BLASTX nr result

ID: Atropa21_contig00003912 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00003912
         (502 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24890.3| unnamed protein product [Vitis vinifera]               97   2e-18
emb|CBI27147.3| unnamed protein product [Vitis vinifera]               96   5e-18
gb|EOX99126.1| Zinc-binding ribosomal family protein [Theobroma ...    96   6e-18
ref|XP_006296742.1| hypothetical protein CARUB_v10014940mg, part...    94   2e-17
gb|EMT31623.1| 60S ribosomal protein L36a [Aegilops tauschii]          94   2e-17
gb|AAK94425.1|AF398144_1 60S ribosomal protein L144 [Brassica ra...    94   2e-17
gb|EMT00491.1| 60S ribosomal protein L36a [Aegilops tauschii]          93   3e-17
gb|EOY27446.1| Zinc-binding ribosomal protein family protein [Th...    93   4e-17
ref|XP_006282742.1| hypothetical protein CARUB_v10005895mg [Caps...    93   4e-17
gb|EMJ11007.1| hypothetical protein PRUPE_ppa014062mg [Prunus pe...    93   4e-17
gb|EMJ11006.1| hypothetical protein PRUPE_ppa014062mg [Prunus pe...    93   4e-17
ref|XP_004241547.1| PREDICTED: 60S ribosomal protein L44-like [S...    93   4e-17
ref|XP_004148567.1| PREDICTED: 60S ribosomal protein L44-like [C...    93   4e-17
ref|XP_004236215.1| PREDICTED: 60S ribosomal protein L44-like [S...    93   4e-17
ref|NP_001274987.1| 60S ribosomal protein L44-like [Solanum tube...    93   4e-17
ref|XP_002278981.1| PREDICTED: 60S ribosomal protein L44-like [V...    93   4e-17
ref|XP_002278803.2| PREDICTED: 60S ribosomal protein L44-like [V...    93   4e-17
ref|XP_002463551.1| hypothetical protein SORBIDRAFT_01g001840 [S...    93   4e-17
ref|XP_002310076.1| hypothetical protein POPTR_0007s07730g [Popu...    93   4e-17
ref|XP_002306382.1| hypothetical protein POPTR_0005s09520g [Popu...    93   4e-17

>emb|CBI24890.3| unnamed protein product [Vitis vinifera]
          Length = 140

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 50/71 (70%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
 Frame = +3

Query: 45  LPFLSHSP-PATMVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLAAQGKRRYDRKQS 221
           L F  H P P  MVNVP              HTLHKVTQYKKGKDSLAAQGKRRYDRKQS
Sbjct: 24  LSFSLHPPKPPKMVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQS 83

Query: 222 GYGGQTKPVFH 254
           GYGGQTKPVFH
Sbjct: 84  GYGGQTKPVFH 94


>emb|CBI27147.3| unnamed protein product [Vitis vinifera]
          Length = 314

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 48/69 (69%), Positives = 48/69 (69%)
 Frame = +3

Query: 48  PFLSHSPPATMVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGY 227
           P  S     TMVNVP              HTLHKVTQYKKGKDSLAAQGKRRYDRKQSGY
Sbjct: 200 PNFSREFSVTMVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGY 259

Query: 228 GGQTKPVFH 254
           GGQTKPVFH
Sbjct: 260 GGQTKPVFH 268


>gb|EOX99126.1| Zinc-binding ribosomal family protein [Theobroma cacao]
          Length = 170

 Score = 95.5 bits (236), Expect = 6e-18
 Identities = 48/66 (72%), Positives = 48/66 (72%)
 Frame = +3

Query: 57  SHSPPATMVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQ 236
           S S  A MVNVP              HTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQ
Sbjct: 59  SLSSSAAMVNVPKTKKTYCKSKDCRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQ 118

Query: 237 TKPVFH 254
           TKPVFH
Sbjct: 119 TKPVFH 124


>ref|XP_006296742.1| hypothetical protein CARUB_v10014940mg, partial [Capsella rubella]
           gi|482565451|gb|EOA29640.1| hypothetical protein
           CARUB_v10014940mg, partial [Capsella rubella]
          Length = 121

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 45/61 (73%), Positives = 46/61 (75%)
 Frame = +3

Query: 72  ATMVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVF 251
           A MVN+P              HTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVF
Sbjct: 15  AKMVNIPKTKNTYCKNKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVF 74

Query: 252 H 254
           H
Sbjct: 75  H 75


>gb|EMT31623.1| 60S ribosomal protein L36a [Aegilops tauschii]
          Length = 132

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 47/68 (69%), Positives = 48/68 (70%)
 Frame = +3

Query: 51  FLSHSPPATMVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYG 230
           FL     AT VNVP              HTLHKVTQYKKGKDSL+AQGKRRYDRKQSGYG
Sbjct: 19  FLLEDHFATAVNVPKTKKTYCKNKECKKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYG 78

