BLASTX nr result
ID: Atropa21_contig00003596
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00003596
(959 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002509506.1| ribosomal protein L27, putative [Ricinus com... 70 6e-15
gb|ABK96514.1| unknown [Populus trichocarpa x Populus deltoides] 70 7e-15
ref|XP_002298632.2| ribosomal protein L27 precursor [Populus tri... 70 7e-15
ref|XP_002270270.1| PREDICTED: 50S ribosomal protein L27, chloro... 70 7e-15
emb|CAN67770.1| hypothetical protein VITISV_010521 [Vitis vinifera] 70 7e-15
gb|EOY02823.1| Ribosomal protein large subunit 27 [Theobroma cacao] 70 6e-14
ref|XP_006447052.1| hypothetical protein CICLE_v10016825mg [Citr... 70 5e-13
gb|EXC33368.1| 50S ribosomal protein L27 [Morus notabilis] 67 8e-13
ref|XP_004138618.1| PREDICTED: 50S ribosomal protein L27, chloro... 66 4e-12
ref|XP_004303965.1| PREDICTED: 50S ribosomal protein L27, chloro... 67 7e-12
sp|P30155.1|RK27_TOBAC RecName: Full=50S ribosomal protein L27, ... 70 9e-12
ref|XP_003538227.1| PREDICTED: 50S ribosomal protein L27, chloro... 63 3e-11
gb|EMJ18964.1| hypothetical protein PRUPE_ppa011695mg [Prunus pe... 66 9e-11
ref|XP_006362856.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosoma... 70 9e-11
ref|XP_004251089.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosoma... 70 9e-11
ref|XP_003522957.1| PREDICTED: 50S ribosomal protein L27, chloro... 63 2e-10
ref|XP_003522956.1| PREDICTED: 50S ribosomal protein L27, chloro... 63 2e-10
ref|NP_001045244.1| Os01g0924000 [Oryza sativa Japonica Group] g... 61 3e-10
gb|EEC72062.1| hypothetical protein OsI_04988 [Oryza sativa Indi... 61 3e-10
gb|ESW20990.1| hypothetical protein PHAVU_005G031700g [Phaseolus... 63 6e-10
>ref|XP_002509506.1| ribosomal protein L27, putative [Ricinus communis]
gi|223549405|gb|EEF50893.1| ribosomal protein L27,
putative [Ricinus communis]
Length = 195
Score = 70.5 bits (171), Expect(2) = 6e-15
Identities = 31/32 (96%), Positives = 32/32 (100%)
Frame = -2
Query: 499 QFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPD 404
+FHPGKNVGLGKDHTIFSLIDGLVKFEKFGPD
Sbjct: 102 KFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPD 133
Score = 37.7 bits (86), Expect(2) = 6e-15
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = -1
Query: 353 RNRKRESFXXXXXXXXXXREGVILQPQLVLASAAESPEDNP 231
R RKRE F +EG+I +PQLVLAS ++ +DNP
Sbjct: 153 RARKREYFRLQRERKKARKEGLIAEPQLVLASNVDATDDNP 193
>gb|ABK96514.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 197
Score = 69.7 bits (169), Expect(2) = 7e-15
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = -2
Query: 499 QFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPD 404
+FHPGKNVG+GKDHTIFSLIDGLVKFEKFGPD
Sbjct: 104 KFHPGKNVGIGKDHTIFSLIDGLVKFEKFGPD 135
Score = 38.1 bits (87), Expect(2) = 7e-15
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = -1
Query: 353 RNRKRESFXXXXXXXXXXREGVILQPQLVLASAAESPEDNP 231
R RKRE+F +EG++ QPQLVLAS ++ + NP
Sbjct: 155 RARKRENFRLQRERKKARKEGIVAQPQLVLASNVDAADSNP 195
>ref|XP_002298632.2| ribosomal protein L27 precursor [Populus trichocarpa]
