEGWGQEKNLLRLNEVYREMMADGIEPDVVSYGIMIHAHCKVKKYDEAIELLH 298

Query: 899  ELERKKIKVTPHVYCTLINGLGSEKRLDEANKYFELYKGSGFELEVFTFNAMVGAYCWSM 1078
            E+ERKKIKVTPHVYCTLINGLGSEKRL  A KYF+LYKGSGF+LEVFT+NAMVGAYCWS+
Sbjct: 299  EMERKKIKVTPHVYCTLINGLGSEKRLVLALKYFKLYKGSGFDLEVFTYNAMVGAYCWSL 358

Query: 1079 RMDDAYKLVDEMRRCKIGPNTRTYDIILHHLIKARRMNEAYSMFQKVSNDFGCEPTVSTY 1258
             MDDAY+LVDEMRRCKIGPNTRTYDIILHHLIKARRM+EAY++FQK+SND GCEPTVSTY
Sbjct: 359  CMDDAYRLVDEMRRCKIGPNTRTYDIILHHLIKARRMSEAYTVFQKMSNDPGCEPTVSTY 418

Query: 1259 EIMVRMFCNEDRTDMALRVWDQMKA 1333
            EIMVRMFCNE+RTDMAL+VWD+MKA
Sbjct: 419  EIMVRMFCNEERTDMALKVWDKMKA 443



 Score = 78.2 bits (191), Expect = 7e-12
 Identities = 62/325 (19%), Positives = 137/325 (42%), Gaps = 37/325 (11%)
 Frame = +2

Query: 356  ALSFFRWAEKQNGLNHSAESYHGLIEALGKIKQFKMVWILVDELKNKGLLCK-DAFALVS 532
            A+  F   EK  GL H  + ++ L++ L K +       + D+ KN+       ++ ++ 
Sbjct: 188  AIEAFERMEKY-GLIHELQDFNRLLDTLSKSRHVGNAQEVFDKWKNRKFKPNIKSYTILL 246

Query: 533  RRYARARKVKEAIEAFERMEKYGLVHELQDFNRLLDTLCKSRQVGNAQDVFDKWKNRKFK 712
              + + + +    E +  M   G+  ++  +  ++   CK ++   A ++  + + +K K
Sbjct: 247  EGWGQEKNLLRLNEVYREMMADGIEPDVVSYGIMIHAHCKVKKYDEAIELLHEMERKKIK 306

Query: 713  PNIKSYTILLEGWGQEKNLLRLNEVYREMEGDGIEPDVVSYGIMIHAHCKVKKYDEAIEL 892
                 Y  L+ G G EK L+   + ++  +G G + +V +Y  M+ A+C     D+A  L
Sbjct: 307  VTPHVYCTLINGLGSEKRLVLALKYFKLYKGSGFDLEVFTYNAMVGAYCWSLCMDDAYRL 366

Query: 893  LCELERKKIKVTPHVYCTLINGL------------------------------------G 964
            + E+ R KI      Y  +++ L                                     
Sbjct: 367  VDEMRRCKIGPNTRTYDIILHHLIKARRMSEAYTVFQKMSNDPGCEPTVSTYEIMVRMFC 426

Query: 965  SEKRLDEANKYFELYKGSGFELEVFTFNAMVGAYCWSMRMDDAYKLVDEMRRCKIGPNTR 1144
            +E+R D A K ++  K +G    + +F+ ++ ++C   ++DDA +   EM    + P   
Sbjct: 427  NEERTDMALKVWDKMKANGVLPGMHSFSTLINSFCRESKLDDACRYFQEMLDMGMRPPIP 486

Query: 1145 TYDIILHHLIKARRMNEAYSMFQKV 1219
             +D +   L+   + +   ++++K+
Sbjct: 487  LFDNLKRALLDEGKEDIVKALWRKL 511


>ref|XP_002280443.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
            mitochondrial [Vitis vinifera]
          Length = 531

 Score =  528 bits (1360), Expect = e-147
 Identities = 255/376 (67%), Positives = 313/376 (83%), Gaps = 2/376 (0%)
 Frame = +2

Query: 215  ITQEAEKICKKLL--KNSNIGDALSSAKVNVSPLLVNEVIKKLNNSGVLALSFFRWAEKQ 388
            I Q+  K+CK L    NS+I   L+ A V+VSP LV EV+KKL+NSGV+ALSFFRWAEKQ
Sbjct: 79   IAQDTGKLCKLLCTHSNSSIESLLNGASVDVSPTLVLEVLKKLSNSGVIALSFFRWAEKQ 138

Query: 389  NGLNHSAESYHGLIEALGKIKQFKMVWILVDELKNKGLLCKDAFALVSRRYARARKVKEA 568
             G  +S E+Y+ LIEALGKIKQFKM+W LV+++++KGLL ++ FAL+SRRYARARKVKEA
Sbjct: 139  KGFKYSTENYNALIEALGKIKQFKMIWNLVNDMRSKGLLTQETFALISRRYARARKVKEA 198

Query: 569  IEAFERMEKYGLVHELQDFNRLLDTLCKSRQVGNAQDVFDKWKNRKFKPNIKSYTILLEG 748
            +E FE+MEK+GL   L DFNRLLD LCKSR V  AQ+VFDK K+RKF+P+IKSYTILLEG
Sbjct: 199  VETFEKMEKFGLQPVLSDFNRLLDALCKSRHVERAQEVFDKMKDRKFRPDIKSYTILLEG 258

Query: 749  WGQEKNLLRLNEVYREMEGDGIEPDVVSYGIMIHAHCKVKKYDEAIELLCELERKKIKVT 928
            WGQE+NLLRL+EVYREM+ +G EPD V+YGI+I+AHCK ++YD A+EL  ++E  K   T
Sbjct: 259  WGQEQNLLRLDEVYREMKDEGFEPDAVTYGILINAHCKARRYDAAVELFHKMEANKCMPT 318

Query: 929  PHVYCTLINGLGSEKRLDEANKYFELYKGSGFELEVFTFNAMVGAYCWSMRMDDAYKLVD 1108
            PH+YCTLINGLGSE+RL EA ++FE  K SGF  E  T+NA+VG+YC SMRMDDAY++VD
Sbjct: 319  PHIYCTLINGLGSERRLTEALQFFERSKASGFTPEAPTYNAVVGSYCQSMRMDDAYRIVD 378

Query: 1109 EMRRCKIGPNTRTYDIILHHLIKARRMNEAYSMFQKVSNDFGCEPTVSTYEIMVRMFCNE 1288
            EMR+C +GP TRTYDIILHHLIKARR  EAY +FQ +S++ GCEP+VSTYEI+VRMFCNE
Sbjct: 379  EMRKCGVGPQTRTYDIILHHLIKARRTKEAYRVFQGMSSEPGCEPSVSTYEIVVRMFCNE 438

Query: 1289 DRTDMALRVWDQMKAK 1336
            +R DMALRVWD+MKAK
Sbjct: 439  ERVDMALRVWDEMKAK 454



 Score = 87.4 bits (215), Expect = 1e-14
 Identities = 58/211 (27%), Positives = 103/211 (48%), Gaps = 5/211 (2%)
 Frame = +2

Query: 383  KQNGLNHSAESYHGLIEALGKIKQFKMVWILVDELK-NKGLLCKDAFALVSRRYARARKV 559
            K  G    A +Y  LI A  K +++     L  +++ NK +     +  +       R++
Sbjct: 276  KDEGFEPDAVTYGILINAHCKARRYDAAVELFHKMEANKCMPTPHIYCTLINGLGSERRL 335

Query: 560  KEAIEAFERMEKYGLVHELQDFNRLLDTLCKSRQVGNAQDVFDKWKNRKFKPNIKSYTIL 739
             EA++ FER +  G   E   +N ++ + C+S ++ +A  + D+ +     P  ++Y I+
Sbjct: 336  TEALQFFERSKASGFTPEAPTYNAVVGSYCQSMRMDDAYRIVDEMRKCGVGPQTRTYDII 395

Query: 740  LEGWGQEKNLLRLNEVYREMEG----DGIEPDVVSYGIMIHAHCKVKKYDEAIELLCELE 907
            L    + +   R  E YR  +G     G EP V +Y I++   C  ++ D A+ +  E++
Sbjct: 396  LHHLIKAR---RTKEAYRVFQGMSSEPGCEPSVSTYEIVVRMFCNEERVDMALRVWDEMK 452

Query: 908  RKKIKVTPHVYCTLINGLGSEKRLDEANKYF 1000
             K +    H++ TLIN L  E +LDEA KYF
Sbjct: 453  AKGVLPGMHMFSTLINSLCYENKLDEACKYF 483



 Score = 73.6 bits (179), Expect = 2e-10
 Identities = 61/283 (21%), Positives = 127/283 (44%), Gaps = 13/283 (4%)
 Frame = +2

Query: 410  ESYHGLIEALGKIKQFKMVWILVDELKNKGLLCKDA--FALVSRRYARARKVKEAIEAFE 583
            +SY  L+E  G+ +    +  +  E+K++G    DA  + ++   + +AR+   A+E F 
Sbjct: 250  KSYTILLEGWGQEQNLLRLDEVYREMKDEGFE-PDAVTYGILINAHCKARRYDAAVELFH 308

Query: 584  RMEKYGLVHELQDFNRLLDTLCKSRQVGNAQDVFDKWKNRKFKPNIKSYTILLEGWGQEK 763
            +ME    +     +  L++ L   R++  A   F++ K   F P   +Y  ++  + Q  
Sbjct: 309  KMEANKCMPTPHIYCTLINGLGSERRLTEALQFFERSKASGFTPEAPTYNAVVGSYCQS- 367

Query: 764  NLLRLNEVYR---EMEGDGIEPDVVSYGIMIHAHCKVKKYDEAIELL--------CELER 910
              +R+++ YR   EM   G+ P   +Y I++H   K ++  EA  +         CE   
Sbjct: 368  --MRMDDAYRIVDEMRKCGVGPQTRTYDIILHHLIKARRTKEAYRVFQGMSSEPGCEPSV 425

Query: 911  KKIKVTPHVYCTLINGLGSEKRLDEANKYFELYKGSGFELEVFTFNAMVGAYCWSMRMDD 1090
               ++   ++C       +E+R+D A + ++  K  G    +  F+ ++ + C+  ++D+
Sbjct: 426  STYEIVVRMFC-------NEERVDMALRVWDEMKAKGVLPGMHMFSTLINSLCYENKLDE 478

Query: 1091 AYKLVDEMRRCKIGPNTRTYDIILHHLIKARRMNEAYSMFQKV 1219
            A K   EM    I P    +  +   L+   + +    + QK+
Sbjct: 479  ACKYFHEMLDMGIRPPAAMFSNLKQTLLDEGKQDMVLILAQKL 521


>ref|XP_004298459.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
            mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 515

 Score =  525 bits (1351), Expect = e-146
 Identities = 265/442 (59%), Positives = 329/442 (74%), Gaps = 5/442 (1%)
 Frame = +2

Query: 26   PKMNLRQSLSRIPTTLIPSL--HNPTKNTHQIHKLLSFSQIHYXXXXXXXXXXXXXXXXY 199
            P      S +R+PT L PSL  +     T    ++L  +  H+                 
Sbjct: 17   PFFRFSNSQTRLPTNLDPSLSFYRTIHGTLYKTQVLDEANTHH----------------- 59

Query: 200  PKYPEITQEAEKICKKLL---KNSNIGDALSSAKVNVSPLLVNEVIKKLNNSGVLALSFF 370
                 IT EAEKI K L     NS I   L+ A V VSP LV EV+KKLNN+G LALSFF
Sbjct: 60   -----ITFEAEKISKILSTPNSNSPIDSLLAGASVKVSPTLVVEVLKKLNNAGALALSFF 114

Query: 371  RWAEKQNGLNHSAESYHGLIEALGKIKQFKMVWILVDELKNKGLLCKDAFALVSRRYARA 550
            RWA+KQ G  H  ESY+ LIEALGKIKQFK++W LV+E+ N+GLL KD FAL+SRRYARA
Sbjct: 115  RWAQKQKGFKHCTESYNALIEALGKIKQFKIIWDLVNEMNNEGLLSKDTFALISRRYARA 174

Query: 551  RKVKEAIEAFERMEKYGLVHELQDFNRLLDTLCKSRQVGNAQDVFDKWKNRKFKPNIKSY 730
            R+V +AI+AFE+MEK+G+  E  DFNRL+DTL KSRQV  AQ+VFD+ K R+FKP+IKSY
Sbjct: 175  RRVSDAIKAFEKMEKFGIKLEGSDFNRLIDTLSKSRQVEKAQEVFDEMKQRRFKPDIKSY 234

Query: 731  TILLEGWGQEKNLLRLNEVYREMEGDGIEPDVVSYGIMIHAHCKVKKYDEAIELLCELER 910
            TILLEGWGQ++N LRL+EVYREM+ +G +PDVV+YGI+I+AHCK KKY+E I L  E+E 
Sbjct: 235  TILLEGWGQQQNFLRLDEVYREMKAEGFDPDVVTYGILINAHCKAKKYNEVIGLFREMEA 294

