BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00005706
         (673 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83525.1| hypothetical protein VITISV_030230 [Vitis vinifera]    93   6e-17
ref|XP_002280511.1| PREDICTED: uncharacterized protein LOC100244...    93   8e-17
ref|XP_004148943.1| PREDICTED: mediator of RNA polymerase II tra...    91   2e-16
gb|EOX93676.1| Mediator of RNA polymerase II transcription subun...    91   3e-16
ref|XP_006384719.1| hypothetical protein POPTR_0004s20480g [Popu...    89   9e-16
gb|EOX96930.1| Mediator of RNA polymerase II transcription subun...    89   9e-16
gb|EOX96929.1| Mediator of RNA polymerase II transcription subun...    89   9e-16
ref|XP_002532456.1| RNA binding protein, putative [Ricinus commu...    89   9e-16
ref|XP_002328215.1| predicted protein [Populus trichocarpa] gi|5...    89   9e-16
ref|XP_003637247.1| hypothetical protein MTR_078s1015 [Medicago ...    89   2e-15
gb|EXB40470.1| hypothetical protein L484_013773 [Morus notabilis]      87   4e-15
ref|XP_003528804.1| PREDICTED: mediator of RNA polymerase II tra...    87   5e-15
ref|XP_002274797.2| PREDICTED: uncharacterized protein LOC100251...    86   8e-15
emb|CBI38298.3| unnamed protein product [Vitis vinifera]               86   8e-15
ref|XP_004510745.1| PREDICTED: mediator of RNA polymerase II tra...    86   1e-14
gb|EMJ00680.1| hypothetical protein PRUPE_ppb009396mg [Prunus pe...    85   2e-14
ref|XP_004246248.1| PREDICTED: mediator of RNA polymerase II tra...    84   4e-14
ref|XP_003548527.1| PREDICTED: mediator of RNA polymerase II tra...    84   5e-14
ref|XP_002312859.2| hypothetical protein POPTR_0009s15800g [Popu...    83   7e-14
gb|EOX96931.1| Mediator of RNA polymerase II transcription subun...    83   7e-14

>emb|CAN83525.1| hypothetical protein VITISV_030230 [Vitis vinifera]
          Length = 316

 Score = 93.2 bits (230), Expect = 6e-17
 Identities = 63/156 (40%), Positives = 85/156 (54%), Gaps = 6/156 (3%)
 Frame = -3

Query: 671 VVGDTEIRKGEGMELNQLSKNSSCVGHRRVHLHPFGLDLLTDAFQLRETTSADLPLADIG 492
           VVG TEIRKGEGMEL+QL  ++  +  R   +HPF LD+L +AFQ+RETT  +L  A+ G
Sbjct: 90  VVGXTEIRKGEGMELDQLFHSTFYLRERNAGIHPFDLDILREAFQMRETTPVELSSAEKG 149

Query: 491 LPSVASNLKNEYXXXXXXXXXXXKDRLRIQDPSSCIDKDRMPSR----DNNKEKNGSKMQ 324
           +P+     KNE            KD+ R    S    KDR   R    D++ +KN  K +
Sbjct: 150 IPTCVPKSKNE-----------PKDKERKHKKSKDKAKDRKKHRHHPKDSSSDKNKDKCR 198

Query: 323 --NYGPDMFLRQQVKKLRTDGNGGFSGIQPYQKKEL 222
             N    +  +QQ KK + DGNG  S IQ + K E+
Sbjct: 199 IGNRDSGIEQKQQDKKRKHDGNGDVSYIQSHLKTEV 234


>ref|XP_002280511.1| PREDICTED: uncharacterized protein LOC100244629 [Vitis vinifera]
           gi|297740784|emb|CBI30966.3| unnamed protein product
           [Vitis vinifera]
          Length = 210

 Score = 92.8 bits (229), Expect = 8e-17
 Identities = 63/155 (40%), Positives = 84/155 (54%), Gaps = 6/155 (3%)
 Frame = -3