gi|550348790|gb|EEE83437.2| ribosomal protein L27
precursor [Populus trichocarpa]
Length = 194
Score = 69.7 bits (169), Expect(2) = 7e-15
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = -2
Query: 499 QFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPD 404
+FHPGKNVG+GKDHTIFSLIDGLVKFEKFGPD
Sbjct: 101 KFHPGKNVGIGKDHTIFSLIDGLVKFEKFGPD 132
Score = 38.1 bits (87), Expect(2) = 7e-15
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = -1
Query: 353 RNRKRESFXXXXXXXXXXREGVILQPQLVLASAAESPEDNP 231
R RKRE+F +EG++ QPQLVLAS ++ + NP
Sbjct: 152 RARKRENFRLQRERKKARKEGIVAQPQLVLASNVDAADSNP 192
>ref|XP_002270270.1| PREDICTED: 50S ribosomal protein L27, chloroplastic [Vitis
vinifera] gi|296082339|emb|CBI21344.3| unnamed protein
product [Vitis vinifera]
Length = 186
Score = 70.5 bits (171), Expect(2) = 7e-15
Identities = 31/32 (96%), Positives = 32/32 (100%)
Frame = -2
Query: 499 QFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPD 404
+FHPGKNVGLGKDHTIFSLIDGLVKFEKFGPD
Sbjct: 93 KFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPD 124
Score = 37.4 bits (85), Expect(2) = 7e-15
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = -1
Query: 353 RNRKRESFXXXXXXXXXXREGVILQPQLVLASAAESPEDNP 231
R +KRE F +EG++ QPQLVLASA E+ + NP
Sbjct: 144 RAKKREYFRMQRERKKARKEGIVPQPQLVLASANEATDGNP 184
>emb|CAN67770.1| hypothetical protein VITISV_010521 [Vitis vinifera]
Length = 186
Score = 70.5 bits (171), Expect(2) = 7e-15
Identities = 31/32 (96%), Positives = 32/32 (100%)
Frame = -2
Query: 499 QFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPD 404
+FHPGKNVGLGKDHTIFSLIDGLVKFEKFGPD
Sbjct: 93 KFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPD 124
Score = 37.4 bits (85), Expect(2) = 7e-15
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = -1
Query: 353 RNRKRESFXXXXXXXXXXREGVILQPQLVLASAAESPEDNP 231
R +KRE F +EG++ QPQLVLASA E+ + NP
Sbjct: 144 RAKKREYFRMQRERKKARKEGIVPQPQLVLASANEATDGNP 184
>gb|EOY02823.1| Ribosomal protein large subunit 27 [Theobroma cacao]
Length = 191
Score = 70.5 bits (171), Expect(2) = 6e-14
Identities = 31/32 (96%), Positives = 32/32 (100%)
Frame = -2
Query: 499 QFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPD 404
+FHPGKNVGLGKDHTIFSLIDGLVKFEKFGPD
Sbjct: 98 KFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPD 129
Score = 34.3 bits (77), Expect(2) = 6e-14
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = -1
Query: 353 RNRKRESFXXXXXXXXXXREGVILQPQLVLASAAESPEDNP 231
R RKRE F +EG +P+LVLASAA++ + NP
Sbjct: 149 RARKREYFRMRRERRKARKEGSPAEPELVLASAADATDSNP 189
>ref|XP_006447052.1| hypothetical protein CICLE_v10016825mg [Citrus clementina]
gi|568831655|ref|XP_006470076.1| PREDICTED: 50S
ribosomal protein L27, chloroplastic-like [Citrus
sinensis] gi|557549663|gb|ESR60292.1| hypothetical
protein CICLE_v10016825mg [Citrus clementina]
Length = 192
Score = 70.5 bits (171), Expect(2) = 5e-13
Identities = 31/32 (96%), Positives = 32/32 (100%)
Frame = -2
Query: 499 QFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPD 404
+FHPGKNVGLGKDHTIFSLIDGLVKFEKFGPD
Sbjct: 98 KFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPD 129
