BLASTX nr result
ID: Atropa21_contig00005609
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00005609
(2061 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006361114.1| PREDICTED: DNA-directed RNA polymerase II su... 227 1e-56
ref|XP_004241362.1| PREDICTED: DNA-directed RNA polymerase II su... 226 2e-56
ref|XP_002307132.1| hypothetical protein POPTR_0005s08690g [Popu... 216 2e-53
ref|XP_002282413.1| PREDICTED: DNA-directed RNA polymerase II su... 216 2e-53
ref|XP_004138390.1| PREDICTED: DNA-directed RNA polymerase II su... 216 3e-53
gb|EOX92292.1| RNA polymerase II, Rpb4, core protein isoform 1 [... 214 9e-53
ref|XP_002522014.1| DNA-directed RNA polymerase II, putative [Ri... 214 9e-53
ref|XP_006579388.1| PREDICTED: uncharacterized protein LOC100527... 214 1e-52
ref|NP_001236224.1| uncharacterized protein LOC100527704 [Glycin... 214 1e-52
gb|EMJ07326.1| hypothetical protein PRUPE_ppa013142mg [Prunus pe... 214 2e-52
ref|XP_006428010.1| hypothetical protein CICLE_v10026735mg [Citr... 213 2e-52
ref|NP_001237937.1| uncharacterized protein LOC100499661 [Glycin... 213 2e-52
gb|ESW06234.1| hypothetical protein PHAVU_010G030200g [Phaseolus... 213 3e-52
gb|AFK35928.1| unknown [Lotus japonicus] 213 3e-52
ref|XP_006847979.1| hypothetical protein AMTR_s00029p00159420 [A... 212 4e-52
ref|XP_004509486.1| PREDICTED: DNA-directed RNA polymerase II su... 212 6e-52
ref|NP_001238073.1| uncharacterized protein LOC100527316 [Glycin... 211 8e-52
ref|XP_003626907.1| DNA-directed RNA polymerase II subunit RPB4 ... 210 2e-51
ref|XP_004288557.1| PREDICTED: DNA-directed RNA polymerase II su... 209 4e-51
ref|XP_006288864.1| hypothetical protein CARUB_v10002229mg [Caps... 209 5e-51
>ref|XP_006361114.1| PREDICTED: DNA-directed RNA polymerase II subunit 4-like [Solanum
tuberosum]
Length = 138
Score = 227 bits (579), Expect = 1e-56
Identities = 113/113 (100%), Positives = 113/113 (100%)
Frame = -3
Query: 340 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPTNQISQVFEKSLQ 161
MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPTNQISQVFEKSLQ
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPTNQISQVFEKSLQ 60
Query: 160 YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIK 2
YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIK
Sbjct: 61 YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIK 113
>ref|XP_004241362.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB4-like
[Solanum lycopersicum]
Length = 138
Score = 226 bits (577), Expect = 2e-56
Identities = 112/113 (99%), Positives = 113/113 (100%)
Frame = -3
Query: 340 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPTNQISQVFEKSLQ 161
MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQ+QQMSDDPTNQISQVFEKSLQ
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQIQQMSDDPTNQISQVFEKSLQ 60
Query: 160 YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIK 2
YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIK
Sbjct: 61 YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIK 113
>ref|XP_002307132.1| hypothetical protein POPTR_0005s08690g [Populus trichocarpa]
gi|224096326|ref|XP_002310604.1| hypothetical protein
POPTR_0007s06660g [Populus trichocarpa]
gi|222853507|gb|EEE91054.1| hypothetical protein
POPTR_0007s06660g [Populus trichocarpa]
gi|222856581|gb|EEE94128.1| hypothetical protein
POPTR_0005s08690g [Populus trichocarpa]
Length = 138
Score = 216 bits (551), Expect = 2e-53
Identities = 107/113 (94%), Positives = 109/113 (96%)
Frame = -3
Query: 340 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPTNQISQVFEKSLQ 161
MSGEEEENAAELKIGD+FLKAKCLMNCEVALILEHKYEQLQQMSDDP NQ+SQVFEKSLQ
Sbjct: 1 MSGEEEENAAELKIGDDFLKAKCLMNCEVALILEHKYEQLQQMSDDPMNQVSQVFEKSLQ 60
Query: 160 YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIK 2
YVKRFSRYKNPDAVRQ REILSRY LAEFELCVLGNLCPETVEE IAMVPSIK
Sbjct: 61 YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIK 113
>ref|XP_002282413.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB4 [Vitis