Query: 671 VVGDTEIRKGEGMELNQLSKNSSCVGHRRVHLHPFGLDLLTDAFQLRETTSADLPLADIG 492
           VVG TEIRKGEGMEL+QL  ++  +  R   +HPF LD+L +AFQ+RETT  +L  A+ G
Sbjct: 52  VVGGTEIRKGEGMELDQLFHSTFYLRERNAGIHPFDLDILREAFQMRETTPVELSSAEKG 111

Query: 491 LPSVASNLKNEYXXXXXXXXXXXKDRLRIQDPSSCIDKDRMPSR----DNNKEKNGSKMQ 324
           +P+     KNE            KD+ R    S    KDR   R    D++ +KN  K +
Sbjct: 112 IPTCVPKSKNE-----------PKDKERKHKKSKDKAKDRKKHRHHPKDSSSDKNKDKCR 160

Query: 323 --NYGPDMFLRQQVKKLRTDGNGGFSGIQPYQKKE 225
             N    +  +QQ KK + DGNG  S IQ + K E
Sbjct: 161 IGNRDSGIEQKQQDKKRKHDGNGDVSYIQSHLKTE 195


>ref|XP_004148943.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           19a-like [Cucumis sativus]
           gi|449502064|ref|XP_004161533.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 19a-like
           [Cucumis sativus]
          Length = 219

 Score = 91.3 bits (225), Expect = 2e-16
 Identities = 58/153 (37%), Positives = 81/153 (52%), Gaps = 4/153 (2%)
 Frame = -3

Query: 671 VVGDTEIRKGEGMELNQLSKNSSCVGHRRVHLHPFGLDLLTDAFQLRETTSADLPLADIG 492
           VVGDTEIRKGEGM+LNQL +N+S        + PF  D+L +AFQLRET   DLP A+ G
Sbjct: 52  VVGDTEIRKGEGMQLNQLIQNTSYPRETNARIQPFDQDILIEAFQLRETGPVDLPSAEKG 111

Query: 491 LPSVASNLKNEYXXXXXXXXXXXKDRLRIQD----PSSCIDKDRMPSRDNNKEKNGSKMQ 324
           +P++    K+E            KDR + +D          KDR   +D +K+K  S  Q
Sbjct: 112 VPTIPGKSKSE-SKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSGHQ 170

Query: 323 NYGPDMFLRQQVKKLRTDGNGGFSGIQPYQKKE 225
           + G D   +   KK + DG    + I  ++K +
Sbjct: 171 DSGADHSKKHHEKKRKHDGEDDINDIHRHKKSK 203


>gb|EOX93676.1| Mediator of RNA polymerase II transcription subunit 19 [Theobroma
           cacao]
          Length = 221

 Score = 90.9 bits (224), Expect = 3e-16
 Identities = 56/155 (36%), Positives = 85/155 (54%), Gaps = 6/155 (3%)
 Frame = -3

Query: 671 VVGDTEIRKGEGMELNQLSKNSSCVGHRRVHLHPFGLDLLTDAFQLRETTSADLPLADIG 492
           VVGDTEIRKGEGM+L+QL +N+S        + PF LD+L +AFQLRE+T  +LP ++ G
Sbjct: 52  VVGDTEIRKGEGMQLDQLIQNTSHNRDTNARIQPFDLDILKEAFQLRESTPVELPSSEKG 111

Query: 491 LPSVASNLKNEYXXXXXXXXXXXKDRLRIQDPS------SCIDKDRMPSRDNNKEKNGSK 330
           +P++A   K+E            KDR + +D           DKDR   +D  K+K+ S 
Sbjct: 112 IPTIAGKSKSE-AKDKERKHKKHKDRDKEKDKEHKRHKHRHKDKDRTKDKDKEKKKDRSG 170

Query: 329 MQNYGPDMFLRQQVKKLRTDGNGGFSGIQPYQKKE 225
             + G D   +   KK + DG+   + +  ++K +
Sbjct: 171 HHDSGADHSKKHHEKKRKHDGDEDLNDVHRHKKSK 205