Query: 911  KKIKVTPHVYCTLINGLGSEKRLDEANKYFELYKGSGFELEVFTFNAMVGAYCWSMRMDD 1090
            K ++ +PH++C LINGLGSEKRL EA ++FE +K SG E E  T+NA+VGAYCWSMRM D
Sbjct: 295  KNVRPSPHIFCMLINGLGSEKRLAEALEFFERFKASGLEAEAPTYNAVVGAYCWSMRMSD 354

Query: 1091 AYKLVDEMRRCKIGPNTRTYDIILHHLIKARRMNEAYSMFQKVSNDFGCEPTVSTYEIMV 1270
            A+++VDEMR+C IGPN+RTYDIILHHL+K RR  +AYS+FQ++S + GCEPTVSTYEI+V
Sbjct: 355  AFRVVDEMRKCGIGPNSRTYDIILHHLVKHRRTEQAYSVFQRISREPGCEPTVSTYEILV 414

Query: 1271 RMFCNEDRTDMALRVWDQMKAK 1336
            RMFCNE+R DMAL+VWDQMK K
Sbjct: 415  RMFCNENRVDMALQVWDQMKTK 436



 Score = 88.6 bits (218), Expect = 5e-15
 Identities = 57/209 (27%), Positives = 105/209 (50%), Gaps = 2/209 (0%)
 Frame = +2

Query: 383  KQNGLNHSAESYHGLIEALGKIKQFKMVWILVDELKNKGLL-CKDAFALVSRRYARARKV 559
            K  G +    +Y  LI A  K K++  V  L  E++ K +      F ++       +++
Sbjct: 258  KAEGFDPDVVTYGILINAHCKAKKYNEVIGLFREMEAKNVRPSPHIFCMLINGLGSEKRL 317

Query: 560  KEAIEAFERMEKYGLVHELQDFNRLLDTLCKSRQVGNAQDVFDKWKNRKFKPNIKSYTIL 739
             EA+E FER +  GL  E   +N ++   C S ++ +A  V D+ +     PN ++Y I+
Sbjct: 318  AEALEFFERFKASGLEAEAPTYNAVVGAYCWSMRMSDAFRVVDEMRKCGIGPNSRTYDII 377

Query: 740  LEGWGQEKNLLRLNEVYREMEGD-GIEPDVVSYGIMIHAHCKVKKYDEAIELLCELERKK 916
            L    + +   +   V++ +  + G EP V +Y I++   C   + D A+++  +++ K 
Sbjct: 378  LHHLVKHRRTEQAYSVFQRISREPGCEPTVSTYEILVRMFCNENRVDMALQVWDQMKTKG 437

Query: 917  IKVTPHVYCTLINGLGSEKRLDEANKYFE 1003
            +    H++ TLIN L  E +LDEA +YF+
Sbjct: 438  VLPRMHMFSTLINTLCHENKLDEACRYFQ 466


>ref|XP_004161997.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At1g71060, mitochondrial-like [Cucumis sativus]
          Length = 542

 Score =  519 bits (1336), Expect = e-144
 Identities = 247/377 (65%), Positives = 310/377 (82%), Gaps = 2/377 (0%)
 Frame = +2

Query: 212  EITQEAEKICKKLLKNSN--IGDALSSAKVNVSPLLVNEVIKKLNNSGVLALSFFRWAEK 385
            EI Q+AEK CK + KN N  I   L  A + +SP L+ EV+KKL+N+G LALSFFRWAEK
Sbjct: 89   EIAQDAEKFCKLISKNPNSCIESLLDGAPMELSPALIVEVLKKLSNAGFLALSFFRWAEK 148

Query: 386  QNGLNHSAESYHGLIEALGKIKQFKMVWILVDELKNKGLLCKDAFALVSRRYARARKVKE 565
            Q G  H+ ESY+ LIEALGKIKQF ++W LV ++K KG+L ++ FAL++RRYARARKVKE
Sbjct: 149  QKGFKHTTESYNLLIEALGKIKQFNVIWNLVSDMKRKGILSRETFALITRRYARARKVKE 208

Query: 566  AIEAFERMEKYGLVHELQDFNRLLDTLCKSRQVGNAQDVFDKWKNRKFKPNIKSYTILLE 745
            A+E+FE+MEK+G    + DFNRLLDTLCKSR V  AQ+VFDK K+ +FKP+IKSYTILLE
Sbjct: 209  AVESFEKMEKFGFQMGVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRFKPDIKSYTILLE 268

Query: 746  GWGQEKNLLRLNEVYREMEGDGIEPDVVSYGIMIHAHCKVKKYDEAIELLCELERKKIKV 925
            GWGQ++NLL+LNEVYREM  +G EPDVV++GI+I+AHCK +KYDEAI L  E+E K IK 
Sbjct: 269  GWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKP 328

Query: 926  TPHVYCTLINGLGSEKRLDEANKYFELYKGSGFELEVFTFNAMVGAYCWSMRMDDAYKLV 1105
            +PHV+CTLINGLGSEKRL EA ++FE  K SGF  E  T+NA+VGAYCWSM+M  AY++V
Sbjct: 329  SPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMV 388

Query: 1106 DEMRRCKIGPNTRTYDIILHHLIKARRMNEAYSMFQKVSNDFGCEPTVSTYEIMVRMFCN 1285
            DEMR+  +GPN+RTYDIILHHLIK R+  EAYS+FQ++S + GCEPT+STY+IM+RMFCN
Sbjct: 389  DEMRKSGVGPNSRTYDIILHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCN 448

Query: 1286 EDRTDMALRVWDQMKAK 1336
            E+R DMA+++WD+MKAK
Sbjct: 449  EERVDMAIQIWDEMKAK 465



 Score = 85.9 bits (211), Expect = 4e-14
 Identities = 60/253 (23%), Positives = 116/253 (45%), Gaps = 2/253 (0%)
 Frame = +2

Query: 383  KQNGLNHSAESYHGLIEALGKIKQFKMVWILVDELKNKGLL-CKDAFALVSRRYARARKV 559
            +  G      ++  LI A  K +++     L  E++ K +      F  +       +++
Sbjct: 287  RDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSEKRL 346

Query: 560  KEAIEAFERMEKYGLVHELQDFNRLLDTLCKSRQVGNAQDVFDKWKNRKFKPNIKSYTIL 739
            KEA+E FE+++  G   E   +N ++   C S ++  A  + D+ +     PN ++Y I+
Sbjct: 347  KEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDII 406

Query: 740  LEGWGQEKNLLRLNEVYREMEGD-GIEPDVVSYGIMIHAHCKVKKYDEAIELLCELERKK 916
            L    + +       V++ M  + G EP + +Y IMI   C  ++ D AI++  E++ K 
Sbjct: 407  LHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAKG 466

Query: 917  IKVTPHVYCTLINGLGSEKRLDEANKYFELYKGSGFELEVFTFNAMVGAYCWSMRMDDAY 1096
            +    H++ TLIN L  E +L++A  YF+     G       F+ +  A     R D A 
Sbjct: 467  VLPGMHLFSTLINSLCHEHKLEDACTYFQEMLDVGIRPPATMFSNLKQALLDDGRKDTAL 526

Query: 1097 KLVDEMRRCKIGP 1135
             + +++ + +  P
Sbjct: 527  LMAEKIXKLRKAP 539



 Score = 75.1 bits (183), Expect = 6e-11
 Identities = 60/272 (22%), Positives = 120/272 (44%), Gaps = 2/272 (0%)
 Frame = +2

Query: 410  ESYHGLIEALGKIKQFKMVWILVDELKNKGLLCKDA-FALVSRRYARARKVKEAIEAFER 586
            +SY  L+E  G+ +    +  +  E++++G       F ++   + +ARK  EAI  F  
Sbjct: 261  KSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILINAHCKARKYDEAIRLFHE 320

Query: 587  MEKYGLVHELQDFNRLLDTLCKSRQVGNAQDVFDKWKNRKFKPNIKSYTILLEGWGQEKN 766
            ME   +      F  L++ L   +++  A + F++ K   F P   +Y  ++  +     
Sbjct: 321  MEAKNIKPSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMK 380

Query: 767  LLRLNEVYREMEGDGIEPDVVSYGIMIHAHCKVKKYDEAIELLCELERKK-IKVTPHVYC 943
            +     +  EM   G+ P+  +Y I++H   K +K  EA  +   + R+   + T   Y 
Sbjct: 381  MAYAYRMVDEMRKSGVGPNSRTYDIILHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYD 440

Query: 944  TLINGLGSEKRLDEANKYFELYKGSGFELEVFTFNAMVGAYCWSMRMDDAYKLVDEMRRC 1123
             +I    +E+R+D A + ++  K  G    +  F+ ++ + C   +++DA     EM   
Sbjct: 441  IMIRMFCNEERVDMAIQIWDEMKAKGVLPGMHLFSTLINSLCHEHKLEDACTYFQEMLDV 500

Query: 1124 KIGPNTRTYDIILHHLIKARRMNEAYSMFQKV 1219
             I P    +  +   L+   R + A  M +K+
Sbjct: 501  GIRPPATMFSNLKQALLDDGRKDTALLMAEKI 532


>ref|XP_004150483.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
            mitochondrial-like [Cucumis sativus]
          Length = 542

 Score =  519 bits (1336), Expect = e-144
 Identities = 247/377 (65%), Positives = 310/377 (82%), Gaps = 2/377 (0%)
 Frame = +2

Query: 212  EITQEAEKICKKLLKNSN--IGDALSSAKVNVSPLLVNEVIKKLNNSGVLALSFFRWAEK 385
            EI Q+AEK CK + KN N  I   L  A + +SP L+ EV+KKL+N+G LALSFFRWAEK
Sbjct: 89   EIAQDAEKFCKLISKNPNSCIESLLDGAPMELSPALIVEVLKKLSNAGFLALSFFRWAEK 148

Query: 386  QNGLNHSAESYHGLIEALGKIKQFKMVWILVDELKNKGLLCKDAFALVSRRYARARKVKE 565
            Q G  H+ ESY+ LIEALGKIKQF ++W LV ++K KG+L ++ FAL++RRYARARKVKE
Sbjct: 149  QKGFKHTTESYNLLIEALGKIKQFNVIWNLVSDMKRKGILSRETFALITRRYARARKVKE 208

Query: 566  AIEAFERMEKYGLVHELQDFNRLLDTLCKSRQVGNAQDVFDKWKNRKFKPNIKSYTILLE 745
            A+E+FE+MEK+G    + DFNRLLDTLCKSR V  AQ+VFDK K+ +FKP+IKSYTILLE
Sbjct: 209  AVESFEKMEKFGFQMGVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRFKPDIKSYTILLE 268

Query: 746  GWGQEKNLLRLNEVYREMEGDGIEPDVVSYGIMIHAHCKVKKYDEAIELLCELERKKIKV 925
            GWGQ++NLL+LNEVYREM  +G EPDVV++GI+I+AHCK +KYDEAI L  E+E K IK 
Sbjct: 269  GWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKP 328

Query: 926  TPHVYCTLINGLGSEKRLDEANKYFELYKGSGFELEVFTFNAMVGAYCWSMRMDDAYKLV 1105
            +PHV+CTLINGLGSEKRL EA ++FE  K SGF  E  T+NA+VGAYCWSM+M  AY++V
Sbjct: 329  SPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMV 388

Query: 1106 DEMRRCKIGPNTRTYDIILHHLIKARRMNEAYSMFQKVSNDFGCEPTVSTYEIMVRMFCN 1285
            DEMR+  +GPN+RTYDIILHHLIK R+  EAYS+FQ++S + GCEPT+STY+IM+RMFCN
Sbjct: 389  DEMRKSGVGPNSRTYDIILHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCN 448

Query: 1286 EDRTDMALRVWDQMKAK 1336
            E+R DMA+++WD+MKAK
Sbjct: 449  EERVDMAIQIWDEMKAK 465



 Score = 87.0 bits (214), Expect = 2e-14
 Identities = 60/253 (23%), Positives = 117/253 (46%), Gaps = 2/253 (0%)
 Frame = +2

Query: 383  KQNGLNHSAESYHGLIEALGKIKQFKMVWILVDELKNKGLL-CKDAFALVSRRYARARKV 559
            +  G      ++  LI A  K +++     L  E++ K +      F  +       +++
Sbjct: 287  RDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSEKRL 346

Query: 560  KEAIEAFERMEKYGLVHELQDFNRLLDTLCKSRQVGNAQDVFDKWKNRKFKPNIKSYTIL 739
            KEA+E FE+++  G   E   +N ++   C S ++  A  + D+ +     PN ++Y I+
Sbjct: 347  KEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDII 406

