BLASTX nr result

ID: Atropa21_contig00005609 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00005609
         (2061 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006361114.1| PREDICTED: DNA-directed RNA polymerase II su...   227   1e-56
ref|XP_004241362.1| PREDICTED: DNA-directed RNA polymerase II su...   226   2e-56
ref|XP_002307132.1| hypothetical protein POPTR_0005s08690g [Popu...   216   2e-53
ref|XP_002282413.1| PREDICTED: DNA-directed RNA polymerase II su...   216   2e-53
ref|XP_004138390.1| PREDICTED: DNA-directed RNA polymerase II su...   216   3e-53
gb|EOX92292.1| RNA polymerase II, Rpb4, core protein isoform 1 [...   214   9e-53
ref|XP_002522014.1| DNA-directed RNA polymerase II, putative [Ri...   214   9e-53
ref|XP_006579388.1| PREDICTED: uncharacterized protein LOC100527...   214   1e-52
ref|NP_001236224.1| uncharacterized protein LOC100527704 [Glycin...   214   1e-52
gb|EMJ07326.1| hypothetical protein PRUPE_ppa013142mg [Prunus pe...   214   2e-52
ref|XP_006428010.1| hypothetical protein CICLE_v10026735mg [Citr...   213   2e-52
ref|NP_001237937.1| uncharacterized protein LOC100499661 [Glycin...   213   2e-52
gb|ESW06234.1| hypothetical protein PHAVU_010G030200g [Phaseolus...   213   3e-52
gb|AFK35928.1| unknown [Lotus japonicus]                              213   3e-52
ref|XP_006847979.1| hypothetical protein AMTR_s00029p00159420 [A...   212   4e-52
ref|XP_004509486.1| PREDICTED: DNA-directed RNA polymerase II su...   212   6e-52
ref|NP_001238073.1| uncharacterized protein LOC100527316 [Glycin...   211   8e-52
ref|XP_003626907.1| DNA-directed RNA polymerase II subunit RPB4 ...   210   2e-51
ref|XP_004288557.1| PREDICTED: DNA-directed RNA polymerase II su...   209   4e-51
ref|XP_006288864.1| hypothetical protein CARUB_v10002229mg [Caps...   209   5e-51

>ref|XP_006361114.1| PREDICTED: DNA-directed RNA polymerase II subunit 4-like [Solanum
           tuberosum]
          Length = 138

 Score =  227 bits (579), Expect = 1e-56
 Identities = 113/113 (100%), Positives = 113/113 (100%)
 Frame = -3

Query: 340 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPTNQISQVFEKSLQ 161
           MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPTNQISQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPTNQISQVFEKSLQ 60

Query: 160 YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIK 2
           YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIK
Sbjct: 61  YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIK 113


>ref|XP_004241362.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB4-like
           [Solanum lycopersicum]
          Length = 138

 Score =  226 bits (577), Expect = 2e-56
 Identities = 112/113 (99%), Positives = 113/113 (100%)
 Frame = -3

Query: 340 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPTNQISQVFEKSLQ 161
           MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQ+QQMSDDPTNQISQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQIQQMSDDPTNQISQVFEKSLQ 60

Query: 160 YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIK 2
           YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIK
Sbjct: 61  YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIK 113


>ref|XP_002307132.1| hypothetical protein POPTR_0005s08690g [Populus trichocarpa]
           gi|224096326|ref|XP_002310604.1| hypothetical protein
           POPTR_0007s06660g [Populus trichocarpa]
           gi|222853507|gb|EEE91054.1| hypothetical protein
           POPTR_0007s06660g [Populus trichocarpa]
           gi|222856581|gb|EEE94128.1| hypothetical protein
           POPTR_0005s08690g [Populus trichocarpa]
          Length = 138

 Score =  216 bits (551), Expect = 2e-53
 Identities = 107/113 (94%), Positives = 109/113 (96%)
 Frame = -3

Query: 340 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPTNQISQVFEKSLQ 161
           MSGEEEENAAELKIGD+FLKAKCLMNCEVALILEHKYEQLQQMSDDP NQ+SQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIGDDFLKAKCLMNCEVALILEHKYEQLQQMSDDPMNQVSQVFEKSLQ 60

Query: 160 YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIK 2
           YVKRFSRYKNPDAVRQ REILSRY LAEFELCVLGNLCPETVEE IAMVPSIK
Sbjct: 61  YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIK 113


>ref|XP_002282413.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB4 [Vitis
           vinifera] gi|147856183|emb|CAN80281.1| hypothetical
           protein VITISV_017448 [Vitis vinifera]
           gi|302143481|emb|CBI22042.3| unnamed protein product
           [Vitis vinifera]
          Length = 138

 Score =  216 bits (551), Expect = 2e-53
 Identities = 107/113 (94%), Positives = 109/113 (96%)
 Frame = -3

