BLASTX nr result
ID: Atropa21_contig00005768
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00005768
(969 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006598988.1| PREDICTED: DNA cross-link repair protein SNM... 77 1e-32
ref|XP_006844683.1| hypothetical protein AMTR_s00016p00244350 [A... 77 2e-32
ref|XP_002447746.1| hypothetical protein SORBIDRAFT_06g014970 [S... 80 3e-29
gb|AFW58146.1| hypothetical protein ZEAMMB73_659537 [Zea mays] g... 78 2e-28
ref|NP_001131576.1| uncharacterized protein LOC100192920 [Zea ma... 78 2e-28
ref|XP_003581158.1| PREDICTED: LOW QUALITY PROTEIN: DNA cross-li... 60 2e-23
ref|XP_001783805.1| predicted protein [Physcomitrella patens] gi... 72 3e-22
ref|XP_006338813.1| PREDICTED: DNA cross-link repair protein SNM... 111 5e-22
ref|XP_003548485.1| PREDICTED: DNA cross-link repair protein SNM... 82 8e-22
ref|XP_002321063.2| hypothetical protein POPTR_0014s13570g [Popu... 84 2e-21
gb|EOY02997.1| DNA repair metallo-beta-lactamase family protein ... 86 2e-21
gb|ESW33793.1| hypothetical protein PHAVU_001G099100g [Phaseolus... 80 2e-21
ref|XP_006468937.1| PREDICTED: DNA cross-link repair protein SNM... 82 3e-21
ref|XP_006446878.1| hypothetical protein CICLE_v10015161mg [Citr... 82 3e-21
ref|XP_006598989.1| PREDICTED: DNA cross-link repair protein SNM... 79 5e-21
ref|XP_004493109.1| PREDICTED: DNA cross-link repair protein SNM... 84 9e-20
gb|EEE60929.1| hypothetical protein OsJ_14663 [Oryza sativa Japo... 82 3e-18
ref|NP_001052690.1| Os04g0401800 [Oryza sativa Japonica Group] g... 82 3e-18
ref|XP_003624539.1| DNA cross-link repair protein SNM1 [Medicago... 84 4e-18
ref|XP_004975484.1| PREDICTED: LOW QUALITY PROTEIN: DNA cross-li... 55 5e-18
>ref|XP_006598988.1| PREDICTED: DNA cross-link repair protein SNM1-like isoform X2
[Glycine max]
Length = 503
Score = 77.0 bits (188), Expect(3) = 1e-32
Identities = 36/54 (66%), Positives = 46/54 (85%), Gaps = 1/54 (1%)
Frame = -1
Query: 696 SLFMVGVPYSDHSSFTELQEFVQFLRPEKIIPTVNFGN-VHRGKMQSHFQQWLK 538
++ + GVPYS+HSSF+ELQ+FVQ LRP+KIIPTVN GN +R KMQS+F+ WLK
Sbjct: 449 NITIYGVPYSEHSSFSELQDFVQVLRPDKIIPTVNVGNAANREKMQSYFRDWLK 502
Score = 61.2 bits (147), Expect(3) = 1e-32
Identities = 27/38 (71%), Positives = 32/38 (84%)
Frame = -3
Query: 796 QYTSMLAFRPTGWTYSETIGENLNLIKPTSKRNITIYG 683
Q+T++LAFRPTGWT+SE I +L LIKP SK NITIYG
Sbjct: 417 QFTAILAFRPTGWTFSEKISNDLELIKPVSKGNITIYG 454
Score = 49.7 bits (117), Expect(3) = 1e-32
Identities = 22/36 (61%), Positives = 28/36 (77%)
Frame = -2
Query: 968 VKIYANASRRCILRSFGWAGISENLSTNGKDAPLHI 861
VKIYANASRR IL++FGW +S+ L TNG + LH+