Query: 740  LEGWGQEKNLLRLNEVYREMEGD-GIEPDVVSYGIMIHAHCKVKKYDEAIELLCELERKK 916
            L    + +       V++ M  + G EP + +Y IMI   C  ++ D AI++  E++ K 
Sbjct: 407  LHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAKG 466

Query: 917  IKVTPHVYCTLINGLGSEKRLDEANKYFELYKGSGFELEVFTFNAMVGAYCWSMRMDDAY 1096
            +    H++ TLIN L  E +L++A  YF+     G       F+ +  A     R D A 
Sbjct: 467  VLPGMHLFSTLINSLCHEHKLEDACTYFQEMLDVGIRPPATMFSNLKQALLDDGRKDTAL 526

Query: 1097 KLVDEMRRCKIGP 1135
             + +++++ +  P
Sbjct: 527  LMAEKIKKLRKAP 539


>ref|XP_006468828.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
            mitochondrial-like [Citrus sinensis]
          Length = 537

 Score =  511 bits (1316), Expect = e-142
 Identities = 244/372 (65%), Positives = 304/372 (81%), Gaps = 1/372 (0%)
 Frame = +2

Query: 224  EAEKICKKLLKNS-NIGDALSSAKVNVSPLLVNEVIKKLNNSGVLALSFFRWAEKQNGLN 400
            + E+ICK +L N+ N+  +L  A + VSP LV EV+K+L+N+GVLALSFFRWAEKQ G  
Sbjct: 86   QIERICKIVLTNTANVESSLDVASIEVSPTLVLEVLKRLSNAGVLALSFFRWAEKQKGFK 145

Query: 401  HSAESYHGLIEALGKIKQFKMVWILVDELKNKGLLCKDAFALVSRRYARARKVKEAIEAF 580
            +S ESY+ LIE+LGK+KQFK++W LV E+K K LL  D FAL+SRRYARAR+V EAI+AF
Sbjct: 146  YSTESYNALIESLGKVKQFKLIWDLVSEMKRKRLLTNDTFALISRRYARARRVNEAIDAF 205

Query: 581  ERMEKYGLVHELQDFNRLLDTLCKSRQVGNAQDVFDKWKNRKFKPNIKSYTILLEGWGQE 760
            E+M+K+GL  EL DFNRL+DTLCKSR V  AQ+VFDK K R+F P+IKSYTILLEGWGQ+
Sbjct: 206  EKMDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQ 265

Query: 761  KNLLRLNEVYREMEGDGIEPDVVSYGIMIHAHCKVKKYDEAIELLCELERKKIKVTPHVY 940
            KNLL +NEVYREM+ DG EPDVVSYGIMI+AHC  K+YDEA+EL  E+E    K +PH++
Sbjct: 266  KNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 325

Query: 941  CTLINGLGSEKRLDEANKYFELYKGSGFELEVFTFNAMVGAYCWSMRMDDAYKLVDEMRR 1120
            CTLINGLGSEKRL EA ++F   K  GFE E  T+NA+VGAYCWSMR++DAY+++DEMR+
Sbjct: 326  CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 385

Query: 1121 CKIGPNTRTYDIILHHLIKARRMNEAYSMFQKVSNDFGCEPTVSTYEIMVRMFCNEDRTD 1300
            C IGPN+RTYDI+LHHLIKA R  EAYS+F+++S   G EPTVSTYEI+VRMFC   + D
Sbjct: 386  CGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 445

Query: 1301 MALRVWDQMKAK 1336
            MA+R+WD+MKA+
Sbjct: 446  MAMRIWDEMKAR 457



 Score = 77.0 bits (188), Expect = 2e-11
 Identities = 54/211 (25%), Positives = 98/211 (46%), Gaps = 4/211 (1%)
 Frame = +2

Query: 383  KQNGLNHSAESYHGLIEALGKIKQFKMVWILVDELKNKGLLCKDA---FALVSRRYARAR 553
            K +G      SY  +I A    K++     L  E++     CK +   F  +       +
Sbjct: 279  KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATN--CKPSPHIFCTLINGLGSEK 336

Query: 554  KVKEAIEAFERMEKYGLVHELQDFNRLLDTLCKSRQVGNAQDVFDKWKNRKFKPNIKSYT 733
            ++ EA++ F + +K G   E   +N ++   C S ++ +A  + D+ +     PN ++Y 
Sbjct: 337  RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNSRTYD 396

Query: 734  ILLEGWGQEKNLLRLNEVYREMEGD-GIEPDVVSYGIMIHAHCKVKKYDEAIELLCELER 910
            I+L    +         V++ M    G EP V +Y I++   C   + D A+ +  E++ 
Sbjct: 397  IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 456

Query: 911  KKIKVTPHVYCTLINGLGSEKRLDEANKYFE 1003
            + +    H+Y TLIN L  E +LD+A KYF+
Sbjct: 457  RGVLPVMHMYSTLINSLCHEDKLDDACKYFQ 487


>ref|XP_006448295.1| hypothetical protein CICLE_v10014876mg [Citrus clementina]
            gi|557550906|gb|ESR61535.1| hypothetical protein
            CICLE_v10014876mg [Citrus clementina]
          Length = 531

 Score =  511 bits (1316), Expect = e-142
 Identities = 244/372 (65%), Positives = 304/372 (81%), Gaps = 1/372 (0%)
 Frame = +2

Query: 224  EAEKICKKLLKNS-NIGDALSSAKVNVSPLLVNEVIKKLNNSGVLALSFFRWAEKQNGLN 400
            + E+ICK +L N+ N+  +L  A + VSP LV EV+K+L+N+GVLALSFFRWAEKQ G  
Sbjct: 86   QIERICKIVLTNTANVESSLDVASIEVSPTLVLEVLKRLSNAGVLALSFFRWAEKQKGFK 145

Query: 401  HSAESYHGLIEALGKIKQFKMVWILVDELKNKGLLCKDAFALVSRRYARARKVKEAIEAF 580
            +S ESY+ LIE+LGK+KQFK++W LV E+K K LL  D FAL+SRRYARAR+V EAI+AF
Sbjct: 146  YSTESYNALIESLGKVKQFKLIWDLVSEMKRKRLLTNDTFALISRRYARARRVNEAIDAF 205

Query: 581  ERMEKYGLVHELQDFNRLLDTLCKSRQVGNAQDVFDKWKNRKFKPNIKSYTILLEGWGQE 760
            E+M+K+GL  EL DFNRL+DTLCKSR V  AQ+VFDK K R+F P+IKSYTILLEGWGQ+
Sbjct: 206  EKMDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQ 265

Query: 761  KNLLRLNEVYREMEGDGIEPDVVSYGIMIHAHCKVKKYDEAIELLCELERKKIKVTPHVY 940
            KNLL +NEVYREM+ DG EPDVVSYGIMI+AHC  K+YDEA+EL  E+E    K +PH++
Sbjct: 266  KNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 325

Query: 941  CTLINGLGSEKRLDEANKYFELYKGSGFELEVFTFNAMVGAYCWSMRMDDAYKLVDEMRR 1120
            CTLINGLGSEKRL EA ++F   K  GFE E  T+NA+VGAYCWSMR++DAY+++DEMR+
Sbjct: 326  CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 385

Query: 1121 CKIGPNTRTYDIILHHLIKARRMNEAYSMFQKVSNDFGCEPTVSTYEIMVRMFCNEDRTD 1300
            C IGPN+RTYDI+LHHLIKA R  EAYS+F+++S   G EPTVSTYEI+VRMFC   + D
Sbjct: 386  CGIGPNSRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 445

Query: 1301 MALRVWDQMKAK 1336
            MA+R+WD+MKA+
Sbjct: 446  MAMRIWDEMKAR 457



 Score = 77.0 bits (188), Expect = 2e-11
 Identities = 54/211 (25%), Positives = 98/211 (46%), Gaps = 4/211 (1%)
 Frame = +2

Query: 383  KQNGLNHSAESYHGLIEALGKIKQFKMVWILVDELKNKGLLCKDA---FALVSRRYARAR 553
            K +G      SY  +I A    K++     L  E++     CK +   F  +       +
Sbjct: 279  KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATN--CKPSPHIFCTLINGLGSEK 336

Query: 554  KVKEAIEAFERMEKYGLVHELQDFNRLLDTLCKSRQVGNAQDVFDKWKNRKFKPNIKSYT 733
            ++ EA++ F + +K G   E   +N ++   C S ++ +A  + D+ +     PN ++Y 
Sbjct: 337  RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNSRTYD 396

Query: 734  ILLEGWGQEKNLLRLNEVYREMEGD-GIEPDVVSYGIMIHAHCKVKKYDEAIELLCELER 910
            I+L    +         V++ M    G EP V +Y I++   C   + D A+ +  E++ 
Sbjct: 397  IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 456

Query: 911  KKIKVTPHVYCTLINGLGSEKRLDEANKYFE 1003
            + +    H+Y TLIN L  E +LD+A KYF+
Sbjct: 457  RGVLPVMHMYSTLINSLCHEDKLDDACKYFQ 487


>gb|ACP39954.1| pentatricopeptide repeat protein [Gossypium hirsutum]
            gi|227463006|gb|ACP39955.1| pentatricopeptide repeat
            protein [Gossypium hirsutum]
          Length = 547

 Score =  508 bits (1308), Expect = e-141
 Identities = 252/381 (66%), Positives = 305/381 (80%), Gaps = 2/381 (0%)
 Frame = +2

Query: 200  PKYPEITQEAEKICKKLLKNS--NIGDALSSAKVNVSPLLVNEVIKKLNNSGVLALSFFR 373
            P   ++ Q+A +IC  L  +S  +    L  A + VSP LV EV+K+L+N+GV+ALSFF 
Sbjct: 86   PAETKLEQDAARICTLLSTHSGSHADKLLEDASIKVSPSLVVEVLKRLSNAGVIALSFFT 145

Query: 374  WAEKQNGLNHSAESYHGLIEALGKIKQFKMVWILVDELKNKGLLCKDAFALVSRRYARAR 553
            WAEKQ G  ++ ESY+ LIEALGKIKQFK++  LV+E+K++ LL KD FAL+SRR+ARAR
Sbjct: 146  WAEKQKGFKYNTESYNALIEALGKIKQFKLIRSLVNEMKSRKLLNKDTFALISRRHARAR 205

Query: 554  KVKEAIEAFERMEKYGLVHELQDFNRLLDTLCKSRQVGNAQDVFDKWKNRKFKPNIKSYT 733
            KV+EAIEAFERME++G   E  DFNRLLDTLCKSR V  A  VFDK K R+F P+IKSYT
Sbjct: 206  KVEEAIEAFERMEEFGFKLETSDFNRLLDTLCKSRHVEKANKVFDKMKKRRFVPDIKSYT 265

Query: 734  ILLEGWGQEKNLLRLNEVYREMEGDGIEPDVVSYGIMIHAHCKVKKYDEAIELLCELERK 913
            ILLEGWG+E NLLRL+EVY EM+ DG EPDVV+YGI+I A+CK KKYD AIEL  E+E K
Sbjct: 266  ILLEGWGKEHNLLRLDEVYLEMKYDGFEPDVVTYGILISAYCKAKKYDAAIELFHEMEAK 325

Query: 914  KIKVTPHVYCTLINGLGSEKRLDEANKYFELYKGSGFELEVFTFNAMVGAYCWSMRMDDA 1093
              K TPHVYCTLINGLGSEKRL EA ++FE +K  GF  E  T+N++VGAYCWSMR+DDA
Sbjct: 326  NCKPTPHVYCTLINGLGSEKRLSEALEFFERFKSCGFTPEAPTYNSLVGAYCWSMRIDDA 385

Query: 1094 YKLVDEMRRCKIGPNTRTYDIILHHLIKARRMNEAYSMFQKVSNDFGCEPTVSTYEIMVR 1273
            ++++DEMR+   GPN+RTYDIILHHLIKARR NEAY  FQK+SN+ GCEPTVSTYEI+VR
Sbjct: 386  FQVIDEMRKHSAGPNSRTYDIILHHLIKARRTNEAYFRFQKMSNEPGCEPTVSTYEIIVR 445

Query: 1274 MFCNEDRTDMALRVWDQMKAK 1336
            MFCNEDR D+A +VWDQMKAK
Sbjct: 446  MFCNEDRVDLAKQVWDQMKAK 466



 Score = 85.1 bits (209), Expect = 6e-14
 Identities = 66/258 (25%), Positives = 117/258 (45%), Gaps = 7/258 (2%)
 Frame = +2

Query: 383  KQNGLNHSAESYHGLIEALGKIKQFKMVWILVDELKNKGLLCKDA---FALVSRRYARAR 553
            K +G      +Y  LI A  K K++     L  E++ K   CK     +  +       +
Sbjct: 288  KYDGFEPDVVTYGILISAYCKAKKYDAAIELFHEMEAKN--CKPTPHVYCTLINGLGSEK 345

