BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00005550
         (768 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006339570.1| PREDICTED: mediator of RNA polymerase II tra...   357   2e-96
ref|XP_004229878.1| PREDICTED: mediator of RNA polymerase II tra...   355   1e-95
ref|XP_006445035.1| hypothetical protein CICLE_v10018441mg [Citr...   261   2e-67
ref|XP_006445033.1| hypothetical protein CICLE_v10018441mg [Citr...   261   2e-67
ref|XP_002274479.2| PREDICTED: uncharacterized protein LOC100263...   254   2e-65
emb|CBI40380.3| unnamed protein product [Vitis vinifera]              254   2e-65
ref|XP_004306783.1| PREDICTED: mediator of RNA polymerase II tra...   245   1e-62
gb|EOX95959.1| Mediator of RNA polymerase II transcription subun...   239   7e-61
gb|EOX95958.1| Mediator of RNA polymerase II transcription subun...   239   7e-61
gb|EOX95957.1| Mediator of RNA polymerase II transcription subun...   239   7e-61
gb|EXC06808.1| Putative mediator of RNA polymerase II transcript...   239   1e-60
gb|EMJ21769.1| hypothetical protein PRUPE_ppa000036mg [Prunus pe...   236   6e-60
ref|XP_002320796.2| hypothetical protein POPTR_0014s080202g, par...   236   8e-60
ref|XP_002302587.2| CRYPTIC PRECOCIOUS family protein [Populus t...   234   2e-59
ref|XP_004155825.1| PREDICTED: mediator of RNA polymerase II tra...   224   2e-56
ref|XP_004133865.1| PREDICTED: mediator of RNA polymerase II tra...   224   2e-56
ref|XP_002511863.1| CRP, putative [Ricinus communis] gi|22354904...   223   6e-56
ref|XP_004510784.1| PREDICTED: mediator of RNA polymerase II tra...   220   4e-55
ref|XP_006576321.1| PREDICTED: mediator of RNA polymerase II tra...   209   8e-52
ref|XP_006827602.1| hypothetical protein AMTR_s00009p00238900 [A...   206   5e-51

>ref|XP_006339570.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            12-like isoform X1 [Solanum tuberosum]
            gi|565344967|ref|XP_006339571.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 12-like isoform
            X2 [Solanum tuberosum]
          Length = 2262

 Score =  357 bits (917), Expect = 2e-96
 Identities = 197/256 (76%), Positives = 205/256 (80%)
 Frame = -1

Query: 768  LVDLILPCLDQASDDSRSTFATDMIKQMNHIEQQINAVTREASKPAGTVASGIESPTTKS 589
            LVDLILPCLDQASDDSRSTFA+DMIKQMN IEQQINAVTREASKPAGTVASGIESPTTKS
Sbjct: 1890 LVDLILPCLDQASDDSRSTFASDMIKQMNLIEQQINAVTREASKPAGTVASGIESPTTKS 1949

Query: 588  SRKGTRGSSPGLARRAAGPAETIXXXXXXXXXXXXLRLQFILRLFPIIYADREPSARNMR 409
            SRKGTRGSSPGLARRA GPAET+            LRLQFILRLF IIYADREPS RNMR
Sbjct: 1950 SRKGTRGSSPGLARRATGPAETMPPSPAALRASLSLRLQFILRLFSIIYADREPSGRNMR 2009

Query: 408  YMLASVILRILGSRVVHEDASHSFNQAYSSKREVDSLVEASATASVVMSFESLFDRXXXX 229
            ++LASVILRILGSRVVHEDASHSFNQA SSKREVDSLVEASATASVV+S ESLFDR    
Sbjct: 2010 HVLASVILRILGSRVVHEDASHSFNQACSSKREVDSLVEASATASVVVSLESLFDRLLLL 2069

Query: 228  XXXXXXXHQPCWLXXXXXXXXXXXXXXXXSAFEREAAENLQNELDRMQLPETVRWRIQSA 49
                   HQP WL                SAFERE AE+LQN+LDRMQLPETVRWRIQ A
Sbjct: 2070 LHGLLSCHQPRWLKWKSSSKAPRESSKDYSAFEREGAESLQNDLDRMQLPETVRWRIQCA 2129

Query: 48   MPLLFSSARWPISCQP 1
            MP+LF SAR  ISCQP
Sbjct: 2130 MPILFPSARLSISCQP 2145


>ref|XP_004229878.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            12-like [Solanum lycopersicum]
          Length = 2262

 Score =  355 bits (910), Expect = 1e-95
 Identities = 195/256 (76%), Positives = 205/256 (80%)
 Frame = -1

Query: 768  LVDLILPCLDQASDDSRSTFATDMIKQMNHIEQQINAVTREASKPAGTVASGIESPTTKS 589
            LVDLILPCLDQASDDSRSTFA+DMIKQMN IEQQINAVTREASKPAGTVASGIESPTTKS
Sbjct: 1890 LVDLILPCLDQASDDSRSTFASDMIKQMNLIEQQINAVTREASKPAGTVASGIESPTTKS 1949

Query: 588  SRKGTRGSSPGLARRAAGPAETIXXXXXXXXXXXXLRLQFILRLFPIIYADREPSARNMR 409
            SRKGTRGSSPGLARRA GPAET+            LRLQFILRLF IIYADREPS RNMR
Sbjct: 1950 SRKGTRGSSPGLARRATGPAETVPPSPGALRASLSLRLQFILRLFSIIYADREPSGRNMR 2009

Query: 408  YMLASVILRILGSRVVHEDASHSFNQAYSSKREVDSLVEASATASVVMSFESLFDRXXXX 229
            ++LASVILRILGSRVVHEDAS+SFNQA +SKREVDSLVEASATASVV+S ESLFDR    
Sbjct: 2010 HVLASVILRILGSRVVHEDASYSFNQACNSKREVDSLVEASATASVVVSLESLFDRLLLL 2069

