BLASTX nr result
ID: Atropa21_contig00004501
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00004501
(1640 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006354663.1| PREDICTED: heterogeneous nuclear ribonucleop... 342 2e-91
ref|XP_006354662.1| PREDICTED: heterogeneous nuclear ribonucleop... 341 6e-91
ref|XP_004229726.1| PREDICTED: uncharacterized protein LOC101251... 335 4e-89
ref|XP_006338911.1| PREDICTED: nucleolin-like isoform X1 [Solanu... 286 2e-74
ref|XP_006338915.1| PREDICTED: nucleolin-like isoform X5 [Solanu... 284 7e-74
ref|XP_004248987.1| PREDICTED: uncharacterized protein LOC101258... 269 3e-69
ref|XP_004248986.1| PREDICTED: uncharacterized protein LOC101258... 269 3e-69
ref|XP_006338907.1| PREDICTED: nucleolin-like isoform X1 [Solanu... 265 6e-68
ref|XP_006338909.1| PREDICTED: nucleolin-like isoform X3 [Solanu... 263 2e-67
ref|XP_004248989.1| PREDICTED: uncharacterized protein LOC101259... 259 2e-66
gb|EOX96539.1| RNA-binding family protein isoform 2 [Theobroma c... 240 1e-60
gb|EOX96538.1| RNA-binding family protein isoform 1 [Theobroma c... 240 1e-60
ref|XP_006375182.1| hypothetical protein POPTR_0014s05040g [Popu... 236 3e-59
ref|XP_006445454.1| hypothetical protein CICLE_v10018944mg [Citr... 231 7e-58
ref|NP_001275825.1| RNA recognition motif protein 1 [Citrus sine... 231 7e-58
gb|EMJ21822.1| hypothetical protein PRUPE_ppa002214mg [Prunus pe... 227 1e-56
gb|ESW06392.1| hypothetical protein PHAVU_010G044700g [Phaseolus... 223 2e-55
gb|EXB38373.1| Heterogeneous nuclear ribonucleoprotein Q [Morus ... 221 5e-55
ref|XP_004307249.1| PREDICTED: uncharacterized protein LOC101302... 220 1e-54
ref|XP_002526479.1| RNA binding protein, putative [Ricinus commu... 218 5e-54
>ref|XP_006354663.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R-like isoform X2
[Solanum tuberosum]
Length = 789
Score = 342 bits (878), Expect = 2e-91
Identities = 184/272 (67%), Positives = 191/272 (70%), Gaps = 9/272 (3%)
Frame = -2
Query: 1639 ELGEGDKKVKVRARLSRPLQRGRGRYGARDLRPRHG----PPAPWGXXXXXXXXXXXXXV 1472
ELGEGDKKVKVRARLSRPLQRGRGRYGARDLRPR G PPAPW V
Sbjct: 452 ELGEGDKKVKVRARLSRPLQRGRGRYGARDLRPRRGLMRGPPAPWSRPVSRRLPVRGSRV 511
Query: 1471 STHFPPRADRSFKRPVAMRDRRPVMAVAPRGRPVAPLSSRSYDRRPPVTSYPKSHFKREY 1292
S+ PP ADRSFKRPV MRDRRPVMA PRGRP++PLSSRSYDRRPPV SY KS+ KREY
Sbjct: 512 SSRVPPLADRSFKRPVTMRDRRPVMA--PRGRPMSPLSSRSYDRRPPVPSYSKSNLKREY 569
Query: 1291 TRHEEIPPPRSRAAVDYPSRFPPXXXXXXXXXXXXXXXXXS-----TARPATRRAYADDG 1127
RHEEIPPPRSRA VDYPSRFP S TAR TRR Y DD
Sbjct: 570 ARHEEIPPPRSRATVDYPSRFPSDRRVSYRDDYSSRSSGYSDFPRGTARTTTRRTYVDDD 629
Query: 1126 YEKRFERPPPAYREGRGREYDSMSGSKRPYSAMDDVPLPYAEAGTRPSRSRLDYELGGAS 947
YE+R+ERPPPAYREGRGREYDS SGSKR YSAMDDVP YA+AG RPSRSRLDYELGGAS
Sbjct: 630 YEQRYERPPPAYREGRGREYDSTSGSKRSYSAMDDVPPRYADAGPRPSRSRLDYELGGAS 689
Query: 946 GTQYGDYSDXXXXXXXXXXXXXXXXXXGQDSH 851
GTQYGDYSD GQDSH
Sbjct: 690 GTQYGDYSDSRLGRSNAGYSGSRNSLSGQDSH 721
>ref|XP_006354662.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R-like isoform X1
[Solanum tuberosum]
Length = 790
Score = 341 bits (874), Expect = 6e-91
Identities = 179/249 (71%), Positives = 186/249 (74%), Gaps = 9/249 (3%)
Frame = -2
Query: 1639 ELGEGDKKVKVRARLSRPLQRGRGRYGARDLRPRHG----PPAPWGXXXXXXXXXXXXXV 1472
