BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00005598
         (890 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002720152.1| PREDICTED: ribosomal protein S4, X-linked X-...   164   5e-73
ref|XP_005641046.1| PREDICTED: 40S ribosomal protein S4, X isofo...   164   5e-68
gb|ELV11206.1| 40S ribosomal protein S4 [Tupaia chinensis]            153   4e-65
gb|ENN72705.1| hypothetical protein YQE_10643, partial [Dendroct...   161   6e-64
gb|ERL92835.1| hypothetical protein D910_10143 [Dendroctonus pon...   161   6e-63
gb|ELW61824.1| 40S ribosomal protein S4 [Tupaia chinensis]            151   2e-61
ref|XP_001913602.1| 40S ribosomal protein S4 [Entamoeba histolyt...   153   6e-60
gb|ERL92836.1| hypothetical protein D910_10143 [Dendroctonus pon...   161   6e-60
gb|ELK23579.1| 40S ribosomal protein S4 [Myotis davidii]              135   4e-59
ref|XP_006352980.1| PREDICTED: 40S ribosomal protein S4-like [So...   209   8e-52
ref|XP_006352979.1| PREDICTED: 40S ribosomal protein S4-like [So...   209   8e-52
ref|XP_004233134.1| PREDICTED: 40S ribosomal protein S4-like iso...   209   8e-52
ref|XP_004233133.1| PREDICTED: 40S ribosomal protein S4-like [So...   209   8e-52
ref|NP_001275148.1| 40S ribosomal protein S4 [Solanum tuberosum]...   209   1e-51
ref|XP_006344073.1| PREDICTED: 40S ribosomal protein S4-like [So...   209   1e-51
ref|XP_004240421.1| PREDICTED: 40S ribosomal protein S4-like [So...   209   1e-51
ref|NP_001275093.1| 40S ribosomal protein S4-like [Solanum tuber...   209   1e-51
gb|ELK17202.1| 40S ribosomal protein S4 [Pteropus alecto]             134   8e-51
ref|XP_002323021.2| hypothetical protein POPTR_0016s13210g [Popu...   206   9e-51
ref|XP_003611879.1| 40S ribosomal protein S4 [Medicago truncatul...   206   9e-51

>ref|XP_002720152.1| PREDICTED: ribosomal protein S4, X-linked X-like isoform 1
           [Oryctolagus cuniculus]
          Length = 255

 Score =  164 bits (414), Expect(2) = 5e-73
 Identities = 79/103 (76%), Positives = 87/103 (84%)
 Frame = +2

Query: 2   RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIIILRNRLKYALTYREVI 181
           RG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLII LRNRLKYALT  EV 
Sbjct: 3   RGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVK 62

Query: 182 SILMQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNESFRLLYDT 310
            I MQR + +DGKVRTD TYPAGFMDV+SI KT E+FRL+YDT
Sbjct: 63  KICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDT 105



 Score =  138 bits (348), Expect(2) = 5e-73
 Identities = 64/116 (55%), Positives = 83/116 (71%)
 Frame = +1

Query: 355 IRYPDPLIKANDTIKLDLDSNKIVDFIKFDXXXXXXXXXXXXXXXXXXLKNREKHKGSFE 534
           IRYPDPLIK NDTI++DL++ KI DFIKFD                  + NRE+H GSF+
Sbjct: 139 IRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFD 198

Query: 535 TVHIQDALGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLAAQSAT 702
            VH++DA G+ FATRL N+F +GKG KPW+SLP+GKGI+L+I EE  KRLAA+ ++
Sbjct: 199 VVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 254


>ref|XP_005641046.1| PREDICTED: 40S ribosomal protein S4, X isoform isoform X1 [Canis
           lupus familiaris]
          Length = 228

 Score =  164 bits (414), Expect(2) = 5e-68
 Identities = 79/103 (76%), Positives = 87/103 (84%)
 Frame = +2

Query: 2   RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIIILRNRLKYALTYREVI 181
           RG KKHLKR+ APKHWMLDKL G FAP+PS+GPHK RECLPLII LRNRLKYALT  EV 
Sbjct: 3   RGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVK 62

Query: 182 SILMQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNESFRLLYDT 310
            I MQR + +DGKVRTD TYPAGFMDV+SI KT E+FRL+YDT
Sbjct: 63  KICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDT 105



 Score =  121 bits (304), Expect(2) = 5e-68
 Identities = 56/108 (51%), Positives = 75/108 (69%)
 Frame = +1

