BLASTX nr result
ID: Atropa21_contig00005182
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00005182
(697 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001241022.1| uncharacterized protein LOC100793233 [Glycin... 156 7e-36
ref|XP_004247417.1| PREDICTED: probable small nuclear ribonucleo... 155 9e-36
ref|XP_003630987.1| Small nuclear ribonucleoprotein-like protein... 155 9e-36
ref|XP_002302713.1| small nuclear ribonucleoprotein D2 [Populus ... 155 2e-35
ref|XP_006588396.1| PREDICTED: uncharacterized protein LOC100500... 154 2e-35
ref|NP_001238430.1| uncharacterized protein LOC100500203 [Glycin... 154 2e-35
ref|XP_006397961.1| hypothetical protein EUTSA_v10001688mg [Eutr... 153 6e-35
ref|NP_850477.1| small nuclear ribonucleoprotein D2 [Arabidopsis... 152 1e-34
gb|ACJ86019.1| unknown [Medicago truncatula] 151 2e-34
gb|ESW32455.1| hypothetical protein PHAVU_002G324000g [Phaseolus... 149 8e-34
gb|ESW03367.1| hypothetical protein PHAVU_011G008300g [Phaseolus... 149 8e-34
ref|XP_006397960.1| hypothetical protein EUTSA_v10001688mg [Eutr... 149 1e-33
ref|XP_006402336.1| hypothetical protein EUTSA_v10006266mg [Eutr... 148 1e-33
ref|XP_006402335.1| hypothetical protein EUTSA_v10006266mg [Eutr... 148 1e-33
gb|EMJ03100.1| hypothetical protein PRUPE_ppa013707mg [Prunus pe... 148 1e-33
gb|ABK21523.1| unknown [Picea sitchensis] 148 1e-33
ref|XP_004299438.1| PREDICTED: probable small nuclear ribonucleo... 148 2e-33
ref|XP_004146504.1| PREDICTED: probable small nuclear ribonucleo... 148 2e-33
ref|XP_003630988.1| Small nuclear ribonucleoprotein-like protein... 147 2e-33
ref|XP_002878480.1| predicted protein [Arabidopsis lyrata subsp.... 147 2e-33
>ref|NP_001241022.1| uncharacterized protein LOC100793233 [Glycine max]
gi|255633912|gb|ACU17317.1| unknown [Glycine max]
Length = 108
Score = 156 bits (394), Expect = 7e-36
Identities = 75/78 (96%), Positives = 76/78 (97%)
Frame = +1
Query: 142 MSRPMEEDAPGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLCRVRAFDRHCNMV 321
MSRPMEEDA GKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNN+KLL RVRAFDRHCNMV
Sbjct: 1 MSRPMEEDAAGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMV 60
Query: 322 LENVREMWTEVPKTGKGK 375
LENVREMWTEVPKTGKGK
Sbjct: 61 LENVREMWTEVPKTGKGK 78
>ref|XP_004247417.1| PREDICTED: probable small nuclear ribonucleoprotein Sm D2-like
[Solanum lycopersicum] gi|565387163|ref|XP_006359373.1|
PREDICTED: small nuclear ribonucleoprotein Sm D2-like
[Solanum tuberosum]
Length = 109
Score = 155 bits (393), Expect = 9e-36
Identities = 77/79 (97%), Positives = 77/79 (97%), Gaps = 1/79 (1%)
Frame = +1
Query: 142 MSRPMEEDAP-GKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLCRVRAFDRHCNM 318
MSRPMEEDAP GKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLL RVRAFDRHCNM
Sbjct: 1 MSRPMEEDAPQGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNM 60
Query: 319 VLENVREMWTEVPKTGKGK 375
VLENVREMWTEVPKTGKGK
Sbjct: 61 VLENVREMWTEVPKTGKGK 79
>ref|XP_003630987.1| Small nuclear ribonucleoprotein-like protein [Medicago truncatula]