>ref|XP_006384719.1| hypothetical protein POPTR_0004s20480g [Populus trichocarpa]
           gi|566167587|ref|XP_006384720.1| hypothetical protein
           POPTR_0004s20480g [Populus trichocarpa]
           gi|550341487|gb|ERP62516.1| hypothetical protein
           POPTR_0004s20480g [Populus trichocarpa]
           gi|550341488|gb|ERP62517.1| hypothetical protein
           POPTR_0004s20480g [Populus trichocarpa]
          Length = 221

 Score = 89.4 bits (220), Expect = 9e-16
 Identities = 56/156 (35%), Positives = 83/156 (53%), Gaps = 7/156 (4%)
 Frame = -3

Query: 671 VVGDTEIRKGEGMELNQLSKNSSCVGHRRVHLHPFGLDLLTDAFQLRETTSADLPLADIG 492
           VVGDTEIRKGEGM+L+QL +N+S       H+ PF LD+L +AFQL+ETT  DLP A+ G
Sbjct: 52  VVGDTEIRKGEGMQLDQLIQNTS--RDSNAHIEPFDLDVLREAFQLKETTPIDLPSAEKG 109

Query: 491 LPSVASNLKNE-------YXXXXXXXXXXXKDRLRIQDPSSCIDKDRMPSRDNNKEKNGS 333
            P++A   K E       +           K++   +      DKDR   +D  K+K+ S
Sbjct: 110 TPTIAGKSKVESKDKDRKHKKHKERDKEKEKEKEHKKRKHRHKDKDRSKDKDKEKKKDRS 169

Query: 332 KMQNYGPDMFLRQQVKKLRTDGNGGFSGIQPYQKKE 225
              + G D   +   KK + DG+   + +  ++K +
Sbjct: 170 GHHDSGADHSKKHHDKKRKHDGDEDLNDVHKHKKSK 205


>gb|EOX96930.1| Mediator of RNA polymerase II transcription subunit 19 isoform 2,
           partial [Theobroma cacao]
          Length = 252

 Score = 89.4 bits (220), Expect = 9e-16
 Identities = 56/146 (38%), Positives = 81/146 (55%)
 Frame = -3

Query: 671 VVGDTEIRKGEGMELNQLSKNSSCVGHRRVHLHPFGLDLLTDAFQLRETTSADLPLADIG 492
           VVGDTEIRKG+GMEL+QL  N+S    R + + PF LDLL +AFQ+RE+   DLPLA+ G
Sbjct: 91  VVGDTEIRKGKGMELDQLFPNASDSRGRNLSIGPFDLDLLGEAFQMRESACVDLPLAEKG 150

Query: 491 LPSVASNLKNEYXXXXXXXXXXXKDRLRIQDPSSCIDKDRMPSRDNNKEKNGSKMQNYGP 312
           +P++ S  K E            KD+ + +D +S   K       +++ KN  +  + GP
Sbjct: 151 IPTMVSKSKAE-SKDKKRKHRKQKDKEKEKDKNSKEHKHHHKDMTSDRNKNKIRHHDSGP 209

Query: 311 DMFLRQQVKKLRTDGNGGFSGIQPYQ 234
           +   + Q KK R   N  F  +  +Q
Sbjct: 210 EDLKKPQDKKRRYAVNDDFLDVHRHQ 235


>gb|EOX96929.1| Mediator of RNA polymerase II transcription subunit 19 isoform 1
           [Theobroma cacao]
          Length = 309

 Score = 89.4 bits (220), Expect = 9e-16
 Identities = 56/146 (38%), Positives = 81/146 (55%)
 Frame = -3

Query: 671 VVGDTEIRKGEGMELNQLSKNSSCVGHRRVHLHPFGLDLLTDAFQLRETTSADLPLADIG 492
           VVGDTEIRKG+GMEL+QL  N+S    R + + PF LDLL +AFQ+RE+   DLPLA+ G
Sbjct: 109 VVGDTEIRKGKGMELDQLFPNASDSRGRNLSIGPFDLDLLGEAFQMRESACVDLPLAEKG 168