Query: 379 KANDTIKLDLDSNKIVDFIKFDXXXXXXXXXXXXXXXXXXLKNREKHKGSFETVHIQDAL 558
           K NDTI++DL++ KI DFIKFD                  + NRE+H GSF+ VH++DA 
Sbjct: 120 KVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDAN 179

Query: 559 GHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLAAQSAT 702
           G+ FATRL N+F +GKG KPW+SLP+GKGI+L+I EE  KRLAA+ ++
Sbjct: 180 GNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 227


>gb|ELV11206.1| 40S ribosomal protein S4 [Tupaia chinensis]
          Length = 258

 Score =  153 bits (386), Expect(2) = 4e-65
 Identities = 75/102 (73%), Positives = 83/102 (81%)
 Frame = +2

Query: 5   GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIIILRNRLKYALTYREVIS 184
           G KKHLKR+ APKHWML KL G FAP+PS+GPHK RECL LII LRNRLKYALT  EV  
Sbjct: 4   GPKKHLKRVAAPKHWMLGKLTGVFAPRPSTGPHKLRECLSLIIFLRNRLKYALTGDEVKK 63

Query: 185 ILMQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNESFRLLYDT 310
           I MQ  + +DGKVRTD TYPAGFMDV+SI KT E+FRL+YDT
Sbjct: 64  ICMQWFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDT 105



 Score =  122 bits (307), Expect(2) = 4e-65
 Identities = 58/105 (55%), Positives = 72/105 (68%)
 Frame = +1

Query: 355 IRYPDPLIKANDTIKLDLDSNKIVDFIKFDXXXXXXXXXXXXXXXXXXLKNREKHKGSFE 534
           IRYPDPLIK NDTI++ L + KI DFIKFD                  + NRE+H GSF+
Sbjct: 146 IRYPDPLIKVNDTIQIYLKTGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFD 205

Query: 535 TVHIQDALGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEE 669
            VH++DA G+ FATRL N+F +GKG KPW+SLP GKGI+L+I EE
Sbjct: 206 VVHMKDANGNSFATRLSNIFVIGKGNKPWISLPWGKGIRLTIAEE 250


>gb|ENN72705.1| hypothetical protein YQE_10643, partial [Dendroctonus ponderosae]
          Length = 226

 Score =  161 bits (407), Expect(2) = 6e-64
 Identities = 78/102 (76%), Positives = 85/102 (83%)
 Frame = +2

Query: 2   RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIIILRNRLKYALTYREVI 181
           RG KKHLKRLNAPK WMLDKLGG FAP+PS+GPHK RE LPL+I LRNRLKYALT  EV 
Sbjct: 3   RGPKKHLKRLNAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNSEVT 62

Query: 182 SILMQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNESFRLLYD 307
            I+MQR + VDGKVRTD  YPAGFMDVV+I KT E FRL+YD
Sbjct: 63  KIVMQRLIKVDGKVRTDPNYPAGFMDVVTIEKTGEFFRLIYD 104



 Score =  110 bits (276), Expect(2) = 6e-64
 Identities = 55/106 (51%), Positives = 74/106 (69%)
 Frame = +1

Query: 379 KANDTIKLDLDSNKIVDFIKFDXXXXXXXXXXXXXXXXXXLKNREKHKGSFETVHIQDAL 558
           K NDTI+LD+ ++KI+D+IKF+                  + NRE+H GSF+ VHI+DA 
Sbjct: 120 KVNDTIQLDIATSKILDYIKFESGNLCQITGGRNLGRVGTVVNRERHPGSFDIVHIKDAN 179

Query: 559 GHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLAAQS 696
            H FATRL NVF +GKG+K +VSLP+GKG+KLSI EE  KRLA+++
Sbjct: 180 DHVFATRLNNVFIIGKGSKAFVSLPRGKGVKLSIAEERDKRLASKT 225


>gb|ERL92835.1| hypothetical protein D910_10143 [Dendroctonus ponderosae]
          Length = 250

 Score =  161 bits (407), Expect(2) = 6e-63
 Identities = 78/102 (76%), Positives = 85/102 (83%)
 Frame = +2

Query: 2   RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIIILRNRLKYALTYREVI 181
           RG KKHLKRLNAPK WMLDKLGG FAP+PS+GPHK RE LPL+I LRNRLKYALT  EV 
Sbjct: 27  RGPKKHLKRLNAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNSEVT 86

Query: 182 SILMQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNESFRLLYD 307
            I+MQR + VDGKVRTD  YPAGFMDVV+I KT E FRL+YD
Sbjct: 87  KIVMQRLIKVDGKVRTDPNYPAGFMDVVTIEKTGEFFRLIYD 128