Query: 340 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPTNQISQVFEKSLQ 161
           MSGEEEENAAELKIGDEFLKAKCLMNCEVA+ILEHKYEQLQQMSDDP NQ+SQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIGDEFLKAKCLMNCEVAVILEHKYEQLQQMSDDPLNQVSQVFEKSLQ 60

Query: 160 YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIK 2
           YVKRFSRYKNPDAVRQ REILSRY LAEFELCVLGNLCPETVEE IAMVPSIK
Sbjct: 61  YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIK 113


>ref|XP_004138390.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB4-like
           [Cucumis sativus] gi|449526195|ref|XP_004170099.1|
           PREDICTED: DNA-directed RNA polymerase II subunit
           RPB4-like [Cucumis sativus]
          Length = 138

 Score =  216 bits (550), Expect = 3e-53
 Identities = 105/113 (92%), Positives = 110/113 (97%)
 Frame = -3

Query: 340 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPTNQISQVFEKSLQ 161
           MSGEEEENAAELKIGDEFLKAKCLMNCEV+LILEHKYEQLQQMS+DPTNQ+SQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPTNQVSQVFEKSLQ 60

Query: 160 YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIK 2
           YVKRFSRYKNPDAVRQ RE+LSRY LAEFELCVLGNLCPETVEE IAMVPS+K
Sbjct: 61  YVKRFSRYKNPDAVRQVREVLSRYQLAEFELCVLGNLCPETVEEAIAMVPSLK 113


>gb|EOX92292.1| RNA polymerase II, Rpb4, core protein isoform 1 [Theobroma cacao]
           gi|508700397|gb|EOX92293.1| RNA polymerase II, Rpb4,
           core protein isoform 1 [Theobroma cacao]
          Length = 138

 Score =  214 bits (546), Expect = 9e-53
 Identities = 106/113 (93%), Positives = 109/113 (96%)
 Frame = -3

Query: 340 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPTNQISQVFEKSLQ 161
           MSGEEEENAAELKIG+EFLKAKCLMNCEVALILEHKYEQLQQMS+DP NQ+SQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIGEEFLKAKCLMNCEVALILEHKYEQLQQMSEDPMNQVSQVFEKSLQ 60

Query: 160 YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIK 2
           YVKRFSRYKNPDAVRQ REILSRY LAEFELCVLGNLCPETVEE IAMVPSIK
Sbjct: 61  YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIK 113


>ref|XP_002522014.1| DNA-directed RNA polymerase II, putative [Ricinus communis]
           gi|223538818|gb|EEF40418.1| DNA-directed RNA polymerase
           II, putative [Ricinus communis]
          Length = 138

 Score =  214 bits (546), Expect = 9e-53
 Identities = 106/113 (93%), Positives = 109/113 (96%)
 Frame = -3

Query: 340 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPTNQISQVFEKSLQ 161
           MSGEEEENA+ELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMS+DP NQ+SQVFEKSLQ
Sbjct: 1   MSGEEEENASELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSNDPMNQVSQVFEKSLQ 60

Query: 160 YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIK 2
           YVKRFSRYKNPDAVRQ REILSRY LAEFELCVLGNLCPETVEE IAMVPSIK
Sbjct: 61  YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIK 113


>ref|XP_006579388.1| PREDICTED: uncharacterized protein LOC100527704 isoform X1 [Glycine
           max]
          Length = 138

 Score =  214 bits (545), Expect = 1e-52
 Identities = 106/113 (93%), Positives = 108/113 (95%)
 Frame = -3

Query: 340 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPTNQISQVFEKSLQ 161
           MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQ SDDP NQ+SQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQTSDDPMNQVSQVFEKSLQ 60

Query: 160 YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIK 2
           YVKRFSRYKNPDAVRQ REIL+RY LAEFELCVLGNLCPETVEE IAMVPSIK
Sbjct: 61  YVKRFSRYKNPDAVRQVREILARYELAEFELCVLGNLCPETVEEAIAMVPSIK 113


>ref|NP_001236224.1| uncharacterized protein LOC100527704 [Glycine max]
           gi|255632992|gb|ACU16850.1| unknown [Glycine max]
          Length = 195

 Score =  214 bits (545), Expect = 1e-52
 Identities = 106/113 (93%), Positives = 108/113 (95%)
 Frame = -3

Query: 340 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPTNQISQVFEKSLQ 161
           MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQ SDDP NQ+SQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQTSDDPMNQVSQVFEKSLQ 60

Query: 160 YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIK 2
           YVKRFSRYKNPDAVRQ REIL+RY LAEFELCVLGNLCPETVEE IAMVPSIK
Sbjct: 61  YVKRFSRYKNPDAVRQVREILARYELAEFELCVLGNLCPETVEEAIAMVPSIK 113