Sbjct: 363 VKIYANASRRRILQAFGWPDLSDKLCTNGNNTLLHV 398
>ref|XP_006844683.1| hypothetical protein AMTR_s00016p00244350 [Amborella trichopoda]
gi|548847154|gb|ERN06358.1| hypothetical protein
AMTR_s00016p00244350 [Amborella trichopoda]
Length = 479
Score = 77.4 bits (189), Expect(3) = 2e-32
Identities = 36/54 (66%), Positives = 45/54 (83%), Gaps = 1/54 (1%)
Frame = -1
Query: 696 SLFMVGVPYSDHSSFTELQEFVQFLRPEKIIPTVNFGN-VHRGKMQSHFQQWLK 538
++ + GVPYS+HSSFTEL++FVQFLRPEKIIPTVN G R +M SHF++WLK
Sbjct: 425 NITIYGVPYSEHSSFTELRDFVQFLRPEKIIPTVNVGKAAARDQMHSHFREWLK 478
Score = 63.9 bits (154), Expect(3) = 2e-32
Identities = 29/38 (76%), Positives = 32/38 (84%)
Frame = -3
Query: 796 QYTSMLAFRPTGWTYSETIGENLNLIKPTSKRNITIYG 683
QY S+LAFRPTGWT+SE IG L+LIKP SK NITIYG
Sbjct: 393 QYLSVLAFRPTGWTFSEKIGSQLDLIKPNSKGNITIYG 430
Score = 45.8 bits (107), Expect(3) = 2e-32
Identities = 17/36 (47%), Positives = 29/36 (80%)
Frame = -2
Query: 968 VKIYANASRRCILRSFGWAGISENLSTNGKDAPLHI 861
V+IY ++SR+ IL+S+GW+G+ + L ++GK PLH+
Sbjct: 337 VQIYVDSSRKRILQSYGWSGLDKRLCSDGKSTPLHV 372
>ref|XP_002447746.1| hypothetical protein SORBIDRAFT_06g014970 [Sorghum bicolor]
gi|241938929|gb|EES12074.1| hypothetical protein
SORBIDRAFT_06g014970 [Sorghum bicolor]
Length = 496
Score = 79.7 bits (195), Expect(3) = 3e-29
Identities = 36/54 (66%), Positives = 46/54 (85%), Gaps = 1/54 (1%)
Frame = -1
Query: 696 SLFMVGVPYSDHSSFTELQEFVQFLRPEKIIPTVNFGN-VHRGKMQSHFQQWLK 538
S+ + GVPYS+HSSFTEL++FV FLRP+K+IPTVN GN R KMQ+HF++WLK
Sbjct: 441 SVTIYGVPYSEHSSFTELRDFVMFLRPQKVIPTVNVGNATSRDKMQAHFREWLK 494
Score = 55.8 bits (133), Expect(3) = 3e-29
Identities = 22/40 (55%), Positives = 34/40 (85%)
Frame = -3
Query: 802 TGQYTSMLAFRPTGWTYSETIGENLNLIKPTSKRNITIYG 683
+G++ ++LAFRPTGWT+SE G++L+LIKP+ ++TIYG
Sbjct: 407 SGRFLAVLAFRPTGWTFSEATGKHLDLIKPSCNGSVTIYG 446
Score = 41.2 bits (95), Expect(3) = 3e-29
Identities = 17/36 (47%), Positives = 26/36 (72%)
Frame = -2
Query: 968 VKIYANASRRCILRSFGWAGISENLSTNGKDAPLHI 861
V IY +ASRR IL SFGW+ +S+ + + + +PLH+
Sbjct: 353 VPIYTDASRRRILHSFGWSDLSKRICSCNQSSPLHV 388
>gb|AFW58146.1| hypothetical protein ZEAMMB73_659537 [Zea mays]
gi|413918215|gb|AFW58147.1| hypothetical protein
ZEAMMB73_659537 [Zea mays]
Length = 505
Score = 77.8 bits (190), Expect(3) = 2e-28
Identities = 35/49 (71%), Positives = 43/49 (87%), Gaps = 1/49 (2%)
Frame = -1
Query: 681 GVPYSDHSSFTELQEFVQFLRPEKIIPTVNFGN-VHRGKMQSHFQQWLK 538
GVPYS+HSSFTEL++FV FL+P+KIIPTVN GN R KMQ+HF++WLK
Sbjct: 455 GVPYSEHSSFTELRDFVMFLKPQKIIPTVNVGNATSRDKMQAHFREWLK 503
Score = 59.7 bits (143), Expect(3) = 2e-28