 Score =  107 bits (267), Expect(2) = 6e-63
 Identities = 53/106 (50%), Positives = 73/106 (68%)
 Frame = +1

Query: 379 KANDTIKLDLDSNKIVDFIKFDXXXXXXXXXXXXXXXXXXLKNREKHKGSFETVHIQDAL 558
           K NDTI+L++ ++KI+D+IKF+                  + NRE+H GSF+ VHI+DA 
Sbjct: 144 KVNDTIQLEIATSKILDYIKFESGNLCQITGGRNLGRVGTVVNRERHPGSFDIVHIKDAN 203

Query: 559 GHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLAAQS 696
            H FATRL NVF +GKG+K + SLP+GKG+KLSI EE  KRLA+++
Sbjct: 204 EHVFATRLNNVFIIGKGSKAFASLPRGKGVKLSIAEERDKRLASKT 249


>gb|ELW61824.1| 40S ribosomal protein S4 [Tupaia chinensis]
          Length = 252

 Score =  151 bits (382), Expect(2) = 2e-61
 Identities = 73/101 (72%), Positives = 82/101 (81%)
 Frame = +2

Query: 2   RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIIILRNRLKYALTYREVI 181
           RG KKHLK++ APKHWMLDKL   FA +PS+GPHK RECLPLII LRNRLKYAL   EV 
Sbjct: 3   RGPKKHLKQVGAPKHWMLDKLTNVFALRPSTGPHKLRECLPLIIFLRNRLKYALAGDEVK 62

Query: 182 SILMQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNESFRLLY 304
            I MQR + +DGKVRTD TYPAGFMDV+SI KT E+FRL+Y
Sbjct: 63  KICMQRFIKIDGKVRTDTTYPAGFMDVISIDKTRENFRLIY 103



 Score =  112 bits (279), Expect(2) = 2e-61
 Identities = 52/108 (48%), Positives = 70/108 (64%)
 Frame = +1

Query: 355 IRYPDPLIKANDTIKLDLDSNKIVDFIKFDXXXXXXXXXXXXXXXXXXLKNREKHKGSFE 534
           I YPDPLIK NDTI++D+++ K  DFI+FD                  + NRE+H GS +
Sbjct: 142 ICYPDPLIKVNDTIQIDVETGKSSDFIEFDTGNLCMVTGGANLGRIGVITNRERHPGSSD 201

Query: 535 TVHIQDALGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARK 678
            VH++DA  + FATRL N+F +GKG KPW+SLP+GKG+ L+I  E  K
Sbjct: 202 VVHVKDANDNSFATRLSNIFVIGKGHKPWISLPRGKGVHLTIARERDK 249


>ref|XP_001913602.1| 40S ribosomal protein S4 [Entamoeba histolytica HM-1:IMSS]
           gi|169802405|gb|EDS89621.1| 40S ribosomal protein S4,
           putative [Entamoeba histolytica HM-1:IMSS]
          Length = 318

 Score =  153 bits (386), Expect(2) = 6e-60
 Identities = 70/103 (67%), Positives = 82/103 (79%)
 Frame = +2

Query: 2   RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIIILRNRLKYALTYREVI 181
           RG + HLKRLNAP HWML KLGG FAPKPS GPH  +ECLPLI+ILRNRL YAL  REV 
Sbjct: 3   RGPRHHLKRLNAPHHWMLSKLGGTFAPKPSHGPHGMKECLPLILILRNRLNYALNGREVT 62

Query: 182 SILMQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNESFRLLYDT 310
            I+  R + +DGK+RTD  YP GFMDV+SIP+T E+FRL+Y+T
Sbjct: 63  MIVKNRTIKIDGKIRTDTRYPVGFMDVLSIPRTKENFRLMYNT 105



 Score =  105 bits (262), Expect(2) = 6e-60
 Identities = 52/110 (47%), Positives = 70/110 (63%)
 Frame = +1

Query: 355 IRYPDPLIKANDTIKLDLDSNKIVDFIKFDXXXXXXXXXXXXXXXXXXLKNREKHKGSFE 534
           IRYP P ++ANDTIKL+L++ KIVDF+KFD                  +  RE H GSFE
Sbjct: 139 IRYPHPELQANDTIKLNLETGKIVDFVKFDIGNTAMMIGGNGMGRVGVIVKREVHPGSFE 198

