BLASTX nr result

ID: Atropa21_contig00005237 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00005237
         (498 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001233985.1| histone H1 [Solanum lycopersicum] gi|3021487...   111   1e-22
ref|XP_006352751.1| PREDICTED: histone H1-like [Solanum tuberosum]    110   3e-22
gb|AAC41651.1| histone H1 [Nicotiana tabacum]                         107   1e-21
dbj|BAA88671.1| histone H1 [Nicotiana tabacum]                        107   1e-21
ref|XP_004247225.1| PREDICTED: histone H1-like [Solanum lycopers...    99   8e-19
sp|Q9M5W4.1|H1_EUPES RecName: Full=Histone H1 gi|6752901|gb|AAF2...    98   1e-18
ref|XP_006351636.1| PREDICTED: histone H1-like [Solanum tuberosum]     98   1e-18
ref|XP_006352120.1| PREDICTED: histone H1-like [Solanum tuberosum]     97   3e-18
gb|EOY11039.1| Winged-helix DNA-binding transcription factor fam...    97   3e-18
ref|XP_004140078.1| PREDICTED: histone H1.2-like [Cucumis sativu...    96   5e-18
gb|AFI74270.1| linker histone H1 [Musa acuminata AAA Group]            96   5e-18
gb|AAP31307.1| histone H1 [Lens nigricans]                             96   5e-18
gb|AAM54670.1|AF514416_1 histone H1 [Lathyrus aphaca]                  96   5e-18
gb|AAM54671.1|AF514417_1 histone H1 [Pisum abyssinicum] gi|21465...    96   5e-18
gb|AAK29456.1|AF352253_1 histone H1 [Lens culinaris]                   96   5e-18
gb|AAK29449.1|AF352246_1 histone H1 [Pisum sativum]                    96   5e-18
gb|AAK29450.1|AF352247_1 histone H1 [Pisum sativum]                    96   5e-18
gb|AAK29455.1|AF352252_1 histone H1 [Lens culinaris]                   96   5e-18
gb|AAK29454.1|AF352251_1 histone H1 [Lens culinaris]                   96   5e-18
gb|ABB59463.1| histone H1F [Nicotiana tabacum] gi|86991342|gb|AB...    96   7e-18

>ref|NP_001233985.1| histone H1 [Solanum lycopersicum] gi|3021487|emb|CAA12232.1|
           histone H1 [Solanum lycopersicum]
          Length = 271

 Score =  111 bits (277), Expect = 1e-22
 Identities = 56/62 (90%), Positives = 60/62 (96%)
 Frame = -3

Query: 496 YFEMIQEAIVTLKDRTGSSQYAIQKFIEDKQKHLPSNFRKLLLGQLKKLVASGKLVKVKS 317
           YFEMI+EAIVTLKD+TGSSQYAI KFIEDKQK+LPSNFRK+LL QLKKLVASGKLVKVKS
Sbjct: 60  YFEMIKEAIVTLKDKTGSSQYAITKFIEDKQKNLPSNFRKMLLAQLKKLVASGKLVKVKS 119

Query: 316 SY 311
           SY
Sbjct: 120 SY 121


>ref|XP_006352751.1| PREDICTED: histone H1-like [Solanum tuberosum]
          Length = 273

 Score =  110 bits (274), Expect = 3e-22
 Identities = 56/62 (90%), Positives = 60/62 (96%)
 Frame = -3

Query: 496 YFEMIQEAIVTLKDRTGSSQYAIQKFIEDKQKHLPSNFRKLLLGQLKKLVASGKLVKVKS 317
           YFEMI+EAIVTLKD+TGSSQYAI KFIEDKQK+LPSNFRK+LL QLKKLVASGKLVKVKS
Sbjct: 60  YFEMIKEAIVTLKDKTGSSQYAITKFIEDKQKNLPSNFRKMLLVQLKKLVASGKLVKVKS 119

Query: 316 SY 311
           SY
Sbjct: 120 SY 121


>gb|AAC41651.1| histone H1 [Nicotiana tabacum]
          Length = 282

 Score =  107 bits (268), Expect = 1e-21
 Identities = 55/62 (88%), Positives = 60/62 (96%)
 Frame = -3

Query: 496 YFEMIQEAIVTLKDRTGSSQYAIQKFIEDKQKHLPSNFRKLLLGQLKKLVASGKLVKVKS 317
           YFEMI++AIVTLKD+TGSSQ+AI KFIEDKQK+LPSNFRKLLL QLKKLVASGKLVKVKS
Sbjct: 62  YFEMIKDAIVTLKDKTGSSQHAITKFIEDKQKNLPSNFRKLLLVQLKKLVASGKLVKVKS 121