Query: 554  KVKEAIEAFERMEKYGLVHELQDFNRLLDTLCKSRQVGNAQDVFDKWKNRKFKPNIKSYT 733
            ++ EA+E FER +  G   E   +N L+   C S ++ +A  V D+ +     PN ++Y 
Sbjct: 346  RLSEALEFFERFKSCGFTPEAPTYNSLVGAYCWSMRIDDAFQVIDEMRKHSAGPNSRTYD 405

Query: 734  ILLEGWGQEKNLLRLNEVY---REMEGD-GIEPDVVSYGIMIHAHCKVKKYDEAIELLCE 901
            I+L    + +   R NE Y   ++M  + G EP V +Y I++   C   + D A ++  +
Sbjct: 406  IILHHLIKAR---RTNEAYFRFQKMSNEPGCEPTVSTYEIIVRMFCNEDRVDLAKQVWDQ 462

Query: 902  LERKKIKVTPHVYCTLINGLGSEKRLDEANKYFELYKGSGFELEVFTFNAMVGAYCWSMR 1081
            ++ K +    H+Y  LI  L  + +L EA KYF+    +G       F+ +  A     +
Sbjct: 463  MKAKGVLPGMHMYSDLITSLCHKNKLGEACKYFQEMLDAGIRPPAKMFSNLKQALLDEGK 522

Query: 1082 MDDAYKLVDEMRRCKIGP 1135
             D+A  L  ++ + +  P
Sbjct: 523  NDEALNLARKINKLRGTP 540


>gb|EXB65620.1| hypothetical protein L484_025886 [Morus notabilis]
          Length = 551

 Score =  505 bits (1301), Expect = e-140
 Identities = 249/381 (65%), Positives = 300/381 (78%), Gaps = 3/381 (0%)
 Frame = +2

Query: 203  KYPEITQEAEKICKKLLKNSN---IGDALSSAKVNVSPLLVNEVIKKLNNSGVLALSFFR 373
            K     Q+AE ICK L  NS+   +   L +  V +S  LV EV+KKL+NSGVLALSFFR
Sbjct: 94   KTDRTAQDAENICKTLYINSSNDSVESFLDNIHVEMSATLVVEVLKKLSNSGVLALSFFR 153

Query: 374  WAEKQNGLNHSAESYHGLIEALGKIKQFKMVWILVDELKNKGLLCKDAFALVSRRYARAR 553
            WAEKQ G  H+ ESY  LIEALGKIKQFK +W LVDE+K K LL K+ FAL+SRRYARA+
Sbjct: 154  WAEKQKGFKHTTESYDALIEALGKIKQFKKIWNLVDEMKLKRLLTKNTFALISRRYARAK 213

Query: 554  KVKEAIEAFERMEKYGLVHELQDFNRLLDTLCKSRQVGNAQDVFDKWKNRKFKPNIKSYT 733
            K KEAIE F +M K+GL  E+ DFNRLLDTLCKS+    AQ VFD+   ++FKP+IKSYT
Sbjct: 214  KAKEAIETFRKMRKFGLKAEVSDFNRLLDTLCKSKFATIAQQVFDEMSEKRFKPDIKSYT 273

Query: 734  ILLEGWGQEKNLLRLNEVYREMEGDGIEPDVVSYGIMIHAHCKVKKYDEAIELLCELERK 913
            ILLEGWGQEKNLL+L EVYREM+ +GIEPDVV+YGIMI+AHCK +KYDEA  L  E+E  
Sbjct: 274  ILLEGWGQEKNLLKLKEVYREMKDEGIEPDVVTYGIMINAHCKARKYDEAFALFDEMEAN 333

Query: 914  KIKVTPHVYCTLINGLGSEKRLDEANKYFELYKGSGFELEVFTFNAMVGAYCWSMRMDDA 1093
              K +PH++CTLI GLGS KRL+EA + F   K  GFE EV T+NA+VGAYCWSM++D+A
Sbjct: 334  NCKPSPHIFCTLIIGLGSAKRLNEALEVFRRSKACGFEPEVPTYNALVGAYCWSMQLDNA 393

Query: 1094 YKLVDEMRRCKIGPNTRTYDIILHHLIKARRMNEAYSMFQKVSNDFGCEPTVSTYEIMVR 1273
            YK+VDEMR C +GPN+RTYDIILHHLIK +R  EA+S+FQ++S + GCEPTVSTYEIMVR
Sbjct: 394  YKVVDEMRECGVGPNSRTYDIILHHLIKDKRTEEAFSVFQRMSREPGCEPTVSTYEIMVR 453

Query: 1274 MFCNEDRTDMALRVWDQMKAK 1336
            MFCN +R DMA+++WDQMKAK
Sbjct: 454  MFCNVERLDMAIQIWDQMKAK 474



 Score =  101 bits (251), Expect = 8e-19
 Identities = 69/256 (26%), Positives = 124/256 (48%), Gaps = 7/256 (2%)
 Frame = +2

Query: 383  KQNGLNHSAESYHGLIEALGKIKQFKMVWILVDELKNKGLLCKDA---FALVSRRYARAR 553
            K  G+     +Y  +I A  K +++   + L DE++     CK +   F  +      A+
Sbjct: 296  KDEGIEPDVVTYGIMINAHCKARKYDEAFALFDEMEANN--CKPSPHIFCTLIIGLGSAK 353

Query: 554  KVKEAIEAFERMEKYGLVHELQDFNRLLDTLCKSRQVGNAQDVFDKWKNRKFKPNIKSYT 733
            ++ EA+E F R +  G   E+  +N L+   C S Q+ NA  V D+ +     PN ++Y 
Sbjct: 354  RLNEALEVFRRSKACGFEPEVPTYNALVGAYCWSMQLDNAYKVVDEMRECGVGPNSRTYD 413

Query: 734  ILLEGWGQEKNLLRLNEVYREMEGD-GIEPDVVSYGIMIHAHCKVKKYDEAIELLCELER 910
            I+L    ++K       V++ M  + G EP V +Y IM+   C V++ D AI++  +++ 
Sbjct: 414  IILHHLIKDKRTEEAFSVFQRMSREPGCEPTVSTYEIMVRMFCNVERLDMAIQIWDQMKA 473

Query: 911  KKIKVTPHVYCTLINGLGSEKRLDEANKYFELYKGSGFELEVFTFNAMVGAYCWSMRMD- 1087
            K +    H++ TLIN L  E +LD+A KYF+     G       ++ +  A     R D 
Sbjct: 474  KGVLPGMHMFSTLINSLCMEDKLDDACKYFQEMMDMGIRPPAQLYSNLKQALLDEGREDM 533

Query: 1088 --DAYKLVDEMRRCKI 1129
                Y+ ++++R+  +
Sbjct: 534  VQTLYERIEKLRKTSL 549


>ref|XP_002315895.2| hypothetical protein POPTR_0010s12490g [Populus trichocarpa]
            gi|550329653|gb|EEF02066.2| hypothetical protein
            POPTR_0010s12490g [Populus trichocarpa]
          Length = 488

 Score =  499 bits (1285), Expect = e-138
 Identities = 248/377 (65%), Positives = 300/377 (79%), Gaps = 2/377 (0%)
 Frame = +2

Query: 212  EITQEAEKICKKLLKNSN--IGDALSSAKVNVSPLLVNEVIKKLNNSGVLALSFFRWAEK 385
            +I ++AE ICK L KN N  +   L+ A + VSP LV E +KKL+N+G LALSFFRWAEK
Sbjct: 36   KIVEDAENICKLLSKNPNSSVEALLNKASMEVSPSLVFEALKKLSNAGALALSFFRWAEK 95

Query: 386  QNGLNHSAESYHGLIEALGKIKQFKMVWILVDELKNKGLLCKDAFALVSRRYARARKVKE 565
            Q G  +S ESYH LIE+LGKIKQF ++W LV ++K KGLL K+ FAL+SRRYARARKVKE
Sbjct: 96   QKGFQYSTESYHALIESLGKIKQFNVIWNLVTDMKQKGLLNKETFALISRRYARARKVKE 155

Query: 566  AIEAFERMEKYGLVHELQDFNRLLDTLCKSRQVGNAQDVFDKWKNRKFKPNIKSYTILLE 745
            A++AF +MEK+GL  E  D NRLLDTLCKSRQV  AQ VFDK   R F  +IKSYTILLE
Sbjct: 156  AVDAFMKMEKFGLKIESSDVNRLLDTLCKSRQVERAQLVFDKMNKRGFVADIKSYTILLE 215

Query: 746  GWGQEKNLLRLNEVYREMEGDGIEPDVVSYGIMIHAHCKVKKYDEAIELLCELERKKIKV 925
            GWGQEKNL RL EVY EM+ +G EPDVV+YGI+I+AHCK ++YD+AIEL  E+E K  K 
Sbjct: 216  GWGQEKNLSRLMEVYNEMKDEGFEPDVVTYGILINAHCKSRRYDDAIELFHEMEAKNCKP 275

Query: 926  TPHVYCTLINGLGSEKRLDEANKYFELYKGSGFELEVFTFNAMVGAYCWSMRMDDAYKLV 1105
            +PH+YCTLINGLG+EKRL EA ++FEL K SGF  E  T+NA+VGAYCWS RMDD  + +
Sbjct: 276  SPHIYCTLINGLGAEKRLSEALEFFELSKASGFVPEAPTYNAVVGAYCWSERMDDVQRTI 335

Query: 1106 DEMRRCKIGPNTRTYDIILHHLIKARRMNEAYSMFQKVSNDFGCEPTVSTYEIMVRMFCN 1285
            DEMR+  +GP+ RTYDIILHHLI+A +   AYS+FQK+S + GCEP+VSTYEI+VRMFCN
Sbjct: 336  DEMRKGGVGPSARTYDIILHHLIRAGKTKIAYSVFQKMSCE-GCEPSVSTYEIIVRMFCN 394

Query: 1286 EDRTDMALRVWDQMKAK 1336
            EDR DMA++VWDQMKAK
Sbjct: 395  EDRVDMAIKVWDQMKAK 411


>gb|EOY00910.1| Pentatricopeptide repeat-containing protein, putative isoform 1
            [Theobroma cacao] gi|508709014|gb|EOY00911.1|
            Pentatricopeptide repeat-containing protein, putative
            isoform 1 [Theobroma cacao]
          Length = 545

 Score =  498 bits (1283), Expect = e-138
 Identities = 241/381 (63%), Positives = 307/381 (80%), Gaps = 2/381 (0%)
 Frame = +2

Query: 200  PKYPEITQEAEKICKKLLKNSNI--GDALSSAKVNVSPLLVNEVIKKLNNSGVLALSFFR 373
            P  P++ ++A KICK L   S+I     L +A + VSP LV EV+K+L+N+GV+A+SFF 
Sbjct: 85   PAEPKLEEDAAKICKLLSSRSDIHVDKLLENASIEVSPSLVAEVLKRLSNAGVIAMSFFT 144

Query: 374  WAEKQNGLNHSAESYHGLIEALGKIKQFKMVWILVDELKNKGLLCKDAFALVSRRYARAR 553
            WAEKQ G  ++ ESY+ LIEALGKIKQFK++W L++++K+  LL KD FAL+SRRYARAR
Sbjct: 145  WAEKQKGFKYNTESYNALIEALGKIKQFKLIWNLLNDMKSSKLLSKDTFALISRRYARAR 204

Query: 554  KVKEAIEAFERMEKYGLVHELQDFNRLLDTLCKSRQVGNAQDVFDKWKNRKFKPNIKSYT 733
            KV+EAIEAFERME++G   +  DFNRL+DTL KSR V  A  VFDK K R+F P+IKSYT
Sbjct: 205  KVEEAIEAFERMEEFGFKLDTSDFNRLIDTLSKSRHVEKANKVFDKMKKRRFVPDIKSYT 264

Query: 734  ILLEGWGQEKNLLRLNEVYREMEGDGIEPDVVSYGIMIHAHCKVKKYDEAIELLCELERK 913
            ILLEGWG+E NLLRL+EVYREM+ +G EPDVV+YGI+I+A+CK KKY+ A+EL  E+E K
Sbjct: 265  ILLEGWGKEHNLLRLDEVYREMKDEGFEPDVVTYGILINAYCKAKKYNRAVELFHEMEAK 324

Query: 914  KIKVTPHVYCTLINGLGSEKRLDEANKYFELYKGSGFELEVFTFNAMVGAYCWSMRMDDA 1093
              K +PHV+CTLINGLGSEKRL EA ++FE  K  GF  E  T+N++VGAYCWSM+MDDA
Sbjct: 325  NCKPSPHVFCTLINGLGSEKRLSEALEFFERSKSCGFAPEAPTYNSLVGAYCWSMQMDDA 384

Query: 1094 YKLVDEMRRCKIGPNTRTYDIILHHLIKARRMNEAYSMFQKVSNDFGCEPTVSTYEIMVR 1273
            ++++ EMRR  +GPN+RTYDIILHHLIKARRM EAY +FQK++++ GC PTVSTYEI+VR
Sbjct: 385  FRVIGEMRRNLVGPNSRTYDIILHHLIKARRMKEAYLVFQKMTSEPGCVPTVSTYEIIVR 444