Query: 491 LPSVASNLKNEYXXXXXXXXXXXKDRLRIQDPSSCIDKDRMPSRDNNKEKNGSKMQNYGP 312
           +P++ S  K E            KD+ + +D +S   K       +++ KN  +  + GP
Sbjct: 169 IPTMVSKSKAE-SKDKKRKHRKQKDKEKEKDKNSKEHKHHHKDMTSDRNKNKIRHHDSGP 227

Query: 311 DMFLRQQVKKLRTDGNGGFSGIQPYQ 234
           +   + Q KK R   N  F  +  +Q
Sbjct: 228 EDLKKPQDKKRRYAVNDDFLDVHRHQ 253


>ref|XP_002532456.1| RNA binding protein, putative [Ricinus communis]
           gi|223527846|gb|EEF29942.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 221

 Score = 89.4 bits (220), Expect = 9e-16
 Identities = 53/154 (34%), Positives = 83/154 (53%), Gaps = 5/154 (3%)
 Frame = -3

Query: 671 VVGDTEIRKGEGMELNQLSKNSSCVGHRRVHLHPFGLDLLTDAFQLRETTSADLPLADIG 492
           VVGD+EIRKG+GM+L+QL +N+S        + PF LD+L +AFQL+ETT  DLP A+ G
Sbjct: 52  VVGDSEIRKGDGMQLDQLIQNTSYSRDSNARIQPFDLDVLREAFQLKETTPIDLPPAEKG 111

Query: 491 LPSVASNLKN-----EYXXXXXXXXXXXKDRLRIQDPSSCIDKDRMPSRDNNKEKNGSKM 327
            P++A+  K+     E            +D+   +      DKDR   +D  K+K+ S  
Sbjct: 112 TPTIAAKSKSESKDKERKHKKHKDKDKKEDKEHKKHKHRHKDKDRSKDKDKEKKKDRSGH 171

Query: 326 QNYGPDMFLRQQVKKLRTDGNGGFSGIQPYQKKE 225
            + G D   +   KK + DG+   + +  ++K +
Sbjct: 172 HDSGGDHSKKHHDKKRKHDGDEDLNDVHKHKKSK 205


>ref|XP_002328215.1| predicted protein [Populus trichocarpa]
           gi|566167583|ref|XP_006384718.1| hypothetical protein
           POPTR_0004s20480g [Populus trichocarpa]
           gi|550341486|gb|ERP62515.1| hypothetical protein
           POPTR_0004s20480g [Populus trichocarpa]
          Length = 220

 Score = 89.4 bits (220), Expect = 9e-16
 Identities = 56/156 (35%), Positives = 83/156 (53%), Gaps = 7/156 (4%)
 Frame = -3

Query: 671 VVGDTEIRKGEGMELNQLSKNSSCVGHRRVHLHPFGLDLLTDAFQLRETTSADLPLADIG 492
           VVGDTEIRKGEGM+L+QL +N+S       H+ PF LD+L +AFQL+ETT  DLP A+ G
Sbjct: 51  VVGDTEIRKGEGMQLDQLIQNTS--RDSNAHIEPFDLDVLREAFQLKETTPIDLPSAEKG 108

Query: 491 LPSVASNLKNE-------YXXXXXXXXXXXKDRLRIQDPSSCIDKDRMPSRDNNKEKNGS 333
            P++A   K E       +           K++   +      DKDR   +D  K+K+ S
Sbjct: 109 TPTIAGKSKVESKDKDRKHKKHKERDKEKEKEKEHKKRKHRHKDKDRSKDKDKEKKKDRS 168

Query: 332 KMQNYGPDMFLRQQVKKLRTDGNGGFSGIQPYQKKE 225
              + G D   +   KK + DG+   + +  ++K +
Sbjct: 169 GHHDSGADHSKKHHDKKRKHDGDEDLNDVHKHKKSK 204