Score = 31.2 bits (69), Expect(2) = 5e-13
Identities = 19/45 (42%), Positives = 22/45 (48%)
Frame = -1
Query: 353 RNRKRESFXXXXXXXXXXREGVILQPQLVLASAAESPEDNPSPTC 219
R RKRE F +E + QPQLVLASA + D P C
Sbjct: 149 RARKREYFRLQREKKKARKEAYLAQPQLVLASALDDAADG-LPNC 192
>gb|EXC33368.1| 50S ribosomal protein L27 [Morus notabilis]
Length = 196
Score = 67.4 bits (163), Expect(2) = 8e-13
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = -2
Query: 499 QFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPD 404
+FH GKNVGLGKDHTIFSLIDGLVKFEKFGPD
Sbjct: 102 KFHAGKNVGLGKDHTIFSLIDGLVKFEKFGPD 133
Score = 33.5 bits (75), Expect(2) = 8e-13
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = -1
Query: 353 RNRKRESFXXXXXXXXXXREGVILQPQLVLASAAESPEDNPSPTC 219
R RK+E F +EG++ +PQLVLASA + D+ +P C
Sbjct: 153 RARKKEYFRMQRERRKARQEGIVPEPQLVLASANDDATDD-NPVC 196
>ref|XP_004138618.1| PREDICTED: 50S ribosomal protein L27, chloroplastic-like isoform 1
[Cucumis sativus] gi|449441698|ref|XP_004138619.1|
PREDICTED: 50S ribosomal protein L27, chloroplastic-like
isoform 2 [Cucumis sativus]
gi|449518795|ref|XP_004166421.1| PREDICTED: 50S
ribosomal protein L27, chloroplastic-like isoform 1
[Cucumis sativus] gi|449518797|ref|XP_004166422.1|
PREDICTED: 50S ribosomal protein L27, chloroplastic-like
isoform 2 [Cucumis sativus]
Length = 183
Score = 66.2 bits (160), Expect(2) = 4e-12
Identities = 29/32 (90%), Positives = 31/32 (96%)
Frame = -2
Query: 499 QFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPD 404
+FH GKNVGLGKDHTIFSLIDGLVKFEK+GPD
Sbjct: 91 KFHAGKNVGLGKDHTIFSLIDGLVKFEKYGPD 122
Score = 32.3 bits (72), Expect(2) = 4e-12
Identities = 19/41 (46%), Positives = 23/41 (56%)
Frame = -1
Query: 353 RNRKRESFXXXXXXXXXXREGVILQPQLVLASAAESPEDNP 231
R RKRE F +EG+I QPQL+LAS + E NP
Sbjct: 142 RARKREYFRLQRERKKARKEGIIAQPQLLLAS-TDDVETNP 181
>ref|XP_004303965.1| PREDICTED: 50S ribosomal protein L27, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 200
Score = 67.4 bits (163), Expect(2) = 7e-12
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = -2
Query: 499 QFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPD 404
+FH GKNVGLGKDHTIFSLIDGLVKFEKFGPD
Sbjct: 105 KFHAGKNVGLGKDHTIFSLIDGLVKFEKFGPD 136
Score = 30.4 bits (67), Expect(2) = 7e-12
Identities = 20/42 (47%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -1
Query: 353 RNRKRESFXXXXXXXXXXREGVILQ--PQLVLASAAESPEDN 234
R RKRE+F +E ILQ PQLVLASA E+N
Sbjct: 156 RVRKRENFKLQREKKKARKEAYILQNKPQLVLASADNGAENN 197
>sp|P30155.1|RK27_TOBAC RecName: Full=50S ribosomal protein L27, chloroplastic; AltName:
Full=CL27; Flags: Precursor gi|170306|gb|AAA34104.1|
ribosomal protein L27 [Nicotiana tabacum]
gi|170326|gb|AAA34115.1| ribosomal protein L27
[Nicotiana tabacum]
Length = 179
Score = 70.5 bits (171), Expect(2) = 9e-12
Identities = 31/32 (96%), Positives = 32/32 (100%)
Frame = -2
Query: 499 QFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPD 404
+FHPGKNVGLGKDHTIFSLIDGLVKFEKFGPD
Sbjct: 94 KFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPD 125
Score = 26.9 bits (58), Expect(2) = 9e-12
