BLASTX nr result
ID: Atropa21_contig00005468
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00005468
(876 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006353661.1| PREDICTED: CHD3-type chromatin-remodeling fa... 224 2e-86
ref|XP_004244891.1| PREDICTED: CHD3-type chromatin-remodeling fa... 92 4e-36
ref|XP_006343513.1| PREDICTED: CHD3-type chromatin-remodeling fa... 94 9e-36
ref|XP_004241797.1| PREDICTED: CHD3-type chromatin-remodeling fa... 155 2e-35
ref|XP_002282918.2| PREDICTED: CHD3-type chromatin-remodeling fa... 47 3e-10
emb|CAN81391.1| hypothetical protein VITISV_043255 [Vitis vinifera] 47 4e-10
emb|CBI21082.3| unnamed protein product [Vitis vinifera] 45 8e-08
ref|XP_006483455.1| PREDICTED: CHD3-type chromatin-remodeling fa... 59 2e-06
ref|XP_006450306.1| hypothetical protein CICLE_v10010331mg [Citr... 59 2e-06
>ref|XP_006353661.1| PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like [Solanum
tuberosum]
Length = 1473
Score = 224 bits (572), Expect(2) = 2e-86
Identities = 114/147 (77%), Positives = 123/147 (83%)
Frame = -1
Query: 669 VASQLAGLPMKKNLLPLEAFFQEMKRVLSSAHQNPSSFPRRELQEDWKAEGGNPSPEASF 490
VASQ A L +K+NLLPLEAFFQEMKRVLSSAHQNP + PR ELQEDWK EGG PSP SF
Sbjct: 1330 VASQPASLALKRNLLPLEAFFQEMKRVLSSAHQNPGNVPRSELQEDWKPEGGKPSPVPSF 1389
Query: 489 LADSRLHRADEEHDNFPTGTESGSVSTSNLTAPSTTESNIPHNISPSEVPGREIKYRSLN 310
L D LH A+E+HDNFPTGTE S TSNL STTESN+PHNISPSE+PG EI + SLN
Sbjct: 1390 LRDGNLHSAEEKHDNFPTGTEFVSEGTSNL---STTESNMPHNISPSEIPGEEIIHCSLN 1446
Query: 309 GDTDIEMVEKQDDTDVSTINVAMDITE 229
GDTDIEMVEKQDDTDVST+NVAMDITE
Sbjct: 1447 GDTDIEMVEKQDDTDVSTVNVAMDITE 1473
Score = 122 bits (306), Expect(2) = 2e-86
Identities = 60/73 (82%), Positives = 62/73 (84%)
Frame = -3
Query: 871 GKSHELPGKEMECDTKIVDESSRGIEAAGTEMADNFPKLNEISPQGISEVACDGEVDRLS 692
GK HELPGKEMECDTKIVDE SR +EAAGTEM DNFPKL ISPQGISE+ACDGEVDRLS
Sbjct: 1248 GKPHELPGKEMECDTKIVDEPSRSVEAAGTEMVDNFPKLIAISPQGISEIACDGEVDRLS 1307
Query: 691 VAQHYNKSSKSAS 653
VAQ YNK K S
Sbjct: 1308 VAQLYNKMCKVLS 1320
>ref|XP_004244891.1| PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like [Solanum
lycopersicum]
Length = 1463
Score = 92.0 bits (227), Expect(2) = 4e-36
Identities = 48/86 (55%), Positives = 59/86 (68%), Gaps = 4/86 (4%)
Frame = -3
Query: 868 KSHELPGKEMECDTKIVDESSRGIEAAGTEMADNFPKLNEISPQGISEVACDGEVDRLSV 689
KSHELP + M CDTK+VDE +R +E A TEM D+ P+L ISPQGIS+VACD + DRLSV