ELGEGDKKVKVRARLSRPLQRGRGRYGARDLRPR G PPAPW V
Sbjct: 452 ELGEGDKKVKVRARLSRPLQRGRGRYGARDLRPRRGLMRGPPAPWSRPVSRRLPVRGSRV 511
Query: 1471 STHFPPRADRSFKRPVAMRDRRPVMAVAPRGRPVAPLSSRSYDRRPPVTSYPKSHFKREY 1292
S+ PP ADRSFKRPV MRDRRPVMA PRGRP++PLSSRSYDRRPPV SY KS+ KREY
Sbjct: 512 SSRVPPLADRSFKRPVTMRDRRPVMA--PRGRPMSPLSSRSYDRRPPVPSYSKSNLKREY 569
Query: 1291 TRHEEIPPPRSRAAVDYPSRFPPXXXXXXXXXXXXXXXXXS-----TARPATRRAYADDG 1127
RHEEIPPPRSRA VDYPSRFP S TAR TRR Y DD
Sbjct: 570 ARHEEIPPPRSRATVDYPSRFPSDRRVSYRDDYSSRSSGYSDFPRGTARTTTRRTYVDDD 629
Query: 1126 YEKRFERPPPAYREGRGREYDSMSGSKRPYSAMDDVPLPYAEAGTRPSRSRLDYELGGAS 947
YE+R+ERPPPAYREGRGREYDS SGSKR YSAMDDVP YA+AG RPSRSRLDYELGGAS
Sbjct: 630 YEQRYERPPPAYREGRGREYDSTSGSKRSYSAMDDVPPRYADAGPRPSRSRLDYELGGAS 689
Query: 946 GTQYGDYSD 920
GTQYGDYSD
Sbjct: 690 GTQYGDYSD 698
>ref|XP_004229726.1| PREDICTED: uncharacterized protein LOC101251325 [Solanum
lycopersicum]
Length = 783
Score = 335 bits (858), Expect = 4e-89
Identities = 179/272 (65%), Positives = 188/272 (69%), Gaps = 9/272 (3%)
Frame = -2
Query: 1639 ELGEGDKKVKVRARLSRPLQRGRGRYGARDLRPRHG----PPAPWGXXXXXXXXXXXXXV 1472
ELGEGDKKVKVRARLSRPLQRGRGRYGARDLRPR G PPAPWG V
Sbjct: 446 ELGEGDKKVKVRARLSRPLQRGRGRYGARDLRPRRGMMRGPPAPWGRPVSRRLPVRGSRV 505
Query: 1471 STHFPPRADRSFKRPVAMRDRRPVMAVAPRGRPVAPLSSRSYDRRPPVTSYPKSHFKREY 1292
+ PP DRSFKRPV MRDRRPVMA PRGRP++PLSSRSYDRRPPV SY KS+ KREY
Sbjct: 506 GSRVPPLGDRSFKRPVTMRDRRPVMA--PRGRPMSPLSSRSYDRRPPVPSYSKSNLKREY 563
Query: 1291 TRHEEIPPPRSRAAVDYPSRFPPXXXXXXXXXXXXXXXXXS-----TARPATRRAYADDG 1127
RHEEIPPPRSR+ VDYPSRFP S TAR TRR Y DD
Sbjct: 564 ARHEEIPPPRSRSTVDYPSRFPSDRRVSYRDDYSSRSSAYSDFPRGTARTTTRRTYVDDD 623
Query: 1126 YEKRFERPPPAYREGRGREYDSMSGSKRPYSAMDDVPLPYAEAGTRPSRSRLDYELGGAS 947
YE+R+ERPPPAYREGRGREYDS SGSKR YSAMDDVP YA+AG RPSR+RLDYELG AS
Sbjct: 624 YEQRYERPPPAYREGRGREYDSTSGSKRSYSAMDDVPPRYADAGPRPSRARLDYELGDAS 683
Query: 946 GTQYGDYSDXXXXXXXXXXXXXXXXXXGQDSH 851
G QYGDYSD GQDSH
Sbjct: 684 GAQYGDYSDSRLGRSNAGYSGSRSSLSGQDSH 715
>ref|XP_006338911.1| PREDICTED: nucleolin-like isoform X1 [Solanum tuberosum]
gi|565343588|ref|XP_006338912.1| PREDICTED:
nucleolin-like isoform X2 [Solanum tuberosum]
gi|565343590|ref|XP_006338913.1| PREDICTED:
nucleolin-like isoform X3 [Solanum tuberosum]
gi|565343592|ref|XP_006338914.1| PREDICTED:
nucleolin-like isoform X4 [Solanum tuberosum]
Length = 774
Score = 286 bits (731), Expect = 2e-74
Identities = 158/273 (57%), Positives = 170/273 (62%), Gaps = 10/273 (3%)
Frame = -2
Query: 1639 ELGEGDKKVKVRARLSRPLQRGRGRYGAR-DLRP----RHGPPAPWGXXXXXXXXXXXXX 1475
ELGEGD KVKVRARLSRPL+RGRG+YG R DLRP HGP APWG
Sbjct: 438 ELGEGDNKVKVRARLSRPLERGRGKYGGRGDLRPWRMSMHGPRAPWGRIVPHSHAIRGTR 497
Query: 1474 VSTHFPPRADRSFKRPVAMRDRRPVMAVAPRGRPVAPLSSRSYDRRPPVTSYPKSHFKRE 1295
VST PP R FKRP RDRR VM + PRGRP AP SSRSYDRRPPV SYPKS KRE
Sbjct: 498 VSTRMPPVVGRGFKRPAGSRDRRAVMDLPPRGRPTAPPSSRSYDRRPPVPSYPKSSLKRE 557
Query: 1294 YTRHEEIPPPRSRAAVDYPSRFPPXXXXXXXXXXXXXXXXXST----ARPATRRAYADDG 1127
Y R EEIPPP+SRA +YPSR A RRAY DDG
Sbjct: 558 YGRREEIPPPKSRAVAEYPSRVHSDRRASYRDEYSSRGSGYPELPRGTHSAARRAYVDDG 617
Query: 1126 YEKRFERPPPAYREGRGREYDSMSGSKRPYSAMDDVPLPYAEAGTRPSRSRLDYELGGAS 947
Y +RFERPPP+YREGRGREYDS SGSKRPY+A+DDV YAEAG R SR+RLDYELG S
