BLASTX nr result
ID: Atropa21_contig00003831
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atropa21_contig00003831 (3379 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ... 454 e-125 emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera] 385 e-108 emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera] 385 e-104 emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera] 347 3e-97 gb|ABW74566.1| integrase [Boechera divaricarpa] 361 1e-96 emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera] 347 2e-96 emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera] 337 2e-89 emb|CAN77122.1| hypothetical protein VITISV_013624 [Vitis vinifera] 258 1e-68 gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi... 262 9e-67 emb|CAH66391.1| OSIGBa0134J07.9 [Oryza sativa Indica Group] 261 1e-66 gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi... 261 1e-66 emb|CAN74303.1| hypothetical protein VITISV_032980 [Vitis vinifera] 261 1e-66 emb|CAN71445.1| hypothetical protein VITISV_042489 [Vitis vinifera] 261 1e-66 gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group... 257 3e-66 gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal... 259 4e-66 emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] 258 1e-65 emb|CAB75469.1| copia-type reverse transcriptase-like protein [A... 258 2e-65 gb|ABA99612.1| retrotransposon protein, putative, unclassified [... 257 2e-65 emb|CAN68235.1| hypothetical protein VITISV_037104 [Vitis vinifera] 246 5e-65 gb|AGW47867.1| polyprotein [Phaseolus vulgaris] 251 2e-63 >gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum] Length = 1333 Score = 454 bits (1169), Expect = e-125 Identities = 226/349 (64%), Positives = 265/349 (75%) Frame = +3 Query: 2331 RKKD*QNHANFSEEAENQSKLFMAHSQITNTTDNVWFIDSGCSNHVTGIRSLFRDLDESQ 2510 ++KD Q ANF++ E +SKLFMA SQIT + + VWFIDSGCSNH++ +SLFRDLDESQ Sbjct: 276 KQKDEQKDANFTQNVEEESKLFMASSQITESANAVWFIDSGCSNHMSSSKSLFRDLDESQ 335 Query: 2511 KSDVQLGDDKQVRVEGKGTIAIKTMQGNVKLLCDVQLVPGLAHNLLSAGQLMASGYSVLF 2690 KS+V+LGDDKQV +EGKGT+ IKT+QGNVK L DVQ VP LAHNLLS GQLM SGYSV+F Sbjct: 336 KSEVRLGDDKQVHIEGKGTVEIKTVQGNVKFLYDVQYVPTLAHNLLSVGQLMTSGYSVVF 395 Query: 2691 KNN*CIVSDIKSGQTIAVVPITQNNMFPLNVSTVEKNALIAKGVNETQXXXXXXXXXXXX 2870 +N C + D +SG+TIA VP+TQN MFPL++S V +AL+ K NET Sbjct: 396 YDNACDIKDKESGRTIARVPMTQNKMFPLDISNVGNSALVVKEKNETNLWHLRYGHLNVN 455 Query: 2871 XXXXXTMKNMVVWLPEMGELDLCEGCIFGKQSRKSLPIGK*WRAARCFELVHGDLCGAMK 3050 K+MV+ LP + ELDLCEGCI+GKQ+RKS P+GK WRA C ELVH DLCG MK Sbjct: 456 WLKLLVQKDMVIGLPNIKELDLCEGCIYGKQTRKSFPVGKSWRATTCLELVHADLCGPMK 515 Query: 3051 TESLGGSLYFLLFTDDYSLMNWAYFLKFKSEAFENFKKFKTLVEKKTSCNIKALRTDRGG 3230 ESLGGS YFL+FTDDYS +W YFLKFKSE FE FKKFK VE ++ IK+LRTDRGG Sbjct: 516 MESLGGSRYFLMFTDDYSRFSWVYFLKFKSETFETFKKFKAFVENQSGNKIKSLRTDRGG 575 Query: 3231 EFLSNYFSLFCEENGIRMELTTPYSPQQNGVAEPKNGTVV*MARSLLNA 3377 EFLSN F+LFCEENGIR ELT PY+P+QNGVAE KN TVV MARS L A Sbjct: 576 EFLSNDFNLFCEENGIRRELTAPYTPEQNGVAERKNRTVVEMARSSLKA 624 Score = 175 bits (444), Expect(2) = 6e-67 Identities = 100/233 (42%), Positives = 133/233 (57%), Gaps = 3/233 (1%) Frame = +3 Query: 1557 DLKKKKFQGSSKVIIVKIQSLRHDFETLFMKNNESVQDFLLRVSGIVSQMKSYGEEVGDE 1736 ++ K+++ G KVI VK+Q+LR DFETLFM NESVQ +L R S IV++M+SYGE++ ++ Sbjct: 91 EILKQEYFGDDKVITVKLQTLRRDFETLFMNENESVQGYLSRTSAIVNRMRSYGEKIDNQ 150 Query: 1737 IVISKVLRSL---LQNLIMWLHP*RNQNTYLYFHLMN*WVLC*LMKIG*TGRPREKIEEK 1907 IV+SKVLRSL ++++ + ++ +TY + LM+ L R REK++EK Sbjct: 151 IVVSKVLRSLTTKFEHVVTAIEESKDLSTYSFDELMS----SLLAHEDRLNRSREKVQEK 206 Query: 1908 DFQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQFNETRQPKGDFHYRYCKKF 2087 FQV +Q E RQ K + RYCKKF Sbjct: 207 AFQVKGEFSYKGKAENSAGRGHGRGNFRGRGRGGSGRGRNQVGEFRQYKSNIQCRYCKKF 266 Query: 2088 GHTEAYCWIKQKDEQNHANFSEKAENESKLFMAHSQITNTTTNVWFTDS*CSN 2246 GH E CW KQKDEQ ANF++ E ESKLFMA SQIT + VWF DS CSN Sbjct: 267 GHKEVDCWTKQKDEQKDANFTQNVEEESKLFMASSQITESANAVWFIDSGCSN 319 Score = 109 bits (272), Expect(2) = 6e-67 Identities = 56/104 (53%), Positives = 73/104 (70%) Frame = +1 Query: 1267 MAANGMXXXXQPFIPIFNGEKYEFWSINMKTLFRSQELWDLVEDGFVDIEEPDAEEERRL 1446 MA NG QP IPIF GE Y+FWS+ MKTLF+SQELWD+VE G I E +A + + Sbjct: 1 MAGNGTAASSQPLIPIFRGENYQFWSLKMKTLFKSQELWDIVETG---IPEGNANQ---M 54 Query: 1447 KEIRQKDAKALFFIQQAVHETIFSRIAAAATSRDAWQI*KKRSF 1578 +E R++D+KALF IQQA+ + IF RI+A TS+ AW+I K+ F Sbjct: 55 REHRKRDSKALFTIQQALDDEIFPRISAVETSKQAWEILKQEYF 98 >emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera] Length = 1274 Score = 385 bits (990), Expect(2) = e-108 Identities = 189/349 (54%), Positives = 247/349 (70%) Frame = +3 Query: 2331 RKKD*QNHANFSEEAENQSKLFMAHSQITNTTDNVWFIDSGCSNHVTGIRSLFRDLDESQ 2510 +K+ + AN+ E+ E+Q KLFM +++ +++N+WF+DSGCSNH+TGI+SLF++LDES Sbjct: 271 KKERQEKQANYVEQEEDQVKLFMXYNEEVVSSNNIWFLDSGCSNHMTGIKSLFKELDESH 330 Query: 2511 KSDVQLGDDKQVRVEGKGTIAIKTMQGNVKLLCDVQLVPGLAHNLLSAGQLMASGYSVLF 2690 K V+LGDDKQV VEGKG +A+ GNVKLL +V +P L NLLS GQLM SGYS+LF Sbjct: 331 KLKVKLGDDKQVXVEGKGIMAVNNGHGNVKLLYNVYFIPSLTQNLLSVGQLMVSGYSILF 390 Query: 2691 KNN*CIVSDIKSGQTIAVVPITQNNMFPLNVSTVEKNALIAKGVNETQXXXXXXXXXXXX 2870 C++ D KS Q I V + N +FPL VS++EK+AL+ K +E+ Sbjct: 391 DGATCVIKDKKSDQIIVNVRMAANKLFPLEVSSIEKHALVVKETSESNLWHLRYGHLNVK 450 Query: 2871 XXXXXTMKNMVVWLPEMGELDLCEGCIFGKQSRKSLPIGK*WRAARCFELVHGDLCGAMK 3050 + K MV LP++ +++CEGCI+GKQS+K P G+ RA+ C E++H DLCG M+ Sbjct: 451 GLKLLSKKEMVFGLPKIDSVNVCEGCIYGKQSKKPFPKGRSRRASSCLEIIHADLCGPMQ 510 Query: 3051 TESLGGSLYFLLFTDDYSLMNWAYFLKFKSEAFENFKKFKTLVEKKTSCNIKALRTDRGG 3230 T S GGS YFLLFTDD+S M+W YFL+ K+E FE FKKFK VEK++ IK LRTDRGG Sbjct: 511 TASFGGSRYFLLFTDDHSRMSWVYFLQSKAETFETFKKFKAFVEKQSGKCIKVLRTDRGG 570 Query: 3231 EFLSNYFSLFCEENGIRMELTTPYSPQQNGVAEPKNGTVV*MARSLLNA 3377 EFLSN F +FCEE G+ ELTTPYSP+QNGVAE KN TVV MARS++ A Sbjct: 571 EFLSNDFKVFCEEEGLHRELTTPYSPEQNGVAERKNRTVVEMARSMMKA 619 Score = 36.6 bits (83), Expect(2) = e-108 Identities = 11/31 (35%), Positives = 20/31 (64%) Frame = +2 Query: 2249 SETRQPEGDFQCRYCKKFGHTEAYCWTTQKR 2341 +E + + + QC YCK+FGH + CW +++ Sbjct: 245 TEKNRNKSNIQCYYCKRFGHVQXECWKKERQ 275 Score = 121 bits (303), Expect(2) = 4e-50 Identities = 60/91 (65%), Positives = 72/91 (79%) Frame = +1 Query: 1282 MXXXXQPFIPIFNGEKYEFWSINMKTLFRSQELWDLVEDGFVDIEEPDAEEERRLKEIRQ 1461 M QP IPIF GE YEFWSI MKTLF+SQ+LWDLVE+G+ P +EE RLKE + Sbjct: 8 MVSVSQPTIPIFKGECYEFWSIKMKTLFKSQDLWDLVENGY-----PYPDEEARLKENTK 