gi|502138232|ref|XP_004503332.1| PREDICTED: small
nuclear ribonucleoprotein Sm D2-like isoform X1 [Cicer
arietinum] gi|502138235|ref|XP_004503333.1| PREDICTED:
small nuclear ribonucleoprotein Sm D2-like isoform X2
[Cicer arietinum] gi|355525009|gb|AET05463.1| Small
nuclear ribonucleoprotein-like protein [Medicago
truncatula] gi|388506390|gb|AFK41261.1| unknown
[Medicago truncatula]
Length = 108
Score = 155 bits (393), Expect = 9e-36
Identities = 75/78 (96%), Positives = 76/78 (97%)
Frame = +1
Query: 142 MSRPMEEDAPGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLCRVRAFDRHCNMV 321
MSRPMEEDA GKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNN+KLL RVRAFDRHCNMV
Sbjct: 1 MSRPMEEDAVGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMV 60
Query: 322 LENVREMWTEVPKTGKGK 375
LENVREMWTEVPKTGKGK
Sbjct: 61 LENVREMWTEVPKTGKGK 78
>ref|XP_002302713.1| small nuclear ribonucleoprotein D2 [Populus trichocarpa]
gi|224128478|ref|XP_002320342.1| small nuclear
ribonucleoprotein D2 [Populus trichocarpa]
gi|118481477|gb|ABK92681.1| unknown [Populus
trichocarpa] gi|222844439|gb|EEE81986.1| small nuclear
ribonucleoprotein D2 [Populus trichocarpa]
gi|222861115|gb|EEE98657.1| small nuclear
ribonucleoprotein D2 [Populus trichocarpa]
Length = 108
Score = 155 bits (391), Expect = 2e-35
Identities = 74/78 (94%), Positives = 76/78 (97%)
Frame = +1
Query: 142 MSRPMEEDAPGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLCRVRAFDRHCNMV 321
MSRPMEEDAP KNEEEEF+TGPLSVLMMSVKNNTQVLINCRNN+KLL RVRAFDRHCNMV
Sbjct: 1 MSRPMEEDAPSKNEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMV 60
Query: 322 LENVREMWTEVPKTGKGK 375
LENVREMWTEVPKTGKGK
Sbjct: 61 LENVREMWTEVPKTGKGK 78
>ref|XP_006588396.1| PREDICTED: uncharacterized protein LOC100500203 isoform X1 [Glycine
max]
Length = 108
Score = 154 bits (390), Expect = 2e-35
Identities = 74/78 (94%), Positives = 75/78 (96%)
Frame = +1
Query: 142 MSRPMEEDAPGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLCRVRAFDRHCNMV 321
MSRPMEED GKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNN+KLL RVRAFDRHCNMV
Sbjct: 1 MSRPMEEDTAGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMV 60
Query: 322 LENVREMWTEVPKTGKGK 375
LENVREMWTEVPKTGKGK
Sbjct: 61 LENVREMWTEVPKTGKGK 78
>ref|NP_001238430.1| uncharacterized protein LOC100500203 [Glycine max]
gi|255629692|gb|ACU15195.1| unknown [Glycine max]
Length = 117
Score = 154 bits (390), Expect = 2e-35
Identities = 74/78 (94%), Positives = 75/78 (96%)
Frame = +1
Query: 142 MSRPMEEDAPGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLCRVRAFDRHCNMV 321
MSRPMEED GKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNN+KLL RVRAFDRHCNMV
Sbjct: 1 MSRPMEEDTAGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMV 60
Query: 322 LENVREMWTEVPKTGKGK 375
LENVREMWTEVPKTGKGK
Sbjct: 61 LENVREMWTEVPKTGKGK 78
>ref|XP_006397961.1| hypothetical protein EUTSA_v10001688mg [Eutrema salsugineum]
gi|557099034|gb|ESQ39414.1| hypothetical protein
EUTSA_v10001688mg [Eutrema salsugineum]