Sbjct: 618 YGQRFERPPPSYREGRGREYDSASGSKRPYTAVDDVHPRYAEAGVRHSRARLDYELGSGS 677
Query: 946 GTQYGD-YSDXXXXXXXXXXXXXXXXXXGQDSH 851
G+ YGD Y+D GQDSH
Sbjct: 678 GSHYGDAYADSRLGRSNLGYGGSRGSLSGQDSH 710
>ref|XP_006338915.1| PREDICTED: nucleolin-like isoform X5 [Solanum tuberosum]
Length = 773
Score = 284 bits (727), Expect = 7e-74
Identities = 153/250 (61%), Positives = 165/250 (66%), Gaps = 10/250 (4%)
Frame = -2
Query: 1639 ELGEGDKKVKVRARLSRPLQRGRGRYGAR-DLRP----RHGPPAPWGXXXXXXXXXXXXX 1475
ELGEGD KVKVRARLSRPL+RGRG+YG R DLRP HGP APWG
Sbjct: 438 ELGEGDNKVKVRARLSRPLERGRGKYGGRGDLRPWRMSMHGPRAPWGRIVPHSHAIRGTR 497
Query: 1474 VSTHFPPRADRSFKRPVAMRDRRPVMAVAPRGRPVAPLSSRSYDRRPPVTSYPKSHFKRE 1295
VST PP R FKRP RDRR VM + PRGRP AP SSRSYDRRPPV SYPKS KRE
Sbjct: 498 VSTRMPPVVGRGFKRPAGSRDRRAVMDLPPRGRPTAPPSSRSYDRRPPVPSYPKSSLKRE 557
Query: 1294 YTRHEEIPPPRSRAAVDYPSRFPPXXXXXXXXXXXXXXXXXST----ARPATRRAYADDG 1127
Y R EEIPPP+SRA +YPSR A RRAY DDG
Sbjct: 558 YGRREEIPPPKSRAVAEYPSRVHSDRRASYRDEYSSRGSGYPELPRGTHSAARRAYVDDG 617
Query: 1126 YEKRFERPPPAYREGRGREYDSMSGSKRPYSAMDDVPLPYAEAGTRPSRSRLDYELGGAS 947
Y +RFERPPP+YREGRGREYDS SGSKRPY+A+DDV YAEAG R SR+RLDYELG S
Sbjct: 618 YGQRFERPPPSYREGRGREYDSASGSKRPYTAVDDVHPRYAEAGVRHSRARLDYELGSGS 677
Query: 946 GTQYGD-YSD 920
G+ YGD Y+D
Sbjct: 678 GSHYGDAYAD 687
>ref|XP_004248987.1| PREDICTED: uncharacterized protein LOC101258799 isoform 2 [Solanum
lycopersicum]
Length = 767
Score = 269 bits (687), Expect = 3e-69
Identities = 149/250 (59%), Positives = 160/250 (64%), Gaps = 10/250 (4%)
Frame = -2
Query: 1639 ELGEGDKKVKVRARLSRPLQRGRGRYGAR-DLRP----RHGPPAPWGXXXXXXXXXXXXX 1475
ELGEGD KVKVRARLSRPL+RGR +YG R DLRP HGP APWG
Sbjct: 433 ELGEGDNKVKVRARLSRPLERGRAKYGGRGDLRPWRMSMHGPRAPWGRIVPHSRAIRGTR 492
Query: 1474 VSTHFPPRADRSFKRPVAMRDRRPVMAVAPRGRPVAPLSSRSYDRRPPVTSYPKSHFKRE 1295
VST PP R FKRP RDRR VM + PRGRP AP SSRSYDRRPPV SYPKS KRE
Sbjct: 493 VSTRVPPVVSRGFKRPAGSRDRRAVMDLPPRGRPTAPPSSRSYDRRPPVPSYPKSSLKRE 552
Query: 1294 YTRHEEIPPPRSRAAVDYPSRFPPXXXXXXXXXXXXXXXXXST----ARPATRRAYADDG 1127
Y R EEIPPPRSRA +YPSR A RR+Y DDG
Sbjct: 553 YGRREEIPPPRSRAIAEYPSRVHSDRRASYRDEYSSRGSGYPELPRGTHSAARRSYVDDG 612
Query: 1126 YEKRFERPPPAYREGRGREYDSMSGSKRPYSAMDDVPLPYAEAGTRPSRSRLDYELGGAS 947
Y +RFER PP+YREGRGREYDS SGSK PY+A DDV YAEAG + SR+RLDYELG S
Sbjct: 613 YGQRFER-PPSYREGRGREYDSASGSKHPYTAGDDVHPRYAEAGVQHSRARLDYELGSGS 671
Query: 946 GTQYGD-YSD 920
G+ YGD Y D
Sbjct: 672 GSHYGDSYGD 681
>ref|XP_004248986.1| PREDICTED: uncharacterized protein LOC101258799 isoform 1 [Solanum
lycopersicum]
Length = 793
Score = 269 bits (687), Expect = 3e-69
Identities = 149/250 (59%), Positives = 160/250 (64%), Gaps = 10/250 (4%)
Frame = -2
Query: 1639 ELGEGDKKVKVRARLSRPLQRGRGRYGAR-DLRP----RHGPPAPWGXXXXXXXXXXXXX 1475
ELGEGD KVKVRARLSRPL+RGR +YG R DLRP HGP APWG
Sbjct: 459 ELGEGDNKVKVRARLSRPLERGRAKYGGRGDLRPWRMSMHGPRAPWGRIVPHSRAIRGTR 518
Query: 1474 VSTHFPPRADRSFKRPVAMRDRRPVMAVAPRGRPVAPLSSRSYDRRPPVTSYPKSHFKRE 1295
VST PP R FKRP RDRR VM + PRGRP AP SSRSYDRRPPV SYPKS KRE
Sbjct: 519 VSTRVPPVVSRGFKRPAGSRDRRAVMDLPPRGRPTAPPSSRSYDRRPPVPSYPKSSLKRE 578
Query: 1294 YTRHEEIPPPRSRAAVDYPSRFPPXXXXXXXXXXXXXXXXXST----ARPATRRAYADDG 1127
Y R EEIPPPRSRA +YPSR A RR+Y DDG
Sbjct: 579 YGRREEIPPPRSRAIAEYPSRVHSDRRASYRDEYSSRGSGYPELPRGTHSAARRSYVDDG 638