Identities = 24/39 (61%), Positives = 34/39 (87%)
Frame = -3
Query: 799 GQYTSMLAFRPTGWTYSETIGENLNLIKPTSKRNITIYG 683
G++ ++LAFRPTGWT+SE G++L+LIKP+S N+TIYG
Sbjct: 417 GRFLAVLAFRPTGWTFSEATGKHLDLIKPSSNANVTIYG 455
Score = 36.6 bits (83), Expect(3) = 2e-28
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 4/42 (9%)
Frame = -2
Query: 962 IYANASRRCILRSFGWAGISENLSTNGKDAPLHIF----LNH 849
IY +ASRR IL SFGW +S+ L + + + LH+ +NH
Sbjct: 364 IYTDASRRRILYSFGWPDLSKRLCSCNQSSSLHVLPLGSINH 405
>ref|NP_001131576.1| uncharacterized protein LOC100192920 [Zea mays]
gi|194691900|gb|ACF80034.1| unknown [Zea mays]
Length = 280
Score = 77.8 bits (190), Expect(3) = 2e-28
Identities = 35/49 (71%), Positives = 43/49 (87%), Gaps = 1/49 (2%)
Frame = -1
Query: 681 GVPYSDHSSFTELQEFVQFLRPEKIIPTVNFGN-VHRGKMQSHFQQWLK 538
GVPYS+HSSFTEL++FV FL+P+KIIPTVN GN R KMQ+HF++WLK
Sbjct: 230 GVPYSEHSSFTELRDFVMFLKPQKIIPTVNVGNATSRDKMQAHFREWLK 278
Score = 59.7 bits (143), Expect(3) = 2e-28
Identities = 24/39 (61%), Positives = 34/39 (87%)
Frame = -3
Query: 799 GQYTSMLAFRPTGWTYSETIGENLNLIKPTSKRNITIYG 683
G++ ++LAFRPTGWT+SE G++L+LIKP+S N+TIYG
Sbjct: 192 GRFLAVLAFRPTGWTFSEATGKHLDLIKPSSNANVTIYG 230
Score = 36.6 bits (83), Expect(3) = 2e-28
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 4/42 (9%)
Frame = -2
Query: 962 IYANASRRCILRSFGWAGISENLSTNGKDAPLHIF----LNH 849
IY +ASRR IL SFGW +S+ L + + + LH+ +NH
Sbjct: 139 IYTDASRRRILYSFGWPDLSKRLCSCNQSSSLHVLPLGSINH 180
>ref|XP_003581158.1| PREDICTED: LOW QUALITY PROTEIN: DNA cross-link repair protein
SNM1-like [Brachypodium distachyon]
Length = 512
Score = 59.7 bits (143), Expect(3) = 2e-23
Identities = 24/33 (72%), Positives = 32/33 (96%)
Frame = -1
Query: 681 GVPYSDHSSFTELQEFVQFLRPEKIIPTVNFGN 583
GVPYS+HSSFTEL++F++F+RP+K+IPTVN GN
Sbjct: 430 GVPYSEHSSFTELRDFLKFVRPQKVIPTVNVGN 462
Score = 55.1 bits (131), Expect(3) = 2e-23
Identities = 22/38 (57%), Positives = 32/38 (84%)
Frame = -3
Query: 796 QYTSMLAFRPTGWTYSETIGENLNLIKPTSKRNITIYG 683
++ ++LAFRPTGWT+SE G+ L+LIKP+S+ +TIYG
Sbjct: 393 RFLAVLAFRPTGWTFSEAAGKELDLIKPSSRGRVTIYG 430
Score = 42.0 bits (97), Expect(3) = 2e-23
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = -2
Query: 968 VKIYANASRRCILRSFGWAGISENLSTNGKDAPLHI 861
V IY +ASRR IL SFGW +S+ +S+ + +PLH+
Sbjct: 337 VPIYTDASRRRILHSFGWPDLSKRISSCDQSSPLHV 372
>ref|XP_001783805.1| predicted protein [Physcomitrella patens]
gi|162664687|gb|EDQ51397.1| predicted protein
[Physcomitrella patens]
Length = 334
Score = 72.4 bits (176), Expect(3) = 3e-22
Identities = 31/49 (63%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
Frame = -1