Query: 535 TVHIQDALGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRL 684
            VHI+DA G+ F TRL NVF +GKGT+  V+LP  KGIK  ++++  + +
Sbjct: 199 IVHIKDAKGNTFTTRLNNVFVIGKGTETLVNLPLDKGIKKPLLQQVNETI 248


>gb|ERL92836.1| hypothetical protein D910_10143 [Dendroctonus ponderosae]
          Length = 265

 Score =  161 bits (407), Expect(2) = 6e-60
 Identities = 78/102 (76%), Positives = 85/102 (83%)
 Frame = +2

Query: 2   RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIIILRNRLKYALTYREVI 181
           RG KKHLKRLNAPK WMLDKLGG FAP+PS+GPHK RE LPL+I LRNRLKYALT  EV 
Sbjct: 27  RGPKKHLKRLNAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNSEVT 86

Query: 182 SILMQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNESFRLLYD 307
            I+MQR + VDGKVRTD  YPAGFMDVV+I KT E FRL+YD
Sbjct: 87  KIVMQRLIKVDGKVRTDPNYPAGFMDVVTIEKTGEFFRLIYD 128



 Score = 97.4 bits (241), Expect(2) = 6e-60
 Identities = 53/121 (43%), Positives = 73/121 (60%), Gaps = 15/121 (12%)
 Frame = +1

Query: 379 KANDTIKLDLDSNKIVDFIKFDXXXXXXXXXXXXXXXXXXLKNREKHKGSFETVHIQDAL 558
           K NDTI+L++ ++KI+D+IKF+                  + NRE+H GSF+ VHI+DA 
Sbjct: 144 KVNDTIQLEIATSKILDYIKFESGNLCQITGGRNLGRVGTVVNRERHPGSFDIVHIKDAN 203

Query: 559 GHEFAT---------------RLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLAAQ 693
            H FAT               RL NVF +GKG+K + SLP+GKG+KLSI EE  KRLA++
Sbjct: 204 EHVFATSKMCPACDLSTVFFCRLNNVFIIGKGSKAFASLPRGKGVKLSIAEERDKRLASK 263

Query: 694 S 696
           +
Sbjct: 264 T 264


>gb|ELK23579.1| 40S ribosomal protein S4 [Myotis davidii]
          Length = 210

 Score =  135 bits (340), Expect(2) = 4e-59
 Identities = 66/87 (75%), Positives = 73/87 (83%)
 Frame = +2

Query: 50  MLDKLGGAFAPKPSSGPHKSRECLPLIIILRNRLKYALTYREVISILMQRQVMVDGKVRT 229
           MLDKL G FAP+PS+GPHK RECLPLII LRNRLKYALT  EV  I MQR + +DGKVRT
Sbjct: 1   MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 60

Query: 230 DKTYPAGFMDVVSIPKTNESFRLLYDT 310
           D TYPAGFMDV+SI KT E+FRL+YDT
Sbjct: 61  DITYPAGFMDVISIDKTGENFRLIYDT 87



 Score =  120 bits (301), Expect(2) = 4e-59
 Identities = 56/108 (51%), Positives = 74/108 (68%)
 Frame = +1

Query: 379 KANDTIKLDLDSNKIVDFIKFDXXXXXXXXXXXXXXXXXXLKNREKHKGSFETVHIQDAL 558
           K NDTI+ DL++ KI DFIKFD                  + NRE+H GSF+ VH++DA 
Sbjct: 102 KVNDTIQTDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDAN 161

Query: 559 GHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLAAQSAT 702
           G+ FATRL N+F +GKG KPW+SLP+GKGI+L+I EE  KRLAA+ ++
Sbjct: 162 GNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 209


>ref|XP_006352980.1| PREDICTED: 40S ribosomal protein S4-like [Solanum tuberosum]
          Length = 264

 Score =  209 bits (533), Expect = 8e-52
 Identities = 101/103 (98%), Positives = 103/103 (100%)
 Frame = +2

Query: 2   RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIIILRNRLKYALTYREVI 181
           RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+IILRNRLKYALTYREVI
Sbjct: 3   RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVIILRNRLKYALTYREVI 62

Query: 182 SILMQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNESFRLLYDT 310
           SILMQRQVMVDGKVRTDKTYPAGFMDVV+IPKTNESFRLLYDT
Sbjct: 63  SILMQRQVMVDGKVRTDKTYPAGFMDVVTIPKTNESFRLLYDT 105



 Score =  187 bits (476), Expect = 3e-45
 Identities = 95/118 (80%), Positives = 98/118 (83%)
 Frame = +1