Query: 228  XXXXXXXHQPCWLXXXXXXXXXXXXXXXXSAFEREAAENLQNELDRMQLPETVRWRIQSA 49
                   HQP WL                SAFERE AE+LQN+LDRMQLPETVRWRIQ A
Sbjct: 2070 LHGLLSSHQPRWLKWKSNSKAPSESSKDYSAFEREGAESLQNDLDRMQLPETVRWRIQCA 2129

Query: 48   MPLLFSSARWPISCQP 1
            MP+LF SAR  ISCQP
Sbjct: 2130 MPILFPSARLSISCQP 2145


>ref|XP_006445035.1| hypothetical protein CICLE_v10018441mg [Citrus clementina]
            gi|567905096|ref|XP_006445036.1| hypothetical protein
            CICLE_v10018441mg [Citrus clementina]
            gi|567905098|ref|XP_006445037.1| hypothetical protein
            CICLE_v10018441mg [Citrus clementina]
            gi|568876055|ref|XP_006491101.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 12-like isoform
            X1 [Citrus sinensis] gi|568876057|ref|XP_006491102.1|
            PREDICTED: mediator of RNA polymerase II transcription
            subunit 12-like isoform X2 [Citrus sinensis]
            gi|557547297|gb|ESR58275.1| hypothetical protein
            CICLE_v10018441mg [Citrus clementina]
            gi|557547298|gb|ESR58276.1| hypothetical protein
            CICLE_v10018441mg [Citrus clementina]
            gi|557547299|gb|ESR58277.1| hypothetical protein
            CICLE_v10018441mg [Citrus clementina]
          Length = 2277

 Score =  261 bits (666), Expect = 2e-67
 Identities = 144/258 (55%), Positives = 175/258 (67%), Gaps = 3/258 (1%)
 Frame = -1

Query: 765  VDLILPCLDQASDDSRSTFATDMIKQMNHIEQQINAVTREASKPAGTVASGIESPTTK-S 589
            ++L+LPC+DQ+SDDSR+TFA D+IKQ+N+IEQQI+AVTR A+K  G+V SGIE P+ K S
Sbjct: 1905 IELVLPCIDQSSDDSRNTFANDLIKQLNNIEQQISAVTRGANKLTGSVPSGIEVPSNKGS 1964

Query: 588  SRKGTRGSSPGLARRAAGPAETIXXXXXXXXXXXXLRLQFILRLFPIIYADREPSARNMR 409
            +RK  RG SPGLARR A  A+              LRLQF+LRL P+IY D EPS RNMR
Sbjct: 1965 NRKSIRGGSPGLARRLAATADPAPPSPAALRASMSLRLQFLLRLLPLIYTDGEPSGRNMR 2024

Query: 408  YMLASVILRILGSRVVHEDASHSF--NQAYSSKREVDSLVEASATASVVMSFESLFDRXX 235
            Y+LASVILR+LGSRVVHEDA  SF   Q+  SKREV+SL EAS+  S   S ESLFDR  
Sbjct: 2025 YLLASVILRLLGSRVVHEDADLSFYPTQSPQSKREVESLPEASSVPSADFSGESLFDRLL 2084

Query: 234  XXXXXXXXXHQPCWLXXXXXXXXXXXXXXXXSAFEREAAENLQNELDRMQLPETVRWRIQ 55
                      QP WL                S F+RE AE+LQN+LD MQLP+TVRWRIQ
Sbjct: 2085 LVLYGLLSSCQPSWLRPKPAFKSSNNTLKDSSGFDREIAESLQNDLDHMQLPDTVRWRIQ 2144

Query: 54   SAMPLLFSSARWPISCQP 1
            +A+P+L  S R  ++CQP
Sbjct: 2145 AAIPILLPSVRCSLTCQP 2162


>ref|XP_006445033.1| hypothetical protein CICLE_v10018441mg [Citrus clementina]
            gi|567905092|ref|XP_006445034.1| hypothetical protein
            CICLE_v10018441mg [Citrus clementina]
            gi|567905100|ref|XP_006445038.1| hypothetical protein
            CICLE_v10018441mg [Citrus clementina]
            gi|568876059|ref|XP_006491103.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 12-like isoform
            X3 [Citrus sinensis] gi|557547295|gb|ESR58273.1|
            hypothetical protein CICLE_v10018441mg [Citrus
            clementina] gi|557547296|gb|ESR58274.1| hypothetical
            protein CICLE_v10018441mg [Citrus clementina]
            gi|557547300|gb|ESR58278.1| hypothetical protein
            CICLE_v10018441mg [Citrus clementina]
          Length = 2239

 Score =  261 bits (666), Expect = 2e-67
 Identities = 144/258 (55%), Positives = 175/258 (67%), Gaps = 3/258 (1%)
 Frame = -1

Query: 765  VDLILPCLDQASDDSRSTFATDMIKQMNHIEQQINAVTREASKPAGTVASGIESPTTK-S 589
            ++L+LPC+DQ+SDDSR+TFA D+IKQ+N+IEQQI+AVTR A+K  G+V SGIE P+ K S
Sbjct: 1867 IELVLPCIDQSSDDSRNTFANDLIKQLNNIEQQISAVTRGANKLTGSVPSGIEVPSNKGS 1926

Query: 588  SRKGTRGSSPGLARRAAGPAETIXXXXXXXXXXXXLRLQFILRLFPIIYADREPSARNMR 409
            +RK  RG SPGLARR A  A+              LRLQF+LRL P+IY D EPS RNMR
Sbjct: 1927 NRKSIRGGSPGLARRLAATADPAPPSPAALRASMSLRLQFLLRLLPLIYTDGEPSGRNMR 1986

Query: 408  YMLASVILRILGSRVVHEDASHSF--NQAYSSKREVDSLVEASATASVVMSFESLFDRXX 235
            Y+LASVILR+LGSRVVHEDA  SF   Q+  SKREV+SL EAS+  S   S ESLFDR  
Sbjct: 1987 YLLASVILRLLGSRVVHEDADLSFYPTQSPQSKREVESLPEASSVPSADFSGESLFDRLL 2046