62 Query: 1462 KDAKALFFIQQAVHETIFSRIAAAATSRDAW 1554 KD+KALFFIQQAVHE+IFS+IAAA T+++AW Sbjct: 63 KDSKALFFIQQAVHESIFSKIAAATTAKEAW 93 Score = 107 bits (267), Expect(2) = 4e-50 Identities = 76/236 (32%), Positives = 110/236 (46%), Gaps = 9/236 (3%) Frame = +3 Query: 1566 KKKFQGSSKVIIVKIQSLRHDFETLFMKNNESVQDFLLRVSGIVSQMKSYGEEVGDEIVI 1745 K FQGSSKVI VK+QSLR DFETL MKN ES+QDF ++ + D+ V+ Sbjct: 97 KTAFQGSSKVITVKLQSLRRDFETLHMKNGESMQDFFVK-------------NILDQTVV 143 Query: 1746 SKVLRSL---LQNLIMWLHP*RNQNTYLYFHLMN*WVLC*LMKIG*TGRPREKIEEKDFQ 1916 +KVLRSL +++ + ++ +TY + LM + R EK EEK F Sbjct: 144 AKVLRSLTPKFDHVVAAIEESKDLSTYSFDELMGSLQSHEVR----LSRTEEKNEEKAFY 199 Query: 1917 VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS------QFNETRQPKGDFHYRYC 2078 Q E + K + YC Sbjct: 200 TKGETSDQKNGGREATGRGRGRGGAHGRGGRGRGRGDAQGYQRQSTEKNRNKSNIQCYYC 259 Query: 2079 KKFGHTEAYCWIKQKDEQNHANFSEKAENESKLFMAHSQITNTTTNVWFTDS*CSN 2246 K+FGH + CW K++ E+ AN+ E+ E++ KLFM +++ ++ N+WF DS CSN Sbjct: 260 KRFGHVQXECWKKERQEKQ-ANYVEQEEDQVKLFMXYNEEVVSSNNIWFLDSGCSN 314 >emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera] Length = 1472 Score = 385 bits (988), Expect = e-104 Identities = 190/349 (54%), Positives = 247/349 (70%) Frame = +3 Query: 2331 RKKD*QNHANFSEEAENQSKLFMAHSQITNTTDNVWFIDSGCSNHVTGIRSLFRDLDESQ 2510 +K+ + AN+ E+ E+Q KLFMA+++ +++N+WF+DSGCSNH+TGI+SLF++LDES Sbjct: 256 KKERQEKQANYVEQEEDQVKLFMAYNEEVVSSNNIWFLDSGCSNHMTGIKSLFKELDESH 315 Query: 2511 KSDVQLGDDKQVRVEGKGTIAIKTMQGNVKLLCDVQLVPGLAHNLLSAGQLMASGYSVLF 2690 K V+LGDDKQV+VEGKGT A+ GNVKLL +V +P L NLLS GQLM SGYS+LF Sbjct: 316 KLKVKLGDDKQVQVEGKGTXAVNNGHGNVKLLYNVYFIPSLTQNLLSVGQLMVSGYSILF 375 Query: 2691 KNN*CIVSDIKSGQTIAVVPITQNNMFPLNVSTVEKNALIAKGVNETQXXXXXXXXXXXX 2870 C++ D KS Q I V + N +FPL VS++EK+AL+ K +E+ Sbjct: 376 DGATCVIKDKKSDQIIVBVRMAANKLFPLEVSSIEKHALVVKETSESNLWHLRYGHLNVK 435 Query: 2871 XXXXXTMKNMVVWLPEMGELDLCEGCIFGKQSRKSLPIGK*WRAARCFELVHGDLCGAMK 3050 + K MV LP++ +++CEGCI+GKQS+K P G+ RA+ C E++H DLCG M+ Sbjct: 436 GLKLLSKKEMVFGLPKIDSVNVCEGCIYGKQSKKPFPKGRSRRASSCLEIIHADLCGPMQ 495 Query: 3051 TESLGGSLYFLLFTDDYSLMNWAYFLKFKSEAFENFKKFKTLVEKKTSCNIKALRTDRGG 3230 T S GGS YFLLFTDD+S M+W YFL+ K+E FE FKKFK VEK++ IK LRTDRGG Sbjct: 496 TASFGGSRYFLLFTDDHSRMSWVYFLQSKAETFETFKKFKAFVEKQSGKCIKVLRTDRGG 555 Query: 3231 EFLSNYFSLFCEENGIRMELTTPYSPQQNGVAEPKNGTVV*MARSLLNA 3377 EFLSN F +F EE G+ ELTTPYSP QNGVAE KN TVV MARS++ A Sbjct: 556 EFLSNDFKVFXEEEGLHRELTTPYSPXQNGVAERKNRTVVEMARSMMKA 604 Score = 122 bits (305), Expect(2) = 6e-54 Identities = 88/238 (36%), Positives = 123/238 (51%), Gaps = 11/238 (4%) Frame = +3 Query: 1566 KKKFQGSSKVIIVKIQSLRHDFETLFMKNNESVQDFLLRVSGIVSQMKSYGEEVGDEIVI 1745 K FQGSSKVI VK+QSLR DFETL MKN ESVQDFL RV+ IV+QM+SYGE++ D+ V+ Sbjct: 97 KTAFQGSSKVITVKLQSLRRDFETLHMKNGESVQDFLSRVAAIVNQMRSYGEDILDQTVV 156 Query: 1746 SKVLRSL---LQNLIMWLHP*RNQNTYLYFHLMN*WVLC*LMKIG*TGRPREKIEEKDFQ 1916 +KVLRSL +++ + ++ +TY + LM + R EK EEK F Sbjct: 157 AKVLRSLTPKFDHVVAAIEESKDLSTYSFDELMGSLQSHEVR----LSRTEEKNEEKXFY 212 Query: 1917 VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQFNETRQP------KGDFHYRYC 2078 Q N R+ +G H R Sbjct: 213 T------------------------------KGETSDQKNGGREATGRGCGRGGAHGRGG 242 Query: 2079 KKFGHTEAY--CWIKQKDEQNHANFSEKAENESKLFMAHSQITNTTTNVWFTDS*CSN 2246 + G +A CW K++ E+ AN+ E+ E++ KLFMA+++ ++ N+WF DS CSN Sbjct: 243 RGRGRGDAQXECWKKERQEK-QANYVEQEEDQVKLFMAYNEEVVSSNNIWFLDSGCSN 299 Score = 119 bits (298), Expect(2) = 6e-54 Identities = 59/91 (64%), Positives = 71/91 (78%) Frame = +1 Query: 1282 MXXXXQPFIPIFNGEKYEFWSINMKTLFRSQELWDLVEDGFVDIEEPDAEEERRLKEIRQ 1461 M QP IPIF GE YEFWSI MKTLF+SQ+LWDLVE+G+ P +EE RLKE + Sbjct: 8 MVSVSQPAIPIFKGECYEFWSIKMKTLFKSQDLWDLVENGY-----PYPDEEARLKENTK 62 Query: 1462 KDAKALFFIQQAVHETIFSRIAAAATSRDAW 1554 KD+KALFFIQQAVHE+IFS+IAA T+++AW Sbjct: 63 KDSKALFFIQQAVHESIFSKIAAXTTAKEAW 93 >emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera] Length = 1109 Score = 347 bits (891), Expect(2) = 3e-97 Identities = 175/349 (50%), Positives = 230/349 (65%) Frame = +3 Query: 2331 RKKD*QNHANFSEEAENQSKLFMAHSQITNTTDNVWFIDSGCSNHVTGIRSLFRDLDESQ 2510 +K+ + AN+ E+ E+Q KLFMA+++ ++N+WF+DSGCSNH+TGI+SLF++LDES Sbjct: 257 KKERQEKQANYVEQEEDQVKLFMAYNEEVVXSNNIWFLDSGCSNHMTGIKSLFKELDESH 316 Query: 2511 KSDVQLGDDKQVRVEGKGTIAIKTMQGNVKLLCDVQLVPGLAHNLLSAGQLMASGYSVLF 2690 K V+LGDDKQV VEGKGT+A+ GNVKLL +V +P L NLLS GQLM SGYS+LF Sbjct: 317 KLKVKLGDDKQVXVEGKGTVAVNNGHGNVKLLYNVYFIPSLTQNLLSVGQLMVSGYSILF 376 Query: 2691 KNN*CIVSDIKSGQTIAVVPITQNNMFPLNVSTVEKNALIAKGVNETQXXXXXXXXXXXX 2870 + C++ D K Q I V + N +FPL VS++EK+AL+ K +E+ Sbjct: 377 DGSTCVIKDKKFDQIIVDVRMAANKLFPLEVSSIEKHALVVKETSESNLWHLRYGHLNVK 436 Query: 2871 XXXXXTMKNMVVWLPEMGELDLCEGCIFGKQSRKSLPIGK*WRAARCFELVHGDLCGAMK 3050 + K MV LP++ +++CEGCI+GKQS+K P G+ RA+ C E++H DLCG M+ Sbjct: 437 GLKLLSKKEMVFGLPKIDSVNVCEGCIYGKQSKKPFPKGRSRRASSCLEIIHADLCGPMQ 496 Query: 3051 TESLGGSLYFLLFTDDYSLMNWAYFLKFKSEAFENFKKFKTLVEKKTSCNIKALRTDRGG 3230 S GGS YFLLFTDD+S M+W YFL+ K LRTDRGG Sbjct: 497 IASFGGSRYFLLFTDDHSRMSWVYFLQ-----------------------SKVLRTDRGG 533 Query: 3231 EFLSNYFSLFCEENGIRMELTTPYSPQQNGVAEPKNGTVV*MARSLLNA 3377 EFLSN F +FCEE G+ ELTTPYSP+QNGV E KN TVV MARS++ A Sbjct: 534 EFLSNDFKVFCEEEGLHRELTTPYSPEQNGVVERKNRTVVEMARSMMKA 582 Score = 38.1 bits (87), Expect(2) = 3e-97 Identities = 12/31 (38%), Positives = 21/31 (67%) Frame = +2 Query: 2249 SETRQPEGDFQCRYCKKFGHTEAYCWTTQKR 2341 +E + + + QC YCK+FGH +A CW +++ Sbjct: 231 TEKSRNKSNIQCYYCKRFGHVQAECWKKERQ 261 Score = 136 bits (342), Expect(2) = 4e-50 Identities = 88/231 (38%), Positives = 121/231 (52%), Gaps = 9/231 (3%) Frame = +3 Query: 1581 GSSKVIIVKIQSLRHDFETLFMKNNESVQDFLLRVSGIVSQMKSYGEEVGDEIVISKVLR 1760 GSSKVI VK+QSLR DFETL MKN ESVQDFL RV+ IV+QM+SYGE++ D+ V++KVLR Sbjct: 75 GSSKVITVKLQSLRRDFETLHMKNGESVQDFLSRVAAIVNQMRSYGEDILDQTVVAKVLR 134 Query: 1761 SL---LQNLIMWLHP*RNQNTYLYFHLMN*WVLC*LMKIG*TGRPREKIEEKDFQVXXXX 1931 SL +++ + ++ +TY + LM R EK EEK F Sbjct: 135 SLTPKFDHVVAAIEESKDLSTYSFDELMG----SLQSHEXRLSRTXEKNEEKTFYTKGET 190 Query: 1932 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQFNETRQP------KGDFHYRYCKKFGH 2093 + RQ K + YCK+FGH Sbjct: 191 SDQKNGGREATGRGRGRGGAHGRGGRXRGRGDAQGDQRQSTEKSRNKSNIQCYYCKRFGH 250 Query: 2094 TEAYCWIKQKDEQNHANFSEKAENESKLFMAHSQITNTTTNVWFTDS*CSN 2246 +A CW K++ E+ AN+ E+ E++ KLFMA+++ + N+WF DS CSN Sbjct: 251 