Query: 681 GVPYSDHSSFTELQEFVQFLRPEKIIPTVNFGN-VHRGKMQSHFQQWLK 538
GVPYS+HSS++ELQEFV+FLRP+K++ TVN G HR M++HF++WLK
Sbjct: 285 GVPYSEHSSYSELQEFVKFLRPQKVLATVNVGRAAHRESMEAHFKKWLK 333
Score = 53.9 bits (128), Expect(3) = 3e-22
Identities = 23/37 (62%), Positives = 29/37 (78%)
Frame = -3
Query: 793 YTSMLAFRPTGWTYSETIGENLNLIKPTSKRNITIYG 683
Y+++LAFRPTGWTYSE IG NL+ +KP +TIYG
Sbjct: 249 YSAVLAFRPTGWTYSEKIGSNLSELKPQRSGVVTIYG 285
Score = 26.6 bits (57), Expect(3) = 3e-22
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = -2
Query: 968 VKIYANASRRCILRSFGWAGISENLSTNGKDAPLHI 861
++IYA+ R LR+ W +++ L ++ + LH+
Sbjct: 192 LRIYADKRRVRTLRALDWPDLTDRLCSDASSSRLHV 227
>ref|XP_006338813.1| PREDICTED: DNA cross-link repair protein SNM1-like [Solanum
tuberosum]
Length = 413
Score = 111 bits (277), Expect = 5e-22
Identities = 71/138 (51%), Positives = 89/138 (64%), Gaps = 10/138 (7%)
Frame = -1
Query: 921 WLGWNF*KSVNKRERCTFAHI-PKSSLRFEMLQCYLASQDGQDSTLAC-----WHSDQQV 760
W+G + S N ++ T HI P SSLRFE+LQ YLASQDGQ +++ W + +
Sbjct: 288 WVGISENLSTNGKD--TPLHILPISSLRFEILQRYLASQDGQYTSMLSFRPTGWTYSETI 345
Query: 759 GLTQRPSGRI*T**NLLLRETS---LFMVGVPYSDHSSFTELQEFVQFLRPEKIIPTVNF 589
G L++ TS + + GVPYS+HS+F ELQEFVQFLRPEKIIPTVN
Sbjct: 346 GENLN-----------LIKPTSKGNITIYGVPYSEHSNFIELQEFVQFLRPEKIIPTVNV 394
Query: 588 GN-VHRGKMQSHFQQWLK 538
GN V+RGKMQS+FQQWLK
Sbjct: 395 GNAVNRGKMQSYFQQWLK 412
Score = 69.7 bits (169), Expect = 2e-09
Identities = 33/36 (91%), Positives = 33/36 (91%)
Frame = -2
Query: 968 VKIYANASRRCILRSFGWAGISENLSTNGKDAPLHI 861
VKIYANASRR ILRSFGW GISENLSTNGKD PLHI
Sbjct: 271 VKIYANASRRRILRSFGWVGISENLSTNGKDTPLHI 306
>ref|XP_003548485.1| PREDICTED: DNA cross-link repair protein SNM1-like isoform X1
[Glycine max]
Length = 505
Score = 81.6 bits (200), Expect(2) = 8e-22
Identities = 54/121 (44%), Positives = 74/121 (61%), Gaps = 9/121 (7%)
Frame = -1
Query: 873 TFAHI-PKSSLRFEMLQCYLASQDGQDSTLACWHSDQQVGLTQRPSG-----RI*T**NL 712
T H+ P SSLR E L+ YL + Q + + L RP+G +I L
Sbjct: 394 TLLHVLPMSSLRVETLKDYLKTYKEQFTAI----------LAFRPTGWTFSEKISNDLEL 443
Query: 711 L--LRETSLFMVGVPYSDHSSFTELQEFVQFLRPEKIIPTVNFGN-VHRGKMQSHFQQWL 541
+ + + ++ + GVPYS+HSSF+ELQ+FVQ LRP+KIIPTVN GN +R KMQS+F+ WL
Sbjct: 444 IKPVSKGNITIYGVPYSEHSSFSELQDFVQVLRPDKIIPTVNVGNAANREKMQSYFRDWL 503
Query: 540 K 538
K
Sbjct: 504 K 504
Score = 49.7 bits (117), Expect(2) = 8e-22
Identities = 22/36 (61%), Positives = 28/36 (77%)
Frame = -2
Query: 968 VKIYANASRRCILRSFGWAGISENLSTNGKDAPLHI 861
VKIYANASRR IL++FGW +S+ L TNG + LH+
Sbjct: 363 VKIYANASRRRILQAFGWPDLSDKLCTNGNNTLLHV 398