Query: 1126 YEKRFERPPPAYREGRGREYDSMSGSKRPYSAMDDVPLPYAEAGTRPSRSRLDYELGGAS 947
Y +RFER PP+YREGRGREYDS SGSK PY+A DDV YAEAG + SR+RLDYELG S
Sbjct: 639 YGQRFER-PPSYREGRGREYDSASGSKHPYTAGDDVHPRYAEAGVQHSRARLDYELGSGS 697
Query: 946 GTQYGD-YSD 920
G+ YGD Y D
Sbjct: 698 GSHYGDSYGD 707
>ref|XP_006338907.1| PREDICTED: nucleolin-like isoform X1 [Solanum tuberosum]
gi|565343580|ref|XP_006338908.1| PREDICTED:
nucleolin-like isoform X2 [Solanum tuberosum]
Length = 786
Score = 265 bits (676), Expect = 6e-68
Identities = 148/273 (54%), Positives = 163/273 (59%), Gaps = 10/273 (3%)
Frame = -2
Query: 1639 ELGEGDKKVKVRARLSRPLQRGRGRYGARD-----LRPRHGPPAPWGXXXXXXXXXXXXX 1475
ELGEGD KVKVRARLSRPL GRG+YG R P HG APWG
Sbjct: 449 ELGEGDNKVKVRARLSRPLHMGRGKYGGRGEFRPWRMPMHGSHAPWGRTAPYSRSIRGTR 508
Query: 1474 VSTHFPPRADRSFKRPVAMRDRRPVMAVAPRGRPVAPLSSRSYDRRPPVTSYPKSHFKRE 1295
VST PP R FKRP A+RDR MA++PRGR +A RSYDRRPPV+SYPKS+FKRE
Sbjct: 509 VSTCMPPVVGRGFKRPAALRDRHAEMALSPRGRFMASPPRRSYDRRPPVSSYPKSNFKRE 568
Query: 1294 YTRHEEIPPPRSRAAVDYPSRFPPXXXXXXXXXXXXXXXXXST----ARPATRRAYADDG 1127
Y R EEI P RSRA +YPSR A RRAY DDG
Sbjct: 569 YGRREEISPSRSRAIAEYPSRVHSDRRISYRDEYSSRGSGYPELPRGTHSAARRAYVDDG 628
Query: 1126 YEKRFERPPPAYREGRGREYDSMSGSKRPYSAMDDVPLPYAEAGTRPSRSRLDYELGGAS 947
Y +RFERPPP+YREGRGREYDS+SGSKRPY+A+DDV YAEAG R SR+RLDYELG S
Sbjct: 629 YGQRFERPPPSYREGRGREYDSVSGSKRPYTAVDDVHPHYAEAGMRHSRARLDYELGSGS 688
Query: 946 GTQYGD-YSDXXXXXXXXXXXXXXXXXXGQDSH 851
G+ YGD Y D QDSH
Sbjct: 689 GSHYGDAYGDSRLGRSNLGYGGNRSSISRQDSH 721
>ref|XP_006338909.1| PREDICTED: nucleolin-like isoform X3 [Solanum tuberosum]
gi|565343584|ref|XP_006338910.1| PREDICTED:
nucleolin-like isoform X4 [Solanum tuberosum]
Length = 785
Score = 263 bits (672), Expect = 2e-67
Identities = 144/250 (57%), Positives = 159/250 (63%), Gaps = 10/250 (4%)
Frame = -2
Query: 1639 ELGEGDKKVKVRARLSRPLQRGRGRYGARD-----LRPRHGPPAPWGXXXXXXXXXXXXX 1475
ELGEGD KVKVRARLSRPL GRG+YG R P HG APWG
Sbjct: 449 ELGEGDNKVKVRARLSRPLHMGRGKYGGRGEFRPWRMPMHGSHAPWGRTAPYSRSIRGTR 508
Query: 1474 VSTHFPPRADRSFKRPVAMRDRRPVMAVAPRGRPVAPLSSRSYDRRPPVTSYPKSHFKRE 1295
VST PP R FKRP A+RDR MA++PRGR +A RSYDRRPPV+SYPKS+FKRE
Sbjct: 509 VSTCMPPVVGRGFKRPAALRDRHAEMALSPRGRFMASPPRRSYDRRPPVSSYPKSNFKRE 568
Query: 1294 YTRHEEIPPPRSRAAVDYPSRFPPXXXXXXXXXXXXXXXXXST----ARPATRRAYADDG 1127
Y R EEI P RSRA +YPSR A RRAY DDG
Sbjct: 569 YGRREEISPSRSRAIAEYPSRVHSDRRISYRDEYSSRGSGYPELPRGTHSAARRAYVDDG 628
Query: 1126 YEKRFERPPPAYREGRGREYDSMSGSKRPYSAMDDVPLPYAEAGTRPSRSRLDYELGGAS 947
Y +RFERPPP+YREGRGREYDS+SGSKRPY+A+DDV YAEAG R SR+RLDYELG S
Sbjct: 629 YGQRFERPPPSYREGRGREYDSVSGSKRPYTAVDDVHPHYAEAGMRHSRARLDYELGSGS 688
Query: 946 GTQYGD-YSD 920
G+ YGD Y D
Sbjct: 689 GSHYGDAYGD 698
>ref|XP_004248989.1| PREDICTED: uncharacterized protein LOC101259595 [Solanum
lycopersicum]
Length = 769
Score = 259 bits (663), Expect = 2e-66
Identities = 141/250 (56%), Positives = 157/250 (62%), Gaps = 10/250 (4%)
Frame = -2
Query: 1639 ELGEGDKKVKVRARLSRPLQRGRGRYGARD-----LRPRHGPPAPWGXXXXXXXXXXXXX 1475
E GEGD KVKVRARLSRPL GRG+YG R P HG APWG
Sbjct: 433 EFGEGDNKVKVRARLSRPLHMGRGKYGGRGEFRPWRMPMHGSHAPWGRTVPYSRSIRGTR 492
Query: 1474 VSTHFPPRADRSFKRPVAMRDRRPVMAVAPRGRPVAPLSSRSYDRRPPVTSYPKSHFKRE 1295
VST PP R FKRP A+RDR MA++PRGR +A RSYDRRPPV+SYPKS+FKR+