Query: 1274 MFCNEDRTDMALRVWDQMKAK 1336
            MFCNE++ DMA+ VW QMKA+
Sbjct: 445  MFCNEEQVDMAMLVWAQMKAE 465



 Score = 84.7 bits (208), Expect = 8e-14
 Identities = 63/253 (24%), Positives = 116/253 (45%), Gaps = 7/253 (2%)
 Frame = +2

Query: 383  KQNGLNHSAESYHGLIEALGKIKQFKMVWILVDELKNKGLLCKDA---FALVSRRYARAR 553
            K  G      +Y  LI A  K K++     L  E++ K   CK +   F  +       +
Sbjct: 287  KDEGFEPDVVTYGILINAYCKAKKYNRAVELFHEMEAKN--CKPSPHVFCTLINGLGSEK 344

Query: 554  KVKEAIEAFERMEKYGLVHELQDFNRLLDTLCKSRQVGNAQDVFDKWKNRKFKPNIKSYT 733
            ++ EA+E FER +  G   E   +N L+   C S Q+ +A  V  + +     PN ++Y 
Sbjct: 345  RLSEALEFFERSKSCGFAPEAPTYNSLVGAYCWSMQMDDAFRVIGEMRRNLVGPNSRTYD 404

Query: 734  ILLEGWGQEKNLLRLNEVYREMEGD-GIEPDVVSYGIMIHAHCKVKKYDEAIELLCELER 910
            I+L    + + +     V+++M  + G  P V +Y I++   C  ++ D A+ +  +++ 
Sbjct: 405  IILHHLIKARRMKEAYLVFQKMTSEPGCVPTVSTYEIIVRMFCNEEQVDMAMLVWAQMKA 464

Query: 911  KKIKVTPHVYCTLINGLGSEKRLDEANKYFELYKGSGFELEVFTFNAMVGAYCWSMRMDD 1090
            + +    H++  LIN L    +LD+A KYF+    +G       F+ +  A     + D 
Sbjct: 465  EGVLPGMHMFSDLINSLCHNSKLDDACKYFQEMLDAGIRPPAKMFSNLKQALLDEGKKDT 524

Query: 1091 AYKL---VDEMRR 1120
            A  L   +D++R+
Sbjct: 525  ALNLARKIDKLRK 537


>ref|XP_002888819.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297334660|gb|EFH65078.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 512

 Score =  495 bits (1274), Expect = e-137
 Identities = 237/377 (62%), Positives = 302/377 (80%), Gaps = 2/377 (0%)
 Frame = +2

Query: 212  EITQEAEKICKKLLK--NSNIGDALSSAKVNVSPLLVNEVIKKLNNSGVLALSFFRWAEK 385
            +++Q+A+KICK L K  +S +   L+ A V +SP L+ EV+KKL+N+GVLALS F+WAE 
Sbjct: 63   DVSQDADKICKILSKFTDSKVETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAEN 122

Query: 386  QNGLNHSAESYHGLIEALGKIKQFKMVWILVDELKNKGLLCKDAFALVSRRYARARKVKE 565
            Q G  H+  +Y+ LIE+LGKIKQFK++W LVD++K K LL KD FAL+SRRYARARKVKE
Sbjct: 123  QKGFKHTTSNYNALIESLGKIKQFKLIWNLVDDMKQKKLLSKDTFALISRRYARARKVKE 182

Query: 566  AIEAFERMEKYGLVHELQDFNRLLDTLCKSRQVGNAQDVFDKWKNRKFKPNIKSYTILLE 745
            AI AF +ME YG   E  DFNR+LD L KSR VG+AQ VFDK K ++F+P+IKSYTILLE
Sbjct: 183  AITAFHKMEDYGFKMESSDFNRMLDILSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLE 242

Query: 746  GWGQEKNLLRLNEVYREMEGDGIEPDVVSYGIMIHAHCKVKKYDEAIELLCELERKKIKV 925
            GWGQE NLLR+NEVY EM+ +G EPDVV+YGI+I+A+CK KKYDEA+    E+E++  K 
Sbjct: 243  GWGQELNLLRVNEVYGEMKDEGFEPDVVAYGIIINAYCKAKKYDEAVRFFNEMEQRNCKP 302

Query: 926  TPHVYCTLINGLGSEKRLDEANKYFELYKGSGFELEVFTFNAMVGAYCWSMRMDDAYKLV 1105
            +PH++C+LINGLGSEK+L++A ++FE  K SGF LE  T+NA+VGAYCWS RM+DA+K V
Sbjct: 303  SPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAFKTV 362

Query: 1106 DEMRRCKIGPNTRTYDIILHHLIKARRMNEAYSMFQKVSNDFGCEPTVSTYEIMVRMFCN 1285
            DEMR   IGPN RTYDIILHHLI+ +R  EAY ++QK+S    CEPTVSTYEIMVRMFCN
Sbjct: 363  DEMRSKGIGPNARTYDIILHHLIRMQRTKEAYEVYQKMS----CEPTVSTYEIMVRMFCN 418

Query: 1286 EDRTDMALRVWDQMKAK 1336
            ++R DMA+++WD+MK K
Sbjct: 419  KERLDMAIKIWDEMKGK 435



 Score = 86.7 bits (213), Expect = 2e-14
 Identities = 57/209 (27%), Positives = 103/209 (49%), Gaps = 3/209 (1%)
 Frame = +2

Query: 383  KQNGLNHSAESYHGLIEALGKIKQFKMVWILVDELKNKGLLCKDA---FALVSRRYARAR 553
            K  G      +Y  +I A  K K++       +E++ +   CK +   F  +       +
Sbjct: 261  KDEGFEPDVVAYGIIINAYCKAKKYDEAVRFFNEMEQRN--CKPSPHIFCSLINGLGSEK 318

Query: 554  KVKEAIEAFERMEKYGLVHELQDFNRLLDTLCKSRQVGNAQDVFDKWKNRKFKPNIKSYT 733
            K+ +A+E FER +  G   E   +N L+   C S+++ +A    D+ +++   PN ++Y 
Sbjct: 319  KLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAFKTVDEMRSKGIGPNARTYD 378

Query: 734  ILLEGWGQEKNLLRLNEVYREMEGDGIEPDVVSYGIMIHAHCKVKKYDEAIELLCELERK 913
            I+L    + +      EVY++M     EP V +Y IM+   C  ++ D AI++  E++ K
Sbjct: 379  IILHHLIRMQRTKEAYEVYQKMS---CEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGK 435

Query: 914  KIKVTPHVYCTLINGLGSEKRLDEANKYF 1000
             +    H++ +LI  L  E +LDEA +YF
Sbjct: 436  GVLPGMHMFSSLITALCHENKLDEACEYF 464



 Score = 80.9 bits (198), Expect = 1e-12
 Identities = 65/301 (21%), Positives = 137/301 (45%), Gaps = 1/301 (0%)
 Frame = +2

Query: 320  EVIKKLNNSGVLALSFFRWAEKQNGLNHSAESYHGLIEALGKIKQFKMVWILVDELKNKG 499
            +++ K  N G     F +  +K+       +SY  L+E  G+      V  +  E+K++G
Sbjct: 207  DILSKSRNVGDAQKVFDKMKKKR--FEPDIKSYTILLEGWGQELNLLRVNEVYGEMKDEG 264

Query: 500  LLCKD-AFALVSRRYARARKVKEAIEAFERMEKYGLVHELQDFNRLLDTLCKSRQVGNAQ 676
                  A+ ++   Y +A+K  EA+  F  ME+         F  L++ L   +++ +A 
Sbjct: 265  FEPDVVAYGIIINAYCKAKKYDEAVRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDAL 324

Query: 677  DVFDKWKNRKFKPNIKSYTILLEGWGQEKNLLRLNEVYREMEGDGIEPDVVSYGIMIHAH 856
            + F++ K+  F     +Y  L+  +   + +    +   EM   GI P+  +Y I++H  
Sbjct: 325  EFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAFKTVDEMRSKGIGPNARTYDIILHHL 384

Query: 857  CKVKKYDEAIELLCELERKKIKVTPHVYCTLINGLGSEKRLDEANKYFELYKGSGFELEV 1036
             ++++  EA E+    ++   + T   Y  ++    +++RLD A K ++  KG G    +
Sbjct: 385  IRMQRTKEAYEVY---QKMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGM 441

Query: 1037 FTFNAMVGAYCWSMRMDDAYKLVDEMRRCKIGPNTRTYDIILHHLIKARRMNEAYSMFQK 1216
              F++++ A C   ++D+A +  +EM    I P    +  +   L+   R ++   +  K
Sbjct: 442  HMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHLFSRLKQTLLDEGRKDKVADLAVK 501

Query: 1217 V 1219
            +
Sbjct: 502  M 502


>ref|XP_006301573.1| hypothetical protein CARUB_v10022011mg [Capsella rubella]
            gi|482570283|gb|EOA34471.1| hypothetical protein
            CARUB_v10022011mg [Capsella rubella]
          Length = 512

 Score =  492 bits (1267), Expect = e-136
 Identities = 234/377 (62%), Positives = 301/377 (79%), Gaps = 2/377 (0%)
 Frame = +2

Query: 212  EITQEAEKICKKLLK--NSNIGDALSSAKVNVSPLLVNEVIKKLNNSGVLALSFFRWAEK 385
            +++ +AE+ICK L K  +SN+   L+ A V +SP LV EV+KKL+N+G LALS F+WAE 
Sbjct: 63   DVSHDAERICKVLTKFTDSNVETLLNEASVKLSPALVEEVLKKLSNAGFLALSVFKWAEN 122

Query: 386  QNGLNHSAESYHGLIEALGKIKQFKMVWILVDELKNKGLLCKDAFALVSRRYARARKVKE 565
            Q G  H+  SY+ LIE+LGKIKQFK++W LVD++K K LL +D FAL+SRRYARARKVKE
Sbjct: 123  QKGFKHTTASYNALIESLGKIKQFKLIWCLVDDMKQKKLLSRDTFALISRRYARARKVKE 182

Query: 566  AIEAFERMEKYGLVHELQDFNRLLDTLCKSRQVGNAQDVFDKWKNRKFKPNIKSYTILLE 745
            AI AF +ME+YG   E  DFNR+LDTL KSR VG+AQ VFDK K ++F+P+IKSYTILLE
Sbjct: 183  AITAFHKMEEYGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKIKKKRFEPDIKSYTILLE 242

Query: 746  GWGQEKNLLRLNEVYREMEGDGIEPDVVSYGIMIHAHCKVKKYDEAIELLCELERKKIKV 925
            GWGQE NLLR+NEVY EM+ +G EPDVV+YGI+I+AHCK KKYDEA+    E+E++  K 
Sbjct: 243  GWGQELNLLRVNEVYGEMKDEGFEPDVVTYGIIINAHCKAKKYDEAVRFFNEMEQRNCKP 302

Query: 926  TPHVYCTLINGLGSEKRLDEANKYFELYKGSGFELEVFTFNAMVGAYCWSMRMDDAYKLV 1105
            +PH++C+LINGLGSE++L++A ++FE  K SGF LE  T+NA+VGAYCWS RM+DA+K V
Sbjct: 303  SPHIFCSLINGLGSERKLNKALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAFKTV 362

Query: 1106 DEMRRCKIGPNTRTYDIILHHLIKARRMNEAYSMFQKVSNDFGCEPTVSTYEIMVRMFCN 1285
            +EMR   +GPN RTYDIILHHL + +R  EAY +++K+S    CEPTV TYEIMVRMFCN
Sbjct: 363  EEMRLKGVGPNARTYDIILHHLTRKQRTKEAYEVYKKMS----CEPTVGTYEIMVRMFCN 418

Query: 1286 EDRTDMALRVWDQMKAK 1336
            E+R DMA+++WD+MK K
Sbjct: 419  EERLDMAIKIWDEMKGK 435



 Score = 92.4 bits (228), Expect = 4e-16
 Identities = 61/312 (19%), Positives = 141/312 (45%), Gaps = 1/312 (0%)
 Frame = +2

Query: 383  KQNGLNHSAESYHGLIEALGKIKQFKMVWILVDELKNKGLLCK-DAFALVSRRYARARKV 559
            ++ G    +  ++ +++ L K +       + D++K K       ++ ++   + +   +
Sbjct: 191  EEYGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKIKKKRFEPDIKSYTILLEGWGQELNL 250

Query: 560  KEAIEAFERMEKYGLVHELQDFNRLLDTLCKSRQVGNAQDVFDKWKNRKFKPNIKSYTIL 739
                E +  M+  G   ++  +  +++  CK+++   A   F++ + R  KP+   +  L
Sbjct: 251  LRVNEVYGEMKDEGFEPDVVTYGIIINAHCKAKKYDEAVRFFNEMEQRNCKPSPHIFCSL 310