vinifera] gi|147856183|emb|CAN80281.1| hypothetical
protein VITISV_017448 [Vitis vinifera]
gi|302143481|emb|CBI22042.3| unnamed protein product
[Vitis vinifera]
Length = 138
Score = 216 bits (551), Expect = 2e-53
Identities = 107/113 (94%), Positives = 109/113 (96%)
Frame = -3
Query: 340 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPTNQISQVFEKSLQ 161
MSGEEEENAAELKIGDEFLKAKCLMNCEVA+ILEHKYEQLQQMSDDP NQ+SQVFEKSLQ
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVAVILEHKYEQLQQMSDDPLNQVSQVFEKSLQ 60
Query: 160 YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIK 2
YVKRFSRYKNPDAVRQ REILSRY LAEFELCVLGNLCPETVEE IAMVPSIK
Sbjct: 61 YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIK 113
>ref|XP_004138390.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB4-like
[Cucumis sativus] gi|449526195|ref|XP_004170099.1|
PREDICTED: DNA-directed RNA polymerase II subunit
RPB4-like [Cucumis sativus]
Length = 138
Score = 216 bits (550), Expect = 3e-53
Identities = 105/113 (92%), Positives = 110/113 (97%)
Frame = -3
Query: 340 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPTNQISQVFEKSLQ 161
MSGEEEENAAELKIGDEFLKAKCLMNCEV+LILEHKYEQLQQMS+DPTNQ+SQVFEKSLQ
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPTNQVSQVFEKSLQ 60
Query: 160 YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIK 2
YVKRFSRYKNPDAVRQ RE+LSRY LAEFELCVLGNLCPETVEE IAMVPS+K
Sbjct: 61 YVKRFSRYKNPDAVRQVREVLSRYQLAEFELCVLGNLCPETVEEAIAMVPSLK 113
>gb|EOX92292.1| RNA polymerase II, Rpb4, core protein isoform 1 [Theobroma cacao]
gi|508700397|gb|EOX92293.1| RNA polymerase II, Rpb4,
core protein isoform 1 [Theobroma cacao]
Length = 138
Score = 214 bits (546), Expect = 9e-53
Identities = 106/113 (93%), Positives = 109/113 (96%)
Frame = -3
Query: 340 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPTNQISQVFEKSLQ 161
MSGEEEENAAELKIG+EFLKAKCLMNCEVALILEHKYEQLQQMS+DP NQ+SQVFEKSLQ
Sbjct: 1 MSGEEEENAAELKIGEEFLKAKCLMNCEVALILEHKYEQLQQMSEDPMNQVSQVFEKSLQ 60
Query: 160 YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIK 2
YVKRFSRYKNPDAVRQ REILSRY LAEFELCVLGNLCPETVEE IAMVPSIK
Sbjct: 61 YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIK 113
>ref|XP_002522014.1| DNA-directed RNA polymerase II, putative [Ricinus communis]
gi|223538818|gb|EEF40418.1| DNA-directed RNA polymerase
II, putative [Ricinus communis]
Length = 138
Score = 214 bits (546), Expect = 9e-53
Identities = 106/113 (93%), Positives = 109/113 (96%)
Frame = -3
Query: 340 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPTNQISQVFEKSLQ 161
MSGEEEENA+ELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMS+DP NQ+SQVFEKSLQ
Sbjct: 1 MSGEEEENASELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSNDPMNQVSQVFEKSLQ 60
Query: 160 YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIK 2
YVKRFSRYKNPDAVRQ REILSRY LAEFELCVLGNLCPETVEE IAMVPSIK
Sbjct: 61 YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIK 113
>ref|XP_006579388.1| PREDICTED: uncharacterized protein LOC100527704 isoform X1 [Glycine
max]
Length = 138
Score = 214 bits (545), Expect = 1e-52
Identities = 106/113 (93%), Positives = 108/113 (95%)
Frame = -3
Query: 340 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPTNQISQVFEKSLQ 161
MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQ SDDP NQ+SQVFEKSLQ
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQTSDDPMNQVSQVFEKSLQ 60
Query: 160 YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIK 2
YVKRFSRYKNPDAVRQ REIL+RY LAEFELCVLGNLCPETVEE IAMVPSIK
Sbjct: 61 YVKRFSRYKNPDAVRQVREILARYELAEFELCVLGNLCPETVEEAIAMVPSIK 113
>ref|NP_001236224.1| uncharacterized protein LOC100527704 [Glycine max]
gi|255632992|gb|ACU16850.1| unknown [Glycine max]
Length = 195
Score = 214 bits (545), Expect = 1e-52
Identities = 106/113 (93%), Positives = 108/113 (95%)
Frame = -3
Query: 340 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPTNQISQVFEKSLQ 161
MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQ SDDP NQ+SQVFEKSLQ