>ref|XP_003637247.1| hypothetical protein MTR_078s1015 [Medicago truncatula]
           gi|355503182|gb|AES84385.1| hypothetical protein
           MTR_078s1015 [Medicago truncatula]
          Length = 219

 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 49/151 (32%), Positives = 84/151 (55%), Gaps = 2/151 (1%)
 Frame = -3

Query: 671 VVGDTEIRKGEGMELNQLSKNSSCVGHRRVHLHPFGLDLLTDAFQLRETTSADLPLADIG 492
           VVGDTE+RKG+GM+L++L +N+S        + PF LD+L ++FQLRET   DLP A+ G
Sbjct: 58  VVGDTEVRKGDGMQLDELIQNTSFSRETSARIQPFDLDILKESFQLRETAPIDLPAAEKG 117

Query: 491 LPSVASNLKNEYXXXXXXXXXXXKDRLRIQD--PSSCIDKDRMPSRDNNKEKNGSKMQNY 318
           +P++A   K+E            +D+ + ++        KDR   +D +K+K+ S  ++ 
Sbjct: 118 IPTIAGKSKSEKDKEKKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKKKDKSGHRDS 177

Query: 317 GPDMFLRQQVKKLRTDGNGGFSGIQPYQKKE 225
             D   +   KK + DG+   + +  ++K +
Sbjct: 178 SADHSKKHHEKKRKHDGDDDANDVHKHKKSK 208


>gb|EXB40470.1| hypothetical protein L484_013773 [Morus notabilis]
          Length = 219

 Score = 87.4 bits (215), Expect = 4e-15
 Identities = 55/153 (35%), Positives = 84/153 (54%), Gaps = 4/153 (2%)
 Frame = -3

Query: 671 VVGDTEIRKGEGMELNQLSKNSSCVGHRRVHLHPFGLDLLTDAFQLRETTSADLPLADIG 492
           VVGDTEIRKGEGM+L+QL +N+S        + PF LD+L +AFQLRET   DLP A+ G
Sbjct: 52  VVGDTEIRKGEGMQLDQLIQNTSYSRDTNARIQPFDLDILQEAFQLRETGPIDLPPAEKG 111

Query: 491 LPSVASNLKNEYXXXXXXXXXXXKDRLRIQDPS----SCIDKDRMPSRDNNKEKNGSKMQ 324
           + ++A   K+E+           KDR + +D          KDR   +D +K+K+ S   
Sbjct: 112 ILTIAGKSKSEF-KDKERKHKKHKDRDKEKDKEHKKHKHHHKDRSKDKDKDKKKDKSGHH 170

Query: 323 NYGPDMFLRQQVKKLRTDGNGGFSGIQPYQKKE 225
           + G D   +   KK + +G+   + +  ++K +
Sbjct: 171 DSGADHTKKHHEKKRKHEGDEDINDVHRHKKSK 203


>ref|XP_003528804.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           19a-like [Glycine max]
          Length = 223

 Score = 87.0 bits (214), Expect = 5e-15
 Identities = 52/156 (33%), Positives = 81/156 (51%), Gaps = 7/156 (4%)
 Frame = -3

Query: 671 VVGDTEIRKGEGMELNQLSKNSSCVGHRRVHLHPFGLDLLTDAFQLRETTSADLPLADIG 492
           VVGDTEIRKG+GM+L QL +N+S        + PF LD+L +AFQLRET   DLP A+ G
Sbjct: 52  VVGDTEIRKGDGMQLEQLIQNTSSFRDTNARIQPFDLDVLKEAFQLRETAPIDLPAAEKG 111

Query: 491 LPSVASNLKNE-------YXXXXXXXXXXXKDRLRIQDPSSCIDKDRMPSRDNNKEKNGS 333
           +P++A   K E       +           KDR   +      D+ +   +D +K+K+ S
Sbjct: 112 IPTIAGKSKGENKDKEKKHKKHKDKDKDKDKDREHKKHKHRHKDRTKDKDKDRDKKKDKS 171