>ref|XP_002321063.2| hypothetical protein POPTR_0014s13570g [Populus trichocarpa]
gi|550324134|gb|EEE99378.2| hypothetical protein
POPTR_0014s13570g [Populus trichocarpa]
Length = 477
Score = 84.3 bits (207), Expect(2) = 2e-21
Identities = 51/117 (43%), Positives = 72/117 (61%), Gaps = 9/117 (7%)
Frame = -1
Query: 861 IPKSSLRFEMLQCYLASQDGQDSTLAC-----WHSDQQVGLTQ---RPSGRI*T**NLLL 706
+P SSLR+E L+ YL + Q + + W + +G RPS R
Sbjct: 371 LPISSLRYETLKDYLKNHVNQYAAVLAFRPTGWTYSEGLGRELDLIRPSTR--------- 421
Query: 705 RETSLFMVGVPYSDHSSFTELQEFVQFLRPEKIIPTVNFGNV-HRGKMQSHFQQWLK 538
++ + GVPYS+HSSFTEL++FV+FL+P+KIIPTVN GN +R KMQS+F++WLK
Sbjct: 422 --GNITIYGVPYSEHSSFTELRDFVEFLKPDKIIPTVNVGNPDNRDKMQSYFREWLK 476
Score = 45.8 bits (107), Expect(2) = 2e-21
Identities = 22/36 (61%), Positives = 25/36 (69%)
Frame = -2
Query: 968 VKIYANASRRCILRSFGWAGISENLSTNGKDAPLHI 861
VKIYAN SRR IL+SFGW +S NL T D LH+
Sbjct: 335 VKIYANNSRRRILQSFGWPDLSTNLCTKAIDTCLHV 370
>gb|EOY02997.1| DNA repair metallo-beta-lactamase family protein isoform 1
[Theobroma cacao]
Length = 461
Score = 85.5 bits (210), Expect(2) = 2e-21
Identities = 55/122 (45%), Positives = 71/122 (58%), Gaps = 10/122 (8%)
Frame = -1
Query: 873 TFAHI-PKSSLRFEMLQCYLASQDGQDSTLAC-----WHSDQQVGLTQ---RPSGRI*T* 721
T H+ P SSLR E L+ YL + + + W + +G RP R
Sbjct: 350 TLLHVLPISSLRIETLKDYLKTYRKNYAAVLAFRPTGWTYSENIGNQLDLIRPISR---- 405
Query: 720 *NLLLRETSLFMVGVPYSDHSSFTELQEFVQFLRPEKIIPTVNFGN-VHRGKMQSHFQQW 544
++ + GVPYS+HSSFTEL+EFVQFLRP+KIIPTVN GN +R KMQS+F+QW
Sbjct: 406 -------GNVTIYGVPYSEHSSFTELREFVQFLRPDKIIPTVNVGNATNRDKMQSYFRQW 458
Query: 543 LK 538
LK
Sbjct: 459 LK 460
Score = 44.7 bits (104), Expect(2) = 2e-21
Identities = 20/36 (55%), Positives = 27/36 (75%)
Frame = -2
Query: 968 VKIYANASRRCILRSFGWAGISENLSTNGKDAPLHI 861
VKI+AN SRR IL+SF W +S +L ++GKD LH+
Sbjct: 319 VKIFANTSRRRILQSFDWPELSSSLCSDGKDTLLHV 354
>gb|ESW33793.1| hypothetical protein PHAVU_001G099100g [Phaseolus vulgaris]
Length = 164
Score = 80.5 bits (197), Expect(2) = 2e-21
Identities = 54/121 (44%), Positives = 74/121 (61%), Gaps = 9/121 (7%)
Frame = -1
Query: 873 TFAHI-PKSSLRFEMLQCYLASQDGQDSTLACWHSDQQVGLTQRPSG-----RI*T**NL 712
T H+ P +SLR E L+ YL + Q + + L RP+G +I L
Sbjct: 53 TLIHVLPMASLRPETLKDYLKTYKEQFTAV----------LAFRPTGWTFSEKISNDLEL 102
Query: 711 LLRET--SLFMVGVPYSDHSSFTELQEFVQFLRPEKIIPTVNFGN-VHRGKMQSHFQQWL 541
+ T ++ + GVPYS+HSSFTEL++FVQFLRP+KIIPTVN GN +R KMQS+F+ WL
Sbjct: 103 IKPVTKGNITIYGVPYSEHSSFTELRDFVQFLRPDKIIPTVNVGNAANREKMQSYFRDWL 162
Query: 540 K 538
+
Sbjct: 163 R 163
Score = 49.7 bits (117), Expect(2) = 2e-21
Identities = 21/36 (58%), Positives = 29/36 (80%)