Sbjct: 493 VSTRMPPVVSRGFKRPTALRDRHAEMALSPRGRSMASPPRRSYDRRPPVSSYPKSNFKRD 552
Query: 1294 YTRHEEIPPPRSRAAVDYPSRFPPXXXXXXXXXXXXXXXXXST----ARPATRRAYADDG 1127
Y R EEI P RSRA +YPSR A RR+Y DDG
Sbjct: 553 YGRREEISPSRSRAIPEYPSRVHSDRRISYRDEYSSRGSGYPELPRGTHSAARRSYVDDG 612
Query: 1126 YEKRFERPPPAYREGRGREYDSMSGSKRPYSAMDDVPLPYAEAGTRPSRSRLDYELGGAS 947
Y +RFERPPP+YREGRGREYDS+SGSKRPY A+DDV YA AG R SR+RLDYELG AS
Sbjct: 613 YGQRFERPPPSYREGRGREYDSVSGSKRPYMAVDDVHPHYAMAGVRHSRARLDYELGSAS 672
Query: 946 GTQYGD-YSD 920
G+ YGD Y D
Sbjct: 673 GSHYGDAYGD 682
>gb|EOX96539.1| RNA-binding family protein isoform 2 [Theobroma cacao]
Length = 802
Score = 240 bits (613), Expect = 1e-60
Identities = 138/265 (52%), Positives = 155/265 (58%), Gaps = 25/265 (9%)
Frame = -2
Query: 1639 ELGEGDKKVKVRARLSRPLQRGRGRYGARD-----------LRPRHGPPAPWGXXXXXXX 1493
ELGEGD K KVRARLSRP QRGRG++ RD +R G P P G
Sbjct: 468 ELGEGDSKAKVRARLSRPHQRGRGKHIGRDGFRSGRGSGRVVRGSWGRPPPRG------- 520
Query: 1492 XXXXXXVSTHFPPRADR---------SFKRPVAMRDRRPVMAVAPRGRPVAPLSSRSYDR 1340
FPPR R S KRPV +RDRRP+M+ RGRP+AP SRSYDR
Sbjct: 521 ----------FPPRGVRGISNRVPPPSLKRPVGLRDRRPIMSTPARGRPLAPPPSRSYDR 570
Query: 1339 RPPVTSYPKSHFKREYTRHEEIPPPRSRAAVDY-----PSRFPPXXXXXXXXXXXXXXXX 1175
R PV YPKS KREY R +E+PPPRSRA VDY P R P
Sbjct: 571 RAPVPPYPKSSLKREYGRRDELPPPRSRAPVDYGSRVVPERRPSYRDDYSARSSGYSDLP 630
Query: 1174 XSTARPATRRAYADDGYEKRFERPPPAYREGRGREYDSMSGSKRPYSAMDDVPLPYAEAG 995
ST+R A RR Y DD Y +RFERPPP+YR+GRGR+YDSMSGSKRPYSAMDDVP YA+AG
Sbjct: 631 RSTSRTAARRPYVDDAYGQRFERPPPSYRDGRGRDYDSMSGSKRPYSAMDDVPPRYADAG 690
Query: 994 TRPSRSRLDYELGGASGTQYGDYSD 920
R SR+RLDYEL + Y D
Sbjct: 691 ARHSRARLDYELATGAPPYADTYGD 715
>gb|EOX96538.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|508704644|gb|EOX96540.1| RNA-binding family protein
isoform 1 [Theobroma cacao]
Length = 808
Score = 240 bits (613), Expect = 1e-60
Identities = 138/265 (52%), Positives = 155/265 (58%), Gaps = 25/265 (9%)
Frame = -2
Query: 1639 ELGEGDKKVKVRARLSRPLQRGRGRYGARD-----------LRPRHGPPAPWGXXXXXXX 1493
ELGEGD K KVRARLSRP QRGRG++ RD +R G P P G
Sbjct: 468 ELGEGDSKAKVRARLSRPHQRGRGKHIGRDGFRSGRGSGRVVRGSWGRPPPRG------- 520
Query: 1492 XXXXXXVSTHFPPRADR---------SFKRPVAMRDRRPVMAVAPRGRPVAPLSSRSYDR 1340
FPPR R S KRPV +RDRRP+M+ RGRP+AP SRSYDR
Sbjct: 521 ----------FPPRGVRGISNRVPPPSLKRPVGLRDRRPIMSTPARGRPLAPPPSRSYDR 570
Query: 1339 RPPVTSYPKSHFKREYTRHEEIPPPRSRAAVDY-----PSRFPPXXXXXXXXXXXXXXXX 1175
R PV YPKS KREY R +E+PPPRSRA VDY P R P
Sbjct: 571 RAPVPPYPKSSLKREYGRRDELPPPRSRAPVDYGSRVVPERRPSYRDDYSARSSGYSDLP 630
Query: 1174 XSTARPATRRAYADDGYEKRFERPPPAYREGRGREYDSMSGSKRPYSAMDDVPLPYAEAG 995
ST+R A RR Y DD Y +RFERPPP+YR+GRGR+YDSMSGSKRPYSAMDDVP YA+AG
Sbjct: 631 RSTSRTAARRPYVDDAYGQRFERPPPSYRDGRGRDYDSMSGSKRPYSAMDDVPPRYADAG 690
Query: 994 TRPSRSRLDYELGGASGTQYGDYSD 920
R SR+RLDYEL + Y D
Sbjct: 691 ARHSRARLDYELATGAPPYADTYGD 715
>ref|XP_006375182.1| hypothetical protein POPTR_0014s05040g [Populus trichocarpa]
gi|550323501|gb|ERP52979.1| hypothetical protein
POPTR_0014s05040g [Populus trichocarpa]
Length = 785
Score = 236 bits (601), Expect = 3e-59
Identities = 140/259 (54%), Positives = 164/259 (63%), Gaps = 19/259 (7%)
Frame = -2
Query: 1639 ELGEGDKKVKVRARLSRPLQRGRGRYGAR-DLRPRHGPP----APWGXXXXXXXXXXXXX 1475