Query: 332 KMQNYGPDMFLRQQVKKLRTDGNGGFSGIQPYQKKE 225
             ++   D   +   KK + DG+   + +  ++K +
Sbjct: 172 GHRDSSADHSKKHHEKKRKHDGDDDVNDVHKHKKSK 207


>ref|XP_002274797.2| PREDICTED: uncharacterized protein LOC100251197 [Vitis vinifera]
          Length = 194

 Score = 86.3 bits (212), Expect = 8e-15
 Identities = 58/151 (38%), Positives = 84/151 (55%), Gaps = 2/151 (1%)
 Frame = -3

Query: 671 VVGDTEIRKGEGMELNQLSKNSSCVGHRRVHLHPFGLDLLTDAFQLRETTSADLPLADIG 492
           VVGDTEIRKG+GM+L+QL +N+S      V + PF LD+L +AFQLRET   DLP A+ G
Sbjct: 29  VVGDTEIRKGDGMQLDQLIQNTSYSRDTNVRIQPFDLDVLREAFQLRETAPIDLPPAEKG 88

Query: 491 LPSVASNLKNEYXXXXXXXXXXXKDRLRIQDPSSCIDKDR-MPSRDNNKE-KNGSKMQNY 318
           +P++A   K+E            KDR + +D      K R   S++ +KE K+ S   + 
Sbjct: 89  IPTIAGKSKSE-SKDKERKHKKHKDRDKEKDKEHKKHKHRHNRSKEKDKEKKDRSGQHDS 147

Query: 317 GPDMFLRQQVKKLRTDGNGGFSGIQPYQKKE 225
             D   +   KK + DG    + IQ ++K +
Sbjct: 148 AADHSKKHHEKKRKHDGEEDVNDIQRHKKSK 178


>emb|CBI38298.3| unnamed protein product [Vitis vinifera]
          Length = 204

 Score = 86.3 bits (212), Expect = 8e-15
 Identities = 58/151 (38%), Positives = 84/151 (55%), Gaps = 2/151 (1%)
 Frame = -3

Query: 671 VVGDTEIRKGEGMELNQLSKNSSCVGHRRVHLHPFGLDLLTDAFQLRETTSADLPLADIG 492
           VVGDTEIRKG+GM+L+QL +N+S      V + PF LD+L +AFQLRET   DLP A+ G
Sbjct: 39  VVGDTEIRKGDGMQLDQLIQNTSYSRDTNVRIQPFDLDVLREAFQLRETAPIDLPPAEKG 98

Query: 491 LPSVASNLKNEYXXXXXXXXXXXKDRLRIQDPSSCIDKDR-MPSRDNNKE-KNGSKMQNY 318
           +P++A   K+E            KDR + +D      K R   S++ +KE K+ S   + 
Sbjct: 99  IPTIAGKSKSE-SKDKERKHKKHKDRDKEKDKEHKKHKHRHNRSKEKDKEKKDRSGQHDS 157

Query: 317 GPDMFLRQQVKKLRTDGNGGFSGIQPYQKKE 225
             D   +   KK + DG    + IQ ++K +
Sbjct: 158 AADHSKKHHEKKRKHDGEEDVNDIQRHKKSK 188


>ref|XP_004510745.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           19a-like, partial [Cicer arietinum]
          Length = 184

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 45/114 (39%), Positives = 69/114 (60%)
 Frame = -3

Query: 671 VVGDTEIRKGEGMELNQLSKNSSCVGHRRVHLHPFGLDLLTDAFQLRETTSADLPLADIG 492
           VVGDTEIRKG+GM+L+QL +N+S        + PF LD+L +AFQLRETT  DLP A+ G
Sbjct: 52  VVGDTEIRKGDGMQLDQLIQNTSFFRDTSARIQPFDLDILKEAFQLRETTPIDLPAAEKG 111

