BLASTX nr result
ID: Atropa21_contig00003915
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00003915
(578 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006345371.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 224 1e-56
ref|XP_004229170.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 220 2e-55
ref|XP_002513114.1| conserved hypothetical protein [Ricinus comm... 70 4e-10
gb|EXC10458.1| Ubiquitin carboxyl-terminal hydrolase 24 [Morus n... 62 1e-07
gb|EOY17597.1| Ubiquitin-specific protease 24 isoform 3 [Theobro... 57 5e-06
gb|EOY17596.1| Ubiquitin-specific protease 24 isoform 2 [Theobro... 57 5e-06
gb|EOY17595.1| Ubiquitin-specific protease 24 isoform 1 [Theobro... 57 5e-06
gb|EMJ08946.1| hypothetical protein PRUPE_ppb017241mg, partial [... 56 6e-06
ref|XP_002303905.2| hypothetical protein POPTR_0003s20160g [Popu... 56 8e-06
ref|XP_002303904.1| predicted protein [Populus trichocarpa] 56 8e-06
>ref|XP_006345371.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like [Solanum
tuberosum]
Length = 533
Score = 224 bits (572), Expect = 1e-56
Identities = 117/151 (77%), Positives = 128/151 (84%)
Frame = -2
Query: 484 MSDPKVFVFGSFTEDETKSMLNQPSGCDGNKHVEEKVLVNPSKFVPDLSFGSFSAVSDSQ 305
MSD KVF+FGSFTEDETKS+LNQPSGCDGNKHVEEKV VN SK PD SFGSF+AVS+SQ
Sbjct: 1 MSDSKVFLFGSFTEDETKSLLNQPSGCDGNKHVEEKVPVNSSKSEPDFSFGSFNAVSNSQ 60
Query: 304 PGSSREKVGSDSSTTRKEQKAGHKKPEAGNLPREIKQNGDVHSNYYINGHEGSAMVHNID 125
P S+E+VGSDSSTT KE+KAG A NL REIKQNGDVH++YYINGHE SAMVHNID
Sbjct: 61 PAYSKERVGSDSSTTLKEEKAG-----ADNLLREIKQNGDVHNDYYINGHEESAMVHNID 115
Query: 124 FSNLRVSEDEGKAINKLSCTTGQNDDALLNK 32
SNL V ED KAINKLS TTG++DDALLNK
Sbjct: 116 LSNLCVLEDGPKAINKLSRTTGRDDDALLNK 146
>ref|XP_004229170.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like [Solanum
lycopersicum]
Length = 533
Score = 220 bits (560), Expect = 2e-55
Identities = 113/151 (74%), Positives = 126/151 (83%)
Frame = -2
Query: 484 MSDPKVFVFGSFTEDETKSMLNQPSGCDGNKHVEEKVLVNPSKFVPDLSFGSFSAVSDSQ 305
MSD K+F+FGSFTEDETKS+LNQPSGCDGNKHVEEKV VN S+ P SFGSF AVS+SQ
Sbjct: 1 MSDSKIFLFGSFTEDETKSLLNQPSGCDGNKHVEEKVPVNSSESEPGFSFGSFGAVSNSQ 60
Query: 304 PGSSREKVGSDSSTTRKEQKAGHKKPEAGNLPREIKQNGDVHSNYYINGHEGSAMVHNID 125
P SS+E+VGSDSSTT KE+KAG A NL REI QNGDVH++YYINGHE SAM HNID
Sbjct: 61 PASSKERVGSDSSTTLKEEKAG-----ADNLLREINQNGDVHNDYYINGHEESAMAHNID 115
Query: 124 FSNLRVSEDEGKAINKLSCTTGQNDDALLNK 32
SNL V EDE KAINKLS TTG++DDALL+K
Sbjct: 116 LSNLCVLEDEAKAINKLSRTTGRDDDALLSK 146
>ref|XP_002513114.1| conserved hypothetical protein [Ricinus communis]
gi|223548125|gb|EEF49617.1| conserved hypothetical
protein [Ricinus communis]
Length = 605
Score = 70.1 bits (170), Expect = 4e-10
Identities = 52/139 (37%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Frame = -2