ELGEGD KVKVRARLSRPLQRG+G++ +R D + HG PW
Sbjct: 452 ELGEGDNKVKVRARLSRPLQRGKGKHASRGDFQSGHGASRVVRGPW-------VRPLQHS 504
Query: 1474 VSTHFPP------RADR-SFKRPVAMRDRRP-VMAVAPRGRPVAPLSSRSYDRRPPVTSY 1319
ST PP RA S KR +R+RRP VM++ R RP+AP SRSYDRRPP SY
Sbjct: 505 YSTRAPPVRGIATRAPPVSLKRSPGLRERRPPVMSMPARSRPLAP-HSRSYDRRPPPPSY 563
Query: 1318 PKSHFKREYTRHEEIPPPRSRAAVDY-----PSRFPPXXXXXXXXXXXXXXXXXSTARPA 1154
PK FKREY RHEE+P PRSR AVDY P R P ST+R +
Sbjct: 564 PKGSFKREYVRHEELPSPRSRPAVDYGPRSVPERRPSYREDYSSRGTSYSDLPRSTSRTS 623
Query: 1153 TRRAYADDGYEKRFERPPPAYREGRGREYDSMSGSKRPYSAMDDVPLPYAEAGTRPSRSR 974
RRAYADDGY +R+ERPPP+Y EGR R+YDS++GSKRPYSA+DD+P YA+AG R SR R
Sbjct: 624 ARRAYADDGYNQRYERPPPSYHEGRSRDYDSVAGSKRPYSAIDDIPPRYADAGARHSRPR 683
Query: 973 LDYELGGASGTQYGD-YSD 920
LDYEL G+ +QYGD YSD
Sbjct: 684 LDYEL-GSRASQYGDAYSD 701
>ref|XP_006445454.1| hypothetical protein CICLE_v10018944mg [Citrus clementina]
gi|567905934|ref|XP_006445455.1| hypothetical protein
CICLE_v10018944mg [Citrus clementina]
gi|568819727|ref|XP_006464397.1| PREDICTED: nucleolin
isoform X1 [Citrus sinensis]
gi|568819729|ref|XP_006464398.1| PREDICTED: nucleolin
isoform X2 [Citrus sinensis]
gi|568819731|ref|XP_006464399.1| PREDICTED: nucleolin
isoform X3 [Citrus sinensis] gi|557547716|gb|ESR58694.1|
hypothetical protein CICLE_v10018944mg [Citrus
clementina] gi|557547717|gb|ESR58695.1| hypothetical
protein CICLE_v10018944mg [Citrus clementina]
Length = 776
Score = 231 bits (589), Expect = 7e-58
Identities = 130/251 (51%), Positives = 154/251 (61%), Gaps = 11/251 (4%)
Frame = -2
Query: 1639 ELGEGDKKVKVRARLSRPLQRGRGRYGAR-DLRPRHGPP----APWGXXXXXXXXXXXXX 1475
ELGEGD K KVRARLSRPLQRG+G++ +R D R G WG
Sbjct: 439 ELGEGDNKAKVRARLSRPLQRGKGKHASRGDFRSGRGTGRATRGSWGLPSPRSLPGRSAR 498
Query: 1474 V-STHFPPRADRSFKRPVAMRDRRPVMAVAPRGRPVAPLSSRSYDRRPPVTSYPKSHFKR 1298
+ PP S KRPV +RDRRP+M++ R RP+ P RSYDRR PV SYPK KR
Sbjct: 499 GIGSRLPPA---SVKRPVPVRDRRPIMSMTARARPMPPPPPRSYDRRAPVPSYPKPGLKR 555
Query: 1297 EYTRHEEIPPPRSRAAVDYPSRFPPXXXXXXXXXXXXXXXXXS----TARPATRRAYADD 1130
EY R +E+PPPRSRA VDY SR P T+R A RR Y DD
Sbjct: 556 EYGRRDEVPPPRSRAPVDYGSRVVPDRRPYRDEYTSRGSGYPDMPRSTSRGAARRPYVDD 615
Query: 1129 GYEKRFERPPPAYREGRGREYDSMSGSKRPYSAMDDVPLPYAEAGTRPSRSRLDYELGGA 950
GY +RFERPPP+YREGR R+Y+++SGSKRPYS +DDVP YA+ G R SR+RLDY+LGG
Sbjct: 616 GYAQRFERPPPSYREGRARDYETVSGSKRPYSVVDDVPPRYADPGVRHSRARLDYDLGGG 675
Query: 949 SGTQYGD-YSD 920
+ QYGD Y D
Sbjct: 676 A-PQYGDAYGD 685
>ref|NP_001275825.1| RNA recognition motif protein 1 [Citrus sinensis]
gi|567905936|ref|XP_006445456.1| hypothetical protein
CICLE_v10018944mg [Citrus clementina]
gi|568819733|ref|XP_006464400.1| PREDICTED: nucleolin
isoform X4 [Citrus sinensis] gi|359386142|gb|AEV43360.1|
RNA recognition motif protein 1 [Citrus sinensis]
gi|557547718|gb|ESR58696.1| hypothetical protein
CICLE_v10018944mg [Citrus clementina]
Length = 775
Score = 231 bits (589), Expect = 7e-58
Identities = 130/251 (51%), Positives = 154/251 (61%), Gaps = 11/251 (4%)
Frame = -2
Query: 1639 ELGEGDKKVKVRARLSRPLQRGRGRYGAR-DLRPRHGPP----APWGXXXXXXXXXXXXX 1475
ELGEGD K KVRARLSRPLQRG+G++ +R D R G WG
Sbjct: 439 ELGEGDNKAKVRARLSRPLQRGKGKHASRGDFRSGRGTGRATRGSWGLPSPRSLPGRSAR 498
Query: 1474 V-STHFPPRADRSFKRPVAMRDRRPVMAVAPRGRPVAPLSSRSYDRRPPVTSYPKSHFKR 1298