Query: 491 LPSVASNLKNEYXXXXXXXXXXXKDRLRIQDPSSCIDKDRMPSRDNNKEKNGSK 330
           +P++A   K+E            +D+ + ++      + +  S+D +K+K+  K
Sbjct: 112 IPTIAGKSKSEKDREKKHKKHKDRDKDKDREHKKHKHRHKDRSKDKDKDKDKKK 165


>gb|EMJ00680.1| hypothetical protein PRUPE_ppb009396mg [Prunus persica]
          Length = 217

 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 56/153 (36%), Positives = 82/153 (53%), Gaps = 4/153 (2%)
 Frame = -3

Query: 671 VVGDTEIRKGEGMELNQLSKNSSCVGHRRVHLHPFGLDLLTDAFQLRETTSADLPLADIG 492
           VVGDTEIRKG+GM+L+QL +++S     R+   PF LD+L +AF LRET   DLPLAD G
Sbjct: 52  VVGDTEIRKGDGMQLDQLIQSTSYFSKPRIQ--PFDLDILREAFHLRETAPIDLPLADKG 109

Query: 491 LPSVASNLKNEYXXXXXXXXXXXKDRLRIQDPS----SCIDKDRMPSRDNNKEKNGSKMQ 324
           +P++A+  K+E            KDR + +D          KDR   +D  K+K  S   
Sbjct: 110 IPTIAAKSKSE-SKDKEKKHKKHKDRDKEKDKEHKKHKRRHKDRSKDKDKEKKKEKSGHH 168

Query: 323 NYGPDMFLRQQVKKLRTDGNGGFSGIQPYQKKE 225
               D   +   KK + DG+   + +  ++K +
Sbjct: 169 ESTGDHSKKHHEKKRKHDGDEDLNDVHRHKKSK 201


>ref|XP_004246248.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           19a-like isoform 1 [Solanum lycopersicum]
          Length = 218

 Score = 84.0 bits (206), Expect = 4e-14
 Identities = 52/153 (33%), Positives = 84/153 (54%), Gaps = 4/153 (2%)
 Frame = -3

Query: 671 VVGDTEIRKGEGMELNQLSKNSSCVGHRRVHLHPFGLDLLTDAFQLRETTSADLPLADIG 492
           VVGDTEIRKGEGM+L+QL +++S        + PF LD+L +AF+LRE    DLP ++ G
Sbjct: 52  VVGDTEIRKGEGMQLDQLIQDTSLSRETSSCIQPFDLDVLGEAFRLREAAPVDLPPSEKG 111

Query: 491 LPSVASNLKNEYXXXXXXXXXXXKDRLRIQDPS----SCIDKDRMPSRDNNKEKNGSKMQ 324
           +P+VA   K+E            KD+ + +D          KDR   +D +K+++ S   
Sbjct: 112 IPTVAGKSKSE-SKDKEKKHKKHKDKDKEKDKEHKKHKHRHKDRSKDKDKDKKRDKSVHH 170

Query: 323 NYGPDMFLRQQVKKLRTDGNGGFSGIQPYQKKE 225
           + G D+  +   KK + DG   F+ +  +++ +
Sbjct: 171 DSGADLSKKHHEKKRKHDGEEEFNDVHKHKRSK 203


>ref|XP_003548527.1| PREDICTED: mediator of RNA polymerase II transcription subunit 19a
           isoform X1 [Glycine max]
           gi|571525134|ref|XP_006598920.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 19a isoform X2
           [Glycine max] gi|571525137|ref|XP_006598921.1|
           PREDICTED: mediator of RNA polymerase II transcription
           subunit 19a isoform X3 [Glycine max]
          Length = 222

 Score = 83.6 bits (205), Expect = 5e-14
 Identities = 56/160 (35%), Positives = 84/160 (52%), Gaps = 11/160 (6%)
 Frame = -3