Query: 316 SY 311
           SY
Sbjct: 122 SY 123


>dbj|BAA88671.1| histone H1 [Nicotiana tabacum]
          Length = 279

 Score =  107 bits (268), Expect = 1e-21
 Identities = 55/62 (88%), Positives = 60/62 (96%)
 Frame = -3

Query: 496 YFEMIQEAIVTLKDRTGSSQYAIQKFIEDKQKHLPSNFRKLLLGQLKKLVASGKLVKVKS 317
           YFEMI++AIVTLKD+TGSSQ+AI KFIEDKQK+LPSNFRKLLL QLKKLVASGKLVKVKS
Sbjct: 62  YFEMIKDAIVTLKDKTGSSQHAITKFIEDKQKNLPSNFRKLLLVQLKKLVASGKLVKVKS 121

Query: 316 SY 311
           SY
Sbjct: 122 SY 123


>ref|XP_004247225.1| PREDICTED: histone H1-like [Solanum lycopersicum]
           gi|585241|sp|P37218.1|H1_SOLLC RecName: Full=Histone H1
           gi|424100|gb|AAA50578.1| histone H1 [Solanum
           lycopersicum]
          Length = 287

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 50/62 (80%), Positives = 57/62 (91%)
 Frame = -3

Query: 496 YFEMIQEAIVTLKDRTGSSQYAIQKFIEDKQKHLPSNFRKLLLGQLKKLVASGKLVKVKS 317
           YFEMI++AIVTLK+RTGSSQ+AI KFIE+KQK LPSNF+KLLL QLKK VAS KLVKVK+
Sbjct: 59  YFEMIKDAIVTLKERTGSSQHAITKFIEEKQKSLPSNFKKLLLTQLKKFVASEKLVKVKN 118

Query: 316 SY 311
           SY
Sbjct: 119 SY 120


>sp|Q9M5W4.1|H1_EUPES RecName: Full=Histone H1 gi|6752901|gb|AAF27930.1|AF222804_1
           histone H1 [Euphorbia esula]
          Length = 229

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 49/62 (79%), Positives = 55/62 (88%)
 Frame = -3

Query: 496 YFEMIQEAIVTLKDRTGSSQYAIQKFIEDKQKHLPSNFRKLLLGQLKKLVASGKLVKVKS 317
           +FEMI +AI TLK+RTGSSQYAI KF+EDK K LPSNFRKLLL  LKKLVASGKLVKVK+
Sbjct: 54  FFEMISDAISTLKERTGSSQYAINKFVEDKHKQLPSNFRKLLLFHLKKLVASGKLVKVKN 113

Query: 316 SY 311
           S+
Sbjct: 114 SF 115


>ref|XP_006351636.1| PREDICTED: histone H1-like [Solanum tuberosum]
          Length = 283

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 50/62 (80%), Positives = 57/62 (91%)
 Frame = -3

Query: 496 YFEMIQEAIVTLKDRTGSSQYAIQKFIEDKQKHLPSNFRKLLLGQLKKLVASGKLVKVKS 317
           YFEMI++AIVTLK+RTGSSQYAI KFIE+KQK+LPSNF+K LL QLKK VAS KLVKVK+
Sbjct: 59  YFEMIKDAIVTLKERTGSSQYAITKFIEEKQKNLPSNFKKSLLIQLKKFVASEKLVKVKN 118

Query: 316 SY 311
           SY
Sbjct: 119 SY 120


>ref|XP_006352120.1| PREDICTED: histone H1-like [Solanum tuberosum]
          Length = 193

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 50/62 (80%), Positives = 54/62 (87%)
 Frame = -3

Query: 496 YFEMIQEAIVTLKDRTGSSQYAIQKFIEDKQKHLPSNFRKLLLGQLKKLVASGKLVKVKS 317
           Y EMI EAI TLK+RTGSSQ AI KFIE+KQK LPSNFRKLLL QLKKLVASGKL K+KS
Sbjct: 23  YVEMISEAITTLKERTGSSQVAIAKFIEEKQKGLPSNFRKLLLVQLKKLVASGKLTKIKS 82

Query: 316 SY 311
           S+
Sbjct: 83  SF 84


>gb|EOY11039.1| Winged-helix DNA-binding transcription factor family protein
           [Theobroma cacao]
          Length = 212

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 48/62 (77%), Positives = 55/62 (88%)
 Frame = -3