Query: 234  XXXXXXXXXHQPCWLXXXXXXXXXXXXXXXXSAFEREAAENLQNELDRMQLPETVRWRIQ 55
                      QP WL                S F+RE AE+LQN+LD MQLP+TVRWRIQ
Sbjct: 2047 LVLYGLLSSCQPSWLRPKPAFKSSNNTLKDSSGFDREIAESLQNDLDHMQLPDTVRWRIQ 2106

Query: 54   SAMPLLFSSARWPISCQP 1
            +A+P+L  S R  ++CQP
Sbjct: 2107 AAIPILLPSVRCSLTCQP 2124


>ref|XP_002274479.2| PREDICTED: uncharacterized protein LOC100263628 [Vitis vinifera]
          Length = 2272

 Score =  254 bits (649), Expect = 2e-65
 Identities = 146/259 (56%), Positives = 174/259 (67%), Gaps = 3/259 (1%)
 Frame = -1

Query: 768  LVDLILPCLDQASDDSRSTFATDMIKQMNHIEQQINAVTREASKPAGTVASGIESPTTK- 592
            LV+L+LPC+DQ+SDDSR+ FA+D+IKQM+ IEQQIN VTR  +K AGTV SG+E P  K 
Sbjct: 1904 LVELVLPCIDQSSDDSRNAFASDLIKQMHIIEQQINTVTRGTTKQAGTVLSGVEGPANKG 1963

Query: 591  SSRKGTRGSSPGLARRAAGPAETIXXXXXXXXXXXXLRLQFILRLFPIIYADREPSARNM 412
            ++RKG RG SPGLARR  G A++             LRLQF+LRL PII A+ E S RNM
Sbjct: 1964 NNRKGMRGGSPGLARRPTGVADSAPPSPAALRASMALRLQFLLRLLPIICAEGEQS-RNM 2022

Query: 411  RYMLASVILRILGSRVVHEDASHSF--NQAYSSKREVDSLVEASATASVVMSFESLFDRX 238
            R  LASVILR+LGSRVVHEDA  S    Q+  SKRE +SL+EAS  AS+ +S ESLFDR 
Sbjct: 2023 RQSLASVILRLLGSRVVHEDADLSLYSTQSPPSKREAESLMEASTAASLDLSGESLFDRL 2082

Query: 237  XXXXXXXXXXHQPCWLXXXXXXXXXXXXXXXXSAFEREAAENLQNELDRMQLPETVRWRI 58
                       QP WL                S F+REAAENLQN+LD MQLP+T+RWRI
Sbjct: 2083 LLVLHGLLSSCQPSWLKSKSASKSTTESIKEFSGFDREAAENLQNDLDCMQLPDTIRWRI 2142

Query: 57   QSAMPLLFSSARWPISCQP 1
            Q+AMP+L  S R  ISCQP
Sbjct: 2143 QAAMPILVPSGRCSISCQP 2161


>emb|CBI40380.3| unnamed protein product [Vitis vinifera]
          Length = 2037

 Score =  254 bits (649), Expect = 2e-65
 Identities = 146/259 (56%), Positives = 174/259 (67%), Gaps = 3/259 (1%)
 Frame = -1

Query: 768  LVDLILPCLDQASDDSRSTFATDMIKQMNHIEQQINAVTREASKPAGTVASGIESPTTK- 592
            LV+L+LPC+DQ+SDDSR+ FA+D+IKQM+ IEQQIN VTR  +K AGTV SG+E P  K 
Sbjct: 1669 LVELVLPCIDQSSDDSRNAFASDLIKQMHIIEQQINTVTRGTTKQAGTVLSGVEGPANKG 1728

Query: 591  SSRKGTRGSSPGLARRAAGPAETIXXXXXXXXXXXXLRLQFILRLFPIIYADREPSARNM 412
            ++RKG RG SPGLARR  G A++             LRLQF+LRL PII A+ E S RNM
Sbjct: 1729 NNRKGMRGGSPGLARRPTGVADSAPPSPAALRASMALRLQFLLRLLPIICAEGEQS-RNM 1787

Query: 411  RYMLASVILRILGSRVVHEDASHSF--NQAYSSKREVDSLVEASATASVVMSFESLFDRX 238
            R  LASVILR+LGSRVVHEDA  S    Q+  SKRE +SL+EAS  AS+ +S ESLFDR 
Sbjct: 1788 RQSLASVILRLLGSRVVHEDADLSLYSTQSPPSKREAESLMEASTAASLDLSGESLFDRL 1847

Query: 237  XXXXXXXXXXHQPCWLXXXXXXXXXXXXXXXXSAFEREAAENLQNELDRMQLPETVRWRI 58
                       QP WL                S F+REAAENLQN+LD MQLP+T+RWRI
Sbjct: 1848 LLVLHGLLSSCQPSWLKSKSASKSTTESIKEFSGFDREAAENLQNDLDCMQLPDTIRWRI 1907

Query: 57   QSAMPLLFSSARWPISCQP 1
            Q+AMP+L  S R  ISCQP
Sbjct: 1908 QAAMPILVPSGRCSISCQP 1926


>ref|XP_004306783.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            12-like [Fragaria vesca subsp. vesca]
          Length = 2261

 Score =  245 bits (625), Expect = 1e-62
 Identities = 138/259 (53%), Positives = 172/259 (66%), Gaps = 3/259 (1%)
 Frame = -1

Query: 768  LVDLILPCLDQASDDSRSTFATDMIKQMNHIEQQINAVTREASKPAGTVASGIESPTTK- 592
            L++L+LPC+DQ+SDDSR+TFA D+IKQ+++IEQQI+ VTR  SK AG   SGIE PT+K 
Sbjct: 1891 LIELLLPCIDQSSDDSRNTFANDLIKQLSNIEQQISTVTRGTSKQAGQTPSGIEGPTSKG 1950

Query: 591  SSRKGTRGSSPGLARRAAGPAETIXXXXXXXXXXXXLRLQFILRLFPIIYADREPSARNM 412
            ++RKG RG SPGLARRAAG A++             LRLQ +LRL PIIYADREPSARNM
Sbjct: 1951 NNRKGIRGGSPGLARRAAGAADSAPPSPAALRASMSLRLQLLLRLLPIIYADREPSARNM 2010