Query: 355 IRYPDPLIKANDTIKLDLDSNKIVDFIKFDXXXXXXXXXXXXXXXXXXLKNREKHKGSFE 534
           IRYPDPLIKANDTIKLDLDSNKIVDFIKFD                  LKNREKHKGSFE
Sbjct: 147 IRYPDPLIKANDTIKLDLDSNKIVDFIKFDVGNVVMVTGGRNRGRVGILKNREKHKGSFE 206

Query: 535 TVHIQDALGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLAAQSATAA 708
           TVHIQD+LGHEFATRLGNVFTLGKG+KPWVSLPKGKGIKLSIIEEARKR+A QSAT A
Sbjct: 207 TVHIQDSLGHEFATRLGNVFTLGKGSKPWVSLPKGKGIKLSIIEEARKRMATQSATTA 264


>ref|XP_006352979.1| PREDICTED: 40S ribosomal protein S4-like [Solanum tuberosum]
          Length = 264

 Score =  209 bits (533), Expect = 8e-52
 Identities = 101/103 (98%), Positives = 103/103 (100%)
 Frame = +2

Query: 2   RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIIILRNRLKYALTYREVI 181
           RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+IILRNRLKYALTYREVI
Sbjct: 3   RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVIILRNRLKYALTYREVI 62

Query: 182 SILMQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNESFRLLYDT 310
           SILMQRQVMVDGKVRTDKTYPAGFMDVV+IPKTNESFRLLYDT
Sbjct: 63  SILMQRQVMVDGKVRTDKTYPAGFMDVVTIPKTNESFRLLYDT 105



 Score =  187 bits (476), Expect = 3e-45
 Identities = 95/118 (80%), Positives = 98/118 (83%)
 Frame = +1

Query: 355 IRYPDPLIKANDTIKLDLDSNKIVDFIKFDXXXXXXXXXXXXXXXXXXLKNREKHKGSFE 534
           IRYPDPLIKANDTIKLDLDSNKIVDFIKFD                  LKNREKHKGSFE
Sbjct: 147 IRYPDPLIKANDTIKLDLDSNKIVDFIKFDVGNVVMVTGGRNRGRVGILKNREKHKGSFE 206

Query: 535 TVHIQDALGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLAAQSATAA 708
           TVHIQD+LGHEFATRLGNVFTLGKG+KPWVSLPKGKGIKLSIIEEARKR+A QSAT A
Sbjct: 207 TVHIQDSLGHEFATRLGNVFTLGKGSKPWVSLPKGKGIKLSIIEEARKRMATQSATTA 264


>ref|XP_004233134.1| PREDICTED: 40S ribosomal protein S4-like isoform 1 [Solanum
           lycopersicum] gi|460374676|ref|XP_004233136.1|
           PREDICTED: 40S ribosomal protein S4-like [Solanum
           lycopersicum] gi|460374678|ref|XP_004233137.1|
           PREDICTED: 40S ribosomal protein S4-like isoform 1
           [Solanum lycopersicum] gi|460374680|ref|XP_004233138.1|
           PREDICTED: 40S ribosomal protein S4-like isoform 2
           [Solanum lycopersicum]
          Length = 264

 Score =  209 bits (533), Expect = 8e-52
 Identities = 101/103 (98%), Positives = 103/103 (100%)
 Frame = +2

Query: 2   RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIIILRNRLKYALTYREVI 181
           RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+IILRNRLKYALTYREVI
Sbjct: 3   RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVIILRNRLKYALTYREVI 62

Query: 182 SILMQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNESFRLLYDT 310
           SILMQRQVMVDGKVRTDKTYPAGFMDVV+IPKTNESFRLLYDT
Sbjct: 63  SILMQRQVMVDGKVRTDKTYPAGFMDVVTIPKTNESFRLLYDT 105



 Score =  189 bits (480), Expect = 1e-45
 Identities = 96/118 (81%), Positives = 99/118 (83%)
 Frame = +1

Query: 355 IRYPDPLIKANDTIKLDLDSNKIVDFIKFDXXXXXXXXXXXXXXXXXXLKNREKHKGSFE 534
           IRYPDPLIKANDTIKLDLDSNKIVDFIKFD                  LKNREKHKGSFE
Sbjct: 147 IRYPDPLIKANDTIKLDLDSNKIVDFIKFDVGNVVMVTGGRNRGRVGILKNREKHKGSFE 206