Sbjct: 1254 KSHELPNEGMACDTKVVDEPNRNVEEANTEMTDHSPRLVAISPQGISQVACDSKPDRLSV 1313
Query: 688 AQHYNKS----SKSASWSADEKEPPS 623
A+ YNK S + S +E P S
Sbjct: 1314 AELYNKMCLVLSGNVQDSFNESHPSS 1339
Score = 87.0 bits (214), Expect(2) = 4e-36
Identities = 56/132 (42%), Positives = 77/132 (58%), Gaps = 1/132 (0%)
Frame = -1
Query: 642 MKKNLLPLEAFFQEMKRVLSSAHQNPSSFPRRELQEDWKAEGGNPS-PEASFLADSRLHR 466
MKKN+LPLEA Q+M ++LSS QN +F R+ +QED +E S P S D R+
Sbjct: 1341 MKKNILPLEAICQQMNQILSSPQQNTPNFGRKLVQEDRNSEASKSSYPVPSSQVDDRVLN 1400
Query: 465 ADEEHDNFPTGTESGSVSTSNLTAPSTTESNIPHNISPSEVPGREIKYRSLNGDTDIEMV 286
A++EHD+ ESGS S S+ T S TE++ HN++P+ + R + GD DIEMV
Sbjct: 1401 AEKEHDSVLKKPESGSKSASSCTVASMTENH--HNVTPAVLETRPSS--TSTGDDDIEMV 1456
Query: 285 EKQDDTDVSTIN 250
D+ST N
Sbjct: 1457 ------DISTSN 1462
>ref|XP_006343513.1| PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like [Solanum
tuberosum]
Length = 1466
Score = 93.6 bits (231), Expect(2) = 9e-36
Identities = 44/66 (66%), Positives = 53/66 (80%)
Frame = -3
Query: 868 KSHELPGKEMECDTKIVDESSRGIEAAGTEMADNFPKLNEISPQGISEVACDGEVDRLSV 689
KSHELP + M CDTK+VDE +R +E A TEM D+ P+L ISPQGIS+VACDG+ DRLSV
Sbjct: 1258 KSHELPNEGMVCDTKVVDEPNRNVEEANTEMTDHSPRLVAISPQGISQVACDGKPDRLSV 1317
Query: 688 AQHYNK 671
A+ YNK
Sbjct: 1318 AELYNK 1323
Score = 84.3 bits (207), Expect(2) = 9e-36
Identities = 54/132 (40%), Positives = 76/132 (57%), Gaps = 1/132 (0%)
Frame = -1
Query: 642 MKKNLLPLEAFFQEMKRVLSSAHQNPSSFPRRELQEDWKAEGGNPS-PEASFLADSRLHR 466
M+KN++PLEA Q+M ++LSS QN +F R+ +QED +E S P S D R+
Sbjct: 1345 MRKNIVPLEAICQQMNQILSSPQQNTPNFERKLVQEDRNSEASKSSYPVPSSQVDDRVLN 1404
Query: 465 ADEEHDNFPTGTESGSVSTSNLTAPSTTESNIPHNISPSEVPGREIKYRSLNGDTDIEMV 286
A++EHD+ ESGS S S+ T S TE+ HN++P+ + R + GD DIEMV
Sbjct: 1405 AEKEHDSVLKKPESGSKSASSCTVGSMTEN---HNVTPAVLETRPSSIST--GDADIEMV 1459
Query: 285 EKQDDTDVSTIN 250
D+ST N
Sbjct: 1460 ------DISTSN 1465
>ref|XP_004241797.1| PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like [Solanum
lycopersicum]
Length = 1442
Score = 155 bits (391), Expect = 2e-35
Identities = 90/147 (61%), Positives = 96/147 (65%)
Frame = -1
Query: 669 VASQLAGLPMKKNLLPLEAFFQEMKRVLSSAHQNPSSFPRRELQEDWKAEGGNPSPEASF 490
VASQ A L +K+NLLPLEAFFQEMKRVLSSAHQNP + P ELQEDWK
Sbjct: 1327 VASQPASLALKRNLLPLEAFFQEMKRVLSSAHQNPGNAPGSELQEDWK------------ 1374
Query: 489 LADSRLHRADEEHDNFPTGTESGSVSTSNLTAPSTTESNIPHNISPSEVPGREIKYRSLN 310
