BLASTX nr result

ID: Atropa21_contig00003844 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00003844
         (704 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006359664.1| PREDICTED: translocase of chloroplast 120, c...   228   2e-57
ref|XP_004231012.1| PREDICTED: translocase of chloroplast 120, c...   216   7e-54
ref|XP_006362716.1| PREDICTED: translocase of chloroplast 120, c...   113   7e-23

>ref|XP_006359664.1| PREDICTED: translocase of chloroplast 120, chloroplastic-like isoform
            X1 [Solanum tuberosum] gi|565387779|ref|XP_006359665.1|
            PREDICTED: translocase of chloroplast 120,
            chloroplastic-like isoform X2 [Solanum tuberosum]
          Length = 1369

 Score =  228 bits (580), Expect = 2e-57
 Identities = 137/240 (57%), Positives = 151/240 (62%), Gaps = 6/240 (2%)
 Frame = +1

Query: 1    EPVNGSNTDEQQIDGPDNDAVSTLQGGSSPLKAEVTEKESTGPEPIASEYMVEQKDILSS 180
            EP+N SN DEQQIDG DND+VS LQGG  P+KAEVTEKESTGPE             L  
Sbjct: 436  EPINISNKDEQQIDGSDNDSVSILQGGHFPVKAEVTEKESTGPE-------------LMG 482

Query: 181  DATDHQGLKLNESPTVGPGNLNDRTSEQKNVSVSGTSASENHTG------TTAEEERSKS 342
            DATD QGLKLNESPT+ PGNLNDRT+EQK+VSVS +SAS NHTG       TA++E SKS
Sbjct: 483  DATDDQGLKLNESPTMEPGNLNDRTNEQKDVSVSDSSASVNHTGISVRGRVTADDEMSKS 542

Query: 343  SEALPSDNHEKVSKVSQDAGAGVDXXXXXXXXXXXXXEDLKQSVSKVTEPEXXXXXXXXX 522
            SEALPSDNHEKVSKVSQDAG GV+             + LKQSV +V EPE         
Sbjct: 543  SEALPSDNHEKVSKVSQDAGVGVE-KVAEKESVSVVVKGLKQSVPRVREPE---ARSATE 598

Query: 523  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVQQPRVNGTASPAQNQIVEESTHGEADEY 702
                                          VVQQPRVNGTASPAQNQ+VEEST+GEADEY
Sbjct: 599  HPSSSNASATRIPAPAGLGRAAPLLEPAPRVVQQPRVNGTASPAQNQLVEESTNGEADEY 658


>ref|XP_004231012.1| PREDICTED: translocase of chloroplast 120, chloroplastic-like
            [Solanum lycopersicum]
          Length = 1366

 Score =  216 bits (549), Expect = 7e-54
 Identities = 133/248 (53%), Positives = 149/248 (60%), Gaps = 14/248 (5%)
 Frame = +1

Query: 1    EPVNGSNTDEQQIDGPDNDAVSTLQGGSSPLKAEVTEKESTGPEPIASEYMVEQKDILSS 180
            EP+N +N DEQQID  DND+VS LQGG  PLKAEVTEKESTGPE             L  
Sbjct: 424  EPINCTNKDEQQIDDQDNDSVSILQGGHFPLKAEVTEKESTGPE-------------LMG 470

Query: 181  DATDHQGLKLNESPTVGPGNLNDRTSEQKNVSVSGTSASENHTG------TTAEEERSKS 342
            DA+DHQGLKLNESPT+ PGNLNDRT+EQK+VSVS +SAS NH+G       TA++E SKS
Sbjct: 471  DASDHQGLKLNESPTMEPGNLNDRTNEQKDVSVSDSSASLNHSGISVRGKVTADDEMSKS 530

Query: 343  SEALPSDNHEKVSKVSQDAGAGVD--------XXXXXXXXXXXXXEDLKQSVSKVTEPEX 498
            SEALPSDN+EKVSKVSQDA  GVD                     +DLKQSV +V E E 
Sbjct: 531  SEALPSDNNEKVSKVSQDAVVGVDKVVEKESVDKVIEKEPVSVVVKDLKQSVPRVRESE- 589

Query: 499  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVQQPRVNGTASPAQNQIVEES 678
                                                  VVQQPRVNGTASP QNQ+VEES
Sbjct: 590  --ARSATEHPSSSNASATRIPAPAGLGRAAPLLEPAPRVVQQPRVNGTASPVQNQLVEES 647

Query: 679  THGEADEY 702
            T+GEADEY
Sbjct: 648  TNGEADEY 655


>ref|XP_006362716.1| PREDICTED: translocase of chloroplast 120, chloroplastic-like
           [Solanum tuberosum]
          Length = 1059

 Score =  113 bits (282), Expect = 7e-23
 Identities = 92/269 (34%), Positives = 124/269 (46%), Gaps = 37/269 (13%)
 Frame = +1

Query: 7   VNGSNTDEQQIDGPDNDAVSTLQGGSSPLKAEVTEKESTGPEPIASE------------- 147
           +N   TD Q + G ++ AV+ ++      +    +K++T  + +A +             
Sbjct: 83  LNCDATDLQDLKGEESPAVALVKSNDKVQEYAEEQKDATDHQVLAGKDSPAVGLGNLNDK 142

Query: 148 ---YMVEQKDILSSDATDHQGLKLNESPTVGPGNLNDRTSEQKNVSVSGTSASENHT--- 309
              +M +QKD LSSDATD Q L   ESP VG    ND+  +QK+ SV  TSASENHT   
Sbjct: 143 VQLFMEQQKDDLSSDATDDQILNDKESPAVGLAISNDKVDDQKDASVFCTSASENHTENS 202

Query: 310 ---GTTAEEERSKSSEALPSDNHEKV-----------SKVSQ----DAGAGVDXXXXXXX 435
                TAE+E+ KSSE   S+N+ KV           SK SQ    DA  GV+       
Sbjct: 203 SRETVTAEDEKWKSSEGSVSNNNGKVGVSTAEFVSVSSKASQLPLVDAIIGVNKAVAQES 262

Query: 436 XXXXXXEDLKQSVSKVTEPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV 615
                 E LKQ+V+ V +PE                                       V
Sbjct: 263 EKPSIKE-LKQNVTGVRKPEAGSARNLSSSSGSSVTRTPPPARPAGLGRAAPLLEPSPRV 321

Query: 616 VQQPRVNGTASPAQNQIVEESTHGEADEY 702
           VQQPRVNG+AS  QNQ+VEE T+GE++EY
Sbjct: 322 VQQPRVNGSASSVQNQLVEEPTNGESEEY 350