Query: 671 VVGDTEIRKGEGMELNQLSKNSSCVGHRRVHLHPFGLDLLTDAFQLRETTSADLPLADIG 492
           VVGDTEIRKG+GM+L+QL +N+S        + PF LD+L +AFQLRET   DLP A+ G
Sbjct: 52  VVGDTEIRKGDGMQLDQLIQNTS-FRDTNARIQPFDLDVLKEAFQLRETAPIDLPAAEKG 110

Query: 491 LPSVASNLKNE-----------YXXXXXXXXXXXKDRLRIQDPSSCIDKDRMPSRDNNKE 345
           +P++A   K+E                       K + R +D S   DKD+   RD  K+
Sbjct: 111 IPTIAGKSKSENKDKEKKHKKHKDKDKDKDREHKKHKHRHKDRSK--DKDKDKDRDKKKD 168

Query: 344 KNGSKMQNYGPDMFLRQQVKKLRTDGNGGFSGIQPYQKKE 225
           K+G +  +   D   +   KK + DG+   + +  ++K +
Sbjct: 169 KSGHR--DSSADHSKKHHEKKRKHDGDDDVNDVHKHKKSK 206


>ref|XP_002312859.2| hypothetical protein POPTR_0009s15800g [Populus trichocarpa]
           gi|550331827|gb|EEE86814.2| hypothetical protein
           POPTR_0009s15800g [Populus trichocarpa]
          Length = 218

 Score = 83.2 bits (204), Expect = 7e-14
 Identities = 56/155 (36%), Positives = 82/155 (52%), Gaps = 6/155 (3%)
 Frame = -3

Query: 671 VVGDTEIRKGEGMELNQLSKNSSCVGHRRVHLHPFGLDLLTDAFQLRETTSADLPLADIG 492
           VVGDTEIRKGE M+L+QL +N+S        + PF L++L +AFQL+ETT  DLP A+ G
Sbjct: 51  VVGDTEIRKGERMQLDQLIQNTS--RDSNACIQPFDLNVLREAFQLKETTPIDLPSAEKG 108

Query: 491 LPSVASNLKNEYXXXXXXXXXXXKDRLRIQDPS------SCIDKDRMPSRDNNKEKNGSK 330
            P++A   K E            KDR + +D           DKDR   +D  K+K+ S 
Sbjct: 109 TPTIAGKSKGE-SKDKDRKHKKQKDRDKEKDKEHKKHKRRHKDKDRSKDKDKEKKKDRSG 167

Query: 329 MQNYGPDMFLRQQVKKLRTDGNGGFSGIQPYQKKE 225
             + G D   +   KK + DG+   + +  ++K +
Sbjct: 168 HHDSGADHSKKHHEKKRKHDGDEDLNDVHKHKKSK 202


>gb|EOX96931.1| Mediator of RNA polymerase II transcription subunit 19 isoform 3
           [Theobroma cacao]
          Length = 245

 Score = 83.2 bits (204), Expect = 7e-14
 Identities = 51/129 (39%), Positives = 74/129 (57%)
 Frame = -3

Query: 671 VVGDTEIRKGEGMELNQLSKNSSCVGHRRVHLHPFGLDLLTDAFQLRETTSADLPLADIG 492
           VVGDTEIRKG+GMEL+QL  N+S    R + + PF LDLL +AFQ+RE+   DLPLA+ G
Sbjct: 109 VVGDTEIRKGKGMELDQLFPNASDSRGRNLSIGPFDLDLLGEAFQMRESACVDLPLAEKG 168

Query: 491 LPSVASNLKNEYXXXXXXXXXXXKDRLRIQDPSSCIDKDRMPSRDNNKEKNGSKMQNYGP 312
           +P++ S  K E            KD+ + +D +S   K       +++ KN  +  + GP
Sbjct: 169 IPTMVSKSKAE-SKDKKRKHRKQKDKEKEKDKNSKEHKHHHKDMTSDRNKNKIRHHDSGP 227

Query: 311 DMFLRQQVK 285
           +   + Q K
Sbjct: 228 EDLKKPQDK 236