Length = 108
Score = 153 bits (386), Expect = 6e-35
Identities = 74/78 (94%), Positives = 74/78 (94%)
Frame = +1
Query: 142 MSRPMEEDAPGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLCRVRAFDRHCNMV 321
MSRPMEED GK EEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLL RVRAFDRHCNMV
Sbjct: 1 MSRPMEEDTNGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMV 60
Query: 322 LENVREMWTEVPKTGKGK 375
LENVREMWTEVPKTGKGK
Sbjct: 61 LENVREMWTEVPKTGKGK 78
>ref|NP_850477.1| small nuclear ribonucleoprotein D2 [Arabidopsis thaliana]
gi|42571273|ref|NP_973710.1| small nuclear
ribonucleoprotein D2 [Arabidopsis thaliana]
gi|145332931|ref|NP_001078331.1| small nuclear
ribonucleoprotein D2 [Arabidopsis thaliana]
gi|565475276|ref|XP_006295279.1| hypothetical protein
CARUB_v10024367mg [Capsella rubella]
gi|7362764|emb|CAB83134.1| small nuclear
ribonucleoprotein-like protein [Arabidopsis thaliana]
gi|28466881|gb|AAO44049.1| At2g47640 [Arabidopsis
thaliana] gi|110743879|dbj|BAE99774.1| putative small
nuclear ribonucleoprotein D2 [Arabidopsis thaliana]
gi|330255774|gb|AEC10868.1| small nuclear
ribonucleoprotein D2 [Arabidopsis thaliana]
gi|330255775|gb|AEC10869.1| small nuclear
ribonucleoprotein D2 [Arabidopsis thaliana]
gi|332646880|gb|AEE80401.1| small nuclear
ribonucleoprotein D2 [Arabidopsis thaliana]
gi|482563987|gb|EOA28177.1| hypothetical protein
CARUB_v10024367mg [Capsella rubella]
Length = 108
Score = 152 bits (383), Expect = 1e-34
Identities = 73/78 (93%), Positives = 74/78 (94%)
Frame = +1
Query: 142 MSRPMEEDAPGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLCRVRAFDRHCNMV 321
MS+PMEED GK EEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLL RVRAFDRHCNMV
Sbjct: 1 MSKPMEEDTNGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMV 60
Query: 322 LENVREMWTEVPKTGKGK 375
LENVREMWTEVPKTGKGK
Sbjct: 61 LENVREMWTEVPKTGKGK 78
>gb|ACJ86019.1| unknown [Medicago truncatula]
Length = 108
Score = 151 bits (381), Expect = 2e-34
Identities = 73/78 (93%), Positives = 74/78 (94%)
Frame = +1
Query: 142 MSRPMEEDAPGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLCRVRAFDRHCNMV 321
MSRPMEEDA GKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNN+KLL RV AFDRHCNMV
Sbjct: 1 MSRPMEEDAVGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVGAFDRHCNMV 60
Query: 322 LENVREMWTEVPKTGKGK 375
LENVREMW EVPKTGKGK
Sbjct: 61 LENVREMWAEVPKTGKGK 78
>gb|ESW32455.1| hypothetical protein PHAVU_002G324000g [Phaseolus vulgaris]
Length = 108
Score = 149 bits (376), Expect = 8e-34
Identities = 72/78 (92%), Positives = 74/78 (94%)
Frame = +1
Query: 142 MSRPMEEDAPGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLCRVRAFDRHCNMV 321
MSRPMEED KNEEEEFNTGPLSVLMMSVK+NTQVLINCRNN+KLL RVRAFDRHCNMV
Sbjct: 1 MSRPMEEDTAVKNEEEEFNTGPLSVLMMSVKSNTQVLINCRNNKKLLGRVRAFDRHCNMV 60
Query: 322 LENVREMWTEVPKTGKGK 375
LENVREMWTEVPKTGKGK
Sbjct: 61 LENVREMWTEVPKTGKGK 78
>gb|ESW03367.1| hypothetical protein PHAVU_011G008300g [Phaseolus vulgaris]
Length = 109
Score = 149 bits (376), Expect = 8e-34