Query: 535 TVHIQDALGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLAAQSATAA 708
           TVHIQD+LGHEFATRLGNVFTLGKG+KPWVSLPKGKGIKLSIIEEARKR+AAQSAT A
Sbjct: 207 TVHIQDSLGHEFATRLGNVFTLGKGSKPWVSLPKGKGIKLSIIEEARKRMAAQSATTA 264


>ref|XP_004233133.1| PREDICTED: 40S ribosomal protein S4-like [Solanum lycopersicum]
          Length = 264

 Score =  209 bits (533), Expect = 8e-52
 Identities = 101/103 (98%), Positives = 103/103 (100%)
 Frame = +2

Query: 2   RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIIILRNRLKYALTYREVI 181
           RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+IILRNRLKYALTYREVI
Sbjct: 3   RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVIILRNRLKYALTYREVI 62

Query: 182 SILMQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNESFRLLYDT 310
           SILMQRQVMVDGKVRTDKTYPAGFMDVV+IPKTNESFRLLYDT
Sbjct: 63  SILMQRQVMVDGKVRTDKTYPAGFMDVVTIPKTNESFRLLYDT 105



 Score =  191 bits (484), Expect = 4e-46
 Identities = 97/118 (82%), Positives = 100/118 (84%)
 Frame = +1

Query: 355 IRYPDPLIKANDTIKLDLDSNKIVDFIKFDXXXXXXXXXXXXXXXXXXLKNREKHKGSFE 534
           IRYPDPLIKANDTIKLDLDSNKIVDFIKFD                  LKNREKHKGSFE
Sbjct: 147 IRYPDPLIKANDTIKLDLDSNKIVDFIKFDVGNVVMVTGGRNRGRVGILKNREKHKGSFE 206

Query: 535 TVHIQDALGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLAAQSATAA 708
           TVHIQD+LGHEFATRLGNVFTLGKG+KPWVSLPKGKGIKLSIIEEARKR+AAQSATAA
Sbjct: 207 TVHIQDSLGHEFATRLGNVFTLGKGSKPWVSLPKGKGIKLSIIEEARKRMAAQSATAA 264


>ref|NP_001275148.1| 40S ribosomal protein S4 [Solanum tuberosum]
           gi|1173257|sp|P46300.1|RS4_SOLTU RecName: Full=40S
           ribosomal protein S4 gi|457803|emb|CAA54095.1| ribosomal
           protein S4 [Solanum tuberosum]
          Length = 264

 Score =  209 bits (531), Expect = 1e-51
 Identities = 100/103 (97%), Positives = 103/103 (100%)
 Frame = +2

Query: 2   RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIIILRNRLKYALTYREVI 181
           RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+II+RNRLKYALTYREVI
Sbjct: 3   RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVIIMRNRLKYALTYREVI 62

Query: 182 SILMQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNESFRLLYDT 310
           SILMQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNE+FRLLYDT
Sbjct: 63  SILMQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDT 105



 Score =  183 bits (464), Expect = 8e-44
 Identities = 92/118 (77%), Positives = 98/118 (83%)
 Frame = +1

Query: 355 IRYPDPLIKANDTIKLDLDSNKIVDFIKFDXXXXXXXXXXXXXXXXXXLKNREKHKGSFE 534
           IRYPDPLIKANDTIKLDL+SNKIVDFIKFD                  +KNREKHKGSFE
Sbjct: 147 IRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFE 206

Query: 535 TVHIQDALGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLAAQSATAA 708
           T+HIQD+ GHEFATRLGNVFTLGKGTKPWVSLPKGKGIKL+IIE+ARKRLAAQSAT A
Sbjct: 207 TLHIQDSQGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLTIIEDARKRLAAQSATPA 264


>ref|XP_006344073.1| PREDICTED: 40S ribosomal protein S4-like [Solanum tuberosum]
          Length = 264

 Score =  209 bits (531), Expect = 1e-51
 Identities = 100/103 (97%), Positives = 103/103 (100%)
 Frame = +2

Query: 2   RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIIILRNRLKYALTYREVI 181
           RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+II+RNRLKYALTYREVI
Sbjct: 3   RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVIIMRNRLKYALTYREVI 62

Query: 182 SILMQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNESFRLLYDT 310
           SILMQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNE+FRLLYDT
Sbjct: 63  SILMQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDT 105



 Score =  183 bits (464), Expect = 8e-44
 Identities = 92/118 (77%), Positives = 98/118 (83%)
 Frame = +1

Query: 355 IRYPDPLIKANDTIKLDLDSNKIVDFIKFDXXXXXXXXXXXXXXXXXXLKNREKHKGSFE 534
           IRYPDPLIKANDTIKLDL+SNKIVDFIKFD                  +KNREKHKGSFE
Sbjct: 147 IRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFE 206