Query: 740  LEGWGQEKNLLRLNEVYREMEGDGIEPDVVSYGIMIHAHCKVKKYDEAIELLCELERKKI 919
            + G G E+ L +  E +   +  G   +  +Y  ++ A+C  ++ ++A + + E+  K +
Sbjct: 311  INGLGSERKLNKALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAFKTVEEMRLKGV 370

Query: 920  KVTPHVYCTLINGLGSEKRLDEANKYFELYKGSGFELEVFTFNAMVGAYCWSMRMDDAYK 1099
                  Y  +++ L  ++R  EA   +E+YK    E  V T+  MV  +C   R+D A K
Sbjct: 371  GPNARTYDIILHHLTRKQRTKEA---YEVYKKMSCEPTVGTYEIMVRMFCNEERLDMAIK 427

Query: 1100 LVDEMRRCKIGPNTRTYDIILHHLIKARRMNEAYSMFQKVSNDFGCEPTVSTYEIMVRMF 1279
            + DEM+   + P    +  ++  L    +++EA   F ++  D G  P    +  + +  
Sbjct: 428  IWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEML-DVGIRPPGQMFSRLKQTL 486

Query: 1280 CNEDRTDMALRV 1315
             +E R D  + +
Sbjct: 487  LDEGRKDKVVEL 498



 Score = 85.5 bits (210), Expect = 5e-14
 Identities = 64/251 (25%), Positives = 115/251 (45%), Gaps = 3/251 (1%)
 Frame = +2

Query: 383  KQNGLNHSAESYHGLIEALGKIKQFKMVWILVDELKNKGLLCKDA---FALVSRRYARAR 553
            K  G      +Y  +I A  K K++       +E++ +   CK +   F  +       R
Sbjct: 261  KDEGFEPDVVTYGIIINAHCKAKKYDEAVRFFNEMEQRN--CKPSPHIFCSLINGLGSER 318

Query: 554  KVKEAIEAFERMEKYGLVHELQDFNRLLDTLCKSRQVGNAQDVFDKWKNRKFKPNIKSYT 733
            K+ +A+E FER +  G   E   +N L+   C S+++ +A    ++ + +   PN ++Y 
Sbjct: 319  KLNKALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAFKTVEEMRLKGVGPNARTYD 378

Query: 734  ILLEGWGQEKNLLRLNEVYREMEGDGIEPDVVSYGIMIHAHCKVKKYDEAIELLCELERK 913
            I+L    +++      EVY++M     EP V +Y IM+   C  ++ D AI++  E++ K
Sbjct: 379  IILHHLTRKQRTKEAYEVYKKMS---CEPTVGTYEIMVRMFCNEERLDMAIKIWDEMKGK 435

Query: 914  KIKVTPHVYCTLINGLGSEKRLDEANKYFELYKGSGFELEVFTFNAMVGAYCWSMRMDDA 1093
             +    H++ +LI  L  E +LDEA +YF      G       F+ +        R D  
Sbjct: 436  GVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGQMFSRLKQTLLDEGRKDKV 495

Query: 1094 YKLVDEMRRCK 1126
             +L  +M R +
Sbjct: 496  VELAVKMDRLR 506



 Score = 76.6 bits (187), Expect = 2e-11
 Identities = 63/282 (22%), Positives = 127/282 (45%), Gaps = 3/282 (1%)
 Frame = +2

Query: 383  KQNGLNHSAESYHGLIEALGKIKQFKMVWILVDELKNKGLLCKDA-FALVSRRYARARKV 559
            K+       +SY  L+E  G+      V  +  E+K++G       + ++   + +A+K 
Sbjct: 226  KKKRFEPDIKSYTILLEGWGQELNLLRVNEVYGEMKDEGFEPDVVTYGIIINAHCKAKKY 285

Query: 560  KEAIEAFERMEKYGLVHELQDFNRLLDTLCKSRQVGNAQDVFDKWKNRKFKPNIKSYTIL 739
             EA+  F  ME+         F  L++ L   R++  A + F++ K+  F     +Y  L
Sbjct: 286  DEAVRFFNEMEQRNCKPSPHIFCSLINGLGSERKLNKALEFFERSKSSGFPLEAPTYNAL 345

Query: 740  LEGWGQEKNLLRLNEVYREMEGDGIEPDVVSYGIMIHAHCKVKKYDEAIELLCELERKKI 919
            +  +   + +    +   EM   G+ P+  +Y I++H   + ++  EA E+      KK+
Sbjct: 346  VGAYCWSQRMEDAFKTVEEMRLKGVGPNARTYDIILHHLTRKQRTKEAYEVY-----KKM 400

Query: 920  KVTPHV--YCTLINGLGSEKRLDEANKYFELYKGSGFELEVFTFNAMVGAYCWSMRMDDA 1093
               P V  Y  ++    +E+RLD A K ++  KG G    +  F++++ A C   ++D+A
Sbjct: 401  SCEPTVGTYEIMVRMFCNEERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEA 460

Query: 1094 YKLVDEMRRCKIGPNTRTYDIILHHLIKARRMNEAYSMFQKV 1219
             +  +EM    I P  + +  +   L+   R ++   +  K+
Sbjct: 461  CEYFNEMLDVGIRPPGQMFSRLKQTLLDEGRKDKVVELAVKM 502


>ref|XP_002531063.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223529358|gb|EEF31324.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 533

 Score =  491 bits (1265), Expect = e-136
 Identities = 237/377 (62%), Positives = 306/377 (81%), Gaps = 2/377 (0%)
 Frame = +2

Query: 212  EITQEAEKICKKLLKNSN--IGDALSSAKVNVSPLLVNEVIKKLNNSGVLALSFFRWAEK 385
            +I ++   IC+ L KN N  I   L  A   VSP LV EV+K+L+N+G LALSFF+WAEK
Sbjct: 80   KIIEDTRNICRLLSKNPNSSIEKLLLGASFKVSPALVLEVLKRLSNAGALALSFFKWAEK 139

Query: 386  QNGLNHSAESYHGLIEALGKIKQFKMVWILVDELKNKGLLCKDAFALVSRRYARARKVKE 565
            Q G  ++ ESY+ LI++LGKIKQF M+W LV+++K KG+L K+ FAL+SRRYAR+ KVKE
Sbjct: 140  QKGFMYNTESYNALIDSLGKIKQFNMIWNLVNDMKRKGVLTKETFALISRRYARSGKVKE 199

Query: 566  AIEAFERMEKYGLVHELQDFNRLLDTLCKSRQVGNAQDVFDKWKNRKFKPNIKSYTILLE 745
            A+  FE+MEK+GL  E  DFNRLLDTL KSRQV +AQ+VFDK K R+F P+IKSYTILLE
Sbjct: 200  AMNTFEKMEKFGLKIESTDFNRLLDTLIKSRQVLSAQNVFDKMKIRRFVPDIKSYTILLE 259

Query: 746  GWGQEKNLLRLNEVYREMEGDGIEPDVVSYGIMIHAHCKVKKYDEAIELLCELERKKIKV 925
            GWGQEKNLL+L+EVYREM+ +G EPDVV+YGI+I+A+CKV+KYD+AIEL  E+E K  + 
Sbjct: 260  GWGQEKNLLKLDEVYREMKDEGFEPDVVTYGILINAYCKVRKYDDAIELFREMESKNCQP 319

Query: 926  TPHVYCTLINGLGSEKRLDEANKYFELYKGSGFELEVFTFNAMVGAYCWSMRMDDAYKLV 1105
            +PH++CTLINGLGS +RL EA ++F   K SGF  E  T+NA+VGAYCWSMR+DDAY++V
Sbjct: 320  SPHIFCTLINGLGSVRRLSEALEFFRRSKASGFAPETPTYNAVVGAYCWSMRIDDAYRMV 379

Query: 1106 DEMRRCKIGPNTRTYDIILHHLIKARRMNEAYSMFQKVSNDFGCEPTVSTYEIMVRMFCN 1285
            DEMR+  +GPN+RTYDIILHHLIKA +  EA+S+F+K+S++  CEPTVSTY+I+VRMFCN
Sbjct: 380  DEMRKSGVGPNSRTYDIILHHLIKAEKTTEAFSVFEKMSSEEECEPTVSTYDIIVRMFCN 439

Query: 1286 EDRTDMALRVWDQMKAK 1336
             D+ + A++VWD+MKAK
Sbjct: 440  MDKVESAIKVWDRMKAK 456



 Score = 84.0 bits (206), Expect = 1e-13
 Identities = 62/253 (24%), Positives = 114/253 (45%), Gaps = 7/253 (2%)
 Frame = +2

Query: 383  KQNGLNHSAESYHGLIEALGKIKQFKMVWILVDELKNKGLLCKDA---FALVSRRYARAR 553
            K  G      +Y  LI A  K++++     L  E+++K   C+ +   F  +       R
Sbjct: 278  KDEGFEPDVVTYGILINAYCKVRKYDDAIELFREMESKN--CQPSPHIFCTLINGLGSVR 335

Query: 554  KVKEAIEAFERMEKYGLVHELQDFNRLLDTLCKSRQVGNAQDVFDKWKNRKFKPNIKSYT 733
            ++ EA+E F R +  G   E   +N ++   C S ++ +A  + D+ +     PN ++Y 
Sbjct: 336  RLSEALEFFRRSKASGFAPETPTYNAVVGAYCWSMRIDDAYRMVDEMRKSGVGPNSRTYD 395

Query: 734  ILLEGWGQEKNLLRLNEVYREMEGDG-IEPDVVSYGIMIHAHCKVKKYDEAIELLCELER 910
            I+L    + +       V+ +M  +   EP V +Y I++   C + K + AI++   ++ 
Sbjct: 396  IILHHLIKAEKTTEAFSVFEKMSSEEECEPTVSTYDIIVRMFCNMDKVESAIKVWDRMKA 455

Query: 911  KKIKVTPHVYCTLINGLGSEKRLDEANKYFELYKGSGFELEVFTFNAMVGAYCWSMRMDD 1090
            K +    H++  LIN L  E +LD A KYF+     G       F+ +  A     R D 
Sbjct: 456  KGVHPGMHMFSILINSLCHENKLDIACKYFQEMLDVGIRPPAALFSHLKQALIEDGRKDT 515

Query: 1091 AYKL---VDEMRR 1120
               L   +D++R+
Sbjct: 516  VVLLAQKIDKLRK 528


>ref|NP_177262.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75169669|sp|Q9C9A2.1|PP112_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At1g71060, mitochondrial; Flags: Precursor
            gi|12323433|gb|AAG51696.1|AC016972_15 hypothetical
            protein; 31939-30407 [Arabidopsis thaliana]
            gi|332197036|gb|AEE35157.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 510

 Score =  490 bits (1261), Expect = e-136
 Identities = 235/377 (62%), Positives = 302/377 (80%), Gaps = 2/377 (0%)
 Frame = +2

Query: 212  EITQEAEKICKKLLK--NSNIGDALSSAKVNVSPLLVNEVIKKLNNSGVLALSFFRWAEK 385
            + +Q+AE+ICK L K  +S +   L+ A V +SP L+ EV+KKL+N+GVLALS F+WAE 
Sbjct: 61   DASQDAERICKILTKFTDSKVETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAEN 120

Query: 386  QNGLNHSAESYHGLIEALGKIKQFKMVWILVDELKNKGLLCKDAFALVSRRYARARKVKE 565
            Q G  H+  +Y+ LIE+LGKIKQFK++W LVD++K K LL K+ FAL+SRRYARARKVKE
Sbjct: 121  QKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALISRRYARARKVKE 180

Query: 566  AIEAFERMEKYGLVHELQDFNRLLDTLCKSRQVGNAQDVFDKWKNRKFKPNIKSYTILLE 745
            AI AF +ME++G   E  DFNR+LDTL KSR VG+AQ VFDK K ++F+P+IKSYTILLE
Sbjct: 181  AIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLE 240

Query: 746  GWGQEKNLLRLNEVYREMEGDGIEPDVVSYGIMIHAHCKVKKYDEAIELLCELERKKIKV 925
            GWGQE NLLR++EV REM+ +G EPDVV+YGI+I+AHCK KKY+EAI    E+E++  K 
Sbjct: 241  GWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKP 300

Query: 926  TPHVYCTLINGLGSEKRLDEANKYFELYKGSGFELEVFTFNAMVGAYCWSMRMDDAYKLV 1105
            +PH++C+LINGLGSEK+L++A ++FE  K SGF LE  T+NA+VGAYCWS RM+DAYK V
Sbjct: 301  SPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTV 360

Query: 1106 DEMRRCKIGPNTRTYDIILHHLIKARRMNEAYSMFQKVSNDFGCEPTVSTYEIMVRMFCN 1285
            DEMR   +GPN RTYDIILHHLI+ +R  EAY ++Q +S    CEPTVSTYEIMVRMFCN
Sbjct: 361  DEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMS----CEPTVSTYEIMVRMFCN 416