Query: 411  RYMLASVILRILGSRVVHEDASHSF--NQAYSSKREVDSLVEASATASVVMSFESLFDRX 238
            R+ LA V+LR+LG+RVVHE  S     +Q+  SKRE DS  +A+  A   +S ESLFD  
Sbjct: 2011 RHGLALVVLRLLGNRVVHEYQSTPLTPSQSSLSKRESDSSTDAATAAFTDLSSESLFDEL 2070

Query: 237  XXXXXXXXXXHQPCWLXXXXXXXXXXXXXXXXSAFEREAAENLQNELDRMQLPETVRWRI 58
                       QP WL                 AF+ E AENLQN+LDRMQLP++VRWRI
Sbjct: 2071 LLVLHGLLSSCQPSWL---RSTKPTKESGKGFVAFDPELAENLQNDLDRMQLPDSVRWRI 2127

Query: 57   QSAMPLLFSSARWPISCQP 1
            Q+AMP++  S R  +SC P
Sbjct: 2128 QTAMPVIIPSIRCFVSCHP 2146


>gb|EOX95959.1| Mediator of RNA polymerase II transcription subunit 12 isoform 3
            [Theobroma cacao]
          Length = 2257

 Score =  239 bits (610), Expect = 7e-61
 Identities = 141/257 (54%), Positives = 169/257 (65%), Gaps = 3/257 (1%)
 Frame = -1

Query: 762  DLILPCLDQASDDSRSTFATDMIKQMNHIEQQINAVTREASKPAGTVASGIESPTTK-SS 586
            +L+LPC+DQ+SDDSR+TFA+D+IKQ N IEQQIN+VTR  SK  GT  SGIE  T K ++
Sbjct: 1894 ELVLPCIDQSSDDSRNTFASDLIKQFNIIEQQINSVTRGVSKQTGTATSGIEGSTNKGNN 1953

Query: 585  RKGTRGSSPGLARR--AAGPAETIXXXXXXXXXXXXLRLQFILRLFPIIYADREPSARNM 412
            RKG RGSSPGLARR  A   AE++            LRLQFI+RL PII AD EPS RNM
Sbjct: 1954 RKGIRGSSPGLARRTTATASAESVPPSPAALRASMSLRLQFIVRLLPIICADGEPSTRNM 2013

Query: 411  RYMLASVILRILGSRVVHEDASHSFNQAYSSKREVDSLVEASATASVVMSFESLFDRXXX 232
            R+MLASVILR+LGSRVVHED   SFN     KR+++ +   S+ AS  +S +SLFDR   
Sbjct: 2014 RHMLASVILRLLGSRVVHEDVDLSFN-LVQLKRDMELM---SSVASSELSGDSLFDRLLL 2069

Query: 231  XXXXXXXXHQPCWLXXXXXXXXXXXXXXXXSAFEREAAENLQNELDRMQLPETVRWRIQS 52
                     QP WL                + F+REA E+LQNELD MQLPE +RWRIQ+
Sbjct: 2070 VLHGLLSSSQPSWL----GSKPASKHTSEFTGFDREAVESLQNELDSMQLPEMIRWRIQA 2125

Query: 51   AMPLLFSSARWPISCQP 1
            AMP+LF S R  ISC P
Sbjct: 2126 AMPILFPSFRNLISCHP 2142


>gb|EOX95958.1| Mediator of RNA polymerase II transcription subunit 12 isoform 2
            [Theobroma cacao]
          Length = 2237

 Score =  239 bits (610), Expect = 7e-61
 Identities = 141/257 (54%), Positives = 169/257 (65%), Gaps = 3/257 (1%)
 Frame = -1

Query: 762  DLILPCLDQASDDSRSTFATDMIKQMNHIEQQINAVTREASKPAGTVASGIESPTTK-SS 586
            +L+LPC+DQ+SDDSR+TFA+D+IKQ N IEQQIN+VTR  SK  GT  SGIE  T K ++
Sbjct: 1894 ELVLPCIDQSSDDSRNTFASDLIKQFNIIEQQINSVTRGVSKQTGTATSGIEGSTNKGNN 1953

Query: 585  RKGTRGSSPGLARR--AAGPAETIXXXXXXXXXXXXLRLQFILRLFPIIYADREPSARNM 412
            RKG RGSSPGLARR  A   AE++            LRLQFI+RL PII AD EPS RNM
Sbjct: 1954 RKGIRGSSPGLARRTTATASAESVPPSPAALRASMSLRLQFIVRLLPIICADGEPSTRNM 2013

Query: 411  RYMLASVILRILGSRVVHEDASHSFNQAYSSKREVDSLVEASATASVVMSFESLFDRXXX 232
            R+MLASVILR+LGSRVVHED   SFN     KR+++ +   S+ AS  +S +SLFDR   
Sbjct: 2014 RHMLASVILRLLGSRVVHEDVDLSFN-LVQLKRDMELM---SSVASSELSGDSLFDRLLL 2069

Query: 231  XXXXXXXXHQPCWLXXXXXXXXXXXXXXXXSAFEREAAENLQNELDRMQLPETVRWRIQS 52
                     QP WL                + F+REA E+LQNELD MQLPE +RWRIQ+
Sbjct: 2070 VLHGLLSSSQPSWL----GSKPASKHTSEFTGFDREAVESLQNELDSMQLPEMIRWRIQA 2125

Query: 51   AMPLLFSSARWPISCQP 1
            AMP+LF S R  ISC P
Sbjct: 2126 AMPILFPSFRNLISCHP 2142


>gb|EOX95957.1| Mediator of RNA polymerase II transcription subunit 12 isoform 1
            [Theobroma cacao]
          Length = 2261

 Score =  239 bits (610), Expect = 7e-61
 Identities = 141/257 (54%), Positives = 169/257 (65%), Gaps = 3/257 (1%)
 Frame = -1

Query: 762  DLILPCLDQASDDSRSTFATDMIKQMNHIEQQINAVTREASKPAGTVASGIESPTTK-SS 586
            +L+LPC+DQ+SDDSR+TFA+D+IKQ N IEQQIN+VTR  SK  GT  SGIE  T K ++
Sbjct: 1898 ELVLPCIDQSSDDSRNTFASDLIKQFNIIEQQINSVTRGVSKQTGTATSGIEGSTNKGNN 1957