>gb|EMJ07326.1| hypothetical protein PRUPE_ppa013142mg [Prunus persica]
          Length = 138

 Score =  214 bits (544), Expect = 2e-52
 Identities = 105/113 (92%), Positives = 108/113 (95%)
 Frame = -3

Query: 340 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPTNQISQVFEKSLQ 161
           MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKY+QLQQMSDDP NQ+SQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYDQLQQMSDDPRNQVSQVFEKSLQ 60

Query: 160 YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIK 2
           YVKRFSRYKNPDAV+Q REILSRY L EFELCVLGNLCPETVEE IAMVPSIK
Sbjct: 61  YVKRFSRYKNPDAVKQVREILSRYQLTEFELCVLGNLCPETVEEAIAMVPSIK 113


>ref|XP_006428010.1| hypothetical protein CICLE_v10026735mg [Citrus clementina]
           gi|568884040|ref|XP_006494738.1| PREDICTED: DNA-directed
           RNA polymerase II subunit 4-like isoform X2 [Citrus
           sinensis] gi|557530000|gb|ESR41250.1| hypothetical
           protein CICLE_v10026735mg [Citrus clementina]
          Length = 138

 Score =  213 bits (543), Expect = 2e-52
 Identities = 105/113 (92%), Positives = 108/113 (95%)
 Frame = -3

Query: 340 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPTNQISQVFEKSLQ 161
           MSGEEEENAAELKIGDEFLKAKCLMNCEVA+IL+HKYEQLQQ SDDP NQ+SQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIGDEFLKAKCLMNCEVAIILDHKYEQLQQTSDDPMNQVSQVFEKSLQ 60

Query: 160 YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIK 2
           YVKRFSRYKNPDAVRQ REILSRY LAEFELCVLGNLCPETVEE IAMVPSIK
Sbjct: 61  YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIK 113


>ref|NP_001237937.1| uncharacterized protein LOC100499661 [Glycine max]
           gi|255625623|gb|ACU13156.1| unknown [Glycine max]
          Length = 138

 Score =  213 bits (543), Expect = 2e-52
 Identities = 106/113 (93%), Positives = 108/113 (95%)
 Frame = -3

Query: 340 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPTNQISQVFEKSLQ 161
           MSGEEEENAAELKIGDEFLKAKCLMNCEV+LILEHKYEQLQQ SDDP NQISQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQTSDDPMNQISQVFEKSLQ 60

Query: 160 YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIK 2
           YVKRFSRYKNPDAVRQ REIL+RY LAEFELCVLGNLCPETVEE IAMVPSIK
Sbjct: 61  YVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMVPSIK 113


>gb|ESW06234.1| hypothetical protein PHAVU_010G030200g [Phaseolus vulgaris]
          Length = 138

 Score =  213 bits (542), Expect = 3e-52
 Identities = 105/113 (92%), Positives = 108/113 (95%)
 Frame = -3

Query: 340 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPTNQISQVFEKSLQ 161
           MSGEEEENAAELKIGDEFLKAKCLMNCEV+LILEHKYEQLQQ SDDP NQ+SQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQTSDDPMNQVSQVFEKSLQ 60

Query: 160 YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIK 2
           YVKRFSRYKNPDAVRQ REIL+RY LAEFELCVLGNLCPETVEE IAMVPSIK
Sbjct: 61  YVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMVPSIK 113


>gb|AFK35928.1| unknown [Lotus japonicus]
          Length = 138

 Score =  213 bits (542), Expect = 3e-52
 Identities = 105/113 (92%), Positives = 108/113 (95%)
 Frame = -3

Query: 340 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPTNQISQVFEKSLQ 161
           MSGEEEENAAELKIGDEFLKAKCLMNCEV+LILEHKYEQLQQ SDDP NQ+SQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQSSDDPMNQVSQVFEKSLQ 60

Query: 160 YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIK 2
           YVKRFSRYKNPDAVRQ REIL+RY LAEFELCVLGNLCPETVEE IAMVPSIK
Sbjct: 61  YVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMVPSIK 113


>ref|XP_006847979.1| hypothetical protein AMTR_s00029p00159420 [Amborella trichopoda]
           gi|548851284|gb|ERN09560.1| hypothetical protein
           AMTR_s00029p00159420 [Amborella trichopoda]
          Length = 139

 Score =  212 bits (540), Expect = 4e-52
 Identities = 105/113 (92%), Positives = 109/113 (96%)
 Frame = -3

Query: 340 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPTNQISQVFEKSLQ 161
           MSGEEEENAAELKIG+EFLKAKCLMNCEVALIL+HKYEQLQQMSDDP+NQISQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIGEEFLKAKCLMNCEVALILDHKYEQLQQMSDDPSNQISQVFEKSLQ 60