VQAECWKKERQEK-QANYVEQEEDQVKLFMAYNEEVVXSNNIWFLDSGCSN 300 Score = 92.4 bits (228), Expect(2) = 4e-50 Identities = 47/72 (65%), Positives = 54/72 (75%) Frame = +1 Query: 1282 MXXXXQPFIPIFNGEKYEFWSINMKTLFRSQELWDLVEDGFVDIEEPDAEEERRLKEIRQ 1461 M QP IPIF GE YEFWSI MKTLF+SQ+LWDLVE+G+ P +EE RLKE + Sbjct: 8 MVSVSQPAIPIFKGECYEFWSIKMKTLFKSQDLWDLVENGY-----PYPDEEARLKENTK 62 Query: 1462 KDAKALFFIQQA 1497 KD+KALFFIQQA Sbjct: 63 KDSKALFFIQQA 74 >gb|ABW74566.1| integrase [Boechera divaricarpa] Length = 1165 Score = 361 bits (927), Expect = 1e-96 Identities = 179/347 (51%), Positives = 241/347 (69%) Frame = +3 Query: 2331 RKKD*QNHANFSEEAENQSKLFMAHSQITNTTDNVWFIDSGCSNHVTGIRSLFRDLDESQ 2510 +K+ + HA F E+ Q +LFMA + +VW++DSGCSNH+TG +S F++LDES Sbjct: 113 KKQKEEKHACFVEQENEQPRLFMAFES-EEASKSVWYLDSGCSNHMTGTKSSFKELDESH 171 Query: 2511 KSDVQLGDDKQVRVEGKGTIAIKTMQGNVKLLCDVQLVPGLAHNLLSAGQLMASGYSVLF 2690 K V+LG+DK+V+VEG+G +A+ GN+KL+ V +P LAHNLLS GQ++ + SVLF Sbjct: 172 KLKVKLGNDKEVQVEGRGVVAVHNGHGNLKLIYGVYYIPDLAHNLLSVGQMVENNCSVLF 231 Query: 2691 KNN*CIVSDIKSGQTIAVVPITQNNMFPLNVSTVEKNALIAKGVNETQXXXXXXXXXXXX 2870 N C++ + KSG T+A+V T NN++PL +S+VE AL+AK + ++ Sbjct: 232 DGNECVIKEKKSGVTLAMVKKTSNNLYPLEMSSVETKALVAKVSDISKLLHLRYGHLHEN 291 Query: 2871 XXXXXTMKNMVVWLPEMGELDLCEGCIFGKQSRKSLPIGK*WRAARCFELVHGDLCGAMK 3050 K+MV+ LP++G L LCEGC++GKQSR+S P+G+ RA + E+VH DLCG M+ Sbjct: 292 GLRVLNQKDMVIGLPKIGALKLCEGCVYGKQSRRSFPVGRARRATQYLEIVHADLCGPMQ 351 Query: 3051 TESLGGSLYFLLFTDDYSLMNWAYFLKFKSEAFENFKKFKTLVEKKTSCNIKALRTDRGG 3230 T SLGGS YFL+ TDDYS M+W YFLK K EAF+ FK FK LVEK++ +K LRTDRGG Sbjct: 352 TASLGGSKYFLMLTDDYSRMSWVYFLKSKGEAFDMFKNFKALVEKQSEQQVKVLRTDRGG 411 Query: 3231 EFLSNYFSLFCEENGIRMELTTPYSPQQNGVAEPKNGTVV*MARSLL 3371 EF S F+ FCE+ GI ELTT Y+P+QNGVAE KN TVV MARS+L Sbjct: 412 EFTSTKFNQFCEKEGIHHELTTAYTPEQNGVAERKNTTVVEMARSML 458 Score = 61.6 bits (148), Expect = 2e-06 Identities = 29/65 (44%), Positives = 40/65 (61%) Frame = +3 Query: 2052 KGDFHYRYCKKFGHTEAYCWIKQKDEQNHANFSEKAENESKLFMAHSQITNTTTNVWFTD 2231 K D YCKK+GH + CW KQK+E+ HA F E+ + +LFMA + + +VW+ D Sbjct: 93 KSDIQCHYCKKYGHMQTNCWKKQKEEK-HACFVEQENEQPRLFMAF-ESEEASKSVWYLD 150 Query: 2232 S*CSN 2246 S CSN Sbjct: 151 SGCSN 155 >emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera] Length = 1430 Score = 347 bits (891), Expect(2) = 2e-96 Identities = 176/349 (50%), Positives = 233/349 (66%) Frame = +3 Query: 2331 RKKD*QNHANFSEEAENQSKLFMAHSQITNTTDNVWFIDSGCSNHVTGIRSLFRDLDESQ 2510 +K+ + AN+ E+ E+Q KLFMA+++ +++N+WF+DSGCSNH+TGI+SLF++LDES Sbjct: 398 KKERQEKQANYVEQEEDQVKLFMAYNEEVVSSNNIWFLDSGCSNHMTGIKSLFKELDESH 457 Query: 2511 KSDVQLGDDKQVRVEGKGTIAIKTMQGNVKLLCDVQLVPGLAHNLLSAGQLMASGYSVLF 2690 K V+LGDD QV+VEGKGT+A+ GNVKLL +V +P L L+ G Sbjct: 458 KLXVKLGDDXQVQVEGKGTVAVNNGHGNVKLLYNVYFIPSLTEKLVKCGATY-------- 509 Query: 2691 KNN*CIVSDIKSGQTIAVVPITQNNMFPLNVSTVEKNALIAKGVNETQXXXXXXXXXXXX 2870 D KS Q I V + N +FPL VS++EK+AL+ K +E+ Sbjct: 510 --------DKKSDQIIVDVRMAANKLFPLEVSSIEKHALVVKETSESNLWHLRYGHLNVK 561 Query: 2871 XXXXXTMKNMVVWLPEMGELDLCEGCIFGKQSRKSLPIGK*WRAARCFELVHGDLCGAMK 3050 + K MV LP++ +++CEGCI+GKQS+K P G+ RA+ C E++H DLCG M+ Sbjct: 562 GLKLLSKKEMVFELPKIDSVNVCEGCIYGKQSKKPFPKGRSRRASSCLEIIHADLCGPMQ 621 Query: 3051 TESLGGSLYFLLFTDDYSLMNWAYFLKFKSEAFENFKKFKTLVEKKTSCNIKALRTDRGG 3230 T S GGS YFLLFTDD+S M+W YFL+ K+E FE FKKFK VEK++ IK LRTDR G Sbjct: 622 TASFGGSRYFLLFTDDHSRMSWVYFLQSKAETFETFKKFKAFVEKQSGKCIKVLRTDRXG 681 Query: 3231 EFLSNYFSLFCEENGIRMELTTPYSPQQNGVAEPKNGTVV*MARSLLNA 3377 EFLSN F +FCEE G+ ELTTPYSP+QNGVAE KN TVV MARS++ A Sbjct: 682 EFLSNDFKVFCEEEGLHRELTTPYSPEQNGVAERKNRTVVEMARSMMXA 730 Score = 35.8 bits (81), Expect(2) = 2e-96 Identities = 11/31 (35%), Positives = 20/31 (64%) Frame = +2 Query: 2249 SETRQPEGDFQCRYCKKFGHTEAYCWTTQKR 2341 +E + + + C YCK+FGH +A CW +++ Sbjct: 372 TEKSRNKSNIXCYYCKRFGHVQAECWKKERQ 402 Score = 137 bits (346), Expect(2) = 3e-55 Identities = 89/233 (38%), Positives = 128/233 (54%), Gaps = 9/233 (3%) Frame = +3 Query: 1575 FQGSSKVIIVKIQSLRHDFETLFMKNNESVQDFLLRVSGIVSQMKSYGEEVGDEIVISKV 1754 FQGSSKVI VK+QSLR DFETL MKN ES QDFL RV+ IV+QM+SYGE++ D+ V++KV Sbjct: 214 FQGSSKVITVKLQSLRRDFETLHMKNGESXQDFLSRVAAIVNQMRSYGEDILDQTVVAKV 273 Query: 1755 LRSL---LQNLIMWLHP*RNQNTYLYFHLMN*WVLC*LMKIG*TGRPREKIEEKDFQVXX 1925 LRSL +++ + ++ +TY + LM + +++ T +K EEK F Sbjct: 274 LRSLTPKFDHVVAXIEESKDLSTYSFDELMG-SLQSHEVRLSXT---EDKNEEKXFYTKG 329 Query: 1926 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQFNETRQP------KGDFHYRYCKKF 2087 + RQ K + YCK+F Sbjct: 330 ETSDXKNGGREXTGRGRGRGGAHGRGGRGRGRGDAQGDQRQSTEKSRNKSNIXCYYCKRF 389 Query: 2088 GHTEAYCWIKQKDEQNHANFSEKAENESKLFMAHSQITNTTTNVWFTDS*CSN 2246 GH +A CW K++ E+ AN+ E+ E++ KLFMA+++ ++ N+WF DS CSN Sbjct: 390 GHVQAECWKKERQEK-QANYVEQEEDQVKLFMAYNEEVVSSNNIWFLDSGCSN 441 Score = 107 bits (268), Expect(2) = 3e-55 Identities = 51/81 (62%), Positives = 65/81 (80%) Frame = +1 Query: 1312 IFNGEKYEFWSINMKTLFRSQELWDLVEDGFVDIEEPDAEEERRLKEIRQKDAKALFFIQ 1491 + GE YEFWSI MKTLF+SQ+LWDLVE+G+ P +EE RLKE +KD+KALFFIQ Sbjct: 132 VVEGECYEFWSIKMKTLFKSQDLWDLVENGY-----PYPDEEARLKENTKKDSKALFFIQ 186 Query: 1492 QAVHETIFSRIAAAATSRDAW 1554 QA+HE+IFS+IA A T+++AW Sbjct: 187 QAIHESIFSKIAVATTAKEAW 207 >emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera] Length = 1183 Score = 337 bits (865), Expect = 2e-89 Identities = 168/302 (55%), Positives = 213/302 (70%) Frame = +3 Query: 2472 GIRSLFRDLDESQKSDVQLGDDKQVRVEGKGTIAIKTMQGNVKLLCDVQLVPGLAHNLLS 2651 GI+SLF++LDES K V+LGDDKQV+VEGKGT+A+ GNVKLL +V +P L NLLS Sbjct: 252 GIKSLFKELDESHKLKVKLGDDKQVQVEGKGTVAVNNGHGNVKLLYNVYFIPSLTQNLLS 311 Query: 2652 AGQLMASGYSVLFKNN*CIVSDIKSGQTIAVVPITQNNMFPLNVSTVEKNALIAKGVNET 2831 GQLM SGYS+LF C++ D KS Q I V + N +FPL VS++EK+AL+ K +E+ Sbjct: 312 VGQLMVSGYSILFDGATCVIKDKKSDQIIFDVRMAANKLFPLEVSSIEKHALVVKETSES 371 Query: 2832 QXXXXXXXXXXXXXXXXXTMKNMVVWLPEMGELDLCEGCIFGKQSRKSLPIGK*WRAARC 3011 + K MV LP++ +++CEGCI+GKQS+K P G+ RA+ C Sbjct: 372 NLWHLRYGHLNVKGLKLLSKKEMVFGLPKIDSVNVCEGCIYGKQSKKPFPKGRSRRASSC 431 Query: 3012 FELVHGDLCGAMKTESLGGSLYFLLFTDDYSLMNWAYFLKFKSEAFENFKKFKTLVEKKT 3191 E++H DLCG M+T S GGS YFLLFT+D+S M+W YFL+ K+E FE FKKFK VEK++ Sbjct: 432 LEIIHADLCGPMQTASFGGSRYFLLFTNDHSRMSWVYFLQSKAETFETFKKFKAFVEKQS 491 Query: 3192 SCNIKALRTDRGGEFLSNYFSLFCEENGIRMELTTPYSPQQNGVAEPKNGTVV*MARSLL 3371 IK LRTDRGGEFLSN F +FCEE G+ ELTTPYSP+QNGVAE KN TVV MARS++ Sbjct: 492 