Frame = -2
Query: 968 VKIYANASRRCILRSFGWAGISENLSTNGKDAPLHI 861
VKIYANASRR IL++FGW+ +S+ L TNG + +H+
Sbjct: 22 VKIYANASRRRILQAFGWSDLSDRLCTNGNNTLIHV 57
>ref|XP_006468937.1| PREDICTED: DNA cross-link repair protein SNM1-like isoform X1
[Citrus sinensis]
Length = 464
Score = 81.6 bits (200), Expect(2) = 3e-21
Identities = 54/121 (44%), Positives = 68/121 (56%), Gaps = 10/121 (8%)
Frame = -1
Query: 873 TFAHI-PKSSLRFEMLQCYLASQDGQDSTLAC-----WHSDQQVGLTQ---RPSGRI*T* 721
T H+ P SSL+FE L+ YL Q + + W + VG RP R
Sbjct: 348 TLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSR---- 403
Query: 720 *NLLLRETSLFMVGVPYSDHSSFTELQEFVQFLRPEKIIPTVNFGN-VHRGKMQSHFQQW 544
++ + GVPYS+HSSFTEL+EFVQFLRP+KIIPTVN N R KMQS F++W
Sbjct: 404 -------GNITIYGVPYSEHSSFTELREFVQFLRPDKIIPTVNVWNAASREKMQSFFREW 456
Query: 543 L 541
L
Sbjct: 457 L 457
Score = 47.8 bits (112), Expect(2) = 3e-21
Identities = 22/36 (61%), Positives = 26/36 (72%)
Frame = -2
Query: 968 VKIYANASRRCILRSFGWAGISENLSTNGKDAPLHI 861
VKIYANASRR +L+SF W +S NL T G D LH+
Sbjct: 317 VKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHV 352
>ref|XP_006446878.1| hypothetical protein CICLE_v10015161mg [Citrus clementina]
gi|557549489|gb|ESR60118.1| hypothetical protein
CICLE_v10015161mg [Citrus clementina]
Length = 464
Score = 81.6 bits (200), Expect(2) = 3e-21
Identities = 54/121 (44%), Positives = 68/121 (56%), Gaps = 10/121 (8%)
Frame = -1
Query: 873 TFAHI-PKSSLRFEMLQCYLASQDGQDSTLAC-----WHSDQQVGLTQ---RPSGRI*T* 721
T H+ P SSL+FE L+ YL Q + + W + VG RP R
Sbjct: 348 TLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSR---- 403
Query: 720 *NLLLRETSLFMVGVPYSDHSSFTELQEFVQFLRPEKIIPTVNFGN-VHRGKMQSHFQQW 544
++ + GVPYS+HSSFTEL+EFVQFLRP+KIIPTVN N R KMQS F++W
Sbjct: 404 -------GNITIYGVPYSEHSSFTELREFVQFLRPDKIIPTVNVWNAASREKMQSFFREW 456
Query: 543 L 541
L
Sbjct: 457 L 457
Score = 47.8 bits (112), Expect(2) = 3e-21
Identities = 22/36 (61%), Positives = 26/36 (72%)
Frame = -2
Query: 968 VKIYANASRRCILRSFGWAGISENLSTNGKDAPLHI 861
VKIYANASRR +L+SF W +S NL T G D LH+
Sbjct: 317 VKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHV 352
>ref|XP_006598989.1| PREDICTED: DNA cross-link repair protein SNM1-like isoform X3
[Glycine max]
Length = 479
Score = 79.0 bits (193), Expect(2) = 5e-21
Identities = 51/114 (44%), Positives = 64/114 (56%), Gaps = 2/114 (1%)
Frame = -1
Query: 873 TFAHI-PKSSLRFEMLQCYLASQDGQDSTLACWHSDQQVGLTQRPSGRI*T**NLLLRET 697
T H+ P SSLR E L+ YL + Q + + L RP+G
Sbjct: 394 TLLHVLPMSSLRVETLKDYLKTYKEQFTAI----------LAFRPTG------------- 430
Query: 696 SLFMVGVPYSDHSSFTELQEFVQFLRPEKIIPTVNFGN-VHRGKMQSHFQQWLK 538