Query: 160 YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIK 2
           YVKRFSRYKNPDAVRQ RE+LSR  LAEFELCVLGNLCPETVEE IAMVPSIK
Sbjct: 61  YVKRFSRYKNPDAVRQVREVLSRNQLAEFELCVLGNLCPETVEEAIAMVPSIK 113


>ref|XP_004509486.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB4-like [Cicer
           arietinum] gi|502155876|ref|XP_004510223.1| PREDICTED:
           DNA-directed RNA polymerase II subunit RPB4-like [Cicer
           arietinum]
          Length = 138

 Score =  212 bits (539), Expect = 6e-52
 Identities = 104/113 (92%), Positives = 108/113 (95%)
 Frame = -3

Query: 340 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPTNQISQVFEKSLQ 161
           MSGEEEENAAELKIGDEFLKAKCLMNCEV+LIL+HKYEQLQQ SDDP NQ+SQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILDHKYEQLQQSSDDPMNQVSQVFEKSLQ 60

Query: 160 YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIK 2
           YVKRFSRYKNPDAVRQ REIL+RY LAEFELCVLGNLCPETVEE IAMVPSIK
Sbjct: 61  YVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMVPSIK 113


>ref|NP_001238073.1| uncharacterized protein LOC100527316 [Glycine max]
           gi|255632071|gb|ACU16388.1| unknown [Glycine max]
          Length = 138

 Score =  211 bits (538), Expect = 8e-52
 Identities = 104/113 (92%), Positives = 108/113 (95%)
 Frame = -3

Query: 340 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPTNQISQVFEKSLQ 161
           MSGEEEENAAELKIGDEFLKAKCLMNCEV+LILEHKYEQLQQ SDDP NQ+SQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQTSDDPMNQVSQVFEKSLQ 60

Query: 160 YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIK 2
           YVKRFSRYKNPDAVRQ REIL+RY LAEFELCVLGNLCPETVEE IA+VPSIK
Sbjct: 61  YVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAVVPSIK 113


>ref|XP_003626907.1| DNA-directed RNA polymerase II subunit RPB4 [Medicago truncatula]
           gi|355520929|gb|AET01383.1| DNA-directed RNA polymerase
           II subunit RPB4 [Medicago truncatula]
           gi|388497296|gb|AFK36714.1| unknown [Medicago
           truncatula]
          Length = 138

 Score =  210 bits (534), Expect = 2e-51
 Identities = 104/113 (92%), Positives = 107/113 (94%)
 Frame = -3

Query: 340 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPTNQISQVFEKSLQ 161
           MSGEEEENAAELKIGDEFLKAKCLMNCEV+LILEHKYEQLQQ SDD  NQ+SQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQSSDDAMNQVSQVFEKSLQ 60

Query: 160 YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIK 2
           YVKRFSRYKNPDAVRQ REIL+RY LAEFELCVLGNLCPETVEE IAMVPSIK
Sbjct: 61  YVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMVPSIK 113


>ref|XP_004288557.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB4-like
           [Fragaria vesca subsp. vesca]
          Length = 138

 Score =  209 bits (532), Expect = 4e-51
 Identities = 103/113 (91%), Positives = 107/113 (94%)
 Frame = -3

Query: 340 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPTNQISQVFEKSLQ 161
           MSGEEEENAAELKIGDEFLKAKCLMNCEV+LILEHK+EQLQQMSDDP NQ+SQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKFEQLQQMSDDPRNQVSQVFEKSLQ 60

Query: 160 YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIK 2
           YVKRFSRYKN DAV+Q REILSRY L EFELCVLGNLCPETVEE IAMVPSIK
Sbjct: 61  YVKRFSRYKNADAVKQVREILSRYQLTEFELCVLGNLCPETVEEAIAMVPSIK 113


>ref|XP_006288864.1| hypothetical protein CARUB_v10002229mg [Capsella rubella]
           gi|482557570|gb|EOA21762.1| hypothetical protein
           CARUB_v10002229mg [Capsella rubella]
          Length = 138

 Score =  209 bits (531), Expect = 5e-51
 Identities = 101/113 (89%), Positives = 108/113 (95%)
 Frame = -3

Query: 340 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPTNQISQVFEKSLQ 161
           MSGEEEENAAELKIGDEFLKAKCLMNCEV+LILEHKYEQLQQ+S+DP NQ+SQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQVSEDPMNQVSQVFEKSLQ 60

Query: 160 YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIK 2
           YVKRFSRYKNPDAVRQ REILSR+ L EFELCVLGNLCPETVEE +AMVPS+K
Sbjct: 61  YVKRFSRYKNPDAVRQVREILSRHQLTEFELCVLGNLCPETVEEAVAMVPSLK 113


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