+ PP S KRPV +RDRRP+M++ R RP+ P RSYDRR PV SYPK KR
Sbjct: 499 GIGSRLPPA---SVKRPVPVRDRRPIMSMTARARPMPPPPPRSYDRRAPVPSYPKPGLKR 555
Query: 1297 EYTRHEEIPPPRSRAAVDYPSRFPPXXXXXXXXXXXXXXXXXS----TARPATRRAYADD 1130
EY R +E+PPPRSRA VDY SR P T+R A RR Y DD
Sbjct: 556 EYGRRDEVPPPRSRAPVDYGSRVVPDRRPYRDEYTSRGSGYPDMPRSTSRGAARRPYVDD 615
Query: 1129 GYEKRFERPPPAYREGRGREYDSMSGSKRPYSAMDDVPLPYAEAGTRPSRSRLDYELGGA 950
GY +RFERPPP+YREGR R+Y+++SGSKRPYS +DDVP YA+ G R SR+RLDY+LGG
Sbjct: 616 GYAQRFERPPPSYREGRARDYETVSGSKRPYSVVDDVPPRYADPGVRHSRARLDYDLGGG 675
Query: 949 SGTQYGD-YSD 920
+ QYGD Y D
Sbjct: 676 A-PQYGDAYGD 685
>gb|EMJ21822.1| hypothetical protein PRUPE_ppa002214mg [Prunus persica]
Length = 700
Score = 227 bits (579), Expect = 1e-56
Identities = 137/260 (52%), Positives = 160/260 (61%), Gaps = 20/260 (7%)
Frame = -2
Query: 1639 ELGEGDKKVKVRARLSRPLQRGRGRY-GARDLRPRHGPP----APWGXXXXXXXXXXXXX 1475
ELGEGD K KVRARLSRPLQRG+G++ G D RP WG
Sbjct: 359 ELGEGDNKAKVRARLSRPLQRGKGKHVGRGDYRPSRAVGRVVRGSWGRPTPRSLPPLRGL 418
Query: 1474 VS--THFPPRADRSFKRPVAMRDRRPVMAVAP-RGRPVAPLSSRSYDRRPPVTSYPKSHF 1304
+ PP S KRPV +R+RRP M+ P RGRP+ P +RSYDRRPPV +YPKS F
Sbjct: 419 RGVGSRIPPA---SVKRPVGLRERRPAMSPYPARGRPLPP-PARSYDRRPPVPAYPKSSF 474
Query: 1303 KREYTRHEEIPPPRSRAAVDYPSRFPP-----XXXXXXXXXXXXXXXXXSTARPATRRAY 1139
KREY R +E+PPPRSR A DY SR P ST+R RRAY
Sbjct: 475 KREYGRRDEVPPPRSRVATDYGSRAVPERRQSYRDDYTPRGPGYSDPPRSTSRTGGRRAY 534
Query: 1138 ADDGYEKRFER------PPPAYREGRGREYDSMSGSKRPYSAMDDVPLPYAEAGTRPSRS 977
D+GY +R+ER PPP+YREGR R+YDS+SGSKRPYSA+DDVP YA+AG R SR+
Sbjct: 535 VDEGYGQRYERHPPPSHPPPSYREGRARDYDSISGSKRPYSALDDVPPRYADAGIRQSRA 594
Query: 976 RLDYELGGASGTQYGD-YSD 920
RLDYE ASG+QYGD YSD
Sbjct: 595 RLDYEY--ASGSQYGDAYSD 612
>gb|ESW06392.1| hypothetical protein PHAVU_010G044700g [Phaseolus vulgaris]
gi|561007444|gb|ESW06393.1| hypothetical protein
PHAVU_010G044700g [Phaseolus vulgaris]
gi|561007445|gb|ESW06394.1| hypothetical protein
PHAVU_010G044700g [Phaseolus vulgaris]
Length = 818
Score = 223 bits (567), Expect = 2e-55
Identities = 135/281 (48%), Positives = 161/281 (57%), Gaps = 18/281 (6%)
Frame = -2
Query: 1639 ELGEGDKKVKVRARLSRPLQRGRGRYGAR-DLRPRHG----PPAPWGXXXXXXXXXXXXX 1475
ELGEGDKK KVRARLSRPLQRGRG++ +R D R G P W
Sbjct: 477 ELGEGDKKAKVRARLSRPLQRGRGKHISRGDYRSGRGSGMMPRPSWSRPAPRTFTRGARG 536
Query: 1474 VSTHFPPRADRSFKRPVAMRDRRPVMAVAPRGRPVAPLSSRSYDRRPPVTSYPKSHFKRE 1295
V + PP RPV++RDRRP+M++ R RPV P SRSYDRRP +YPKS KR+
Sbjct: 537 VGSRAPP------VRPVSVRDRRPIMSIPARSRPVPP-PSRSYDRRPVAPAYPKSSMKRD 589
Query: 1294 YTRHEEIPPPRSRAAVDYPSRFPPXXXXXXXXXXXXXXXXXS------TARPATRRAYAD 1133
Y+R E+IPPPRSR AVDY SR T+R A RR Y D
Sbjct: 590 YSRREDIPPPRSRVAVDYGSRVASERRPSYRDYPARGPGPGYSELPRSTSRAAPRRGYVD 649
Query: 1132 DGYEKRFERPPP------AYREGRGREYDSMSGSKRPYSAMDDVPLPYAEAGTRPSRSRL 971
DGY +RFERPPP +YREGR R+Y+++SGSKR Y+A+DDVP YA+ G R SR+RL
Sbjct: 650 DGYSQRFERPPPPPPPHLSYREGRPRDYETLSGSKRAYAAIDDVPPRYADTGARQSRARL 709
Query: 970 DYELGGASGTQYGD-YSDXXXXXXXXXXXXXXXXXXGQDSH 851
DY+ GG S +QYGD Y D GQDSH
Sbjct: 710 DYDYGG-SASQYGDAYGDRLGRSSMGYGGSSRSSMSGQDSH 749
>gb|EXB38373.1| Heterogeneous nuclear ribonucleoprotein Q [Morus notabilis]
Length = 791
Score = 221 bits (564), Expect = 5e-55
Identities = 134/257 (52%), Positives = 155/257 (60%), Gaps = 17/257 (6%)