GKCIKVLRTDRGGEFLSNDFKVFCEEEGLHRELTTPYSPEQNGVAERKNRTVVEMARSMM 551 Query: 3372 NA 3377 A Sbjct: 552 KA 553 Score = 119 bits (299), Expect(2) = 1e-46 Identities = 59/91 (64%), Positives = 71/91 (78%) Frame = +1 Query: 1282 MXXXXQPFIPIFNGEKYEFWSINMKTLFRSQELWDLVEDGFVDIEEPDAEEERRLKEIRQ 1461 M QP IPIF GE YEFWSI MKTLF+SQ+LWDLVE+G+ P +EE RLKE + Sbjct: 8 MVSVSQPAIPIFKGECYEFWSIKMKTLFKSQDLWDLVENGY-----PYPDEEARLKENTK 62 Query: 1462 KDAKALFFIQQAVHETIFSRIAAAATSRDAW 1554 KD+KALFFIQQAVHE+IFS+IA A T+++AW Sbjct: 63 KDSKALFFIQQAVHESIFSKIAVATTTKEAW 93 Score = 97.1 bits (240), Expect(2) = 1e-46 Identities = 51/93 (54%), Positives = 68/93 (73%), Gaps = 3/93 (3%) Frame = +3 Query: 1566 KKKFQGSSKVIIVKIQSLRHDFETLFMKNNESVQDFLLRVSGIVSQMKSYGEEVGDEIVI 1745 K FQGSSKVI VK+QSLR DFETL MKN ESVQDFL RV+ IV+QM+SYGE++ D+ ++ Sbjct: 97 KTAFQGSSKVITVKLQSLRRDFETLHMKNGESVQDFLSRVAAIVNQMRSYGEDILDQTIV 156 Query: 1746 SKVLRSL---LQNLIMWLHP*RNQNTYLYFHLM 1835 +KVLRSL +++ + + +TY + LM Sbjct: 157 AKVLRSLTPKFDHVVAAIEESKGLSTYSFDELM 189 >emb|CAN77122.1| hypothetical protein VITISV_013624 [Vitis vinifera] Length = 1269 Score = 258 bits (660), Expect(2) = 1e-68 Identities = 144/344 (41%), Positives = 204/344 (59%), Gaps = 2/344 (0%) Frame = +3 Query: 2346 QNHANFSEEAENQSK-LFMAHSQITNTTDNVWFIDSGCSNHVTGIRSLFRDLDESQKSDV 2522 + HA+ +EE +N + LFMA +++ N W IDSGC++H+T S+F +D S + V Sbjct: 285 EQHASVTEEDKNDDEHLFMASQALSSHELNTWLIDSGCTSHMTKHLSIFTSIDRSVQPKV 344 Query: 2523 QLGDDKQVRVEGKGTIAIKTMQGNVKLLCDVQLVPGLAHNLLSAGQLMASGYSVLFKNN* 2702 +LG+ + V+ +GKGTIAI T +G K++ +V +P L NLLS Q++ +GY+V FK N Sbjct: 345 KLGNGEVVQAKGKGTIAISTKRGT-KIVTNVLYIPDLDQNLLSVAQMLRNGYAVSFKENF 403 Query: 2703 CIVSDIKSGQTIAVVPITQNNMFPLNVSTVEKNALIAKGVNETQXXXXXXXXXXXXXXXX 2882 C +SD+ G IA + + N+ + L + VE + AK ++E+ Sbjct: 404 CFISDVH-GTKIAKIKMNGNSFY-LKLDLVEGHVFSAK-IDESVVWHKRYGHFNLKSLRF 460 Query: 2883 XTMKNMVVWLPEMG-ELDLCEGCIFGKQSRKSLPIGK*WRAARCFELVHGDLCGAMKTES 3059 MV +PE+ CE C GKQ R+ P RA EL+H D+CG M T S Sbjct: 461 MQEAGMVEDMPEISVNAQTCESCELGKQQRQPFPQNMSKRATHKLELIHSDICGPMSTTS 520 Query: 3060 LGGSLYFLLFTDDYSLMNWAYFLKFKSEAFENFKKFKTLVEKKTSCNIKALRTDRGGEFL 3239 L ++YF LF DD+S M W YFLK KS+ FK FK +VE ++ N+K LRTD GGE+ Sbjct: 521 LSNNVYFALFIDDFSRMTWVYFLKTKSQVLSMFKSFKKMVETQSGQNVKVLRTDNGGEYT 580 Query: 3240 SNYFSLFCEENGIRMELTTPYSPQQNGVAEPKNGTVV*MARSLL 3371 S FS+FC+E GI +LT PYSPQQNGV++ KN TV+ MAR +L Sbjct: 581 SKEFSVFCQEAGIVHQLTAPYSPQQNGVSKRKNRTVMEMARCML 624 Score = 31.6 bits (70), Expect(2) = 1e-68 Identities = 10/22 (45%), Positives = 14/22 (63%) Frame = +2 Query: 2276 FQCRYCKKFGHTEAYCWTTQKR 2341 F C +C K GH+E YC +K+ Sbjct: 258 FNCNFCNKLGHSEKYCRAKKKQ 279 >gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana] Length = 1352 Score = 262 bits (669), Expect = 9e-67 Identities = 145/347 (41%), Positives = 205/347 (59%), Gaps = 3/347 (0%) Frame = +3 Query: 2346 QNHANFSEEA--ENQSKLFMAHSQITNTTDNVWFIDSGCSNHVTGIRSLFRDLDESQKSD 2519 + AN+ EE E L ++ + ++ W++DSG SNH+ G +S+F +LDES + + Sbjct: 303 EEKANYVEEKIQEEDMLLMASYKKDEQEENHKWYLDSGASNHMCGRKSMFAELDESVRGN 362 Query: 2520 VQLGDDKQVRVEGKGTIAIKTMQGNVKLLCDVQLVPGLAHNLLSAGQLMASGYSVLFKNN 2699 V LGD+ ++ V+GKG I I+ G+ + + +V +P + N+LS GQL+ GY + K+N Sbjct: 363 VALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDN 422 Query: 2700 *CIVSDIKSGQTIAVVPITQNNMFPLNVSTVEKNALIAKGVNETQXXXXXXXXXXXXXXX 2879 + D +S I VP+++N MF LN+ L E+ Sbjct: 423 NLSIRDQESN-LITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLE 481 Query: 2880 XXTMKNMVVWLPEMGELD-LCEGCIFGKQSRKSLPIGK*WRAARCFELVHGDLCGAMKTE 3056 + K MV LP + + +CEGC+ GKQ + S P RA + EL+H D+CG +K + Sbjct: 482 LLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKSLELIHTDVCGPIKPK 541 Query: 3057 SLGGSLYFLLFTDDYSLMNWAYFLKFKSEAFENFKKFKTLVEKKTSCNIKALRTDRGGEF 3236 SLG S YFLLF DD+S W YFLK KSE FE FKKFK VEK++ IK +R+DRGGEF Sbjct: 542 SLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEF 601 Query: 3237 LSNYFSLFCEENGIRMELTTPYSPQQNGVAEPKNGTVV*MARSLLNA 3377 S F +CE+NGIR +LT P SPQQNGVAE KN T++ MARS+L + Sbjct: 602 TSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKS 648 Score = 53.5 bits (127), Expect(2) = 1e-08 Identities = 32/111 (28%), Positives = 59/111 (53%) Frame = +3 Query: 1434 REEIKRNQTEGRQSFVLYSTSRS*DNFLKNCSSCYLKRCLADLKKKKFQGSSKVIIVKIQ 1613 ++ ++ ++ +++ L D F K + K L+ ++G+ +V V++Q Sbjct: 56 KDGLRDSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTS-YKGADQVKKVRLQ 114 Query: 1614 SLRHDFETLFMKNNESVQDFLLRVSGIVSQMKSYGEEVGDEIVISKVLRSL 1766 +LR +FE L MK E V D+ RV + + +K GE++ D ++ KVLRSL Sbjct: 115 TLRGEFEALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSL 165 Score = 35.8 bits (81), Expect(2) = 1e-08 Identities = 15/33 (45%), Positives = 24/33 (72%) Frame = +2 Query: 1772 KFDHVVASIEESKYLSVFSFDELMGSLLANEDR 1870 KF+H+V IEE+K L + ++L+GSL A E++ Sbjct: 168 KFEHIVTVIEETKDLEAMTIEQLLGSLQAYEEK 200 Score = 63.9 bits (154), Expect = 5e-07 Identities = 30/101 (29%), Positives = 59/101 (58%), Gaps = 4/101 (3%) Frame = +1 Query: 1267 MAANGMXXXXQPF-IPIFNGEKYEFWSINMKTLFRSQELWDLVEDGFVDIEEPDAEEERR 1443 MA+N + PF +P+ Y+ WS+ MK + + ++W++VE GF++ E + + + Sbjct: 1 MASNNV-----PFQVPVLTKSNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQ 55 Query: 1444 ---LKEIRQKDAKALFFIQQAVHETIFSRIAAAATSRDAWQ 1557 L++ R++D KAL I Q + E F ++ A ++++AW+ Sbjct: 56 KDGLRDSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWE 96 >emb|CAH66391.1| OSIGBa0134J07.9 [Oryza sativa Indica Group] Length = 1314 Score = 261 bits (668), Expect = 1e-66 Identities = 145/342 (42%), Positives = 204/342 (59%), Gaps = 1/342 (0%) Frame = +3 Query: 2349 NHANFSEEAENQSKLFMAHSQITNTTDNVWFIDSGCSNHVTGIRSLFRDLDESQKSDVQL 2528 N ANFS+E E ++ + D+VW IDSGC+NH+ +LFR++D + + + Sbjct: 304 NRANFSQEKEKSEEMVFSCHTAQEEKDDVWVIDSGCTNHMAADPNLFREMDSLYHAKIHM 363 Query: 2529 GDDKQVRVEGKGTIAIKTMQGNVKLLCDVQLVPGLAHNLLSAGQLMASGYSVLFKNN*CI 2708 G+ + EGKGT+A++T G K + DV LVP L NLLS GQL+ GY+V F++ C Sbjct: 364 GNGSIAQSEGKGTVAVQTADGP-KFIKDVLLVPDLKQNLLSIGQLLEHGYAVYFEDFSCK 422 Query: 2709 VSDIKSGQTIAVVPITQNNMFPLNVSTVEKNALIAKGVNETQXXXXXXXXXXXXXXXXXT 2888 + D K+ + +A + + +N F L ++ + AL ++ V+ + Sbjct: 423 ILDRKNNRLVAKINMEKNRNFLLRMNHTTQMALRSE-VDISDLWHKRMGHLNYRALKLLR 481 Query: 2889 MKNMVVWLPEMG-ELDLCEGCIFGKQSRKSLPIGK*WRAARCFELVHGDLCGAMKTESLG 3065 K MV LP + + D CEGC+FGKQ + S P WRA+ FELVH D+ G + T S G Sbjct: 482 TKGMVQGLPFITLKSDPCEGCVFGKQIQASFPHSGAWRASAPFELVHTDIVGKVPTMSEG 541 Query: 