Query: 585  RKGTRGSSPGLARR--AAGPAETIXXXXXXXXXXXXLRLQFILRLFPIIYADREPSARNM 412
            RKG RGSSPGLARR  A   AE++            LRLQFI+RL PII AD EPS RNM
Sbjct: 1958 RKGIRGSSPGLARRTTATASAESVPPSPAALRASMSLRLQFIVRLLPIICADGEPSTRNM 2017

Query: 411  RYMLASVILRILGSRVVHEDASHSFNQAYSSKREVDSLVEASATASVVMSFESLFDRXXX 232
            R+MLASVILR+LGSRVVHED   SFN     KR+++ +   S+ AS  +S +SLFDR   
Sbjct: 2018 RHMLASVILRLLGSRVVHEDVDLSFN-LVQLKRDMELM---SSVASSELSGDSLFDRLLL 2073

Query: 231  XXXXXXXXHQPCWLXXXXXXXXXXXXXXXXSAFEREAAENLQNELDRMQLPETVRWRIQS 52
                     QP WL                + F+REA E+LQNELD MQLPE +RWRIQ+
Sbjct: 2074 VLHGLLSSSQPSWL----GSKPASKHTSEFTGFDREAVESLQNELDSMQLPEMIRWRIQA 2129

Query: 51   AMPLLFSSARWPISCQP 1
            AMP+LF S R  ISC P
Sbjct: 2130 AMPILFPSFRNLISCHP 2146


>gb|EXC06808.1| Putative mediator of RNA polymerase II transcription subunit 12
            [Morus notabilis]
          Length = 2274

 Score =  239 bits (609), Expect = 1e-60
 Identities = 134/260 (51%), Positives = 167/260 (64%), Gaps = 4/260 (1%)
 Frame = -1

Query: 768  LVDLILPCLDQASDDSRSTFATDMIKQMNHIEQQINAVTREASKPAGTVASGIESPTTK- 592
            LVDL+LPC+DQ+SDDSR+TFA+D+IKQ N+IEQQ+N +TR   K AG  +SGIE P TK 
Sbjct: 1900 LVDLLLPCIDQSSDDSRNTFASDLIKQFNNIEQQVNTITRGLDKQAGPTSSGIEGPATKG 1959

Query: 591  SSRKGTRGSSPGLARR-AAGPAETIXXXXXXXXXXXXLRLQFILRLFPIIYADREPSARN 415
            S+RK  +G SPGLARR     A++             LRLQ +LRL P+IYAD EPS +N
Sbjct: 1960 SNRKVIKGGSPGLARRTTTSAADSALPTPAALRASMLLRLQLLLRLLPVIYADGEPSGKN 2019

Query: 414  MRYMLASVILRILGSRVVHEDASHSFN--QAYSSKREVDSLVEASATASVVMSFESLFDR 241
            MR+ LASVILR+LG+RVVHED   S N  Q   SKREV+S  +A++     +S  SLFDR
Sbjct: 2020 MRHTLASVILRLLGNRVVHEDVDLSLNHIQHNLSKREVESSTDAASAIITDLSGGSLFDR 2079

Query: 240  XXXXXXXXXXXHQPCWLXXXXXXXXXXXXXXXXSAFEREAAENLQNELDRMQLPETVRWR 61
                        QP WL                S  +RE AENLQN+LDRMQLP+ +RWR
Sbjct: 2080 LLLVLHVLLSGVQPSWLRSKPGPKSTNEYTRDISVIDRELAENLQNDLDRMQLPDMIRWR 2139

Query: 60   IQSAMPLLFSSARWPISCQP 1
            IQ+AMP+L  S R  ++CQP
Sbjct: 2140 IQTAMPVLLPSVRCFVNCQP 2159


>gb|EMJ21769.1| hypothetical protein PRUPE_ppa000036mg [Prunus persica]
          Length = 2210

 Score =  236 bits (602), Expect = 6e-60
 Identities = 133/259 (51%), Positives = 174/259 (67%), Gaps = 3/259 (1%)
 Frame = -1

Query: 768  LVDLILPCLDQASDDSRSTFATDMIKQMNHIEQQINAVTREASKPAGTVASGIESPTTK- 592
            L++L+LPC+DQ+SDDSR+TFA D+IKQ+++IE QI+AVTR  +K AG   SG+E PT+K 
Sbjct: 1840 LIELLLPCIDQSSDDSRNTFANDLIKQLSNIEVQISAVTRGTNKQAGPAPSGVEGPTSKG 1899

Query: 591  SSRKGTRGSSPGLARRAAGPAETIXXXXXXXXXXXXLRLQFILRLFPIIYADREPSARNM 412
            ++RKG RG SPGLARRAA  A++             LRLQ +LRL PII ADREPS RNM
Sbjct: 1900 NNRKGIRGGSPGLARRAAVAADSAPPSPAALRASMSLRLQLLLRLLPIICADREPSGRNM 1959

Query: 411  RYMLASVILRILGSRVVHEDASHSFN--QAYSSKREVDSLVEASATASVVMSFESLFDRX 238
            R  LASV+LR+LG+RVV+EDA    N  Q+  SKRE +S  EA++ +   +S ESLFD+ 
Sbjct: 1960 RQGLASVVLRLLGNRVVNEDAELCVNLLQSSFSKREAESSTEAASASFADLSSESLFDQL 2019

Query: 237  XXXXXXXXXXHQPCWLXXXXXXXXXXXXXXXXSAFEREAAENLQNELDRMQLPETVRWRI 58
                       QP WL                +AF+RE A++LQ++LDRMQLPE +RWRI
Sbjct: 2020 LLVLHGLLSSCQPSWL---RPTKSTNESGKDFAAFDREMADHLQSDLDRMQLPERIRWRI 2076