Query: 535 TVHIQDALGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLAAQSATAA 708
           T+HIQD+ GHEFATRLGNVFTLGKGTKPWVSLPKGKGIKL+IIEEARK+LAAQSAT A
Sbjct: 207 TLHIQDSQGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLTIIEEARKKLAAQSATPA 264


>ref|XP_004240421.1| PREDICTED: 40S ribosomal protein S4-like [Solanum lycopersicum]
          Length = 264

 Score =  209 bits (531), Expect = 1e-51
 Identities = 100/103 (97%), Positives = 103/103 (100%)
 Frame = +2

Query: 2   RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIIILRNRLKYALTYREVI 181
           RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+II+RNRLKYALTYREVI
Sbjct: 3   RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVIIMRNRLKYALTYREVI 62

Query: 182 SILMQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNESFRLLYDT 310
           SILMQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNE+FRLLYDT
Sbjct: 63  SILMQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDT 105



 Score =  184 bits (467), Expect = 4e-44
 Identities = 93/118 (78%), Positives = 98/118 (83%)
 Frame = +1

Query: 355 IRYPDPLIKANDTIKLDLDSNKIVDFIKFDXXXXXXXXXXXXXXXXXXLKNREKHKGSFE 534
           IRYPDPLIKANDTIKLDL+SNKIVDFIKFD                  +KNREKHKGSFE
Sbjct: 147 IRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFE 206

Query: 535 TVHIQDALGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLAAQSATAA 708
           T+HIQD+ GHEFATRLGNVFTLGKGTKPWVSLPKGKGIKL+IIEEARKRLAAQSAT A
Sbjct: 207 TLHIQDSQGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLTIIEEARKRLAAQSATPA 264


>ref|NP_001275093.1| 40S ribosomal protein S4-like [Solanum tuberosum]
           gi|82400118|gb|ABB72798.1| 40S ribosomal protein S4-like
           protein [Solanum tuberosum]
          Length = 264

 Score =  209 bits (531), Expect = 1e-51
 Identities = 100/103 (97%), Positives = 103/103 (100%)
 Frame = +2

Query: 2   RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIIILRNRLKYALTYREVI 181
           RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+II+RNRLKYALTYREVI
Sbjct: 3   RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVIIMRNRLKYALTYREVI 62

Query: 182 SILMQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNESFRLLYDT 310
           SILMQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNE+FRLLYDT
Sbjct: 63  SILMQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDT 105



 Score =  183 bits (464), Expect = 8e-44
 Identities = 92/118 (77%), Positives = 98/118 (83%)
 Frame = +1

Query: 355 IRYPDPLIKANDTIKLDLDSNKIVDFIKFDXXXXXXXXXXXXXXXXXXLKNREKHKGSFE 534
           IRYPDPLIKANDTIKLDL+SNKIVDFIKFD                  +KNREKHKGSFE
Sbjct: 147 IRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFE 206

Query: 535 TVHIQDALGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLAAQSATAA 708
           T+HIQD+ GHEFATRLGNVFTLGKGTKPWVSLPKGKGIKL+IIEEA+KRLAAQSAT A
Sbjct: 207 TLHIQDSQGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLTIIEEAKKRLAAQSATPA 264


>gb|ELK17202.1| 40S ribosomal protein S4 [Pteropus alecto]
          Length = 258

 Score =  134 bits (336), Expect(2) = 8e-51
 Identities = 68/103 (66%), Positives = 77/103 (74%)
 Frame = +2

Query: 2   RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIIILRNRLKYALTYREVI 181
           RG KKHLK + APKHWMLDKL G FAP PS   HK +E LPLII LRN LKYALT  EV 
Sbjct: 34  RGPKKHLKWVAAPKHWMLDKLTGVFAPHPSISSHKLKESLPLIIFLRNSLKYALTGDEVK 93

Query: 182 SILMQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNESFRLLYDT 310
            I MQR + +DG+V+TD TYPAGFMDV+SI K  E++ LL DT
Sbjct: 94  KICMQRFIKIDGQVQTDVTYPAGFMDVISIDKIRENYCLLCDT 136



 Score = 94.4 bits (233), Expect(2) = 8e-51
 Identities = 46/102 (45%), Positives = 64/102 (62%)
 Frame = +1