3066 GSLYFLLFTDDYSLMNWAYFLKFKSEAFENFKKFKTLVEKKTSCNIKALRTDRGGEFLSN 3245 G+ YF+ F DDY+ M W YFLK KS A E FKKFK +VE +++ IK LR+D+GGE++S Sbjct: 542 GNWYFITFIDDYTRMIWVYFLKEKSAALETFKKFKVMVENQSNRKIKVLRSDQGGEYISK 601 Query: 3246 YFSLFCEENGIRMELTTPYSPQQNGVAEPKNGTVV*MARSLL 3371 F +CE GIR +LTT YS QQNGVAE KN T+ MA S+L Sbjct: 602 EFEKYCENAGIRRQLTTGYSAQQNGVAERKNRTINDMANSML 643 Score = 89.0 bits (219), Expect(3) = 1e-35 Identities = 43/89 (48%), Positives = 59/89 (66%), Gaps = 3/89 (3%) Frame = +1 Query: 1297 QPFIPIFNGEKYEFWSINMKTLFRSQELWDLVEDGFVDI---EEPDAEEERRLKEIRQKD 1467 Q +P+F GE Y+ WSI M+TL SQ LWD+V++G+ + E AE+++ L E R D Sbjct: 3 QSMVPVFAGENYDIWSIKMRTLLLSQGLWDIVDNGYQEYSAGETLTAEQKKSLAEDRMSD 62 Query: 1468 AKALFFIQQAVHETIFSRIAAAATSRDAW 1554 AKALF IQQ V E++F RI A S++AW Sbjct: 63 AKALFLIQQGVAESLFPRIIGAKKSKEAW 91 Score = 74.7 bits (182), Expect(3) = 1e-35 Identities = 35/70 (50%), Positives = 51/70 (72%) Frame = +3 Query: 1557 DLKKKKFQGSSKVIIVKIQSLRHDFETLFMKNNESVQDFLLRVSGIVSQMKSYGEEVGDE 1736 D K++FQGS KV+ VK+Q+LR F+ L MK +E V+D+ RV IV+QM+ YGE++ D+ Sbjct: 92 DKLKEEFQGSQKVLAVKLQTLRRQFQNLLMKESEKVKDYFSRVIEIVNQMRLYGEDINDQ 151 Query: 1737 IVISKVLRSL 1766 V+ K+L SL Sbjct: 152 KVVEKILISL 161 Score = 36.6 bits (83), Expect(3) = 1e-35 Identities = 16/33 (48%), Positives = 26/33 (78%) Frame = +2 Query: 1772 KFDHVVASIEESKYLSVFSFDELMGSLLANEDR 1870 K++++VA+IEESK LS + +LM SL ++E+R Sbjct: 164 KYEYIVAAIEESKDLSTLTIQQLMSSLESHEER 196 >gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana] gi|12321387|gb|AAG50765.1|AC079131_10 copia-type polyprotein, putative [Arabidopsis thaliana] Length = 1320 Score = 261 bits (667), Expect = 1e-66 Identities = 145/347 (41%), Positives = 205/347 (59%), Gaps = 3/347 (0%) Frame = +3 Query: 2346 QNHANFSEEA--ENQSKLFMAHSQITNTTDNVWFIDSGCSNHVTGIRSLFRDLDESQKSD 2519 + AN+ EE E L ++ + ++ W++DSG SNH+ G +S+F +LDES + + Sbjct: 303 EEKANYVEEKIQEEDMLLMASYKKDEQEENHKWYLDSGASNHMCGRKSMFAELDESVRGN 362 Query: 2520 VQLGDDKQVRVEGKGTIAIKTMQGNVKLLCDVQLVPGLAHNLLSAGQLMASGYSVLFKNN 2699 V LGD+ ++ V+GKG I I+ G+ + + +V +P + N+LS GQL+ GY + K+N Sbjct: 363 VALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDN 422 Query: 2700 *CIVSDIKSGQTIAVVPITQNNMFPLNVSTVEKNALIAKGVNETQXXXXXXXXXXXXXXX 2879 + D +S I VP+++N MF LN+ L E+ Sbjct: 423 NLSIRDQESN-LITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLE 481 Query: 2880 XXTMKNMVVWLPEMGELD-LCEGCIFGKQSRKSLPIGK*WRAARCFELVHGDLCGAMKTE 3056 + K MV LP + + +CEGC+ GKQ + S P RA + EL+H D+CG +K + Sbjct: 482 LLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIKPK 541 Query: 3057 SLGGSLYFLLFTDDYSLMNWAYFLKFKSEAFENFKKFKTLVEKKTSCNIKALRTDRGGEF 3236 SLG S YFLLF DD+S W YFLK KSE FE FKKFK VEK++ IK +R+DRGGEF Sbjct: 542 SLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEF 601 Query: 3237 LSNYFSLFCEENGIRMELTTPYSPQQNGVAEPKNGTVV*MARSLLNA 3377 S F +CE+NGIR +LT P SPQQNGVAE KN T++ MARS+L + Sbjct: 602 TSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKS 648 Score = 53.5 bits (127), Expect(2) = 1e-08 Identities = 32/111 (28%), Positives = 59/111 (53%) Frame = +3 Query: 1434 REEIKRNQTEGRQSFVLYSTSRS*DNFLKNCSSCYLKRCLADLKKKKFQGSSKVIIVKIQ 1613 ++ ++ ++ +++ L D F K + K L+ ++G+ +V V++Q Sbjct: 56 KDGLRDSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTS-YKGADQVKKVRLQ 114 Query: 1614 SLRHDFETLFMKNNESVQDFLLRVSGIVSQMKSYGEEVGDEIVISKVLRSL 1766 +LR +FE L MK E V D+ RV + + +K GE++ D ++ KVLRSL Sbjct: 115 TLRGEFEALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSL 165 Score = 35.8 bits (81), Expect(2) = 1e-08 Identities = 15/33 (45%), Positives = 24/33 (72%) Frame = +2 Query: 1772 KFDHVVASIEESKYLSVFSFDELMGSLLANEDR 1870 KF+H+V IEE+K L + ++L+GSL A E++ Sbjct: 168 KFEHIVTVIEETKDLEAMTIEQLLGSLQAYEEK 200 Score = 63.9 bits (154), Expect = 5e-07 Identities = 30/101 (29%), Positives = 59/101 (58%), Gaps = 4/101 (3%) Frame = +1 Query: 1267 MAANGMXXXXQPF-IPIFNGEKYEFWSINMKTLFRSQELWDLVEDGFVDIEEPDAEEERR 1443 MA+N + PF +P+ Y+ WS+ MK + + ++W++VE GF++ E + + + Sbjct: 1 MASNNV-----PFQVPVLTKSNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQ 55 Query: 1444 ---LKEIRQKDAKALFFIQQAVHETIFSRIAAAATSRDAWQ 1557 L++ R++D KAL I Q + E F ++ A ++++AW+ Sbjct: 56 KDGLRDSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWE 96 >emb|CAN74303.1| hypothetical protein VITISV_032980 [Vitis vinifera] Length = 1283 Score = 261 bits (667), Expect = 1e-66 Identities = 143/347 (41%), Positives = 193/347 (55%), Gaps = 1/347 (0%) Frame = +3 Query: 2337 KD*QNHANFSEEAENQSKLFMAHSQITNTTDNVWFIDSGCSNHVTGIRSLFRDLDESQKS 2516 K + NF+E+ E S L H+ T N+W+ID+GCSNH+ G +S F DLDE+ + Sbjct: 261 KQGEERTNFAEKEEEVSLLMACHAN-QXTHPNLWYIDTGCSNHMCGDKSAFSDLDETFRX 319 Query: 2517 DVQLGDDKQVRVEGKGTIAIKTMQGNVKLLCDVQLVPGLAHNLLSAGQLMASGYSVLFKN 2696 V GD+ +V V GKG++ I + + + +++ +V VP L NLLS QL GY + K+ Sbjct: 320 SVTFGDNSKVSVMGKGSVXIHSKEKSDQIISNVFFVPDLKTNLLSVXQLQEKGYEIFIKD 379 Query: 2697 N*CIVSDIKSGQTIAVVPITQNNMFPLNVSTVEKNALIAKGVNETQXXXXXXXXXXXXXX 2876 C + D K G IA V +T N MFPL + +N K ++E Sbjct: 380 GVCRIQDEKLG-LIAQVNMTTNRMFPLYLDNTTQNCFSTKLMDEGWLWHFRYGHLNFGGL 438 Query: 2877 XXXTMKNMVVWLPEMGE-LDLCEGCIFGKQSRKSLPIGK*WRAARCFELVHGDLCGAMKT 3053 KNMV LP + +CE C+ GKQ R P GK WR + ELVH D+CG + Sbjct: 439 KTLQQKNMVTGLPPIXTPSQICEECVVGKQHRYQFPKGKSWRXNKVLELVHSDICGPINP 498 Query: 3054 ESLGGSLYFLLFTDDYSLMNWAYFLKFKSEAFENFKKFKTLVEKKTSCNIKALRTDRGGE 3233 S GG YF+ F DYS W YFL+ KSEAF FK FK LVEK+ IK R+D GGE Sbjct: 499 TSNGGKRYFITFIXDYSXKTWVYFLQEKSEAFSTFKSFKMLVEKEAXKPIKIFRSDXGGE 558 Query: 3234 FLSNYFSLFCEENGIRMELTTPYSPQQNGVAEPKNGTVV*MARSLLN 3374 + S F FCE +GI+ +LT YSPQQNG + KN T++ M R++L+ Sbjct: 559 YTSQEFVNFCENHGIQKQLTAAYSPQQNGXSXRKNRTILNMVRTILS 605 Score = 43.5 bits (101), Expect(2) = 2e-06 Identities = 18/47 (38%), Positives = 32/47 (68%) Frame = +3 Query: 1626 DFETLFMKNNESVQDFLLRVSGIVSQMKSYGEEVGDEIVISKVLRSL 1766 +FETL M++ ESV D+ R I ++M+ +G++ D ++ K+LRS+ Sbjct: 83 EFETLRMRSGESVTDYFSRTMAIXNKMRIHGDKTEDVTIVEKILRSM 129 Score = 38.1 bits (87), Expect(2) = 2e-06 Identities = 19/38 (50%), Positives = 24/38 (63%) Frame = +2 Query: 1766 TPKFDHVVASIEESKYLSVFSFDELMGSLLANEDRLNR 1879 TP F+ VV SIEES + S DEL SLL +E + N+ Sbjct: 130 TPXFNFVVCSIEESHDIDELSIDELQSSLLVHERKFNQ 167 >emb|CAN71445.1| hypothetical protein VITISV_042489 [Vitis vinifera] Length = 1246 Score = 261 bits (667), Expect = 1e-66 Identities = 145/347 (41%), Positives = 195/347 (56%), Gaps = 1/347 (0%) Frame = +3 Query: 2337 KD*QNHANFSEEAENQSKLFMAHSQITNTTDNVWFIDSGCSNHVTGIRSLFRDLDESQKS 2516 K + NF+E+ E S L H+ T N+W+ID+ CSNH+ G +S F DLDE+ ++ Sbjct: 261 KQGEERTNFAEKEEEVSLLMACHAN-QGTHXNLWYIDTXCSNHMCGDKSAFSDLDETFRN 319 Query: 2517 DVQLGDDKQVRVEGKGTIAIKTMQGNVKLLCDVQLVPGLAHNLLSAGQLMASGYSVLFKN 2696 V GD+ +V V GKG++ I + + + K++ +V VP L LLS GQL GY + K+ Sbjct: 320 SVTFGDNSKVSVMGKGSVRIHSKEKSDKIISNVFFVPDLKTTLLSVGQLQEKGYEIFIKD 379 Query: 2697 N*CIVSDIKSGQTIAVVPITQNNMFPLNVSTVEKNALIAKGVNETQXXXXXXXXXXXXXX 2876 C + D K G IA V +T N MFPL + +N K ++E Sbjct: 380 GVCRIQDEKLG-LIAQVNMTTNRMFPLYLDNTTQNCFSVKLMDEGWLWHFRYGHLNFXXL 438 Query: 2877 XXXTMKNMVVWLPEMGELD-LCEGCIFGKQSRKSLPIGK*WRAARCFELVHGDLCGAMKT 3053 KNMV LP + +CE C+ GKQ R P GK WR + ELVH D+CG + Sbjct: 439 KTLQXKNMVTGLPXIQTXSQICEECVXGKQHRYQFPKGKSWRXNKVLELVHSDICGPINP 498 Query: 3054 ESLGGSLYFLLFTDDYSLMNWAYFLKFKSEAFENFKKFKTLVEKKTSCNIKALRTDRGGE 3233 S GG YF+ F DYS W YFL+ KSEAF FK FK LVEK+ IK R+D GGE Sbjct: 499 TSNGGKRYFITFIXDYSWKTWVYFLQEKSEAFSTFKSFKMLVEKEAXKPIKIFRSDXGGE 558 Query: 3234 FLSNYFSLFCEENGIRMELTTPYSPQQNGVAEPKNGTVV*MARSLLN 3374 + S F FCE +GI+ +LT YSPQQNG +E KN T++ M ++L+ Sbjct: 559 YTSQEFVNFCENHGIQKQLTAAYSPQQNGXSERKNXTILNMVXTILS 605 Score = 44.3 bits (103), Expect(2) = 1e-06 Identities = 19/47 (40%), Positives = 32/47 (68%) Frame = +3 Query: 1626 DFETLFMKNNESVQDFLLRVSGIVSQMKSYGEEVGDEIVISKVLRSL 1766 +FETL M++ ESV D+ R IV++M +G++ D ++ K+LRS+ Sbjct: 83 EFETLRMRSGESVTDYFSRTMAIVNKMXIHGDKTEDVTIVEKILRSM 129 Score = 38.1 bits (87), Expect(2) = 1e-06 Identities = 19/38 (50%), Positives = 24/38 (63%) Frame = +2 Query: 1766 TPKFDHVVASIEESKYLSVFSFDELMGSLLANEDRLNR 1879 TP F+ VV SIEES + S DEL SLL +E + N+ Sbjct: 130 TPXFNFVVCSIEESHDIDELSIDELQSSLLVHERKFNQ 167 >gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group] gi|108711922|gb|ABF99717.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 1335 Score = 257 bits (657), Expect(2) = 3e-66 Identities = 144/342 (42%), Positives = 202/342 (59%), Gaps = 1/342 (0%) Frame = +3 Query: 2349 NHANFSEEAENQSKLFMAHSQITNTTDNVWFIDSGCSNHVTGIRSLFRDLDESQKSDVQL 2528 N ANFS+E E ++ + D+VW IDSGC+NH+ +LFR++D S + + + Sbjct: 297 NRANFSQEKEKSEEMVFSCHTAQEEKDDVWVIDSGCTNHMAADPNLFREMDSSYHAKIHM 356 Query: 2529 GDDKQVRVEGKGTIAIKTMQGNVKLLCDVQLVPGLAHNLLSAGQLMASGYSVLFKNN*CI 2708 G+ + EGKGT+A++T G K + DV LVP L NLLS GQL+ GY+V F++ C Sbjct: 357 GNGSIAQSEGKGTVAVQTADGP-KFIKDVLLVPDLKQNLLSIGQLLEHGYAVYFEDFSCK 415 Query: 2709 VSDIKSGQTIAVVPITQNNMFPLNVSTVEKNALIAKGVNETQXXXXXXXXXXXXXXXXXT 2888 + D K+ + +A + + +N F L ++ + AL ++ V+ + Sbjct: 416 ILDRKNNRLVAKINMEKNRNFLLRMNHTTQMALRSE-VDISDLWHKRMGHLNYRALKLLR 474 Query: 2889 MKNMVVWLPEMG-ELDLCEGCIFGKQSRKSLPIGK*WRAARCFELVHGDLCGAMKTESLG 3065 K MV LP + + D CEGC+FGKQ R S P WRA+ ELVH D+ G + T S G Sbjct: 475 TKGMVQGLPFITLKSDPCEGCVFGKQIRASFPHSGAWRASAPLELVHADIVGKVPTISEG 534 Query: 3066 GSLYFLLFTDDYSLMNWAYFLKFKSEAFENFKKFKTLVEKKTSCNIKALRTDRGGEFLSN 3245 G+ YF+ F DDY+ M W YFLK KS A E FKKFK +VE +++ IK LR+D+G E++S Sbjct: 535 GNWYFITFIDDYTRMIWVYFLKEKSAALEIFKKFKAMVENQSNRKIKVLRSDQGREYISK 594 Query: 3246 YFSLFCEENGIRMELTTPYSPQQNGVAEPKNGTVV*MARSLL 3371 F +CE GIR +LT YS QQNGVAE KN T+ MA S+L Sbjct: 595 EFEKYCENAGIRRQLTAGYSAQQNGVAERKNRTINDMANSML 636 Score = 25.0 bits (53), Expect(2) = 3e-66 Identities = 10/26 (38%), Positives = 12/26 (46%) Frame = +2 Query: 2282 CRYCKKFGHTEAYCWTTQKRLAESCK 2359 C C+K HT CW +K CK Sbjct: 259 CDICQKSSHTTDMCW--KKMTCNKCK 282 Score = 90.1 bits (222), Expect(2) = 4e-31 Identities = 44/89 (49%), Positives = 59/89 (66%), Gaps = 3/89 (3%) Frame = +1 Query: 1297 QPFIPIFNGEKYEFWSINMKTLFRSQELWDLVEDGFVDI---EEPDAEEERRLKEIRQKD 1467 Q +P+F GE Y+ WSI M+TL SQ LWD+VE+G+ + E AE+++ L E R D Sbjct: 3 QSMVPVFAGENYDIWSIKMRTLLLSQGLWDIVENGYQEYSAGETLTAEQKKSLAEDRMSD 62 Query: 1468 AKALFFIQQAVHETIFSRIAAAATSRDAW 1554 AKALF IQQ V E++F RI A S++AW Sbjct: 63 AKALFLIQQGVAESLFPRIIGAKKSKEAW 91 Score = 74.7 bits (182), Expect(2) = 4e-31 Identities = 35/70 (50%), Positives = 51/70 (72%) Frame = +3 Query: 1557 DLKKKKFQGSSKVIIVKIQSLRHDFETLFMKNNESVQDFLLRVSGIVSQMKSYGEEVGDE 1736 D K++FQGS KV+ VK+Q+LR F+ L MK +E V+D+ RV IV+QM+ YGE++ D+ Sbjct: 92 DKLKEEFQGSQKVLAVKLQTLRRQFQNLLMKESEKVKDYFSRVIEIVNQMRLYGEDINDQ 151 Query: 1737 IVISKVLRSL 1766 V+ K+L SL Sbjct: 152 KVVEKILISL 161 >gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana] Length = 1352 Score = 259 bits (663), Expect = 4e-66 Identities = 144/347 (41%), Positives = 204/347 (58%), Gaps = 3/347 (0%) Frame = +3 Query: 2346 QNHANFSEEA--ENQSKLFMAHSQITNTTDNVWFIDSGCSNHVTGIRSLFRDLDESQKSD 2519 + AN+ EE E L ++ + ++ W++DSG SNH+ G +S+F +LDES + + Sbjct: 303 EEKANYVEEKIQEEDMLLMASYKKDEQKENHKWYLDSGASNHMCGRKSMFAELDESVRGN 362 Query: 2520 VQLGDDKQVRVEGKGTIAIKTMQGNVKLLCDVQLVPGLAHNLLSAGQLMASGYSVLFKNN 2699 V LGD+ ++ V+GKG I I+ G+ + + +V +P + N+LS GQL+ GY + K+N Sbjct: 363 VALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDN 422 Query: 2700 *CIVSDIKSGQTIAVVPITQNNMFPLNVSTVEKNALIAKGVNETQXXXXXXXXXXXXXXX 2879 + D +S I VP+++N MF LN+ L E+ Sbjct: 423 NLSIRDQESN-LITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLE 481 Query: 2880 XXTMKNMVVWLPEMGELD-LCEGCIFGKQSRKSLPIGK*WRAARCFELVHGDLCGAMKTE 3056 + K MV LP + + +CEGC+ GKQ + S P RA + EL+H D+CG +K + Sbjct: 482 LLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIKPK 541 Query: 3057 SLGGSLYFLLFTDDYSLMNWAYFLKFKSEAFENFKKFKTLVEKKTSCNIKALRTDRGGEF 3236 SLG S YFLLF DD+S W YFLK KSE FE FKKFK VEK++ IK +R+DRGGEF Sbjct: 542 SLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEF 601 Query: 3237 LSNYFSLFCEENGIRMELTTPYSPQQNGVAEPKNGTVV*MARSLLNA 3377 S F +CE+NGIR +LT P SPQQNGV E KN T++ MARS+L + Sbjct: 602 TSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMARSMLKS 648 Score = 53.5 bits (127), Expect(2) = 1e-08 Identities = 32/111 (28%), Positives = 59/111 (53%) Frame = +3 Query: 1434 REEIKRNQTEGRQSFVLYSTSRS*DNFLKNCSSCYLKRCLADLKKKKFQGSSKVIIVKIQ 1613 ++ ++ ++ +++ L D F K + K L+ ++G+ +V V++Q Sbjct: 56 KDGLRDSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTS-YKGADQVKKVRLQ 114 Query: 1614 SLRHDFETLFMKNNESVQDFLLRVSGIVSQMKSYGEEVGDEIVISKVLRSL 1766 +LR +FE L MK E V D+ RV + + +K GE++ D ++ KVLRSL Sbjct: 115 TLRGEFEALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSL 165 Score = 35.8 bits (81), Expect(2) = 1e-08 Identities = 15/33 (45%), Positives = 24/33 (72%) Frame = +2 Query: 1772 