Query: 1286 EDRTDMALRVWDQMKAK 1336
            ++R DMA+++WD+MK K
Sbjct: 417  KERLDMAIKIWDEMKGK 433



 Score = 85.9 bits (211), Expect = 4e-14
 Identities = 65/251 (25%), Positives = 114/251 (45%), Gaps = 3/251 (1%)
 Frame = +2

Query: 383  KQNGLNHSAESYHGLIEALGKIKQFKMVWILVDELKNKGLLCKDA---FALVSRRYARAR 553
            K  G      +Y  +I A  K K+++      +E++ +   CK +   F  +       +
Sbjct: 259  KDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRN--CKPSPHIFCSLINGLGSEK 316

Query: 554  KVKEAIEAFERMEKYGLVHELQDFNRLLDTLCKSRQVGNAQDVFDKWKNRKFKPNIKSYT 733
            K+ +A+E FER +  G   E   +N L+   C S+++ +A    D+ + +   PN ++Y 
Sbjct: 317  KLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYD 376

Query: 734  ILLEGWGQEKNLLRLNEVYREMEGDGIEPDVVSYGIMIHAHCKVKKYDEAIELLCELERK 913
            I+L    + +      EVY+ M     EP V +Y IM+   C  ++ D AI++  E++ K
Sbjct: 377  IILHHLIRMQRSKEAYEVYQTMS---CEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGK 433

Query: 914  KIKVTPHVYCTLINGLGSEKRLDEANKYFELYKGSGFELEVFTFNAMVGAYCWSMRMDDA 1093
             +    H++ +LI  L  E +LDEA +YF      G       F+ +        R D  
Sbjct: 434  GVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKV 493

Query: 1094 YKLVDEMRRCK 1126
              LV +M R +
Sbjct: 494  TDLVVKMDRLR 504



 Score = 75.9 bits (185), Expect = 4e-11
 Identities = 68/306 (22%), Positives = 139/306 (45%), Gaps = 6/306 (1%)
 Frame = +2

Query: 320  EVIKKLNNSGVLALSFFRWAEKQNGLNHSAESYHGLIEALGKIKQFKMVWILVDELKNKG 499
            + + K  N G     F +  +K+       +SY  L+E  G+      V  +  E+K++G
Sbjct: 205  DTLSKSRNVGDAQKVFDKMKKKR--FEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEG 262

Query: 500  LLCKD-AFALVSRRYARARKVKEAIEAFERMEKYGLVHELQDFNRLLDTLCKSRQVGNAQ 676
                  A+ ++   + +A+K +EAI  F  ME+         F  L++ L   +++ +A 
Sbjct: 263  FEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDAL 322

Query: 677  DVFDKWKNRKFKPNIKSYTILLEG--WGQEKNLLRLNEVYR---EMEGDGIEPDVVSYGI 841
            + F++ K+  F     +Y  L+    W Q     R+ + Y+   EM   G+ P+  +Y I
Sbjct: 323  EFFERSKSSGFPLEAPTYNALVGAYCWSQ-----RMEDAYKTVDEMRLKGVGPNARTYDI 377

Query: 842  MIHAHCKVKKYDEAIELLCELERKKIKVTPHVYCTLINGLGSEKRLDEANKYFELYKGSG 1021
            ++H   ++++  EA E+    +    + T   Y  ++    +++RLD A K ++  KG G
Sbjct: 378  ILHHLIRMQRSKEAYEVY---QTMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKG 434

Query: 1022 FELEVFTFNAMVGAYCWSMRMDDAYKLVDEMRRCKIGPNTRTYDIILHHLIKARRMNEAY 1201
                +  F++++ A C   ++D+A +  +EM    I P    +  +   L+   R ++  
Sbjct: 435  VLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVT 494

Query: 1202 SMFQKV 1219
             +  K+
Sbjct: 495  DLVVKM 500


>ref|XP_006390810.1| hypothetical protein EUTSA_v10018364mg [Eutrema salsugineum]
            gi|557087244|gb|ESQ28096.1| hypothetical protein
            EUTSA_v10018364mg [Eutrema salsugineum]
          Length = 548

 Score =  488 bits (1257), Expect = e-135
 Identities = 234/376 (62%), Positives = 302/376 (80%), Gaps = 2/376 (0%)
 Frame = +2

Query: 215  ITQEAEKICKKLLK--NSNIGDALSSAKVNVSPLLVNEVIKKLNNSGVLALSFFRWAEKQ 388
            ++Q+AE+ICK + K  +S++ + L  A V +SP L+ EV+KKL+N+GVLALS F+WAE Q
Sbjct: 100  VSQDAERICKIVSKISDSSVENLLDEASVKLSPALMEEVLKKLSNAGVLALSVFKWAENQ 159

Query: 389  NGLNHSAESYHGLIEALGKIKQFKMVWILVDELKNKGLLCKDAFALVSRRYARARKVKEA 568
             G  H+  SY+ LIE+LGKIKQFK+VW LVD++K K LL KD FAL+SRRYARARKVKEA
Sbjct: 160  KGFKHTTASYNTLIESLGKIKQFKLVWSLVDDMKQKKLLSKDTFALISRRYARARKVKEA 219

Query: 569  IEAFERMEKYGLVHELQDFNRLLDTLCKSRQVGNAQDVFDKWKNRKFKPNIKSYTILLEG 748
            I  F +ME YG   E  DFNR+LDTL KSR VG+AQ VFDK K ++F+P+IKSYTILLEG
Sbjct: 220  ITTFHKMEDYGFKMEPTDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEG 279

Query: 749  WGQEKNLLRLNEVYREMEGDGIEPDVVSYGIMIHAHCKVKKYDEAIELLCELERKKIKVT 928
            WGQE NLLR+NEVY EM+ +G EPDVV+YGI+I+AHCK KK+DEAI    E+E++  K +
Sbjct: 280  WGQELNLLRVNEVYGEMKDEGFEPDVVTYGIIINAHCKAKKHDEAIRFFNEMEQRNCKPS 339

Query: 929  PHVYCTLINGLGSEKRLDEANKYFELYKGSGFELEVFTFNAMVGAYCWSMRMDDAYKLVD 1108
            PH++C+LINGLGSEK+L +A ++FE  K SGF LE  T+NA+VGAYCWS RM+DA+K+V+
Sbjct: 340  PHIFCSLINGLGSEKKLTQALEFFERSKSSGFPLEAPTYNALVGAYCWSKRMEDAFKVVE 399

Query: 1109 EMRRCKIGPNTRTYDIILHHLIKARRMNEAYSMFQKVSNDFGCEPTVSTYEIMVRMFCNE 1288
            +MR   +GPN RTYDIILHHLI+ +R  EAY ++Q++S    CEPTVSTYEIMVRMFCN+
Sbjct: 400  QMRSKGVGPNARTYDIILHHLIRMQRTKEAYEVYQQMS----CEPTVSTYEIMVRMFCNK 455

Query: 1289 DRTDMALRVWDQMKAK 1336
            +R DMA+++WD+M+ K
Sbjct: 456  ERLDMAIKIWDEMRGK 471



 Score = 86.3 bits (212), Expect = 3e-14
 Identities = 64/251 (25%), Positives = 115/251 (45%), Gaps = 3/251 (1%)
 Frame = +2

Query: 383  KQNGLNHSAESYHGLIEALGKIKQFKMVWILVDELKNKGLLCKDA---FALVSRRYARAR 553
            K  G      +Y  +I A  K K+        +E++ +   CK +   F  +       +
Sbjct: 297  KDEGFEPDVVTYGIIINAHCKAKKHDEAIRFFNEMEQRN--CKPSPHIFCSLINGLGSEK 354

Query: 554  KVKEAIEAFERMEKYGLVHELQDFNRLLDTLCKSRQVGNAQDVFDKWKNRKFKPNIKSYT 733
            K+ +A+E FER +  G   E   +N L+   C S+++ +A  V ++ +++   PN ++Y 
Sbjct: 355  KLTQALEFFERSKSSGFPLEAPTYNALVGAYCWSKRMEDAFKVVEQMRSKGVGPNARTYD 414

Query: 734  ILLEGWGQEKNLLRLNEVYREMEGDGIEPDVVSYGIMIHAHCKVKKYDEAIELLCELERK 913
            I+L    + +      EVY++M     EP V +Y IM+   C  ++ D AI++  E+  K
Sbjct: 415  IILHHLIRMQRTKEAYEVYQQMS---CEPTVSTYEIMVRMFCNKERLDMAIKIWDEMRGK 471

Query: 914  KIKVTPHVYCTLINGLGSEKRLDEANKYFELYKGSGFELEVFTFNAMVGAYCWSMRMDDA 1093
             +    H++ +LI  +  E +LDEA +YF      G +     F+ +  A     R D  
Sbjct: 472  GVLPGMHMFSSLITAMCHENKLDEACEYFNEMLDVGIKAPGHMFSRLKQALLDEGRKDKV 531

Query: 1094 YKLVDEMRRCK 1126
              L  +M R +
Sbjct: 532  VDLAVKMDRLR 542


>gb|ESW15022.1| hypothetical protein PHAVU_007G037500g [Phaseolus vulgaris]
          Length = 523

 Score =  474 bits (1219), Expect = e-131
 Identities = 228/378 (60%), Positives = 297/378 (78%), Gaps = 2/378 (0%)
 Frame = +2

Query: 209  PEITQEAEKICKKLL--KNSNIGDALSSAKVNVSPLLVNEVIKKLNNSGVLALSFFRWAE 382
            P  T  AE IC+ L   ++S +  +L++  VN SP LV EV+ KL+N+G LALSFFRWAE
Sbjct: 69   PSSTPNAEAICRILSNSRDSTVDVSLAAVVVNPSPELVLEVLNKLSNAGTLALSFFRWAE 128

Query: 383  KQNGLNHSAESYHGLIEALGKIKQFKMVWILVDELKNKGLLCKDAFALVSRRYARARKVK 562
            +Q+   H+ E++H LIEALGKI+QFKM+W L+D++K + LL  D FALV+RRYARARKVK
Sbjct: 129  RQSEFKHTTETFHALIEALGKIRQFKMIWTLIDDMKQRKLLTSDTFALVARRYARARKVK 188

Query: 563  EAIEAFERMEKYGLVHELQDFNRLLDTLCKSRQVGNAQDVFDKWKNRKFKPNIKSYTILL 742
            EA E FE+ME+YGL   + DFNRL+D LCKS+ V  A +VFDK +     P+IKSYTILL
Sbjct: 189  EATEIFEKMERYGLKPHVTDFNRLIDVLCKSKCVEKAHEVFDKMRRLGLDPDIKSYTILL 248

Query: 743  EGWGQEKNLLRLNEVYREMEGDGIEPDVVSYGIMIHAHCKVKKYDEAIELLCELERKKIK 922
            EGW Q +NL +LNE+ REME  G + DVV+YGI+I+A+CK KK+DE I L  E++ K ++
Sbjct: 249  EGWSQLQNLTKLNELCREMEDKGFQIDVVAYGIIINAYCKAKKFDETIGLYHEMKAKGVR 308

Query: 923  VTPHVYCTLINGLGSEKRLDEANKYFELYKGSGFELEVFTFNAMVGAYCWSMRMDDAYKL 1102
             +PHVYCTLINGLGS+KRL++A ++FE+ K SGF  E  T+NA+VGAYCWSMRMDDAY++
Sbjct: 309  PSPHVYCTLINGLGSDKRLNQALEFFEVSKASGFAPEAPTYNAVVGAYCWSMRMDDAYRM 368

Query: 1103 VDEMRRCKIGPNTRTYDIILHHLIKARRMNEAYSMFQKVSNDFGCEPTVSTYEIMVRMFC 1282
            V EM++C IGPN+RT+DIILHHLIK  R+ EA ++F++++ +FGCEP+VSTYEIMVRMFC
Sbjct: 369  VGEMKKCGIGPNSRTFDIILHHLIKVGRIEEACTVFRRMNGEFGCEPSVSTYEIMVRMFC 428

Query: 1283 NEDRTDMALRVWDQMKAK 1336
            NE R DMA+ VWD+MK K
Sbjct: 429  NEVRLDMAMAVWDEMKEK 446



 Score = 80.9 bits (198), Expect = 1e-12
 Identities = 66/252 (26%), Positives = 115/252 (45%), Gaps = 6/252 (2%)
 Frame = +2

Query: 383  KQNGLNHSAESYHGLIEALGKIKQFKMVWILVDELKNKGLL-CKDAFALVSRRYARARKV 559
            +  G      +Y  +I A  K K+F     L  E+K KG+      +  +       +++
Sbjct: 268  EDKGFQIDVVAYGIIINAYCKAKKFDETIGLYHEMKAKGVRPSPHVYCTLINGLGSDKRL 327