P GTE S TSNL TTESNI H+ISPSE+PG EIK+ SLN
Sbjct: 1375 ----------------PEGTEFVSEGTSNLR---TTESNISHDISPSEIPGEEIKHCSLN 1415
Query: 309 GDTDIEMVEKQDDTDVSTINVAMDITE 229
GDTDIEMVEKQDDT VST NV MDI E
Sbjct: 1416 GDTDIEMVEKQDDTYVSTTNVVMDIAE 1442
Score = 119 bits (297), Expect = 2e-24
Identities = 60/78 (76%), Positives = 64/78 (82%)
Frame = -3
Query: 871 GKSHELPGKEMECDTKIVDESSRGIEAAGTEMADNFPKLNEISPQGISEVACDGEVDRLS 692
GK HELPGKEME DTKIVDE SR +EAAGTEM DNFPKL ISPQGISE+ACDGEVDRLS
Sbjct: 1245 GKPHELPGKEMERDTKIVDELSRSVEAAGTEMVDNFPKLIAISPQGISEIACDGEVDRLS 1304
Query: 691 VAQHYNKSSKSASWSADE 638
VAQ YNK K S S ++
Sbjct: 1305 VAQLYNKMCKVLSDSGED 1322
>ref|XP_002282918.2| PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like [Vitis
vinifera]
Length = 1472
Score = 47.0 bits (110), Expect(2) = 3e-10
Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 22/164 (13%)
Frame = -1
Query: 684 SITIRVASQLAGLPMKKNLLPLEAFFQEMKRVLSSAHQNPSSFP-------RRELQEDWK 526
S+ +A+Q A L ++K LLPLEA +++ R+LS QNP++ ++ L E
Sbjct: 1302 SVQSYLANQPASLQLRKKLLPLEAICEDINRILSPQLQNPATSEQTLLGSNQQSLAEAPT 1361
Query: 525 AEGGNPSPEASFLADSR------------LHRADEEHDNFPTGTESGS---VSTSNLTAP 391
+ G+ SP D R L ++D D+ T+S S S S P
Sbjct: 1362 SVAGSSSPSIQQQDDQRPSAEQDTEMRDALTKSDPRKDS-SQSTKSDSEKESSKSPCDVP 1420
Query: 390 STTESNIPHNISPSEVPGREIKYRSLNGDTDIEMVEKQDDTDVS 259
++ +S+ P + P+ VP D+EM EK+++ D +
Sbjct: 1421 TSADSHSP-QVEPTCVPA--------GTGEDVEMEEKKNEADAA 1455
Score = 45.1 bits (105), Expect(2) = 3e-10
Identities = 21/69 (30%), Positives = 39/69 (56%)
Frame = -3
Query: 868 KSHELPGKEMECDTKIVDESSRGIEAAGTEMADNFPKLNEISPQGISEVACDGEVDRLSV 689
KS+E+ ++ E + K++D SS ++ D P++ I+ + IS ACD + +R +
Sbjct: 1225 KSNEIASEDPENEAKVIDISSPSNVEVDAQIMDQLPRIEVIASEEISATACDDKPERAEM 1284
Query: 688 AQHYNKSSK 662
A+ YN+ K
Sbjct: 1285 ARLYNEMCK 1293
>emb|CAN81391.1| hypothetical protein VITISV_043255 [Vitis vinifera]
Length = 755
Score = 46.6 bits (109), Expect(2) = 4e-10
Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 22/164 (13%)
Frame = -1
Query: 684 SITIRVASQLAGLPMKKNLLPLEAFFQEMKRVLSSAHQNPSSFP-------RRELQEDWK 526
S+ +A+Q A L ++K LLPLEA +++ R+LS QNP++ ++ L E
Sbjct: 585 SVQSYLANQPASLQLRKKLLPLEAICEDINRILSPQLQNPATSEQTLLGSNQQSLAEAPT 644
Query: 525 AEGGNPSPEASFLADSR------------LHRADEEHDNFPTGTESGS---VSTSNLTAP 391
+ G+ SP D R L ++D D+ T+S S S S P
Sbjct: 645 SVAGSSSPSIQQQDDQRPSAEQDTEMRDALIKSDPRKDS-SQSTKSDSEKESSKSPCDVP 703