Query: 469 VFVFGSFTEDETKSMLNQPSGCDGNKHVEEKVLVNPS-KFVPDLSFGSFSAVSDSQPGSS 293
V VFGSFTEDETKS S + K V++K L S F ++FG FS+ S QPGS+
Sbjct: 89 VLVFGSFTEDETKSWQANKSSENDKKPVQKKELQFGSLNFATGITFGDFSSESSRQPGST 148
Query: 292 REKVGSDSSTTRKEQK----AGHKKPEAGNLPREIKQNGDV----HSNYYINGHEGSAMV 137
KV S+ K++K A + +P P KQNG + HS NG +G
Sbjct: 149 NGKVSFQSTNPHKKEKDVKIAINPEPSVLGSP---KQNGSIADITHSVTLANGVKG-LKT 204
Query: 136 HNIDFSNLRVSEDEGKAIN 80
++D ++L +S++E IN
Sbjct: 205 ESLDLASLHLSQNEDSPIN 223
>gb|EXC10458.1| Ubiquitin carboxyl-terminal hydrolase 24 [Morus notabilis]
Length = 564
Score = 62.0 bits (149), Expect = 1e-07
Identities = 46/122 (37%), Positives = 62/122 (50%), Gaps = 4/122 (3%)
Frame = -2
Query: 469 VFVFGSFTEDETKSMLNQPSGCDGNKHVEEKVLVNPSKFVPDLSFGSFSAVSDSQPGSSR 290
VF+FGSFTEDETKS+L S +G K VE+KV L FGS + S+ G +
Sbjct: 36 VFLFGSFTEDETKSLLRAQSSKNGEKAVEKKV----------LQFGSLNFDSEQSFGGPK 85
Query: 289 EKVGSDSSTTRKEQKAGHKKP----EAGNLPREIKQNGDVHSNYYINGHEGSAMVHNIDF 122
+D+S+T ++ K H KP + N+ + K DVH+ NGH A H
Sbjct: 86 ---STDTSSTDQKGKPQHAKPLDSLKKDNVVKSAKTAQDVHNLPKENGHAHVA-THGFQG 141
Query: 121 SN 116
SN
Sbjct: 142 SN 143
>gb|EOY17597.1| Ubiquitin-specific protease 24 isoform 3 [Theobroma cacao]
Length = 549
Score = 56.6 bits (135), Expect = 5e-06
Identities = 45/153 (29%), Positives = 78/153 (50%), Gaps = 5/153 (3%)
Frame = -2
Query: 484 MSDPKVFVFGSFTEDETKSMLNQPSGCDGNKHVEEKVLVNPS-KFVPDLSFGSFSAVSDS 308
M+D KVF+FGSF+EDET+S+L++ S + K V++K L + S F S G + +
Sbjct: 1 MTDSKVFLFGSFSEDETRSLLSKRSAGNAEKPVQKKELQSGSLNFAAGGSLGGANGDLSN 60
Query: 307 QPGSSREKVGSDSSTT----RKEQKAGHKKPEAGNLPREIKQNGDVHSNYYINGHEGSAM 140
+P S+ VG SST+ RK K+ + + K+NG S +E S++
Sbjct: 61 KPSSTNRPVGFLSSTSPIADRKSIKSA--RDHTSTTLQTPKENGTTKST-----NESSSL 113
Query: 139 VHNIDFSNLRVSEDEGKAINKLSCTTGQNDDAL 41
+ I N++ ++ +++ C + N +L
Sbjct: 114 SNGIKQLNVKSTDVTSLHLSQNDCGSLNNFQSL 146
>gb|EOY17596.1| Ubiquitin-specific protease 24 isoform 2 [Theobroma cacao]
Length = 606
Score = 56.6 bits (135), Expect = 5e-06
Identities = 45/153 (29%), Positives = 78/153 (50%), Gaps = 5/153 (3%)
Frame = -2
Query: 484 MSDPKVFVFGSFTEDETKSMLNQPSGCDGNKHVEEKVLVNPS-KFVPDLSFGSFSAVSDS 308
M+D KVF+FGSF+EDET+S+L++ S + K V++K L + S F S G + +
Sbjct: 1 MTDSKVFLFGSFSEDETRSLLSKRSAGNAEKPVQKKELQSGSLNFAAGGSLGGANGDLSN 60
Query: 307 QPGSSREKVGSDSSTT----RKEQKAGHKKPEAGNLPREIKQNGDVHSNYYINGHEGSAM 140
+P S+ VG SST+ RK K+ + + K+NG S +E S++
Sbjct: 61 KPSSTNRPVGFLSSTSPIADRKSIKSA--RDHTSTTLQTPKENGTTKST-----NESSSL 113
Query: 139 VHNIDFSNLRVSEDEGKAINKLSCTTGQNDDAL 41
+ I N++ ++ +++ C + N +L
Sbjct: 114 SNGIKQLNVKSTDVTSLHLSQNDCGSLNNFQSL 146
>gb|EOY17595.1| Ubiquitin-specific protease 24 isoform 1 [Theobroma cacao]
Length = 548
Score = 56.6 bits (135), Expect = 5e-06