Frame = -2
Query: 1639 ELGEGDKKVKVRARLSRPLQRGRGRYGAR-DLRPRHGP----PAPWGXXXXXXXXXXXXX 1475
ELGEG K KVRARLSRPLQ+G+GR+ AR D R G W
Sbjct: 452 ELGEGGNKAKVRARLSRPLQKGKGRHVARGDFRSSRGSGRVVKGSWSHPSPRSLPMRGLR 511
Query: 1474 VS-THFPPRADRSFKRPVAMRDRRPVMAVAPRGRPVAPLSSRSYDRRPPVTSYPKSHFKR 1298
+ + PP S KRP RDRRPVM+V R RP+AP +RSYDRR PV+SYPKS KR
Sbjct: 512 GAGSRIPPP---SVKRPAGFRDRRPVMSVPVRARPLAP-PARSYDRRAPVSSYPKSSLKR 567
Query: 1297 EYTRHEEIPPPRSRAAVDYPSRF-----PPXXXXXXXXXXXXXXXXXSTARPATRRAYAD 1133
EY+R +EI PPRSRA DY SR P ST+R + RRAY D
Sbjct: 568 EYSRRDEILPPRSRAVADYGSRVVHERRPSYRDDYSSRASGYSDPPRSTSRTSARRAYVD 627
Query: 1132 DGYEKRFERPPP-----AYREGRGREYDSMSGSKRPYSAMDDVPLPYAEAGTRPSRSRLD 968
DGY RFERPPP +YREGR R+YDS+SGSKRPYS+MDDVP YA+A R SR+RLD
Sbjct: 628 DGYGPRFERPPPPPPPPSYREGRARDYDSVSGSKRPYSSMDDVPPRYADASVRQSRARLD 687
Query: 967 YELGGASGTQYGD-YSD 920
YE G+ G+ YGD Y D
Sbjct: 688 YEY-GSGGSHYGDAYGD 703
>ref|XP_004307249.1| PREDICTED: uncharacterized protein LOC101302396 [Fragaria vesca
subsp. vesca]
Length = 801
Score = 220 bits (561), Expect = 1e-54
Identities = 135/263 (51%), Positives = 162/263 (61%), Gaps = 23/263 (8%)
Frame = -2
Query: 1639 ELGEGDKKVKVRARLSRPLQRGRGRY-GARDLRPRHGPPAPWGXXXXXXXXXXXXXVSTH 1463
E+GEGD K K+RARLSRPLQRG+G++ G D R +P G
Sbjct: 459 EIGEGDNKAKLRARLSRPLQRGKGKHVGRGDYR------SPRGDGRAIRGSWGRPTPPRS 512
Query: 1462 FPPRADR---------SFKRPVAMRDRRPVMAVAP-RGRPVAPLSSRSYDRRPPVTSYPK 1313
P R R S KRPVA+RDRRP+++ P R RP+ P +RSYDRRPPV +YPK
Sbjct: 513 LPVRGLRGVGSRIPSTSVKRPVALRDRRPMVSSYPARARPLPP-PARSYDRRPPVPTYPK 571
Query: 1312 SHFKREYTRHEEIPPPRSRAAVDYPSRFPP-----XXXXXXXXXXXXXXXXXSTARPATR 1148
S F+REY+R +++PPPRSRA DY SR P ST+R TR
Sbjct: 572 SSFRREYSRRDDLPPPRSRAVADYGSRAVPERRQSYRDEYSTRGPAYVDPPRSTSRSTTR 631
Query: 1147 RAYADDGYEKRFER-----PPPAY-REGRGREYDSMSGSKRPYSAMDDVPLPYAEAGTRP 986
RAY DDGY +RFER PPP+Y REGR R+YDS+SGSKRPYSA+DDVP YA+AG R
Sbjct: 632 RAYVDDGYGQRFERHPPPPPPPSYHREGRARDYDSISGSKRPYSALDDVPPRYADAGIRQ 691
Query: 985 SRSRLDYELGGASGTQYGD-YSD 920
SR+RLDYE G S +QYGD YSD
Sbjct: 692 SRARLDYEYGSGS-SQYGDGYSD 713
>ref|XP_002526479.1| RNA binding protein, putative [Ricinus communis]
gi|223534154|gb|EEF35870.1| RNA binding protein, putative
[Ricinus communis]
Length = 784
Score = 218 bits (556), Expect = 5e-54
Identities = 132/250 (52%), Positives = 154/250 (61%), Gaps = 10/250 (4%)
Frame = -2
Query: 1639 ELGEGDKKVKVRARLSRPLQRGRGRYGAR-DLRPRHGPPAPWGXXXXXXXXXXXXXVSTH 1463
ELGEGD K KVRARLSRPLQRG+G++ +R D R +G G T
Sbjct: 455 ELGEGDNKAKVRARLSRPLQRGKGKHASRADFRSWYGGRTARGPWVRPVRGIASRAAPT- 513
Query: 1462 FPPRADRSFKRPVAMRDRRP-VMAVAPRGRPVAPLSSRSYDRRPPVTSYPKSHFKREYTR 1286
S KR V +RDRRP VM++ RGRP+ P +R+YDRR P SYPKS KR+Y R
Sbjct: 514 -------SVKRHVGLRDRRPPVMSMPVRGRPLPP-PNRTYDRRAPAPSYPKSSLKRDYGR 565
Query: 1285 HEEIPPPRSRAAVDYPSRF-----PPXXXXXXXXXXXXXXXXXSTARPATRRAYADDGYE 1121
EE+PPPRSRA VDY SR T+R + RRAY DDGY
Sbjct: 566 REELPPPRSRAPVDYSSRSVAERRQSYRDDYSSRGSGYSDIPRGTSRSSARRAYVDDGYG 625
Query: 1120 KRFERPPPAYREGRGREYDSMSGSKRPYSAMDDVPLPYAE--AGTRPSRSRLDYELGGAS 947
+R ER PP+YREGR R+YDS+SGSKRPYSAMDDVP YA+ AGTR SR+RLDYEL G S
Sbjct: 626 QRLERHPPSYREGRARDYDSISGSKRPYSAMDDVPPRYADGGAGTRHSRARLDYEL-GPS 684
Query: 946 GTQYGD-YSD 920
+QYGD Y D
Sbjct: 685 ASQYGDAYGD 694