Query: 397 KLDLDSNKIVDFIKFDXXXXXXXXXXXXXXXXXXLKNREKHKGSFETVHIQDALGHEFAT 576
           K+DL++ KI DFIKFD                  + NRE+H GS + VH++DA G+ FAT
Sbjct: 156 KIDLETGKITDFIKFDTGNLCMVTGSANLGRIGVITNRERHPGSCDVVHVKDANGNSFAT 215

Query: 577 RLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLAAQSAT 702
           RL N+F +GKG    +SLP GKGI L+I ++  KRLAA+ ++
Sbjct: 216 RLSNIFVIGKGNNQGISLPCGKGIHLTIAKDRDKRLAAKQSS 257


>ref|XP_002323021.2| hypothetical protein POPTR_0016s13210g [Populus trichocarpa]
           gi|550321414|gb|EEF04782.2| hypothetical protein
           POPTR_0016s13210g [Populus trichocarpa]
          Length = 263

 Score =  206 bits (524), Expect = 9e-51
 Identities = 99/103 (96%), Positives = 102/103 (99%)
 Frame = +2

Query: 2   RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIIILRNRLKYALTYREVI 181
           RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLI+ILRNRLKYALTYREVI
Sbjct: 3   RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVI 62

Query: 182 SILMQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNESFRLLYDT 310
           SILMQR V+VDGKVRTDKTYP+GFMDVVSIPKTNESFRLLYDT
Sbjct: 63  SILMQRHVLVDGKVRTDKTYPSGFMDVVSIPKTNESFRLLYDT 105



 Score =  178 bits (452), Expect = 2e-42
 Identities = 87/117 (74%), Positives = 95/117 (81%)
 Frame = +1

Query: 355 IRYPDPLIKANDTIKLDLDSNKIVDFIKFDXXXXXXXXXXXXXXXXXXLKNREKHKGSFE 534
           IRYPDPLIKANDTIKLDL+SNKIVDFIKFD                  +KNREKHKGSFE
Sbjct: 147 IRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFE 206

Query: 535 TVHIQDALGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLAAQSATA 705
           T+H+QDA GHEFATRLGNVFT+GKG+KPW+SLPKGKGIKLSIIEEA+KRLAA  A A
Sbjct: 207 TIHVQDATGHEFATRLGNVFTIGKGSKPWISLPKGKGIKLSIIEEAKKRLAASQAAA 263


>ref|XP_003611879.1| 40S ribosomal protein S4 [Medicago truncatula]
           gi|357516021|ref|XP_003628299.1| 40S ribosomal protein
           S4 [Medicago truncatula] gi|217074206|gb|ACJ85463.1|
           unknown [Medicago truncatula]
           gi|355513214|gb|AES94837.1| 40S ribosomal protein S4
           [Medicago truncatula] gi|355522321|gb|AET02775.1| 40S
           ribosomal protein S4 [Medicago truncatula]
           gi|388493800|gb|AFK34966.1| unknown [Medicago
           truncatula] gi|388509492|gb|AFK42812.1| unknown
           [Medicago truncatula]
          Length = 265

 Score =  206 bits (524), Expect = 9e-51
 Identities = 99/103 (96%), Positives = 102/103 (99%)
 Frame = +2

Query: 2   RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLIIILRNRLKYALTYREVI 181
           RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLI+ILRNRLKYALTYREVI
Sbjct: 3   RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVI 62

Query: 182 SILMQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNESFRLLYDT 310
           +ILMQR V+VDGKVRTDKTYPAGFMDVVSIPKTNESFRLLYDT
Sbjct: 63  AILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNESFRLLYDT 105



 Score =  168 bits (426), Expect = 2e-39
 Identities = 84/119 (70%), Positives = 94/119 (78%), Gaps = 1/119 (0%)
 Frame = +1

Query: 355 IRYPDPLIKANDTIKLDLDSNKIVDFIKFDXXXXXXXXXXXXXXXXXXLKNREKHKGSFE 534
           IRYPDP+I+ANDTIKLDL+ NKIVDFIKFD                  +KNREKHKG+FE
Sbjct: 147 IRYPDPVIRANDTIKLDLEENKIVDFIKFDVGNVVMVTGGKNRGRVGVIKNREKHKGTFE 206

Query: 535 TVHIQDALGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKR-LAAQSATAA 708
           T+H+QDA GHEFATRL NVFT+GKGTKPWVSLPKGKGIKL++IEEARKR  AAQ A AA
Sbjct: 207 TIHVQDATGHEFATRLVNVFTIGKGTKPWVSLPKGKGIKLTVIEEARKRAAAAQQAVAA 265