Identities = 45/153 (29%), Positives = 78/153 (50%), Gaps = 5/153 (3%)
Frame = -2
Query: 484 MSDPKVFVFGSFTEDETKSMLNQPSGCDGNKHVEEKVLVNPS-KFVPDLSFGSFSAVSDS 308
M+D KVF+FGSF+EDET+S+L++ S + K V++K L + S F S G + +
Sbjct: 1 MTDSKVFLFGSFSEDETRSLLSKRSAGNAEKPVQKKELQSGSLNFAAGGSLGGANGDLSN 60
Query: 307 QPGSSREKVGSDSSTT----RKEQKAGHKKPEAGNLPREIKQNGDVHSNYYINGHEGSAM 140
+P S+ VG SST+ RK K+ + + K+NG S +E S++
Sbjct: 61 KPSSTNRPVGFLSSTSPIADRKSIKSA--RDHTSTTLQTPKENGTTKST-----NESSSL 113
Query: 139 VHNIDFSNLRVSEDEGKAINKLSCTTGQNDDAL 41
+ I N++ ++ +++ C + N +L
Sbjct: 114 SNGIKQLNVKSTDVTSLHLSQNDCGSLNNFQSL 146
>gb|EMJ08946.1| hypothetical protein PRUPE_ppb017241mg, partial [Prunus persica]
Length = 236
Score = 56.2 bits (134), Expect = 6e-06
Identities = 50/158 (31%), Positives = 75/158 (47%), Gaps = 14/158 (8%)
Frame = -2
Query: 484 MSDPKVFVFGSFTEDETKSMLNQPSGCDGNKHVEEKVLVNPS-KFVPDLSFGSFSAVSDS 308
MSD K+FVFGSF+EDET+S+L + S K +E+ VL S FV +S G + S S
Sbjct: 14 MSDSKLFVFGSFSEDETRSLLQKQSPGKAEKPLEKNVLQFGSINFVTKISSGECNGES-S 72
Query: 307 QPGSSREKVG--SDSSTTRKEQKAGHKKPEAGNLPREIK-----------QNGDVHSNYY 167
+P +S + + S+ K + K +LP + +NG HSN
Sbjct: 73 RPQNSVKGLSKVQPLSSLNKPNEVEAVKAANDSLPASLTTPTENGCTDNYKNGSAHSNGV 132
Query: 166 INGHEGSAMVHNIDFSNLRVSEDEGKAINKLSCTTGQN 53
A + N+D ++L +S + G N+ S QN
Sbjct: 133 T-----EATMDNLDVASLPLSNNAGGLSNQFSSLELQN 165
>ref|XP_002303905.2| hypothetical protein POPTR_0003s20160g [Populus trichocarpa]
gi|550343601|gb|EEE78884.2| hypothetical protein
POPTR_0003s20160g [Populus trichocarpa]
Length = 543
Score = 55.8 bits (133), Expect = 8e-06
Identities = 44/136 (32%), Positives = 68/136 (50%), Gaps = 6/136 (4%)
Frame = -2
Query: 484 MSDPK-VFVFGSFTEDETKSMLNQPSGCDGNKHVEE-KVLVNPSKFVPDLSFGSFSAVSD 311
MSD K V VFGSFTEDETKS+L + S K VE+ ++ F ++FG+F +
Sbjct: 1 MSDSKKVLVFGSFTEDETKSLLGKQSPGKVEKPVEKIELRFGSLNFGTGITFGNFDTTLN 60
Query: 310 SQPGSSREKVGSDSSTTRKEQKAGHKKPEAGNLPREIKQNGDV----HSNYYINGHEGSA 143
+Q S+ V S S + ++K E + ++NG + H + NG +
Sbjct: 61 TQLASANGNVTSQSKSLVMKEKDVKVAKEGDGVLGSPRENGSIGNSNHGSSLSNGVD-VL 119
Query: 142 MVHNIDFSNLRVSEDE 95
+ID ++L +SE E
Sbjct: 120 KTESIDLTSLHLSEKE 135
>ref|XP_002303904.1| predicted protein [Populus trichocarpa]
Length = 231
Score = 55.8 bits (133), Expect = 8e-06
Identities = 44/136 (32%), Positives = 68/136 (50%), Gaps = 6/136 (4%)
Frame = -2
Query: 484 MSDPK-VFVFGSFTEDETKSMLNQPSGCDGNKHVEE-KVLVNPSKFVPDLSFGSFSAVSD 311
MSD K V VFGSFTEDETKS+L + S K VE+ ++ F ++FG+F +
Sbjct: 1 MSDSKKVLVFGSFTEDETKSLLGKQSPGKVEKPVEKIELRFGSLNFGTGITFGNFDTTLN 60
Query: 310 SQPGSSREKVGSDSSTTRKEQKAGHKKPEAGNLPREIKQNGDV----HSNYYINGHEGSA 143
+Q S+ V S S + ++K E + ++NG + H + NG +
Sbjct: 61 TQLASANGNVTSQSKSLVMKEKDVKVAKEGDGVLGSPRENGSIGNSNHGSSLSNGVD-VL 119
Query: 142 MVHNIDFSNLRVSEDE 95
+ID ++L +SE E
Sbjct: 120 KTESIDLTSLHLSEKE 135