Identities = 74/79 (93%), Positives = 75/79 (94%), Gaps = 1/79 (1%)
Frame = +1
Query: 142 MSRPMEED-APGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLCRVRAFDRHCNM 318
MSRPMEED A KNEEEEFNTGPLSVLMMSVKNNTQVLINCRNN+KLL RVRAFDRHCNM
Sbjct: 1 MSRPMEEDTAAAKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNM 60
Query: 319 VLENVREMWTEVPKTGKGK 375
VLENVREMWTEVPKTGKGK
Sbjct: 61 VLENVREMWTEVPKTGKGK 79
>ref|XP_006397960.1| hypothetical protein EUTSA_v10001688mg [Eutrema salsugineum]
gi|567166912|ref|XP_006397962.1| hypothetical protein
EUTSA_v10001688mg [Eutrema salsugineum]
gi|557099033|gb|ESQ39413.1| hypothetical protein
EUTSA_v10001688mg [Eutrema salsugineum]
gi|557099035|gb|ESQ39415.1| hypothetical protein
EUTSA_v10001688mg [Eutrema salsugineum]
Length = 109
Score = 149 bits (375), Expect = 1e-33
Identities = 74/79 (93%), Positives = 74/79 (93%), Gaps = 1/79 (1%)
Frame = +1
Query: 142 MSRPMEEDA-PGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLCRVRAFDRHCNM 318
MSRPMEED GK EEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLL RVRAFDRHCNM
Sbjct: 1 MSRPMEEDTNQGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNM 60
Query: 319 VLENVREMWTEVPKTGKGK 375
VLENVREMWTEVPKTGKGK
Sbjct: 61 VLENVREMWTEVPKTGKGK 79
>ref|XP_006402336.1| hypothetical protein EUTSA_v10006266mg [Eutrema salsugineum]
gi|557103435|gb|ESQ43789.1| hypothetical protein
EUTSA_v10006266mg [Eutrema salsugineum]
Length = 178
Score = 148 bits (374), Expect = 1e-33
Identities = 74/80 (92%), Positives = 74/80 (92%), Gaps = 2/80 (2%)
Frame = +1
Query: 142 MSRPMEEDA--PGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLCRVRAFDRHCN 315
MSRPMEED GK EEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLL RVRAFDRHCN
Sbjct: 69 MSRPMEEDTNNQGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCN 128
Query: 316 MVLENVREMWTEVPKTGKGK 375
MVLENVREMWTEVPKTGKGK
Sbjct: 129 MVLENVREMWTEVPKTGKGK 148
>ref|XP_006402335.1| hypothetical protein EUTSA_v10006266mg [Eutrema salsugineum]
gi|557103434|gb|ESQ43788.1| hypothetical protein
EUTSA_v10006266mg [Eutrema salsugineum]
Length = 177
Score = 148 bits (374), Expect = 1e-33
Identities = 74/79 (93%), Positives = 74/79 (93%), Gaps = 1/79 (1%)
Frame = +1
Query: 142 MSRPMEEDAP-GKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLCRVRAFDRHCNM 318
MSRPMEED GK EEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLL RVRAFDRHCNM
Sbjct: 69 MSRPMEEDTNNGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNM 128
Query: 319 VLENVREMWTEVPKTGKGK 375
VLENVREMWTEVPKTGKGK
Sbjct: 129 VLENVREMWTEVPKTGKGK 147
>gb|EMJ03100.1| hypothetical protein PRUPE_ppa013707mg [Prunus persica]
Length = 107
Score = 148 bits (374), Expect = 1e-33
Identities = 74/78 (94%), Positives = 74/78 (94%)
Frame = +1
Query: 142 MSRPMEEDAPGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLCRVRAFDRHCNMV 321
MSRPMEED KNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLL RVRAFDRHCNMV
Sbjct: 1 MSRPMEEDVV-KNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMV 59
Query: 322 LENVREMWTEVPKTGKGK 375