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQTSDDPMNQVSQVFEKSLQ 60
Query: 160 YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIK 2
YVKRFSRYKNPDAVRQ REIL+RY LAEFELCVLGNLCPETVEE IAMVPSIK
Sbjct: 61 YVKRFSRYKNPDAVRQVREILARYELAEFELCVLGNLCPETVEEAIAMVPSIK 113
>gb|EMJ07326.1| hypothetical protein PRUPE_ppa013142mg [Prunus persica]
Length = 138
Score = 214 bits (544), Expect = 2e-52
Identities = 105/113 (92%), Positives = 108/113 (95%)
Frame = -3
Query: 340 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPTNQISQVFEKSLQ 161
MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKY+QLQQMSDDP NQ+SQVFEKSLQ
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYDQLQQMSDDPRNQVSQVFEKSLQ 60
Query: 160 YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIK 2
YVKRFSRYKNPDAV+Q REILSRY L EFELCVLGNLCPETVEE IAMVPSIK
Sbjct: 61 YVKRFSRYKNPDAVKQVREILSRYQLTEFELCVLGNLCPETVEEAIAMVPSIK 113
>ref|XP_006428010.1| hypothetical protein CICLE_v10026735mg [Citrus clementina]
gi|568884040|ref|XP_006494738.1| PREDICTED: DNA-directed
RNA polymerase II subunit 4-like isoform X2 [Citrus
sinensis] gi|557530000|gb|ESR41250.1| hypothetical
protein CICLE_v10026735mg [Citrus clementina]
Length = 138
Score = 213 bits (543), Expect = 2e-52
Identities = 105/113 (92%), Positives = 108/113 (95%)
Frame = -3
Query: 340 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPTNQISQVFEKSLQ 161
MSGEEEENAAELKIGDEFLKAKCLMNCEVA+IL+HKYEQLQQ SDDP NQ+SQVFEKSLQ
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVAIILDHKYEQLQQTSDDPMNQVSQVFEKSLQ 60
Query: 160 YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIK 2
YVKRFSRYKNPDAVRQ REILSRY LAEFELCVLGNLCPETVEE IAMVPSIK
Sbjct: 61 YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIK 113
>ref|NP_001237937.1| uncharacterized protein LOC100499661 [Glycine max]
gi|255625623|gb|ACU13156.1| unknown [Glycine max]
Length = 138
Score = 213 bits (543), Expect = 2e-52
Identities = 106/113 (93%), Positives = 108/113 (95%)
Frame = -3
Query: 340 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPTNQISQVFEKSLQ 161
MSGEEEENAAELKIGDEFLKAKCLMNCEV+LILEHKYEQLQQ SDDP NQISQVFEKSLQ
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQTSDDPMNQISQVFEKSLQ 60
Query: 160 YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIK 2
YVKRFSRYKNPDAVRQ REIL+RY LAEFELCVLGNLCPETVEE IAMVPSIK
Sbjct: 61 YVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMVPSIK 113
>gb|ESW06234.1| hypothetical protein PHAVU_010G030200g [Phaseolus vulgaris]
Length = 138
Score = 213 bits (542), Expect = 3e-52
Identities = 105/113 (92%), Positives = 108/113 (95%)
Frame = -3
Query: 340 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPTNQISQVFEKSLQ 161
MSGEEEENAAELKIGDEFLKAKCLMNCEV+LILEHKYEQLQQ SDDP NQ+SQVFEKSLQ
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQTSDDPMNQVSQVFEKSLQ 60
Query: 160 YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIK 2
YVKRFSRYKNPDAVRQ REIL+RY LAEFELCVLGNLCPETVEE IAMVPSIK
Sbjct: 61 YVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMVPSIK 113
>gb|AFK35928.1| unknown [Lotus japonicus]
Length = 138
Score = 213 bits (542), Expect = 3e-52
Identities = 105/113 (92%), Positives = 108/113 (95%)
Frame = -3
Query: 340 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPTNQISQVFEKSLQ 161
MSGEEEENAAELKIGDEFLKAKCLMNCEV+LILEHKYEQLQQ SDDP NQ+SQVFEKSLQ
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQSSDDPMNQVSQVFEKSLQ 60
Query: 160 YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIK 2
YVKRFSRYKNPDAVRQ REIL+RY LAEFELCVLGNLCPETVEE IAMVPSIK
Sbjct: 61 YVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMVPSIK 113
>ref|XP_006847979.1| hypothetical protein AMTR_s00029p00159420 [Amborella trichopoda]
gi|548851284|gb|ERN09560.1| hypothetical protein
AMTR_s00029p00159420 [Amborella trichopoda]
Length = 139
Score = 212 bits (540), Expect = 4e-52
Identities = 105/113 (92%), Positives = 109/113 (96%)
Frame = -3