Query: 231 GQTKPVFH 254
           GQTKPVFH
Sbjct: 79  GQTKPVFH 86


>gb|AAK94425.1|AF398144_1 60S ribosomal protein L144 [Brassica rapa subsp. pekinensis]
          Length = 119

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 45/61 (73%), Positives = 46/61 (75%)
 Frame = +3

Query: 72  ATMVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVF 251
           A MVN+P              HTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVF
Sbjct: 13  AKMVNIPKTKKTYCKNKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVF 72

Query: 252 H 254
           H
Sbjct: 73  H 73


>gb|EMT00491.1| 60S ribosomal protein L36a [Aegilops tauschii]
          Length = 495

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 45/63 (71%), Positives = 46/63 (73%)
 Frame = +3

Query: 66  PPATMVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKP 245
           P A  VNVP              HTLHKVTQYKKGKDSL+AQGKRRYDRKQSGYGGQTKP
Sbjct: 374 PAAVKVNVPKTKKTYCKNKECKKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKP 433

Query: 246 VFH 254
           VFH
Sbjct: 434 VFH 436


>gb|EOY27446.1| Zinc-binding ribosomal protein family protein [Theobroma cacao]
          Length = 105

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 45/59 (76%), Positives = 45/59 (76%)
 Frame = +3

Query: 78  MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFH 254
           MVNVP              HTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFH
Sbjct: 1   MVNVPKTKKTYCKNKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFH 59


>ref|XP_006282742.1| hypothetical protein CARUB_v10005895mg [Capsella rubella]
           gi|482551447|gb|EOA15640.1| hypothetical protein
           CARUB_v10005895mg [Capsella rubella]
          Length = 169

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 54/124 (43%), Positives = 64/124 (51%), Gaps = 4/124 (3%)
 Frame = +3

Query: 78  MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHX 257
           MVN+P              HTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFH 
Sbjct: 1   MVNIPKTKNTYCKNKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK 60

Query: 258 XXXXXXXIXXXXXXXXXXXXEPLFSRLLVKQSLIFL----LCSVILFRYFCYIECSSGVS 425
                  I                 ++++ ++        L SV++  Y C   C  G S
Sbjct: 61  KAKTTKKIVLRLQCQSCKHFSQRPIKVMMSETFFIFVKHSLLSVLILTYLCVGFC-RGAS 119

Query: 426 VIDS 437
            + S
Sbjct: 120 TLRS 123


>gb|EMJ11007.1| hypothetical protein PRUPE_ppa014062mg [Prunus persica]
          Length = 88

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 45/59 (76%), Positives = 45/59 (76%)
 Frame = +3

Query: 78  MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFH 254
           MVNVP              HTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFH
Sbjct: 1   MVNVPKTNKTHCKSKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFH 59


>gb|EMJ11006.1| hypothetical protein PRUPE_ppa014062mg [Prunus persica]
          Length = 84

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 45/59 (76%), Positives = 45/59 (76%)
 Frame = +3

Query: 78  MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFH 254
           MVNVP              HTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFH
Sbjct: 1   MVNVPKTNKTHCKSKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFH 59


>ref|XP_004241547.1| PREDICTED: 60S ribosomal protein L44-like [Solanum lycopersicum]
          Length = 105

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 45/59 (76%), Positives = 45/59 (76%)
 Frame = +3

Query: 78  MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFH 254
           MVNVP              HTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFH
Sbjct: 1   MVNVPKTKKTYCKSKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFH 59


>ref|XP_004148567.1| PREDICTED: 60S ribosomal protein L44-like [Cucumis sativus]
           gi|449524244|ref|XP_004169133.1| PREDICTED: 60S
           ribosomal protein L44-like [Cucumis sativus]
          Length = 116

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 45/59 (76%), Positives = 45/59 (76%)
 Frame = +3

Query: 78  MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFH 254
           MVNVP              HTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFH
Sbjct: 1   MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFH 59


>ref|XP_004236215.1| PREDICTED: 60S ribosomal protein L44-like [Solanum lycopersicum]
           gi|470114925|ref|XP_004293655.1| PREDICTED: 60S
           ribosomal protein L44-like [Fragaria vesca subsp. vesca]
           gi|470127096|ref|XP_004299513.1| PREDICTED: 60S
           ribosomal protein L44-like [Fragaria vesca subsp. vesca]
           gi|565355027|ref|XP_006344406.1| PREDICTED: 60S
           ribosomal protein L44-like [Solanum tuberosum]
           gi|565361411|ref|XP_006347450.1| PREDICTED: 60S
           ribosomal protein L44-like [Solanum tuberosum]
           gi|170920|gb|AAA34366.1| ribosomal protein L41 [Candida
           maltosa]
          Length = 105

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 45/59 (76%), Positives = 45/59 (76%)
 Frame = +3