KFDHVVASIEESKYLSVFSFDELMGSLLANEDR 1870 KF+H+V IEE+K L + ++L+GSL A E++ Sbjct: 168 KFEHIVTVIEETKDLEAMTIEQLLGSLQAYEEK 200 Score = 63.9 bits (154), Expect = 5e-07 Identities = 30/101 (29%), Positives = 59/101 (58%), Gaps = 4/101 (3%) Frame = +1 Query: 1267 MAANGMXXXXQPF-IPIFNGEKYEFWSINMKTLFRSQELWDLVEDGFVDIEEPDAEEERR 1443 MA+N + PF +P+ Y+ WS+ MK + + ++W++VE GF++ E + + + Sbjct: 1 MASNNV-----PFQVPVLTKSNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQ 55 Query: 1444 ---LKEIRQKDAKALFFIQQAVHETIFSRIAAAATSRDAWQ 1557 L++ R++D KAL I Q + E F ++ A ++++AW+ Sbjct: 56 KDGLRDSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWE 96 >emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] Length = 1352 Score = 258 bits (659), Expect = 1e-65 Identities = 143/339 (42%), Positives = 201/339 (59%), Gaps = 2/339 (0%) Frame = +3 Query: 2367 EEAENQSKLFMAHSQITNTTDN-VWFIDSGCSNHVTGIRSLFRDLDESQKSDVQLGDDKQ 2543 E+ + + L MA + +N W++DSG SNH+ G +S+F +LDES + +V LGD+ + Sbjct: 311 EKIQEEDMLLMASYKKDEQKENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDESK 370 Query: 2544 VRVEGKGTIAIKTMQGNVKLLCDVQLVPGLAHNLLSAGQLMASGYSVLFKNN*CIVSDIK 2723 + V+GKG I I+ G+ + + +V +P + N+LS GQL+ GY + K+N + D + Sbjct: 371 MEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDQE 430 Query: 2724 SGQTIAVVPITQNNMFPLNVSTVEKNALIAKGVNETQXXXXXXXXXXXXXXXXXTMKNMV 2903 S I VP+++N MF LN+ L E+ + K MV Sbjct: 431 SN-LITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMV 489 Query: 2904 VWLPEMGELD-LCEGCIFGKQSRKSLPIGK*WRAARCFELVHGDLCGAMKTESLGGSLYF 3080 LP + + +CEGC+ GKQ + S P RA + EL+H D+CG +K +SLG S YF Sbjct: 490 RGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYF 549 Query: 3081 LLFTDDYSLMNWAYFLKFKSEAFENFKKFKTLVEKKTSCNIKALRTDRGGEFLSNYFSLF 3260 LLF DD+S W YFLK KSE FE FKKFK VEK++ IK +R+DRGGEF S F + Sbjct: 550 LLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKY 609 Query: 3261 CEENGIRMELTTPYSPQQNGVAEPKNGTVV*MARSLLNA 3377 CE+NGIR +LT P SPQQNGV E KN T++ MARS+L + Sbjct: 610 CEDNGIRRQLTVPRSPQQNGVVERKNRTILEMARSMLKS 648 Score = 53.5 bits (127), Expect(2) = 1e-08 Identities = 32/111 (28%), Positives = 59/111 (53%) Frame = +3 Query: 1434 REEIKRNQTEGRQSFVLYSTSRS*DNFLKNCSSCYLKRCLADLKKKKFQGSSKVIIVKIQ 1613 ++ ++ ++ +++ L D F K + K L+ ++G+ +V V++Q Sbjct: 56 KDGLRDSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTS-YKGADQVKKVRLQ 114 Query: 1614 SLRHDFETLFMKNNESVQDFLLRVSGIVSQMKSYGEEVGDEIVISKVLRSL 1766 +LR +FE L MK E V D+ RV + + +K GE++ D ++ KVLRSL Sbjct: 115 TLRGEFEALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSL 165 Score = 35.8 bits (81), Expect(2) = 1e-08 Identities = 15/33 (45%), Positives = 24/33 (72%) Frame = +2 Query: 1772 KFDHVVASIEESKYLSVFSFDELMGSLLANEDR 1870 KF+H+V IEE+K L + ++L+GSL A E++ Sbjct: 168 KFEHIVTVIEETKDLEAMTIEQLLGSLQAYEEK 200 Score = 63.9 bits (154), Expect = 5e-07 Identities = 30/101 (29%), Positives = 59/101 (58%), Gaps = 4/101 (3%) Frame = +1 Query: 1267 MAANGMXXXXQPF-IPIFNGEKYEFWSINMKTLFRSQELWDLVEDGFVDIEEPDAEEERR 1443 MA+N + PF +P+ Y+ WS+ MK + + ++W++VE GF++ E + + + Sbjct: 1 MASNNV-----PFQVPVLTKSNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQ 55 Query: 1444 ---LKEIRQKDAKALFFIQQAVHETIFSRIAAAATSRDAWQ 1557 L++ R++D KAL I Q + E F ++ A ++++AW+ Sbjct: 56 KDGLRDSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWE 96 >emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis thaliana] Length = 1272 Score = 258 bits (658), Expect = 2e-65 Identities = 143/344 (41%), Positives = 201/344 (58%), Gaps = 3/344 (0%) Frame = +3 Query: 2355 ANFSEEA--ENQSKLFMAHSQITNTTDNVWFIDSGCSNHVTGIRSLFRDLDESQKSDVQL 2528 AN+ EE E L ++ + ++ W++DSG SNH+ G +S+F +LDES + +V L Sbjct: 306 ANYVEEKIQEEDMLLMASYKKDEQEENHKWYLDSGASNHMCGRKSMFAELDESVRGNVAL 365 Query: 2529 GDDKQVRVEGKGTIAIKTMQGNVKLLCDVQLVPGLAHNLLSAGQLMASGYSVLFKNN*CI 2708 GD+ ++ V+GKG I I+ G+ + + +V +P + N+LS GQL+ GY + K+N Sbjct: 366 GDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLS 425 Query: 2709 VSDIKSGQTIAVVPITQNNMFPLNVSTVEKNALIAKGVNETQXXXXXXXXXXXXXXXXXT 2888 + D K I VP+++N MF LN+ L E+ + Sbjct: 426 IRD-KESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLS 484 Query: 2889 MKNMVVWLPEMGELD-LCEGCIFGKQSRKSLPIGK*WRAARCFELVHGDLCGAMKTESLG 3065 K MV LP + + +CEGC+ G Q + S P RA + EL+H D+CG +K +SLG Sbjct: 485 RKEMVRGLPCINHPNQVCEGCLLGNQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLG 544 Query: 3066 GSLYFLLFTDDYSLMNWAYFLKFKSEAFENFKKFKTLVEKKTSCNIKALRTDRGGEFLSN 3245 S YFLLF DD+S W YFLK KSE FE FKKFK VEK++ IK +R+D GGEF S Sbjct: 545 KSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDSGGEFTSK 604 Query: 3246 YFSLFCEENGIRMELTTPYSPQQNGVAEPKNGTVV*MARSLLNA 3377 F +CE+NGIR +LT P SPQQNGVAE KN T++ MARS+L + Sbjct: 605 EFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKS 648 Score = 53.5 bits (127), Expect(2) = 1e-08 Identities = 32/111 (28%), Positives = 59/111 (53%) Frame = +3 Query: 1434 REEIKRNQTEGRQSFVLYSTSRS*DNFLKNCSSCYLKRCLADLKKKKFQGSSKVIIVKIQ 1613 ++ ++ ++ +++ L D F K + K L+ ++G+ +V V++Q Sbjct: 56 KDGLRDSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTS-YKGADQVKKVRLQ 114 Query: 1614 SLRHDFETLFMKNNESVQDFLLRVSGIVSQMKSYGEEVGDEIVISKVLRSL 1766 +LR +FE L MK E V D+ RV + + +K GE++ D ++ KVLRSL Sbjct: 115 TLRGEFEALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSL 165 Score = 35.8 bits (81), Expect(2) = 1e-08 Identities = 15/33 (45%), Positives = 24/33 (72%) Frame = +2 Query: 1772 KFDHVVASIEESKYLSVFSFDELMGSLLANEDR 1870 KF+H+V IEE+K L + ++L+GSL A E++ Sbjct: 168 KFEHIVTVIEETKDLEAMTIEQLLGSLQAYEEK 200 Score = 63.9 bits (154), Expect = 5e-07 Identities = 30/101 (29%), Positives = 59/101 (58%), Gaps = 4/101 (3%) Frame = +1 Query: 1267 MAANGMXXXXQPF-IPIFNGEKYEFWSINMKTLFRSQELWDLVEDGFVDIEEPDAEEERR 1443 MA+N + PF +P+ Y+ WS+ MK + + ++W++VE GF++ E + + + Sbjct: 1 MASNNV-----PFQVPVLTKSNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQ 55 Query: 1444 ---LKEIRQKDAKALFFIQQAVHETIFSRIAAAATSRDAWQ 1557 L++ R++D KAL I Q + E F ++ A ++++AW+ Sbjct: 56 KDGLRDSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWE 96 >gb|ABA99612.