Query: 340 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPTNQISQVFEKSLQ 161
MSGEEEENAAELKIG+EFLKAKCLMNCEVALIL+HKYEQLQQMSDDP+NQISQVFEKSLQ
Sbjct: 1 MSGEEEENAAELKIGEEFLKAKCLMNCEVALILDHKYEQLQQMSDDPSNQISQVFEKSLQ 60
Query: 160 YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIK 2
YVKRFSRYKNPDAVRQ RE+LSR LAEFELCVLGNLCPETVEE IAMVPSIK
Sbjct: 61 YVKRFSRYKNPDAVRQVREVLSRNQLAEFELCVLGNLCPETVEEAIAMVPSIK 113
>ref|XP_004509486.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB4-like [Cicer
arietinum] gi|502155876|ref|XP_004510223.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB4-like [Cicer
arietinum]
Length = 138
Score = 212 bits (539), Expect = 6e-52
Identities = 104/113 (92%), Positives = 108/113 (95%)
Frame = -3
Query: 340 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPTNQISQVFEKSLQ 161
MSGEEEENAAELKIGDEFLKAKCLMNCEV+LIL+HKYEQLQQ SDDP NQ+SQVFEKSLQ
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILDHKYEQLQQSSDDPMNQVSQVFEKSLQ 60
Query: 160 YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIK 2
YVKRFSRYKNPDAVRQ REIL+RY LAEFELCVLGNLCPETVEE IAMVPSIK
Sbjct: 61 YVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMVPSIK 113
>ref|NP_001238073.1| uncharacterized protein LOC100527316 [Glycine max]
gi|255632071|gb|ACU16388.1| unknown [Glycine max]
Length = 138
Score = 211 bits (538), Expect = 8e-52
Identities = 104/113 (92%), Positives = 108/113 (95%)
Frame = -3
Query: 340 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPTNQISQVFEKSLQ 161
MSGEEEENAAELKIGDEFLKAKCLMNCEV+LILEHKYEQLQQ SDDP NQ+SQVFEKSLQ
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQTSDDPMNQVSQVFEKSLQ 60
Query: 160 YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIK 2
YVKRFSRYKNPDAVRQ REIL+RY LAEFELCVLGNLCPETVEE IA+VPSIK
Sbjct: 61 YVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAVVPSIK 113
>ref|XP_003626907.1| DNA-directed RNA polymerase II subunit RPB4 [Medicago truncatula]
gi|355520929|gb|AET01383.1| DNA-directed RNA polymerase
II subunit RPB4 [Medicago truncatula]
gi|388497296|gb|AFK36714.1| unknown [Medicago
truncatula]
Length = 138
Score = 210 bits (534), Expect = 2e-51
Identities = 104/113 (92%), Positives = 107/113 (94%)
Frame = -3
Query: 340 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPTNQISQVFEKSLQ 161
MSGEEEENAAELKIGDEFLKAKCLMNCEV+LILEHKYEQLQQ SDD NQ+SQVFEKSLQ
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQSSDDAMNQVSQVFEKSLQ 60
Query: 160 YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIK 2
YVKRFSRYKNPDAVRQ REIL+RY LAEFELCVLGNLCPETVEE IAMVPSIK
Sbjct: 61 YVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMVPSIK 113
>ref|XP_004288557.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB4-like
[Fragaria vesca subsp. vesca]
Length = 138
Score = 209 bits (532), Expect = 4e-51
Identities = 103/113 (91%), Positives = 107/113 (94%)
Frame = -3
Query: 340 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPTNQISQVFEKSLQ 161
MSGEEEENAAELKIGDEFLKAKCLMNCEV+LILEHK+EQLQQMSDDP NQ+SQVFEKSLQ
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKFEQLQQMSDDPRNQVSQVFEKSLQ 60
Query: 160 YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIK 2
YVKRFSRYKN DAV+Q REILSRY L EFELCVLGNLCPETVEE IAMVPSIK
Sbjct: 61 YVKRFSRYKNADAVKQVREILSRYQLTEFELCVLGNLCPETVEEAIAMVPSIK 113
>ref|XP_006288864.1| hypothetical protein CARUB_v10002229mg [Capsella rubella]
gi|482557570|gb|EOA21762.1| hypothetical protein
CARUB_v10002229mg [Capsella rubella]
Length = 138
Score = 209 bits (531), Expect = 5e-51
Identities = 101/113 (89%), Positives = 108/113 (95%)
Frame = -3
Query: 340 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPTNQISQVFEKSLQ 161
MSGEEEENAAELKIGDEFLKAKCLMNCEV+LILEHKYEQLQQ+S+DP NQ+SQVFEKSLQ
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQVSEDPMNQVSQVFEKSLQ 60
Query: 160 YVKRFSRYKNPDAVRQAREILSRYPLAEFELCVLGNLCPETVEEGIAMVPSIK 2
YVKRFSRYKNPDAVRQ REILSR+ L EFELCVLGNLCPETVEE +AMVPS+K
Sbjct: 61 YVKRFSRYKNPDAVRQVREILSRHQLTEFELCVLGNLCPETVEEAVAMVPSLK 113