Query: 57   QSAMPLLFSSARWPISCQP 1
            Q+AMP++  S R  +SCQP
Sbjct: 2077 QTAMPVVVPSIRCFVSCQP 2095


>ref|XP_002320796.2| hypothetical protein POPTR_0014s080202g, partial [Populus
            trichocarpa] gi|550323753|gb|EEE99111.2| hypothetical
            protein POPTR_0014s080202g, partial [Populus trichocarpa]
          Length = 1089

 Score =  236 bits (601), Expect = 8e-60
 Identities = 139/260 (53%), Positives = 166/260 (63%), Gaps = 4/260 (1%)
 Frame = -1

Query: 768  LVDLILPCLDQASDDSRSTFATDMIKQMNHIEQQINAVTREASKPAGTVASGIESPTTKS 589
            LV+L+LPC+DQ SDDSR+TFATD+IKQ+N+IEQQIN+VT   SK  GT +SG+E P  KS
Sbjct: 719  LVELVLPCIDQGSDDSRNTFATDLIKQLNNIEQQINSVTHGTSKQTGTTSSGLEGPANKS 778

Query: 588  S-RKGTRGSSPGLARRAAGPAETIXXXXXXXXXXXXLRLQFILRLFPIIYADREPSARNM 412
            + RKG RG SPGL RRAA  A++             LRLQ +LRL P I  D EPS RNM
Sbjct: 779  NNRKGIRGGSPGLVRRAAATADSTLPSPAALRASMSLRLQLLLRLLPTICTDGEPSGRNM 838

Query: 411  RYMLASVILRILGSRVVHEDASHSFN--QAYSSKREVDSLVEASATASVVMSFESLFDRX 238
            R MLASVILR+LGSRVVHEDA  SF   Q++ SKRE++  +EA   AS  +S  SLFDR 
Sbjct: 839  RQMLASVILRLLGSRVVHEDAELSFYPLQSFQSKRELELQLEA---ASADLSGGSLFDRL 895

Query: 237  XXXXXXXXXXHQPCWLXXXXXXXXXXXXXXXXSA-FEREAAENLQNELDRMQLPETVRWR 61
                        P WL                 A F+RE  E+LQN+LDRMQLP  ++ R
Sbjct: 896  LLILHGLLSSSWPSWLKSRSASSSKAVNEFKDFAGFDRELVESLQNDLDRMQLPGKIQLR 955

Query: 60   IQSAMPLLFSSARWPISCQP 1
            IQSAMP+L  S R  ISCQP
Sbjct: 956  IQSAMPILLPSVRCLISCQP 975


>ref|XP_002302587.2| CRYPTIC PRECOCIOUS family protein [Populus trichocarpa]
            gi|550345126|gb|EEE81860.2| CRYPTIC PRECOCIOUS family
            protein [Populus trichocarpa]
          Length = 2219

 Score =  234 bits (598), Expect = 2e-59
 Identities = 136/261 (52%), Positives = 170/261 (65%), Gaps = 5/261 (1%)
 Frame = -1

Query: 768  LVDLILPCLDQASDDSRSTFATDMIKQMNHIEQQINAVTREASKPAGTVASGIESPTTKS 589
            LV+L+LPC+DQ SDDSR+TFATD+IKQ+N+IEQQIN+VTR  SK  GT +SG+E P  KS
Sbjct: 1844 LVELVLPCIDQGSDDSRNTFATDLIKQLNNIEQQINSVTRGTSKQTGTASSGLEGPANKS 1903

Query: 588  -SRKGTRGSSPGLARRAAGPAETIXXXXXXXXXXXXLRLQFILRLFPIIYADREPSARNM 412
             +RKG RG SPGLARR A  A++             LRLQ +LRL P I  + EPS RNM
Sbjct: 1904 NNRKGIRGGSPGLARRTAAAADSTLPSPAALRASMLLRLQLLLRLLPTICTNGEPSGRNM 1963

Query: 411  RYMLASVILRILGSRVVHEDASHSFN--QAYSSKREVDSLVEASATASVVMSFESLFDRX 238
            R++LASVILR+LGSRVVHEDA  SF   Q++ SK E++S +EA   AS  +S ESLFDR 
Sbjct: 1964 RHVLASVILRLLGSRVVHEDAELSFYPLQSFQSKGELESPLEA---ASADLSGESLFDRL 2020

Query: 237  XXXXXXXXXXHQPCWL--XXXXXXXXXXXXXXXXSAFEREAAENLQNELDRMQLPETVRW 64
                       +P WL                  + F+R+  E+LQN+LDRM+LP T R 
Sbjct: 2021 LLVLHGLLSSSRPSWLKPRPASSSKSVNESSKDCAGFDRDLVESLQNDLDRMKLPGTTRL 2080

Query: 63   RIQSAMPLLFSSARWPISCQP 1
            RIQ+AMP+L  S R  +SCQP
Sbjct: 2081 RIQAAMPILLPSVRCFVSCQP 2101


>ref|XP_004155825.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            12-like [Cucumis sativus]
          Length = 2254

 Score =  224 bits (571), Expect = 2e-56
 Identities = 126/258 (48%), Positives = 163/258 (63%), Gaps = 2/258 (0%)
 Frame = -1

Query: 768  LVDLILPCLDQASDDSRSTFATDMIKQMNHIEQQINAVTREASKPAGTVASGIESPTTKS 589
            L++L+LPC+DQ+S++SR+TFA D+IKQ+N+IEQQINAVT   SK  G+V SGIE PT+K 
Sbjct: 1881 LIELVLPCIDQSSEESRNTFANDLIKQLNNIEQQINAVTSGTSKQTGSVPSGIEGPTSKG 1940

Query: 588  SRKGTRGSSPGLARRAAGPAETIXXXXXXXXXXXXLRLQFILRLFPIIYADREPSARNMR 409
            S +  +G SPG+ARR+ G  ++             LRLQ ILRL P+I  DREPS RNMR
Sbjct: 1941 SSRKMKGGSPGMARRSTGSTDSPLPSPAALRASMSLRLQLILRLLPVILEDREPSGRNMR 2000