LENVREMWTEVPKTGKGK
Sbjct: 60 LENVREMWTEVPKTGKGK 77
>gb|ABK21523.1| unknown [Picea sitchensis]
Length = 108
Score = 148 bits (374), Expect = 1e-33
Identities = 70/78 (89%), Positives = 74/78 (94%)
Frame = +1
Query: 142 MSRPMEEDAPGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLCRVRAFDRHCNMV 321
MS+PM+ED P K EEEEFNTGPLSVLMMSVKNNTQVLINCRNN+KLL RVRAFDRHCNMV
Sbjct: 1 MSKPMDEDMPEKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMV 60
Query: 322 LENVREMWTEVPKTGKGK 375
LENV+EMWTEVPKTGKGK
Sbjct: 61 LENVKEMWTEVPKTGKGK 78
>ref|XP_004299438.1| PREDICTED: probable small nuclear ribonucleoprotein Sm D2-like
[Fragaria vesca subsp. vesca]
Length = 107
Score = 148 bits (373), Expect = 2e-33
Identities = 73/78 (93%), Positives = 74/78 (94%)
Frame = +1
Query: 142 MSRPMEEDAPGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLCRVRAFDRHCNMV 321
MSRPMEED KNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLL RVRAFDRHCNMV
Sbjct: 1 MSRPMEEDG-AKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMV 59
Query: 322 LENVREMWTEVPKTGKGK 375
LENV+EMWTEVPKTGKGK
Sbjct: 60 LENVKEMWTEVPKTGKGK 77
>ref|XP_004146504.1| PREDICTED: probable small nuclear ribonucleoprotein Sm D2-like
[Cucumis sativus] gi|449499984|ref|XP_004160970.1|
PREDICTED: probable small nuclear ribonucleoprotein Sm
D2-like [Cucumis sativus]
Length = 107
Score = 148 bits (373), Expect = 2e-33
Identities = 73/78 (93%), Positives = 74/78 (94%)
Frame = +1
Query: 142 MSRPMEEDAPGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLCRVRAFDRHCNMV 321
MSRPMEED KNEEEEFNTGPLSVLMMSVKNNTQVLINCRNN+KLL RVRAFDRHCNMV
Sbjct: 1 MSRPMEEDT-SKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMV 59
Query: 322 LENVREMWTEVPKTGKGK 375
LENVREMWTEVPKTGKGK
Sbjct: 60 LENVREMWTEVPKTGKGK 77
>ref|XP_003630988.1| Small nuclear ribonucleoprotein-like protein [Medicago truncatula]
gi|355525010|gb|AET05464.1| Small nuclear
ribonucleoprotein-like protein [Medicago truncatula]
Length = 104
Score = 147 bits (372), Expect = 2e-33
Identities = 71/74 (95%), Positives = 72/74 (97%)
Frame = +1
Query: 154 MEEDAPGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLCRVRAFDRHCNMVLENV 333
MEEDA GKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNN+KLL RVRAFDRHCNMVLENV
Sbjct: 1 MEEDAVGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENV 60
Query: 334 REMWTEVPKTGKGK 375
REMWTEVPKTGKGK
Sbjct: 61 REMWTEVPKTGKGK 74
>ref|XP_002878480.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297324318|gb|EFH54739.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 109
Score = 147 bits (372), Expect = 2e-33
Identities = 73/79 (92%), Positives = 74/79 (93%), Gaps = 1/79 (1%)
Frame = +1
Query: 142 MSRPMEEDAP-GKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLCRVRAFDRHCNM 318
MS+PMEED GK EEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLL RVRAFDRHCNM
Sbjct: 1 MSKPMEEDTTQGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNM 60
Query: 319 VLENVREMWTEVPKTGKGK 375
VLENVREMWTEVPKTGKGK
Sbjct: 61 VLENVREMWTEVPKTGKGK 79