VPYS+HSSF+ELQ+FVQ LRP+KIIPTVN GN +R KMQS+F+ WLK
Sbjct: 431 ------VPYSEHSSFSELQDFVQVLRPDKIIPTVNVGNAANREKMQSYFRDWLK 478
Score = 49.7 bits (117), Expect(2) = 5e-21
Identities = 22/36 (61%), Positives = 28/36 (77%)
Frame = -2
Query: 968 VKIYANASRRCILRSFGWAGISENLSTNGKDAPLHI 861
VKIYANASRR IL++FGW +S+ L TNG + LH+
Sbjct: 363 VKIYANASRRRILQAFGWPDLSDKLCTNGNNTLLHV 398
>ref|XP_004493109.1| PREDICTED: DNA cross-link repair protein SNM1-like isoform X1
[Cicer arietinum]
Length = 520
Score = 83.6 bits (205), Expect(2) = 9e-20
Identities = 53/122 (43%), Positives = 71/122 (58%), Gaps = 10/122 (8%)
Frame = -1
Query: 873 TFAHI-PKSSLRFEMLQCYLASQDGQDSTLAC-----WHSDQQVGLTQRPSGRI*T**NL 712
T H+ P SSLR E L+ YL + Q +++ W +++G
Sbjct: 409 TLLHVLPMSSLRIETLKEYLKTYKEQFTSVLAFRPTGWTFSEKIGNDLE----------- 457
Query: 711 LLRETS---LFMVGVPYSDHSSFTELQEFVQFLRPEKIIPTVNFGN-VHRGKMQSHFQQW 544
L+R S + GVPYS+HSSFTEL++FVQFLRP+KI+PTVN GN +R KMQS+F W
Sbjct: 458 LIRPVSRGNITTYGVPYSEHSSFTELRDFVQFLRPDKIVPTVNVGNSANREKMQSYFGDW 517
Query: 543 LK 538
LK
Sbjct: 518 LK 519
Score = 40.8 bits (94), Expect(2) = 9e-20
Identities = 20/36 (55%), Positives = 25/36 (69%)
Frame = -2
Query: 968 VKIYANASRRCILRSFGWAGISENLSTNGKDAPLHI 861
VKIYANASRR IL ++G S+ L TNG + LH+
Sbjct: 378 VKIYANASRRRILLAYGSPDYSDRLCTNGNNTLLHV 413
>gb|EEE60929.1| hypothetical protein OsJ_14663 [Oryza sativa Japonica Group]
Length = 517
Score = 81.6 bits (200), Expect(2) = 3e-18
Identities = 50/117 (42%), Positives = 67/117 (57%), Gaps = 9/117 (7%)
Frame = -1
Query: 861 IPKSSLRFEMLQCYLASQDGQDSTLAC-----WHSDQQVGLTQ---RPSGRI*T**NLLL 706
+P SSLR E LQ YL + + + W ++ G +PS R
Sbjct: 374 LPLSSLRHENLQKYLETLKQRFLAVLAFRPTGWTFSEETGNQLDLIKPSSR--------- 424
Query: 705 RETSLFMVGVPYSDHSSFTELQEFVQFLRPEKIIPTVNFGN-VHRGKMQSHFQQWLK 538
+ + GVPYS+HSSF+EL+EFV FLRP+K+IPTVN GN R KMQ+HF++WLK
Sbjct: 425 --GKITIYGVPYSEHSSFSELREFVMFLRPQKVIPTVNVGNAASRDKMQAHFREWLK 479
Score = 37.7 bits (86), Expect(2) = 3e-18
Identities = 15/36 (41%), Positives = 26/36 (72%)
Frame = -2
Query: 968 VKIYANASRRCILRSFGWAGISENLSTNGKDAPLHI 861
V IY +ASRR IL +FGW+ +S+ + ++ + + LH+
Sbjct: 338 VPIYTDASRRRILHAFGWSDLSKMICSDSQSSSLHV 373
>ref|NP_001052690.1| Os04g0401800 [Oryza sativa Japonica Group]
gi|38345210|emb|CAD40784.2| OSJNBb0012E08.8 [Oryza
sativa Japonica Group] gi|113564261|dbj|BAF14604.1|
Os04g0401800 [Oryza sativa Japonica Group]
gi|116309317|emb|CAH66404.1| OSIGBa0155K12.7 [Oryza
sativa Indica Group]
Length = 481
Score = 81.6 bits (200), Expect(2) = 3e-18
Identities = 50/117 (42%), Positives = 67/117 (57%), Gaps = 9/117 (7%)
Frame = -1