Query: 390 STTESNIPHNISPSEVPGREIKYRSLNGDTDIEMVEKQDDTDVS 259
++ +S+ P + P+ VP D+EM EK+++ D +
Sbjct: 704 TSADSHSP-QVEPTCVPA--------GTGEDVEMEEKKNEADAA 738
Score = 45.1 bits (105), Expect(2) = 4e-10
Identities = 21/69 (30%), Positives = 39/69 (56%)
Frame = -3
Query: 868 KSHELPGKEMECDTKIVDESSRGIEAAGTEMADNFPKLNEISPQGISEVACDGEVDRLSV 689
KS+E+ ++ E + K++D SS ++ D P++ I+ + IS ACD + +R +
Sbjct: 508 KSNEIASEDPENEAKVIDISSPSNVEVDAQIMDQLPRIEVIASEEISATACDDKPERAEM 567
Query: 688 AQHYNKSSK 662
A+ YN+ K
Sbjct: 568 ARLYNEMCK 576
>emb|CBI21082.3| unnamed protein product [Vitis vinifera]
Length = 1356
Score = 45.1 bits (105), Expect(2) = 8e-08
Identities = 21/69 (30%), Positives = 39/69 (56%)
Frame = -3
Query: 868 KSHELPGKEMECDTKIVDESSRGIEAAGTEMADNFPKLNEISPQGISEVACDGEVDRLSV 689
KS+E+ ++ E + K++D SS ++ D P++ I+ + IS ACD + +R +
Sbjct: 1225 KSNEIASEDPENEAKVIDISSPSNVEVDAQIMDQLPRIEVIASEEISATACDDKPERAEM 1284
Query: 688 AQHYNKSSK 662
A+ YN+ K
Sbjct: 1285 ARLYNEMCK 1293
Score = 38.5 bits (88), Expect(2) = 8e-08
Identities = 18/42 (42%), Positives = 29/42 (69%)
Frame = -1
Query: 684 SITIRVASQLAGLPMKKNLLPLEAFFQEMKRVLSSAHQNPSS 559
S+ +A+Q A L ++K LLPLEA +++ R+LS QNP++
Sbjct: 1302 SVQSYLANQPASLQLRKKLLPLEAICEDINRILSPQLQNPAT 1343
>ref|XP_006483455.1| PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like isoform
X1 [Citrus sinensis] gi|568859871|ref|XP_006483456.1|
PREDICTED: CHD3-type chromatin-remodeling factor
PICKLE-like isoform X2 [Citrus sinensis]
Length = 1462
Score = 59.3 bits (142), Expect = 2e-06
Identities = 28/69 (40%), Positives = 40/69 (57%)
Frame = -3
Query: 868 KSHELPGKEMECDTKIVDESSRGIEAAGTEMADNFPKLNEISPQGISEVACDGEVDRLSV 689
KS+E+P +E E + K + S ++M D PKL I+ + IS ACD + DRL +
Sbjct: 1225 KSNEIPSEEPESERKTTERPSPTSMEIDSQMVDQLPKLEAITSEEISAAACDSDADRLGL 1284
Query: 688 AQHYNKSSK 662
AQHYN+ K
Sbjct: 1285 AQHYNEMCK 1293
>ref|XP_006450306.1| hypothetical protein CICLE_v10010331mg [Citrus clementina]
gi|557553532|gb|ESR63546.1| hypothetical protein
CICLE_v10010331mg [Citrus clementina]
Length = 1448
Score = 59.3 bits (142), Expect = 2e-06
Identities = 28/69 (40%), Positives = 40/69 (57%)
Frame = -3
Query: 868 KSHELPGKEMECDTKIVDESSRGIEAAGTEMADNFPKLNEISPQGISEVACDGEVDRLSV 689
KS+E+P +E E + K + S ++M D PKL I+ + IS ACD + DRL +
Sbjct: 1211 KSNEIPSEEPESERKTTERPSPTSMEIDSQMVDQLPKLEAITSEEISAAACDSDADRLGL 1270
Query: 688 AQHYNKSSK 662
AQHYN+ K
Sbjct: 1271 AQHYNEMCK 1279