Query: 496 YFEMIQEAIVTLKDRTGSSQYAIQKFIEDKQKHLPSNFRKLLLGQLKKLVASGKLVKVKS 317
           + EMI +AIVTLK++TGSSQYAI KFIE+K K LPSNFRKLLL Q+KK VASGKLVKVK+
Sbjct: 32  FLEMISDAIVTLKEKTGSSQYAITKFIEEKHKQLPSNFRKLLLVQMKKFVASGKLVKVKA 91

Query: 316 SY 311
           SY
Sbjct: 92  SY 93


>ref|XP_004140078.1| PREDICTED: histone H1.2-like [Cucumis sativus]
           gi|449490449|ref|XP_004158609.1| PREDICTED: histone
           H1.2-like [Cucumis sativus]
          Length = 274

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 49/62 (79%), Positives = 55/62 (88%)
 Frame = -3

Query: 496 YFEMIQEAIVTLKDRTGSSQYAIQKFIEDKQKHLPSNFRKLLLGQLKKLVASGKLVKVKS 317
           Y EMI++AIVTLK+RTGSSQYAI KFIE+KQK LP NF+KLLL  LKKLV SGKLVKVKS
Sbjct: 59  YEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPPNFKKLLLFHLKKLVTSGKLVKVKS 118

Query: 316 SY 311
           S+
Sbjct: 119 SF 120


>gb|AFI74270.1| linker histone H1 [Musa acuminata AAA Group]
          Length = 315

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 49/63 (77%), Positives = 55/63 (87%), Gaps = 1/63 (1%)
 Frame = -3

Query: 496 YFEMIQEAIVTLKDRTGSSQYAIQKFIEDKQK-HLPSNFRKLLLGQLKKLVASGKLVKVK 320
           Y EMI EAIVTLK+RTGSSQYAI KF+EDK K HLP NFRK+LLGQLK+L A+GKL KVK
Sbjct: 76  YAEMIMEAIVTLKERTGSSQYAIGKFLEDKHKNHLPGNFRKILLGQLKRLTAAGKLKKVK 135

Query: 319 SSY 311
           +SY
Sbjct: 136 NSY 138


>gb|AAP31307.1| histone H1 [Lens nigricans]
          Length = 293

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 47/62 (75%), Positives = 57/62 (91%)
 Frame = -3

Query: 496 YFEMIQEAIVTLKDRTGSSQYAIQKFIEDKQKHLPSNFRKLLLGQLKKLVASGKLVKVKS 317
           Y EM+++AIV+LK++ GSSQYAI KFIE+KQK LPSNF+KLLL Q+KKLVASGKLVKVK+
Sbjct: 59  YEEMVKDAIVSLKEKNGSSQYAIAKFIEEKQKQLPSNFKKLLLVQIKKLVASGKLVKVKA 118

Query: 316 SY 311
           SY
Sbjct: 119 SY 120


>gb|AAM54670.1|AF514416_1 histone H1 [Lathyrus aphaca]
          Length = 298

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 48/62 (77%), Positives = 56/62 (90%)
 Frame = -3

Query: 496 YFEMIQEAIVTLKDRTGSSQYAIQKFIEDKQKHLPSNFRKLLLGQLKKLVASGKLVKVKS 317
           Y EM++EAIV LK+++GSSQYAI KFIE+K K LPSNF+KLLL QLKKLVASGKLVKVK+
Sbjct: 62  YEEMVKEAIVALKEKSGSSQYAIAKFIEEKHKQLPSNFKKLLLVQLKKLVASGKLVKVKA 121

Query: 316 SY 311
           SY
Sbjct: 122 SY 123


>gb|AAM54671.1|AF514417_1 histone H1 [Pisum abyssinicum] gi|21465097|gb|AAM54672.1|AF514418_1
           histone H1 [Pisum fulvum]
          Length = 295

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 48/62 (77%), Positives = 55/62 (88%)
 Frame = -3

Query: 496 YFEMIQEAIVTLKDRTGSSQYAIQKFIEDKQKHLPSNFRKLLLGQLKKLVASGKLVKVKS 317
           Y EM++EAIV LK+R GSSQYAI KFIE+K K LPSNF+KLLL Q+KKLVASGKLVKVK+
Sbjct: 59  YEEMVKEAIVALKERNGSSQYAIAKFIEEKHKQLPSNFKKLLLVQIKKLVASGKLVKVKA 118

Query: 316 SY 311
           SY
Sbjct: 119 SY 120


>gb|AAK29456.1|AF352253_1 histone H1 [Lens culinaris]
          Length = 293

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 47/62 (75%), Positives = 57/62 (91%)
 Frame = -3

