BLASTX nr result

ID: Atropa21_contig00005439 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00005439
         (1548 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004242406.1| PREDICTED: putative SERF-like protein-like [...    69   7e-09
ref|XP_006414978.1| hypothetical protein EUTSA_v10026728mg [Eutr...    59   7e-06
ref|XP_006285111.1| hypothetical protein CARUB_v10006444mg [Caps...    59   7e-06

>ref|XP_004242406.1| PREDICTED: putative SERF-like protein-like [Solanum lycopersicum]
          Length = 71

 Score = 68.6 bits (166), Expect = 7e-09
 Identities = 36/69 (52%), Positives = 38/69 (55%)
 Frame = +2

Query: 1133 RGNXXXXXXXXXXXXGNHKPKNPKNDGLTPEQRRERDXXXXXXXXXXXXXQVAGGGNIDK 1312
            RGN            GNHK K PKNDGLTPEQRRERD             Q   G NI+K
Sbjct: 3    RGNQRDRDRERAQARGNHKSKTPKNDGLTPEQRRERDAKALQEKAKKKAAQAEDGWNINK 62

Query: 1313 SESYNIKKK 1339
            SES+NIKKK
Sbjct: 63   SESHNIKKK 71


>ref|XP_006414978.1| hypothetical protein EUTSA_v10026728mg [Eutrema salsugineum]
            gi|557116148|gb|ESQ56431.1| hypothetical protein
            EUTSA_v10026728mg [Eutrema salsugineum]
          Length = 72

 Score = 58.5 bits (140), Expect = 7e-06
 Identities = 30/59 (50%), Positives = 30/59 (50%)
 Frame = +2

Query: 1133 RGNXXXXXXXXXXXXGNHKPKNPKNDGLTPEQRRERDXXXXXXXXXXXXXQVAGGGNID 1309
            RGN            GNHKPK PKNDGLTPEQRRERD             Q  GGGN D
Sbjct: 3    RGNQRERDRERAQARGNHKPKQPKNDGLTPEQRRERDARALQEKAARKAGQSMGGGNHD 61


>ref|XP_006285111.1| hypothetical protein CARUB_v10006444mg [Capsella rubella]
            gi|482553816|gb|EOA18009.1| hypothetical protein
            CARUB_v10006444mg [Capsella rubella]
          Length = 134

 Score = 58.5 bits (140), Expect = 7e-06
 Identities = 30/59 (50%), Positives = 30/59 (50%)
 Frame = +2

Query: 1133 RGNXXXXXXXXXXXXGNHKPKNPKNDGLTPEQRRERDXXXXXXXXXXXXXQVAGGGNID 1309
            RGN            GNHKPK PKNDGLTPEQRRERD             Q  GGGN D
Sbjct: 65   RGNQRERDRERAQARGNHKPKQPKNDGLTPEQRRERDARALQEKAARKAGQSMGGGNHD 123


Top