Query: 78  MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFH 254
           MVNVP              HTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFH
Sbjct: 1   MVNVPKTKKTYCKSKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFH 59


>ref|NP_001274987.1| 60S ribosomal protein L44-like [Solanum tuberosum]
           gi|82621114|gb|ABB86245.1| ribosomal protein L41-like
           [Solanum tuberosum]
          Length = 105

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 45/59 (76%), Positives = 45/59 (76%)
 Frame = +3

Query: 78  MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFH 254
           MVNVP              HTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFH
Sbjct: 1   MVNVPKTKKTYCKSKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFH 59


>ref|XP_002278981.1| PREDICTED: 60S ribosomal protein L44-like [Vitis vinifera]
           gi|255543771|ref|XP_002512948.1| 60S ribosomal protein
           L44 [Ricinus communis] gi|449436355|ref|XP_004135958.1|
           PREDICTED: 60S ribosomal protein L44-like [Cucumis
           sativus] gi|449461677|ref|XP_004148568.1| PREDICTED: 60S
           ribosomal protein L44-like [Cucumis sativus]
           gi|449488799|ref|XP_004158175.1| PREDICTED: 60S
           ribosomal protein L44-like [Cucumis sativus]
           gi|449524246|ref|XP_004169134.1| PREDICTED: 60S
           ribosomal protein L44-like [Cucumis sativus]
           gi|567900792|ref|XP_006442884.1| hypothetical protein
           CICLE_v10022990mg [Citrus clementina]
           gi|568850180|ref|XP_006478803.1| PREDICTED: 60S
           ribosomal protein L44-like [Citrus sinensis]
           gi|2500380|sp|Q96499.3|RL44_GOSHI RecName: Full=60S
           ribosomal protein L44 gi|1553129|gb|AAB08726.1|
           ribosomal protein L44 isoform a [Gossypium hirsutum]
           gi|1553131|gb|AAB08727.1| ribosomal protein L44 isoform
           b [Gossypium hirsutum] gi|223547959|gb|EEF49451.1| 60S
           ribosomal protein L44 [Ricinus communis]
           gi|557545146|gb|ESR56124.1| hypothetical protein
           CICLE_v10022990mg [Citrus clementina]
          Length = 105

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 45/59 (76%), Positives = 45/59 (76%)
 Frame = +3

Query: 78  MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFH 254
           MVNVP              HTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFH
Sbjct: 1   MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFH 59


>ref|XP_002278803.2| PREDICTED: 60S ribosomal protein L44-like [Vitis vinifera]
          Length = 190

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 45/59 (76%), Positives = 45/59 (76%)
 Frame = +3

Query: 78  MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFH 254
           MVNVP              HTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFH
Sbjct: 1   MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFH 59



 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 44/58 (75%), Positives = 44/58 (75%)
 Frame = +3

Query: 81  VNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFH 254
           VNVP              HTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFH
Sbjct: 87  VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFH 144


>ref|XP_002463551.1| hypothetical protein SORBIDRAFT_01g001840 [Sorghum bicolor]
           gi|241917405|gb|EER90549.1| hypothetical protein
           SORBIDRAFT_01g001840 [Sorghum bicolor]
          Length = 105

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 45/59 (76%), Positives = 45/59 (76%)
 Frame = +3

Query: 78  MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFH 254
           MVNVP              HTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFH
Sbjct: 1   MVNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFH 59


>ref|XP_002310076.1| hypothetical protein POPTR_0007s07730g [Populus trichocarpa]
           gi|224113271|ref|XP_002316442.1| 60S ribosomal protein
           L36a/L44 [Populus trichocarpa]
           gi|118484797|gb|ABK94266.1| unknown [Populus
           trichocarpa] gi|118487919|gb|ABK95781.1| unknown
           [Populus trichocarpa] gi|222852979|gb|EEE90526.1|
           hypothetical protein POPTR_0007s07730g [Populus
           trichocarpa] gi|222865482|gb|EEF02613.1| 60S ribosomal
           protein L36a/L44 [Populus trichocarpa]
          Length = 105

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 45/59 (76%), Positives = 45/59 (76%)
 Frame = +3

Query: 78  MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFH 254
           MVNVP              HTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFH
Sbjct: 1   MVNVPKTKKTYCKNKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFH 59


>ref|XP_002306382.1| hypothetical protein POPTR_0005s09520g [Populus trichocarpa]
           gi|118482179|gb|ABK93019.1| unknown [Populus
           trichocarpa] gi|222855831|gb|EEE93378.1| hypothetical
           protein POPTR_0005s09520g [Populus trichocarpa]
          Length = 105

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 45/59 (76%), Positives = 45/59 (76%)
 Frame = +3

Query: 78  MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFH 254
           MVNVP              HTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFH
Sbjct: 1   MVNVPKTKKTYCKNKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFH 59


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