Identities = 15/25 (60%), Positives = 15/25 (60%)
Frame = -1
Query: 353 RNRKRESFXXXXXXXXXXREGVILQ 279
RNRKRESF REGVILQ
Sbjct: 145 RNRKRESFRLQRERRKARREGVILQ 169
>ref|XP_003538227.1| PREDICTED: 50S ribosomal protein L27, chloroplastic-like [Glycine
max]
Length = 194
Score = 62.8 bits (151), Expect(2) = 3e-11
Identities = 27/32 (84%), Positives = 31/32 (96%)
Frame = -2
Query: 499 QFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPD 404
+FH GKNVGLGKD+TIFSLIDG+VKFEK+GPD
Sbjct: 101 KFHAGKNVGLGKDYTIFSLIDGVVKFEKYGPD 132
Score = 32.7 bits (73), Expect(2) = 3e-11
Identities = 19/41 (46%), Positives = 23/41 (56%)
Frame = -1
Query: 353 RNRKRESFXXXXXXXXXXREGVILQPQLVLASAAESPEDNP 231
R RKRE F +EG IL+ QLVLASA ++ NP
Sbjct: 152 RARKREYFRVRRERKKARQEGAILKSQLVLASADDAAITNP 192
>gb|EMJ18964.1| hypothetical protein PRUPE_ppa011695mg [Prunus persica]
Length = 200
Score = 66.2 bits (160), Expect(2) = 9e-11
Identities = 29/32 (90%), Positives = 31/32 (96%)
Frame = -2
Query: 499 QFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPD 404
+FH GKNVGLGKDHTIFSLIDGLVKFEK+GPD
Sbjct: 106 KFHAGKNVGLGKDHTIFSLIDGLVKFEKYGPD 137
Score = 27.7 bits (60), Expect(2) = 9e-11
Identities = 18/35 (51%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = -1
Query: 353 RNRKRESFXXXXXXXXXXREGVIL--QPQLVLASA 255
R RKRE+F +EG L QPQLVLASA
Sbjct: 157 RARKRENFRLQRERKKARKEGYTLRNQPQLVLASA 191
>ref|XP_006362856.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosomal protein L27,
chloroplastic-like [Solanum tuberosum]
Length = 173
Score = 70.5 bits (171), Expect(2) = 9e-11
Identities = 31/32 (96%), Positives = 32/32 (100%)
Frame = -2
Query: 499 QFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPD 404
+FHPGKNVGLGKDHTIFSLIDGLVKFEKFGPD
Sbjct: 89 KFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPD 120
Score = 23.5 bits (49), Expect(2) = 9e-11
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -1
Query: 353 RNRKRESFXXXXXXXXXXREGVI 285
RNRKRESF REGVI
Sbjct: 140 RNRKRESFRLQRERRKARREGVI 162
>ref|XP_004251089.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosomal protein L27,
chloroplastic-like [Solanum lycopersicum]
Length = 173
Score = 70.5 bits (171), Expect(2) = 9e-11
Identities = 31/32 (96%), Positives = 32/32 (100%)
Frame = -2
Query: 499 QFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPD 404
+FHPGKNVGLGKDHTIFSLIDGLVKFEKFGPD
Sbjct: 89 KFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPD 120
Score = 23.5 bits (49), Expect(2) = 9e-11
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -1
Query: 353 RNRKRESFXXXXXXXXXXREGVI 285
RNRKRESF REGVI
Sbjct: 140 RNRKRESFRLQRERRKARREGVI 162
>ref|XP_003522957.1| PREDICTED: 50S ribosomal protein L27, chloroplastic-like isoform 2
[Glycine max]
Length = 194
Score = 62.8 bits (151), Expect(2) = 2e-10
Identities = 27/32 (84%), Positives = 31/32 (96%)
Frame = -2
Query: 499 QFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPD 404
+FH GKNVGLGKD+TIFSLIDG+VKFEK+GPD
Sbjct: 101 KFHAGKNVGLGKDYTIFSLIDGVVKFEKYGPD 132
Score = 30.0 bits (66), Expect(2) = 2e-10
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = -1