Query: 408  YMLASVILRILGSRVVHEDASHSFNQAYS--SKREVDSLVEASATASVVMSFESLFDRXX 235
            +MLASVILR+LG+R+VHEDA+ +F   +S   K+EV+S  EAS  A   +  E LF R  
Sbjct: 2001 HMLASVILRLLGNRMVHEDANLTFCPTHSLMVKKEVESPSEASFAAFADLPGECLFGRML 2060

Query: 234  XXXXXXXXXHQPCWLXXXXXXXXXXXXXXXXSAFEREAAENLQNELDRMQLPETVRWRIQ 55
                      QP WL                S+  RE AE+LQNEL  MQLP+ +RWRIQ
Sbjct: 2061 LILHGLLSSCQPSWLGLKNAAKSTNETSKDSSSLVRELAESLQNELHCMQLPDMIRWRIQ 2120

Query: 54   SAMPLLFSSARWPISCQP 1
            +AMP+     R  +S QP
Sbjct: 2121 AAMPIPLPPGRCFLSYQP 2138


>ref|XP_004133865.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            12-like [Cucumis sativus]
          Length = 2254

 Score =  224 bits (571), Expect = 2e-56
 Identities = 126/258 (48%), Positives = 163/258 (63%), Gaps = 2/258 (0%)
 Frame = -1

Query: 768  LVDLILPCLDQASDDSRSTFATDMIKQMNHIEQQINAVTREASKPAGTVASGIESPTTKS 589
            L++L+LPC+DQ+S++SR+TFA D+IKQ+N+IEQQINAVT   SK  G+V SGIE PT+K 
Sbjct: 1881 LIELVLPCIDQSSEESRNTFANDLIKQLNNIEQQINAVTSGTSKQTGSVPSGIEGPTSKG 1940

Query: 588  SRKGTRGSSPGLARRAAGPAETIXXXXXXXXXXXXLRLQFILRLFPIIYADREPSARNMR 409
            S +  +G SPG+ARR+ G  ++             LRLQ ILRL P+I  DREPS RNMR
Sbjct: 1941 SSRKMKGGSPGMARRSTGSTDSPLPSPAALRASMSLRLQLILRLLPVILEDREPSGRNMR 2000

Query: 408  YMLASVILRILGSRVVHEDASHSFNQAYS--SKREVDSLVEASATASVVMSFESLFDRXX 235
            +MLASVILR+LG+R+VHEDA+ +F   +S   K+EV+S  EAS  A   +  E LF R  
Sbjct: 2001 HMLASVILRLLGNRMVHEDANLTFCPTHSLMVKKEVESPSEASFAAFADLPGECLFGRML 2060

Query: 234  XXXXXXXXXHQPCWLXXXXXXXXXXXXXXXXSAFEREAAENLQNELDRMQLPETVRWRIQ 55
                      QP WL                S+  RE AE+LQNEL  MQLP+ +RWRIQ
Sbjct: 2061 LILHGLLSSCQPSWLGLKNAAKSTNETSKDSSSLVRELAESLQNELHCMQLPDMIRWRIQ 2120

Query: 54   SAMPLLFSSARWPISCQP 1
            +AMP+     R  +S QP
Sbjct: 2121 AAMPIPLPPGRCFLSYQP 2138


>ref|XP_002511863.1| CRP, putative [Ricinus communis] gi|223549043|gb|EEF50532.1| CRP,
            putative [Ricinus communis]
          Length = 2264

 Score =  223 bits (568), Expect = 6e-56
 Identities = 129/258 (50%), Positives = 163/258 (63%), Gaps = 3/258 (1%)
 Frame = -1

Query: 768  LVDLILPCLDQASDDSRSTFATDMIKQMNHIEQQINAVTREASKPAGTVASGIESPTTK- 592
            L++L+LPC+DQ SD+SR+TFA+D+IKQ+N+IE  I A  R ASK  G+ +SG+E P  K 
Sbjct: 1898 LIELVLPCIDQGSDESRNTFASDLIKQLNNIELLIAA--RGASKQTGSASSGLEGPVNKG 1955

Query: 591  SSRKGTRGSSPGLARRAAGPAETIXXXXXXXXXXXXLRLQFILRLFPIIYADREPSARNM 412
            +SRK  RG SPG+ RR  G A++             LRLQ +LRL P+I  D EPS RNM
Sbjct: 1956 NSRKVIRGGSPGMNRRTTGAADSTLPSPAVLRTSMLLRLQLLLRLLPVICTDGEPSGRNM 2015

Query: 411  RYMLASVILRILGSRVVHEDASHSF--NQAYSSKREVDSLVEASATASVVMSFESLFDRX 238
            R+MLA VILR+LG+RVVHEDA  SF   ++  SK EV+S +E ++T S     ESLFDR 
Sbjct: 2016 RHMLACVILRLLGNRVVHEDADLSFYPMKSSQSKVEVESTLEVASTDS---PGESLFDRL 2072

Query: 237  XXXXXXXXXXHQPCWLXXXXXXXXXXXXXXXXSAFEREAAENLQNELDRMQLPETVRWRI 58
                       QP WL                S  +RE  E LQN+LDRMQLP ++RWRI
Sbjct: 2073 LLVLHGLLSSSQPSWLKSRSASKLMNEFSKDSSGIDRELVETLQNDLDRMQLPGSIRWRI 2132

Query: 57   QSAMPLLFSSARWPISCQ 4
            Q+AMP+L  SARW ISCQ
Sbjct: 2133 QAAMPVLLPSARWSISCQ 2150


>ref|XP_004510784.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            12-like [Cicer arietinum]
          Length = 2223

 Score =  220 bits (561), Expect = 4e-55
 Identities = 124/257 (48%), Positives = 166/257 (64%), Gaps = 1/257 (0%)
 Frame = -1

Query: 768  LVDLILPCLDQASDDSRSTFATDMIKQMNHIEQQINAVTREASKPAGTVASGIESPTTK- 592
            L++L+LPC+DQ+S++SR+TFA  ++KQ+++IE QI+AVT   SKP G+   G+E  TTK 
Sbjct: 1862 LIELLLPCMDQSSEESRNTFANCLMKQLSNIELQISAVTG-GSKPVGSNPPGVEGQTTKV 1920