Query: 496 YFEMIQEAIVTLKDRTGSSQYAIQKFIEDKQKHLPSNFRKLLLGQLKKLVASGKLVKVKS 317
           Y EM+++AIV+LK++ GSSQYAI KFIE+KQK LPSNF+KLLL Q+KKLVASGKLVKVK+
Sbjct: 59  YEEMVKDAIVSLKEKNGSSQYAIAKFIEEKQKQLPSNFKKLLLVQIKKLVASGKLVKVKA 118

Query: 316 SY 311
           SY
Sbjct: 119 SY 120


>gb|AAK29449.1|AF352246_1 histone H1 [Pisum sativum]
          Length = 296

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 48/62 (77%), Positives = 55/62 (88%)
 Frame = -3

Query: 496 YFEMIQEAIVTLKDRTGSSQYAIQKFIEDKQKHLPSNFRKLLLGQLKKLVASGKLVKVKS 317
           Y EM++EAIV LK+R GSSQYAI KFIE+K K LPSNF+KLLL Q+KKLVASGKLVKVK+
Sbjct: 59  YEEMVKEAIVALKERNGSSQYAIAKFIEEKHKQLPSNFKKLLLVQIKKLVASGKLVKVKA 118

Query: 316 SY 311
           SY
Sbjct: 119 SY 120


>gb|AAK29450.1|AF352247_1 histone H1 [Pisum sativum]
          Length = 290

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 48/62 (77%), Positives = 55/62 (88%)
 Frame = -3

Query: 496 YFEMIQEAIVTLKDRTGSSQYAIQKFIEDKQKHLPSNFRKLLLGQLKKLVASGKLVKVKS 317
           Y EM++EAIV LK+R GSSQYAI KFIE+K K LPSNF+KLLL Q+KKLVASGKLVKVK+
Sbjct: 59  YEEMVKEAIVALKERNGSSQYAIAKFIEEKHKQLPSNFKKLLLVQIKKLVASGKLVKVKA 118

Query: 316 SY 311
           SY
Sbjct: 119 SY 120


>gb|AAK29455.1|AF352252_1 histone H1 [Lens culinaris]
          Length = 293

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 47/62 (75%), Positives = 57/62 (91%)
 Frame = -3

Query: 496 YFEMIQEAIVTLKDRTGSSQYAIQKFIEDKQKHLPSNFRKLLLGQLKKLVASGKLVKVKS 317
           Y EM+++AIV+LK++ GSSQYAI KFIE+KQK LPSNF+KLLL Q+KKLVASGKLVKVK+
Sbjct: 59  YEEMVKDAIVSLKEKNGSSQYAIAKFIEEKQKQLPSNFKKLLLVQIKKLVASGKLVKVKA 118

Query: 316 SY 311
           SY
Sbjct: 119 SY 120


>gb|AAK29454.1|AF352251_1 histone H1 [Lens culinaris]
          Length = 281

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 47/62 (75%), Positives = 57/62 (91%)
 Frame = -3

Query: 496 YFEMIQEAIVTLKDRTGSSQYAIQKFIEDKQKHLPSNFRKLLLGQLKKLVASGKLVKVKS 317
           Y EM+++AIV+LK++ GSSQYAI KFIE+KQK LPSNF+KLLL Q+KKLVASGKLVKVK+
Sbjct: 59  YEEMVKDAIVSLKEKNGSSQYAIAKFIEEKQKQLPSNFKKLLLVQIKKLVASGKLVKVKA 118

Query: 316 SY 311
           SY
Sbjct: 119 SY 120


>gb|ABB59463.1| histone H1F [Nicotiana tabacum] gi|86991342|gb|ABD16132.1| histone
           H1f [Nicotiana tabacum]
          Length = 184

 Score = 95.5 bits (236), Expect = 7e-18
 Identities = 49/62 (79%), Positives = 54/62 (87%)
 Frame = -3

Query: 496 YFEMIQEAIVTLKDRTGSSQYAIQKFIEDKQKHLPSNFRKLLLGQLKKLVASGKLVKVKS 317
           Y EMI EAIV LK+RTGSSQ+AI KFIE+KQK LPSNFRKLLL QLKKLVASGKL K+K 
Sbjct: 21  YAEMISEAIVALKERTGSSQFAIAKFIEEKQKDLPSNFRKLLLVQLKKLVASGKLSKIKG 80

Query: 316 SY 311
           S+
Sbjct: 81  SF 82


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