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 1198 Score = 257 bits (657), Expect = 2e-65 Identities = 144/342 (42%), Positives = 203/342 (59%), Gaps = 1/342 (0%) Frame = +3 Query: 2349 NHANFSEEAENQSKLFMAHSQITNTTDNVWFIDSGCSNHVTGIRSLFRDLDESQKSDVQL 2528 N ANFS+E E ++ + D+VW IDSGC+NH+ +LFR++D S + + + Sbjct: 248 NRANFSQEKEKSEEMVFSCHTAQEEKDDVWVIDSGCTNHMAADPNLFREMDSSYHAKIHM 307 Query: 2529 GDDKQVRVEGKGTIAIKTMQGNVKLLCDVQLVPGLAHNLLSAGQLMASGYSVLFKNN*CI 2708 G+ + EGKGT+A++T G K + DV LVP L NLLS GQL+ GY+V F++ C Sbjct: 308 GNGSIAQSEGKGTVAVQTADGP-KFIKDVLLVPDLKQNLLSIGQLLEHGYAVYFEDFSCK 366 Query: 2709 VSDIKSGQTIAVVPITQNNMFPLNVSTVEKNALIAKGVNETQXXXXXXXXXXXXXXXXXT 2888 + D K+ + +A + + +N F L ++ + AL ++ ++ + Sbjct: 367 ILDRKNNRLVAKINMEKNINFLLRMNHPTQMALRSE-IDISDLWHKRMGHLNYRALKLLR 425 Query: 2889 MKNMVVWLPEMG-ELDLCEGCIFGKQSRKSLPIGK*WRAARCFELVHGDLCGAMKTESLG 3065 K MV LP + + D CEGC+FGKQ R S P WRA+ ELVH D+ G + T S G Sbjct: 426 TKGMVQGLPFITLKSDPCEGCVFGKQIRASFPHSGAWRASAPLELVHTDIVGKVPTISEG 485 Query: 3066 GSLYFLLFTDDYSLMNWAYFLKFKSEAFENFKKFKTLVEKKTSCNIKALRTDRGGEFLSN 3245 G+ YF+ F DDY+ M W YFLK KS A E FKKFK +VE +++ IK LR+D+GGE++S Sbjct: 486 GNWYFITFIDDYTRMIWVYFLKEKSAALEIFKKFKAMVENQSNRKIKVLRSDQGGEYISK 545 Query: 3246 YFSLFCEENGIRMELTTPYSPQQNGVAEPKNGTVV*MARSLL 3371 F +CE GIR +LT YS QQNGVAE KN T+ MA S+L Sbjct: 546 EFEKYCENAGIRRQLTAGYSAQQNGVAERKNRTINDMANSML 587 Score = 90.1 bits (222), Expect = 6e-15 Identities = 44/89 (49%), Positives = 59/89 (66%), Gaps = 3/89 (3%) Frame = +1 Query: 1297 QPFIPIFNGEKYEFWSINMKTLFRSQELWDLVEDGFVDI---EEPDAEEERRLKEIRQKD 1467 Q +P+F GE Y+ WSI M+TL SQ LWD+VE+G+ + E AE+++ L E R D Sbjct: 3 QSMVPVFAGENYDIWSIKMRTLLLSQGLWDIVENGYQEYSAGETLTAEQKKSLAEDRMSD 62 Query: 1468 AKALFFIQQAVHETIFSRIAAAATSRDAW 1554 AKALF IQQ V E++F RI A S++AW Sbjct: 63 AKALFLIQQGVAESLFPRIIGAKKSKEAW 91 >emb|CAN68235.1| hypothetical protein VITISV_037104 [Vitis vinifera] Length = 2041 Score = 246 bits (629), Expect(2) = 5e-65 Identities = 140/344 (40%), Positives = 196/344 (56%), Gaps = 2/344 (0%) Frame = +3 Query: 2346 QNHANFSEEAENQSK-LFMAHSQITNTTDNVWFIDSGCSNHVTGIRSLFRDLDESQKSDV 2522 + HA+ + E +N + LFMA +++ N W IDSG ++H+T S+F +D S + V Sbjct: 1018 EQHASVTXEEKNDDEHLFMASQALSSHELNTWLIDSGXTSHMTKHLSIFTSIDRSVQPKV 1077 Query: 2523 QLGDDKQVRVEGKGTIAIKTMQGNVKLLCDVQLVPGLAHNLLSAGQLMASGYSVLFKNN* 2702 +LG+ + V+ +GKGTIAI T +G K++ +V +P L NLLS Q++ +GY V FK N Sbjct: 1078 KLGNGEXVQAKGKGTIAISTKRGT-KIVTNVLYIPDLDQNLLSVAQMLRNGYXVSFKENF 1136 Query: 2703 CIVSDIKSGQTIAVVPITQNNMFPLNVSTVEKNALIAKGVNETQXXXXXXXXXXXXXXXX 2882 C +SD+ + + N F L + VE + AK ++E+ Sbjct: 1137 CFISDVHGTEIXKIK--MNGNSFYLKLDLVEGHVFSAK-IDESVVWHKRYXHFNLKSLRF 1193 Query: 2883 XTMKNMVVWLPEMG-ELDLCEGCIFGKQSRKSLPIGK*WRAARCFELVHGDLCGAMKTES 3059 MV +PE+ CE C GKQ R+ P RA EL+H D+CG M T S Sbjct: 1194 MQEAXMVEDMPEISVNAQTCESCELGKQQRQPFPQNMSKRATHKLELIHSDICGPMSTTS 1253 Query: 3060 LGGSLYFLLFTDDYSLMNWAYFLKFKSEAFENFKKFKTLVEKKTSCNIKALRTDRGGEFL 3239 L ++YF LF DD+S M W YFLK KS+ FK FK +VE ++ +K LRTD GGE+ Sbjct: 1254 LSNNVYFALFIDDFSRMTWVYFLKTKSQVLSMFKSFKKMVETQSGQXVKVLRTDNGGEYT 1313 Query: 3240 SNYFSLFCEENGIRMELTTPYSPQQNGVAEPKNGTVV*MARSLL 3371 S FS+FC+E GI +LT PYSPQ NGV+E KN TV+ MAR +L Sbjct: 1314 SKEFSVFCQEAGIVHQLTAPYSPQXNGVSERKNRTVMEMARCML 1357 Score = 31.6 bits (70), Expect(2) = 5e-65 Identities = 10/22 (45%), Positives = 14/22 (63%) Frame = +2 Query: 2276 FQCRYCKKFGHTEAYCWTTQKR 2341 F C +C K GH+E YC +K+ Sbjct: 991 FNCNFCNKLGHSEKYCRAKKKQ 1012 Score = 48.5 bits (114), Expect(2) = 2e-10 Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 3/86 (3%) Frame = +1 Query: 1306 IPIFNGEKYEFWSINMKTLFRSQELWDLVEDGFVDI---EEPDAEEERRLKEIRQKDAKA 1476 IP+FNGE Y W++ M+ RSQ LW++V P + + +E + K KA Sbjct: 792 IPVFNGEHYHIWAVKMRFYLRSQGLWNVVMSEANPPPLGANPTVAQMKAYEEEKLKKDKA 851 Query: 1477 LFFIQQAVHETIFSRIAAAATSRDAW 1554 + + + + IF++I T + W Sbjct: 852 ITCLHSGLADHIFTKIMNLETPKQVW 877 Score = 46.6 bits (109), Expect(2) = 2e-10 Identities = 22/60 (36%), Positives = 41/60 (68%) Frame = +3 Query: 1557 DLKKKKFQGSSKVIIVKIQSLRHDFETLFMKNNESVQDFLLRVSGIVSQMKSYGEEVGDE 1736 D + +F+GS +V V++ +L+ +FE + MK++ESV+D+ R+ +V+QM+ GE D+ Sbjct: 878 DKLQGEFEGSERVKNVRLLTLKREFELMKMKDDESVKDYSGRLMDVVNQMRLLGEAFTDQ 937 >gb|AGW47867.1| polyprotein [Phaseolus vulgaris] Length = 1471 Score = 251 bits (641), Expect = 2e-63 Identities = 138/342 (40%), Positives = 190/342 (55%), Gaps = 2/342 (0%) Frame = +3 Query: 2358 NFSEEAE-NQSKLFMAHSQITNTTDNVWFIDSGCSNHVTGIRSLFRDLDESQKSDVQLGD 2534 N + E E N+ L MA ++ D +W++DSG SNH+ G LF+D+ + + V GD Sbjct: 329 NLALEVETNEGVLLMAQDEVNINNDTLWYLDSGASNHMCGHEYLFKDMQKIEDGHVSFGD 388 Query: 2535 DKQVRVEGKGTIAIKTMQGNVKLLCDVQLVPGLAHNLLSAGQLMASGYSVLFKNN*CIVS 2714 +V V+G+GT+ G + L DV VP L N+LS GQL GYS+ K+ + Sbjct: 389 ASKVEVKGRGTVCYLQKDGLIGSLQDVYYVPDLKTNILSMGQLTEKGYSIFLKDRFLHLK 448 Query: 2715 DIKSGQTIAVVPITQNNMFPLNVSTVEKNALIAKGVNETQXXXXXXXXXXXXXXXXXTMK 2894 + K G +A + + +N M+ LN+ ++ + L ++ K Sbjct: 449 N-KQGCLVARIEMARNRMYKLNLRSIREKCLQVNIEDKASLWHLRFGHLHHGGLKELAKK 507 Query: 2895 NMVVWLPEMG-ELDLCEGCIFGKQSRKSLPIGK*WRAARCFELVHGDLCGAMKTESLGGS 3071 NMV LP M E CE C+ K R S P + A + EL+H D+CG + ES G Sbjct: 508 NMVHGLPNMDYEGKFCEECVLSKHVRTSFPKKAQYWAKQPLELIHTDICGPITPESFSGK 567 Query: 3072 LYFLLFTDDYSLMNWAYFLKFKSEAFENFKKFKTLVEKKTSCNIKALRTDRGGEFLSNYF 3251 YF+ F DD+S W YFLK KSEAFE FKKFK +VE+ T IKA+R+DRGGE+ S F Sbjct: 568 RYFITFIDDFSRKTWVYFLKEKSEAFEVFKKFKVMVERTTDKQIKAVRSDRGGEYTSTTF 627 Query: 3252 SLFCEENGIRMELTTPYSPQQNGVAEPKNGTVV*MARSLLNA 3377 +CEE GIR LT PY+PQQNGVAE KN T++ M RS+L + Sbjct: 628 MEYCEEQGIRRFLTAPYTPQQNGVAERKNRTILDMVRSMLKS 669 Score = 77.4 bits (189), Expect(3) = 5e-28 Identities = 41/96 (42%), Positives = 59/96 (61%), Gaps = 6/96 (6%) Frame = +1 Query: 1300 PFIPIFNGEKYEFWSINMKTLFRSQELWDLVEDGFVDIEEPD------AEEERRLKEIRQ 1461 P + +Y+ WSI MK L SQ+ W++VE+GF EEP A + + LKE+R Sbjct: 9 PLPRLTKATRYDNWSIQMKALLGSQDSWEVVEEGF---EEPTNTTGYTAAQTKALKEMRS 65 Query: 1462 KDAKALFFIQQAVHETIFSRIAAAATSRDAWQI*KK 1569 KD AL+ + +AV E IF +IA A+TS++AW I +K Sbjct: 66 KDKAALYMLYRAVDEAIFEKIAGASTSKEAWDILEK 101 Score = 60.5 bits (145), Expect(3) = 5e-28 Identities = 28/73 (38%), Positives = 48/73 (65%) Frame = +3 Query: 1557 DLKKKKFQGSSKVIIVKIQSLRHDFETLFMKNNESVQDFLLRVSGIVSQMKSYGEEVGDE 1736 D+ +K F+G+ +V V++Q+LR + E + M +ESV D++ RV +V+Q+ GE + D Sbjct: 97 DILEKVFKGADRVKQVRLQTLRGELENMKMMESESVSDYITRVQAVVNQLNRNGETLTDA 156 Query: 1737 IVISKVLRSLLQN 1775 V+ K+LR+L N Sbjct: 157 RVVEKILRTLTDN 169 Score = 37.0 bits (84), Expect(3) = 5e-28 Identities = 18/35 (51%), Positives = 24/35 (68%) Frame = +2 Query: 1766 TPKFDHVVASIEESKYLSVFSFDELMGSLLANEDR 1870 T F+ +V +IEESK L+ + DEL GSL A+E R Sbjct: 167 TDNFESIVCAIEESKDLATLTVDELAGSLEAHEQR 201