Query: 591  SSRKGTRGSSPGLARRAAGPAETIXXXXXXXXXXXXLRLQFILRLFPIIYADREPSARNM 412
            ++RK  RG SPGLARR     ++             LRLQ ++R FPI+ ADREPS RNM
Sbjct: 1921 NTRKSLRGGSPGLARRPTVVTDSSPPSPAALRVSMSLRLQLLMRFFPILCADREPSVRNM 1980

Query: 411  RYMLASVILRILGSRVVHEDASHSFNQAYSSKREVDSLVEASATASVVMSFESLFDRXXX 232
            R+ LA VILR+LGSRVVHEDA+   N A  SK++++S  EA++ A V  S E LFDR   
Sbjct: 1981 RHFLAPVILRLLGSRVVHEDANILTN-AVHSKKDLESSSEAASAAFVDFSAEGLFDRLLL 2039

Query: 231  XXXXXXXXHQPCWLXXXXXXXXXXXXXXXXSAFEREAAENLQNELDRMQLPETVRWRIQS 52
                    + P WL                S F+RE  E+LQN++DRMQ+P+T+RWRIQ+
Sbjct: 2040 VLHGLLSSYPPSWLRLKPVSKSINEPMKESSGFDRELLESLQNDMDRMQVPDTIRWRIQA 2099

Query: 51   AMPLLFSSARWPISCQP 1
            AMP+LF S R   SCQP
Sbjct: 2100 AMPVLFPSIRCSFSCQP 2116


>ref|XP_006576321.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            12-like isoform X1 [Glycine max]
            gi|571443813|ref|XP_006576322.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 12-like isoform
            X2 [Glycine max]
          Length = 2227

 Score =  209 bits (532), Expect = 8e-52
 Identities = 120/258 (46%), Positives = 156/258 (60%), Gaps = 2/258 (0%)
 Frame = -1

Query: 768  LVDLILPCLDQASDDSRSTFATDMIKQMNHIEQQINAVTREASKPAGTVASGIES-PTTK 592
            L++L+LPC+DQ+SD+SR++FA+DM+KQ+++IEQQI AVT   SKP G+   G+E  P   
Sbjct: 1860 LIELLLPCIDQSSDESRNSFASDMMKQLSYIEQQITAVTG-GSKPVGSAPPGVEGQPNKV 1918

Query: 591  SSRKGTRGSSPGLARRAAGPAETIXXXXXXXXXXXXLRLQFILRLFPIIYADREPSARNM 412
            ++RK  RG  P LARR    A++             LRLQ +LR  PI+  DREPS R+M
Sbjct: 1919 NNRKNMRGGGPALARRQTVAADSSPPSPAALRASMSLRLQLLLRFLPILCTDREPSVRSM 1978

Query: 411  RYMLASVILRILGSRVVHEDASHSFNQA-YSSKREVDSLVEASATASVVMSFESLFDRXX 235
            R  LA+VI R+LGSRVVHEDA  S N   +   RE +S  E ++ A V  S  SLFDR  
Sbjct: 1979 RQFLATVIFRLLGSRVVHEDADISVNAVPFLPIREAESSSEVASAAFVDSSSGSLFDRLL 2038

Query: 234  XXXXXXXXXHQPCWLXXXXXXXXXXXXXXXXSAFEREAAENLQNELDRMQLPETVRWRIQ 55
                     + P WL                S  +RE  E LQN+LDRMQLP+T+RWRIQ
Sbjct: 2039 LVLHGLLSSYPPSWLRAKPVSKTISEPTREISGIDRELLEALQNDLDRMQLPDTIRWRIQ 2098

Query: 54   SAMPLLFSSARWPISCQP 1
            +AMP+L  S R  +SCQP
Sbjct: 2099 AAMPMLIPSMRCSLSCQP 2116


>ref|XP_006827602.1| hypothetical protein AMTR_s00009p00238900 [Amborella trichopoda]
            gi|548832222|gb|ERM95018.1| hypothetical protein
            AMTR_s00009p00238900 [Amborella trichopoda]
          Length = 2276

 Score =  206 bits (525), Expect = 5e-51
 Identities = 125/261 (47%), Positives = 160/261 (61%), Gaps = 5/261 (1%)
 Frame = -1

Query: 768  LVDLILPCLDQASDDSRSTFATDMIKQMNHIEQQINAVTREASKPAGTVASGIESPTTKS 589
            L DL+LPCLD++S+DSR+TFA+D+IKQ+N+IEQQI+  TR + K A   ASG E    K 
Sbjct: 1900 LADLVLPCLDRSSNDSRNTFASDLIKQLNNIEQQISLFTRVSGKQAAAAASGGEGSGNKG 1959

Query: 588  -SRKGTRGSSPGLARRAAGPAETIXXXXXXXXXXXXLRLQFILRLFPIIYADREPSARNM 412
             +RKG RG SPGLARR  G +E+             LRLQ +LRL PIIYADR+PS RNM
Sbjct: 1960 GARKGIRGGSPGLARRITGASESAPPSPSALQASMWLRLQLLLRLLPIIYADRDPSNRNM 2019

Query: 411  RYMLASVILRILGSRVVHEDASHSF---NQAYSSKREVDSLVEASATASVV-MSFESLFD 244
            R++L SV+LR+LGSRVVHED+   F    +   SKRE DS +EA   AS   +S +SLFD
Sbjct: 2020 RHILTSVLLRLLGSRVVHEDSDLPFAPLPKYPQSKREPDSSLEAPLGASSFGLSGDSLFD 2079

Query: 243  RXXXXXXXXXXXHQPCWLXXXXXXXXXXXXXXXXSAFEREAAENLQNELDRMQLPETVRW 64
            R           ++P WL                  F+RE  E +Q ELD MQLP T+R 
Sbjct: 2080 RFLCVLHGLLSSYRPSWL-KTKCSKLSAKSSRDFIPFDRELVERMQVELDHMQLPPTIRL 2138

Query: 63   RIQSAMPLLFSSARWPISCQP 1
            R+Q+AMP+L  +  +  S QP
Sbjct: 2139 RLQAAMPILPPTQPFSFSSQP 2159