BLASTX nr result

ID: Atropa21_contig00003843 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00003843
         (751 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006359664.1| PREDICTED: translocase of chloroplast 120, c...   296   5e-78
ref|XP_004231012.1| PREDICTED: translocase of chloroplast 120, c...   282   7e-74
ref|XP_006362716.1| PREDICTED: translocase of chloroplast 120, c...   108   2e-21

>ref|XP_006359664.1| PREDICTED: translocase of chloroplast 120, chloroplastic-like isoform
            X1 [Solanum tuberosum] gi|565387779|ref|XP_006359665.1|
            PREDICTED: translocase of chloroplast 120,
            chloroplastic-like isoform X2 [Solanum tuberosum]
          Length = 1369

 Score =  296 bits (758), Expect = 5e-78
 Identities = 171/256 (66%), Positives = 183/256 (71%), Gaps = 7/256 (2%)
 Frame = +3

Query: 3    EPVNGSNKDEEQQLDGEKAVCSPEPVNGSNKDEEQLDGPD-DSVSTLQGGSSPLKAEVTE 179
            EPVNGSNKDE QQLDGEKAVCSPEP+N SNKDE+Q+DG D DSVS LQGG  P+KAEVTE
Sbjct: 413  EPVNGSNKDEGQQLDGEKAVCSPEPINISNKDEQQIDGSDNDSVSILQGGHFPVKAEVTE 472

Query: 180  KESTGPEPVQKEILRSDATDHQGLKLNESPTVGPGNLNDRTNEQKNVSVSGASASENHTG 359
            KESTGPE      L  DATD QGLKLNESPT+ PGNLNDRTNEQK+VSVS +SAS NHTG
Sbjct: 473  KESTGPE------LMGDATDDQGLKLNESPTMEPGNLNDRTNEQKDVSVSDSSASVNHTG 526

Query: 360  ------TTADDEMSKSSELLPSDSHEKVLKVSQDAGVGVDKVVMKELVKSVVIEDLKQSV 521
                   TADDEMSKSSE LPSD+HEKV KVSQDAGVGV+KV  KE V SVV++ LKQSV
Sbjct: 527  ISVRGRVTADDEMSKSSEALPSDNHEKVSKVSQDAGVGVEKVAEKESV-SVVVKGLKQSV 585

Query: 522  PRVTEPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVQQPRVNGTASPA 701
            PRV EPE                                       VVQQPRVNGTASPA
Sbjct: 586  PRVREPE---ARSATEHPSSSNASATRIPAPAGLGRAAPLLEPAPRVVQQPRVNGTASPA 642

Query: 702  QNQIVEESTNGEADEY 749
            QNQ+VEESTNGEADEY
Sbjct: 643  QNQLVEESTNGEADEY 658


>ref|XP_004231012.1| PREDICTED: translocase of chloroplast 120, chloroplastic-like
            [Solanum lycopersicum]
          Length = 1366

 Score =  282 bits (722), Expect = 7e-74
 Identities = 167/264 (63%), Positives = 181/264 (68%), Gaps = 15/264 (5%)
 Frame = +3

Query: 3    EPVNGSNKDEEQQLDGEKAVCSPEPVNGSNKDEEQLDGPD-DSVSTLQGGSSPLKAEVTE 179
            EPVNGSNK E QQLDGEKAVCSPEP+N +NKDE+Q+D  D DSVS LQGG  PLKAEVTE
Sbjct: 401  EPVNGSNKVEGQQLDGEKAVCSPEPINCTNKDEQQIDDQDNDSVSILQGGHFPLKAEVTE 460

Query: 180  KESTGPEPVQKEILRSDATDHQGLKLNESPTVGPGNLNDRTNEQKNVSVSGASASENHTG 359
            KESTGPE      L  DA+DHQGLKLNESPT+ PGNLNDRTNEQK+VSVS +SAS NH+G
Sbjct: 461  KESTGPE------LMGDASDHQGLKLNESPTMEPGNLNDRTNEQKDVSVSDSSASLNHSG 514

Query: 360  ------TTADDEMSKSSELLPSDSHEKVLKVSQDAGVGVDKVVMKELVK--------SVV 497
                   TADDEMSKSSE LPSD++EKV KVSQDA VGVDKVV KE V         SVV
Sbjct: 515  ISVRGKVTADDEMSKSSEALPSDNNEKVSKVSQDAVVGVDKVVEKESVDKVIEKEPVSVV 574

Query: 498  IEDLKQSVPRVTEPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVQQPR 677
            ++DLKQSVPRV E E                                       VVQQPR
Sbjct: 575  VKDLKQSVPRVRESE---ARSATEHPSSSNASATRIPAPAGLGRAAPLLEPAPRVVQQPR 631

Query: 678  VNGTASPAQNQIVEESTNGEADEY 749
            VNGTASP QNQ+VEESTNGEADEY
Sbjct: 632  VNGTASPVQNQLVEESTNGEADEY 655


>ref|XP_006362716.1| PREDICTED: translocase of chloroplast 120, chloroplastic-like
           [Solanum tuberosum]
          Length = 1059

 Score =  108 bits (270), Expect = 2e-21
 Identities = 93/240 (38%), Positives = 115/240 (47%), Gaps = 23/240 (9%)
 Frame = +3

Query: 99  EEQLDGPDDSVSTLQGGSSPLKA--EVTEKESTGPEPVQKEILRSDATDHQGLKLNESPT 272
           EEQ D  D  V  L G  SP      + +K     E  QK+ L SDATD Q L   ESP 
Sbjct: 115 EEQKDATDHQV--LAGKDSPAVGLGNLNDKVQLFMEQ-QKDDLSSDATDDQILNDKESPA 171

Query: 273 VGPGNLNDRTNEQKNVSVSGASASENHT------GTTADDEMSKSSELLPSDSHEKV--- 425
           VG    ND+ ++QK+ SV   SASENHT        TA+DE  KSSE   S+++ KV   
Sbjct: 172 VGLAISNDKVDDQKDASVFCTSASENHTENSSRETVTAEDEKWKSSEGSVSNNNGKVGVS 231

Query: 426 --------LKVSQ----DAGVGVDKVVMKELVKSVVIEDLKQSVPRVTEPEXXXXXXXXX 569
                    K SQ    DA +GV+K V +E  K   I++LKQ+V  V +PE         
Sbjct: 232 TAEFVSVSSKASQLPLVDAIIGVNKAVAQESEKP-SIKELKQNVTGVRKPEAGSARNLSS 290

Query: 570 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVQQPRVNGTASPAQNQIVEESTNGEADEY 749
                                         VVQQPRVNG+AS  QNQ+VEE TNGE++EY
Sbjct: 291 SSGSSVTRTPPPARPAGLGRAAPLLEPSPRVVQQPRVNGSASSVQNQLVEEPTNGESEEY 350


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