Query: 861 IPKSSLRFEMLQCYLASQDGQDSTLAC-----WHSDQQVGLTQ---RPSGRI*T**NLLL 706
+P SSLR E LQ YL + + + W ++ G +PS R
Sbjct: 374 LPLSSLRHENLQKYLETLKQRFLAVLAFRPTGWTFSEETGNQLDLIKPSSR--------- 424
Query: 705 RETSLFMVGVPYSDHSSFTELQEFVQFLRPEKIIPTVNFGN-VHRGKMQSHFQQWLK 538
+ + GVPYS+HSSF+EL+EFV FLRP+K+IPTVN GN R KMQ+HF++WLK
Sbjct: 425 --GKITIYGVPYSEHSSFSELREFVMFLRPQKVIPTVNVGNAASRDKMQAHFREWLK 479
Score = 37.7 bits (86), Expect(2) = 3e-18
Identities = 15/36 (41%), Positives = 26/36 (72%)
Frame = -2
Query: 968 VKIYANASRRCILRSFGWAGISENLSTNGKDAPLHI 861
V IY +ASRR IL +FGW+ +S+ + ++ + + LH+
Sbjct: 338 VPIYTDASRRRILHAFGWSDLSKMICSDSQSSSLHV 373
>ref|XP_003624539.1| DNA cross-link repair protein SNM1 [Medicago truncatula]
gi|87241310|gb|ABD33168.1| DNA repair
metallo-beta-lactamase [Medicago truncatula]
gi|355499554|gb|AES80757.1| DNA cross-link repair
protein SNM1 [Medicago truncatula]
Length = 511
Score = 84.0 bits (206), Expect(2) = 4e-18
Identities = 54/124 (43%), Positives = 72/124 (58%), Gaps = 12/124 (9%)
Frame = -1
Query: 873 TFAHI-PKSSLRFEMLQCYLASQDGQDSTLAC-----WHSDQQVG-----LTQRPSGRI* 727
T H+ P SSLR E L+ YL + Q +++ W +++G + +G I
Sbjct: 400 TLLHVLPMSSLRIETLKEYLKTYKEQFTSVLAFRPTGWTFSEKIGNDLALIKPVSNGNIT 459
Query: 726 T**NLLLRETSLFMVGVPYSDHSSFTELQEFVQFLRPEKIIPTVNFGN-VHRGKMQSHFQ 550
T GVPYS+HSSFTEL++FVQFLRP+KIIPTVN GN +R KMQS+F+
Sbjct: 460 T-------------YGVPYSEHSSFTELRDFVQFLRPDKIIPTVNVGNAANREKMQSYFR 506
Query: 549 QWLK 538
WLK
Sbjct: 507 DWLK 510
Score = 35.0 bits (79), Expect(2) = 4e-18
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = -2
Query: 968 VKIYANASRRCILRSFGWAGISENLSTNGKDAPLHI 861
VKI+ NASRR IL ++ S+ L TNG + LH+
Sbjct: 369 VKIHVNASRRRILLAYDCPDYSDRLCTNGNNTLLHV 404
>ref|XP_004975484.1| PREDICTED: LOW QUALITY PROTEIN: DNA cross-link repair protein
SNM1-like [Setaria italica]
Length = 503
Score = 55.1 bits (131), Expect(3) = 5e-18
Identities = 22/38 (57%), Positives = 32/38 (84%)
Frame = -3
Query: 796 QYTSMLAFRPTGWTYSETIGENLNLIKPTSKRNITIYG 683
++ ++LAFRPTGWT+SE G+ L+LIKP+S ++TIYG
Sbjct: 413 KFVAVLAFRPTGWTFSEATGKQLDLIKPSSNGSVTIYG 450
Score = 52.8 bits (125), Expect(3) = 5e-18
Identities = 25/39 (64%), Positives = 33/39 (84%)
Frame = -1
Query: 696 SLFMVGVPYSDHSSFTELQEFVQFLRPEKIIPTVNFGNV 580
S+ + GVPYS+HSSFTEL++FV FLRP+ +I +VN GNV
Sbjct: 445 SVTIYGVPYSEHSSFTELRDFVMFLRPQ-VIRSVNVGNV 482
Score = 30.4 bits (67), Expect(3) = 5e-18
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = -2
Query: 968 VKIYANASRRCILRSFGWAGISENLSTNGKDAPLHI 861
V IY +ASRR IL SF W +S+ + + + + LH+
Sbjct: 358 VPIYTDASRRRILHSFDWPDLSKRICSCNQSS-LHV 392