Query: 353 RNRKRESFXXXXXXXXXXREGVILQPQLVLASAAESPEDN 234
R RKRE F +EG IL+ QLVLASA ++ N
Sbjct: 152 RARKREYFRVRRERKKVRQEGAILKSQLVLASADDAAITN 191
>ref|XP_003522956.1| PREDICTED: 50S ribosomal protein L27, chloroplastic-like isoform 1
[Glycine max]
Length = 191
Score = 62.8 bits (151), Expect(2) = 2e-10
Identities = 27/32 (84%), Positives = 31/32 (96%)
Frame = -2
Query: 499 QFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPD 404
+FH GKNVGLGKD+TIFSLIDG+VKFEK+GPD
Sbjct: 98 KFHAGKNVGLGKDYTIFSLIDGVVKFEKYGPD 129
Score = 30.0 bits (66), Expect(2) = 2e-10
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = -1
Query: 353 RNRKRESFXXXXXXXXXXREGVILQPQLVLASAAESPEDN 234
R RKRE F +EG IL+ QLVLASA ++ N
Sbjct: 149 RARKREYFRVRRERKKVRQEGAILKSQLVLASADDAAITN 188
>ref|NP_001045244.1| Os01g0924000 [Oryza sativa Japonica Group]
gi|20139372|sp|O65037.1|RK27_ORYSJ RecName: Full=50S
ribosomal protein L27, chloroplastic; AltName:
Full=CL27; Flags: Precursor gi|2961176|gb|AAC05674.1|
ribosomal protein L27 precursor [Oryza sativa Japonica
Group] gi|20161735|dbj|BAB90651.1| ribosomal protein L27
precursor [Oryza sativa Japonica Group]
gi|20161923|dbj|BAB90834.1| ribosomal protein L27
precursor [Oryza sativa Japonica Group]
gi|113534775|dbj|BAF07158.1| Os01g0924000 [Oryza sativa
Japonica Group] gi|215692638|dbj|BAG88058.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|222619785|gb|EEE55917.1| hypothetical protein
OsJ_04596 [Oryza sativa Japonica Group]
Length = 195
Score = 60.8 bits (146), Expect(2) = 3e-10
Identities = 25/30 (83%), Positives = 29/30 (96%)
Frame = -2
Query: 493 HPGKNVGLGKDHTIFSLIDGLVKFEKFGPD 404
+PG NVG+GKDHT+FSLIDGLVKFEK+GPD
Sbjct: 105 YPGNNVGMGKDHTLFSLIDGLVKFEKYGPD 134
Score = 31.2 bits (69), Expect(2) = 3e-10
Identities = 19/40 (47%), Positives = 23/40 (57%)
Frame = -1
Query: 353 RNRKRESFXXXXXXXXXXREGVILQPQLVLASAAESPEDN 234
R RKRE F EG++ + QLVLA+A ESPE N
Sbjct: 154 RARKREYFRMQRERKKARAEGIV-EVQLVLAAADESPEVN 192
>gb|EEC72062.1| hypothetical protein OsI_04988 [Oryza sativa Indica Group]
Length = 195
Score = 60.8 bits (146), Expect(2) = 3e-10
Identities = 25/30 (83%), Positives = 29/30 (96%)
Frame = -2
Query: 493 HPGKNVGLGKDHTIFSLIDGLVKFEKFGPD 404
+PG NVG+GKDHT+FSLIDGLVKFEK+GPD
Sbjct: 105 YPGNNVGMGKDHTLFSLIDGLVKFEKYGPD 134
Score = 31.2 bits (69), Expect(2) = 3e-10
Identities = 19/40 (47%), Positives = 23/40 (57%)
Frame = -1
Query: 353 RNRKRESFXXXXXXXXXXREGVILQPQLVLASAAESPEDN 234
R RKRE F EG++ + QLVLA+A ESPE N
Sbjct: 154 RARKREYFRMQRERKKARAEGIV-EVQLVLAAADESPEVN 192
>gb|ESW20990.1| hypothetical protein PHAVU_005G031700g [Phaseolus vulgaris]
Length = 189
Score = 62.8 bits (151), Expect(2) = 6e-10
Identities = 27/32 (84%), Positives = 31/32 (96%)
Frame = -2
Query: 499 QFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPD 404
+FH GKNVGLGKD+TIFSLIDG+VKFEK+GPD
Sbjct: 96 KFHAGKNVGLGKDYTIFSLIDGVVKFEKYGPD 127
Score = 28.5 bits (62), Expect(2) = 6e-10
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -1
Query: 353 RNRKRESFXXXXXXXXXXREGVILQPQLVLASAAESPEDNP 231
R RKRE F ++ + PQLVLASA ++ NP
Sbjct: 147 RVRKREFFRMKRERKKARQDAAVPSPQLVLASADDASITNP 187