Query: 560  KEAIEAFERMEKYGLVHELQDFNRLLDTLCKSRQVGNAQDVFDKWKNRKFKPNIKSYTIL 739
             +A+E FE  +  G   E   +N ++   C S ++ +A  +  + K     PN +++ I+
Sbjct: 328  NQALEFFEVSKASGFAPEAPTYNAVVGAYCWSMRMDDAYRMVGEMKKCGIGPNSRTFDII 387

Query: 740  LEGWGQEKNLLRLNEVYREMEGD-GIEPDVVSYGIMIHAHCKVKKYDEAIELLCELERKK 916
            L    +   +     V+R M G+ G EP V +Y IM+   C   + D A+ +  E++ K 
Sbjct: 388  LHHLIKVGRIEEACTVFRRMNGEFGCEPSVSTYEIMVRMFCNEVRLDMAMAVWDEMKEKG 447

Query: 917  IKVTPHVYCTLINGLGSEKRLDEANKYFELYKGSGFELEVFTFN----AMVGAYCWSMRM 1084
            I    H++ TLI  L  E +L+EA KYF+     G       F+    A+V A    + M
Sbjct: 448  ILPGVHMFSTLICSLCHENKLNEACKYFQEMLDVGIRPPAKMFSTLKEALVDARMEHVAM 507

Query: 1085 DDAYKLVDEMRR 1120
              A K +D++R+
Sbjct: 508  HFAMK-IDKLRK 518


>ref|XP_003535704.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
            mitochondrial-like [Glycine max]
          Length = 507

 Score =  473 bits (1217), Expect = e-131
 Identities = 226/379 (59%), Positives = 298/379 (78%), Gaps = 3/379 (0%)
 Frame = +2

Query: 209  PEITQEAEKICKKLLKN--SNIGDALSSAKVNVSPLLVNEVIKKLNNSGVLALSFFRWAE 382
            P  T +AE IC+ L     S +   L++     SP LV EV+ KL+N+GVLALSFFRWAE
Sbjct: 52   PRPTPDAEAICRILSTTPASTVDACLAAVPAKPSPELVLEVLNKLSNAGVLALSFFRWAE 111

Query: 383  KQNGLNHSAESYHGLIEALGKIKQFKMVWILVDELKNKGLLCKDAFALVSRRYARARKVK 562
            KQ+   H+ E++H LIEALGKI+QFKM+W LV+++K + LL  D F+LV+RRYARARK K
Sbjct: 112  KQSEFKHTTEAFHALIEALGKIRQFKMIWTLVNDMKQRKLLTSDTFSLVARRYARARKAK 171

Query: 563  EAIEAFERMEKYGLVHELQDFNRLLDTLCKSRQVGNAQDVFDKWKNRKFKPNIKSYTILL 742
            EAI+ FE+ME YGL   + DFN+L+D LCKS+ V  A +VFDK +  +  P+IKSYTILL
Sbjct: 172  EAIKTFEKMEHYGLKPHVSDFNKLVDVLCKSKSVEEAHEVFDKMRKLRLDPDIKSYTILL 231

Query: 743  EGWGQEKNLLRLNEVYREMEGDGIEPDVVSYGIMIHAHCKVKKYDEAIELLCELERKKIK 922
            EGW Q++NL+++NEV REME  G + DVV+YGI+++AHCK KK+DEAI L  E++ + ++
Sbjct: 232  EGWSQQQNLIKVNEVCREMEDKGFQLDVVAYGIIMNAHCKAKKFDEAIGLYHEMKARGVR 291

Query: 923  VTPHVYCTLINGLGSEKRLDEANKYFELYKGSGFELEVFTFNAMVGAYCWSMRMDDAYKL 1102
             +PHVYCTLINGLGS+KRLDEA ++FE+ K SGF  E  T+NA+VGAYCWS+RMDDAY++
Sbjct: 292  PSPHVYCTLINGLGSDKRLDEALEFFEVSKASGFVPEAPTYNAVVGAYCWSLRMDDAYRM 351

Query: 1103 VDEMRRCKIGPNTRTYDIILHHLIKARRMNEAYSMFQKVS-NDFGCEPTVSTYEIMVRMF 1279
            V EM++C IGPN+RT+DI+LHHLIK RR+ EA S+F++++  +FGCEP+VSTYEIMVRMF
Sbjct: 352  VGEMKKCGIGPNSRTFDIVLHHLIKGRRIEEASSVFRRMNGGEFGCEPSVSTYEIMVRMF 411

Query: 1280 CNEDRTDMALRVWDQMKAK 1336
            CNE+  DMA+ VWD+MK K
Sbjct: 412  CNEELLDMAVAVWDEMKGK 430



 Score = 81.3 bits (199), Expect = 9e-13
 Identities = 56/210 (26%), Positives = 100/210 (47%), Gaps = 3/210 (1%)
 Frame = +2

Query: 383  KQNGLNHSAESYHGLIEALGKIKQFKMVWILVDELKNKGLL-CKDAFALVSRRYARARKV 559
            +  G      +Y  ++ A  K K+F     L  E+K +G+      +  +       +++
Sbjct: 251  EDKGFQLDVVAYGIIMNAHCKAKKFDEAIGLYHEMKARGVRPSPHVYCTLINGLGSDKRL 310

Query: 560  KEAIEAFERMEKYGLVHELQDFNRLLDTLCKSRQVGNAQDVFDKWKNRKFKPNIKSYTIL 739
             EA+E FE  +  G V E   +N ++   C S ++ +A  +  + K     PN +++ I+
Sbjct: 311  DEALEFFEVSKASGFVPEAPTYNAVVGAYCWSLRMDDAYRMVGEMKKCGIGPNSRTFDIV 370

Query: 740  LEGWGQEKNLLRLNEVYREMEGD--GIEPDVVSYGIMIHAHCKVKKYDEAIELLCELERK 913
            L    + + +   + V+R M G   G EP V +Y IM+   C  +  D A+ +  E++ K
Sbjct: 371  LHHLIKGRRIEEASSVFRRMNGGEFGCEPSVSTYEIMVRMFCNEELLDMAVAVWDEMKGK 430

Query: 914  KIKVTPHVYCTLINGLGSEKRLDEANKYFE 1003
             I    H++ TL+  L  E +LDEA KYF+
Sbjct: 431  GILPGMHMFSTLVCALCHESKLDEACKYFQ 460



 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 49/196 (25%), Positives = 87/196 (44%), Gaps = 3/196 (1%)
 Frame = +2

Query: 383 KQNGLNHSAESYHGLIEALGKIKQFKMVWILVDELKNKGLLCK-DAFALVSRRYARARKV 559
           K  G+  S   Y  LI  LG  K+        +  K  G + +   +  V   Y  + ++
Sbjct: 286 KARGVRPSPHVYCTLINGLGSDKRLDEALEFFEVSKASGFVPEAPTYNAVVGAYCWSLRM 345

Query: 560 KEAIEAFERMEKYGLVHELQDFNRLLDTLCKSRQVGNAQDVFDKWKNRKF--KPNIKSYT 733
            +A      M+K G+    + F+ +L  L K R++  A  VF +    +F  +P++ +Y 
Sbjct: 346 DDAYRMVGEMKKCGIGPNSRTFDIVLHHLIKGRRIEEASSVFRRMNGGEFGCEPSVSTYE 405

Query: 734 ILLEGWGQEKNLLRLNEVYREMEGDGIEPDVVSYGIMIHAHCKVKKYDEAIELLCELERK 913
           I++  +  E+ L     V+ EM+G GI P +  +  ++ A C   K DEA +   E+   
Sbjct: 406 IMVRMFCNEELLDMAVAVWDEMKGKGILPGMHMFSTLVCALCHESKLDEACKYFQEMLDV 465

Query: 914 KIKVTPHVYCTLINGL 961
            I+    ++ TL   L
Sbjct: 466 GIRPPAKMFSTLKEAL 481


>ref|XP_006605955.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
            mitochondrial-like [Glycine max]
          Length = 512

 Score =  463 bits (1192), Expect = e-128
 Identities = 221/378 (58%), Positives = 295/378 (78%), Gaps = 2/378 (0%)
 Frame = +2

Query: 209  PEITQEAEKICKKL--LKNSNIGDALSSAKVNVSPLLVNEVIKKLNNSGVLALSFFRWAE 382
            P  T +AE IC+ L   +   +  +L++     SP LV EV+ +L+N+GVLALSFFRWAE
Sbjct: 58   PRPTPDAEAICRILSTTRGFTVDASLAAVSAKPSPELVLEVLNRLSNAGVLALSFFRWAE 117

Query: 383  KQNGLNHSAESYHGLIEALGKIKQFKMVWILVDELKNKGLLCKDAFALVSRRYARARKVK 562
            KQ+   ++ E++H LIE LGKI+QFKM+W LV+ +K + LL  + FALV+RRYARARK K
Sbjct: 118  KQSEFKYTTEAFHALIEGLGKIRQFKMIWTLVNGMKQRKLLTSETFALVARRYARARKAK 177

Query: 563  EAIEAFERMEKYGLVHELQDFNRLLDTLCKSRQVGNAQDVFDKWKNRKFKPNIKSYTILL 742
            EAIE FE+ME+YGL     DFNRL+D LCKS+ V  A +VFDK ++ +  P+IKSYTILL
Sbjct: 178  EAIETFEKMEQYGLKPHASDFNRLVDVLCKSKCVEEAHEVFDKMRHLRLDPDIKSYTILL 237

Query: 743  EGWGQEKNLLRLNEVYREMEGDGIEPDVVSYGIMIHAHCKVKKYDEAIELLCELERKKIK 922
            EGW Q++NL+++NEV REME  G + DVV+YGI+++A+CK KK+D+AI L  E++ K ++
Sbjct: 238  EGWSQQQNLIKVNEVCREMEDKGFQLDVVAYGIIMNAYCKAKKFDDAIGLYHEMKAKGLR 297

Query: 923  VTPHVYCTLINGLGSEKRLDEANKYFELYKGSGFELEVFTFNAMVGAYCWSMRMDDAYKL 1102
             +PHVYCTLI GLGS KRLDEA ++FE+ K SGF  E  T+NA+VGAYCWS+RMDDAY++
Sbjct: 298  PSPHVYCTLIKGLGSHKRLDEALEFFEVSKASGFAPEAPTYNAVVGAYCWSLRMDDAYRM 357

Query: 1103 VDEMRRCKIGPNTRTYDIILHHLIKARRMNEAYSMFQKVSNDFGCEPTVSTYEIMVRMFC 1282
            V EM++C IGPN+RT+DIILHHLI+ RR+ EA S+FQ++S +FGC+ +V+TYEIMVRM C
Sbjct: 358  VGEMKKCGIGPNSRTFDIILHHLIEGRRVEEACSVFQRMSGEFGCKASVTTYEIMVRMLC 417

Query: 1283 NEDRTDMALRVWDQMKAK 1336
            NE+R DMA+ VWD+MK K
Sbjct: 418  NEERLDMAVAVWDEMKGK 435



 Score = 80.1 bits (196), Expect = 2e-12
 Identities = 64/252 (25%), Positives = 117/252 (46%), Gaps = 6/252 (2%)
 Frame = +2

Query: 383  KQNGLNHSAESYHGLIEALGKIKQFKMVWILVDELKNKGLL-CKDAFALVSRRYARARKV 559
            +  G      +Y  ++ A  K K+F     L  E+K KGL      +  + +     +++
Sbjct: 257  EDKGFQLDVVAYGIIMNAYCKAKKFDDAIGLYHEMKAKGLRPSPHVYCTLIKGLGSHKRL 316

Query: 560  KEAIEAFERMEKYGLVHELQDFNRLLDTLCKSRQVGNAQDVFDKWKNRKFKPNIKSYTIL 739
             EA+E FE  +  G   E   +N ++   C S ++ +A  +  + K     PN +++ I+
Sbjct: 317  DEALEFFEVSKASGFAPEAPTYNAVVGAYCWSLRMDDAYRMVGEMKKCGIGPNSRTFDII 376

Query: 740  LEGWGQEKNLLRLNEVYREMEGD-GIEPDVVSYGIMIHAHCKVKKYDEAIELLCELERKK 916
            L    + + +     V++ M G+ G +  V +Y IM+   C  ++ D A+ +  E++ K 
Sbjct: 377  LHHLIEGRRVEEACSVFQRMSGEFGCKASVTTYEIMVRMLCNEERLDMAVAVWDEMKGKG 436

Query: 917  IKVTPHVYCTLINGLGSEKRLDEANKYFELYKGSGFELEVFTFN----AMVGAYCWSMRM 1084
            I    H++ TL+  L  E +LDEA KYF+     G       F+    A+V A    + M
Sbjct: 437  ILPGMHLFSTLVCALCHESKLDEACKYFQEMLDVGIRPPAKMFSTLKEALVDARMEHIAM 496

Query: 1085 DDAYKLVDEMRR 1120
              A K +D++R+
Sbjct: 497  HFAMK-IDKLRK 507