BLASTX nr result

ID: Atropa21_contig00003350 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00003350
         (733 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004251219.1| PREDICTED: RING-H2 finger protein ATL48-like...   155   2e-35
ref|XP_006340323.1| PREDICTED: RING-H2 finger protein ATL48-like...   152   8e-35
ref|XP_006290393.1| hypothetical protein CARUB_v10018327mg [Caps...   115   1e-23
ref|XP_004298925.1| PREDICTED: RING-H2 finger protein ATL48-like...   114   3e-23
dbj|BAF01465.1| hypothetical protein [Arabidopsis thaliana]           114   3e-23
ref|XP_004152465.1| PREDICTED: RING-H2 finger protein ATL48-like...   113   7e-23
gb|ADU04143.1| hypothetical protein [Gossypium hirsutum]              113   7e-23
ref|XP_006404304.1| hypothetical protein EUTSA_v10010870mg [Eutr...   112   1e-22
gb|ADU04138.1| hypothetical protein [Gossypium hirsutum]              112   1e-22
ref|XP_002877592.1| hypoxia-responsive family protein [Arabidops...   112   1e-22
ref|NP_190386.1| RING-H2 finger protein ATL48 [Arabidopsis thali...   112   2e-22
gb|AAP40393.1| unknown protein [Arabidopsis thaliana] gi|3079408...   112   2e-22
ref|XP_003633805.1| PREDICTED: RING-H2 finger protein ATL48-like...   111   2e-22
ref|XP_006374514.1| hypothetical protein POPTR_0015s08460g [Popu...   110   4e-22
ref|XP_006376844.1| hypothetical protein POPTR_0012s07940g [Popu...   110   5e-22
emb|CBI34952.3| unnamed protein product [Vitis vinifera]              110   5e-22
ref|XP_003608947.1| RING-H2 finger protein ATL3I [Medicago trunc...   109   1e-21
ref|XP_002318030.1| predicted protein [Populus trichocarpa] gi|2...   109   1e-21
ref|XP_002511436.1| conserved hypothetical protein [Ricinus comm...   108   1e-21
gb|EOY20653.1| Hypoxia-responsive family protein / zinc finger (...   108   2e-21

>ref|XP_004251219.1| PREDICTED: RING-H2 finger protein ATL48-like [Solanum lycopersicum]
          Length = 82

 Score =  155 bits (391), Expect = 2e-35
 Identities = 77/82 (93%), Positives = 80/82 (97%)
 Frame = -3

Query: 617 MASTDSKMDSIFPDNKRHRNRLVPIGAFLTAGVLTAGLISFKQGNSQLGQQLMRARVLVQ 438
           M STDS++DSIF DNKRHRNRLVPIGAFLTAGVLTAGLISFK+GNSQLGQQLMRARVLVQ
Sbjct: 1   MGSTDSELDSIFQDNKRHRNRLVPIGAFLTAGVLTAGLISFKRGNSQLGQQLMRARVLVQ 60

Query: 437 GGTVALMVGSAYYYGDNFKRAG 372
           GGTVALMVGSAYYYGDNFKRAG
Sbjct: 61  GGTVALMVGSAYYYGDNFKRAG 82


>ref|XP_006340323.1| PREDICTED: RING-H2 finger protein ATL48-like [Solanum tuberosum]
          Length = 82

 Score =  152 bits (385), Expect = 8e-35
 Identities = 76/82 (92%), Positives = 79/82 (96%)
 Frame = -3

Query: 617 MASTDSKMDSIFPDNKRHRNRLVPIGAFLTAGVLTAGLISFKQGNSQLGQQLMRARVLVQ 438
           M STDS++DSIF D KRHRNRLVPIGAFLTAGVLTAGLISFK+GNSQLGQQLMRARVLVQ
Sbjct: 1   MGSTDSELDSIFQDKKRHRNRLVPIGAFLTAGVLTAGLISFKRGNSQLGQQLMRARVLVQ 60

Query: 437 GGTVALMVGSAYYYGDNFKRAG 372
           GGTVALMVGSAYYYGDNFKRAG
Sbjct: 61  GGTVALMVGSAYYYGDNFKRAG 82


>ref|XP_006290393.1| hypothetical protein CARUB_v10018327mg [Capsella rubella]
           gi|482559100|gb|EOA23291.1| hypothetical protein
           CARUB_v10018327mg [Capsella rubella]
          Length = 86

 Score =  115 bits (289), Expect = 1e-23
 Identities = 54/80 (67%), Positives = 69/80 (86%)
 Frame = -3

Query: 626 LKNMASTDSKMDSIFPDNKRHRNRLVPIGAFLTAGVLTAGLISFKQGNSQLGQQLMRARV 447
           ++ M++ +  M+ +F D KR+RN LVP+GA +TAGVLTAGLISF++GNSQ+GQ LMRARV
Sbjct: 3   VEKMSAVEPDMEDLFQDKKRYRNPLVPLGALMTAGVLTAGLISFRRGNSQMGQVLMRARV 62

Query: 446 LVQGGTVALMVGSAYYYGDN 387
           +VQG TVALMVG+AYYYGDN
Sbjct: 63  VVQGATVALMVGTAYYYGDN 82


>ref|XP_004298925.1| PREDICTED: RING-H2 finger protein ATL48-like [Fragaria vesca subsp.
           vesca]
          Length = 85

 Score =  114 bits (286), Expect = 3e-23
 Identities = 54/80 (67%), Positives = 67/80 (83%)
 Frame = -3

Query: 626 LKNMASTDSKMDSIFPDNKRHRNRLVPIGAFLTAGVLTAGLISFKQGNSQLGQQLMRARV 447
           ++ M   +  ++  F + KR +N LVP+GAFLTAGVLTAGLISF+QGNSQLGQ+LMRARV
Sbjct: 1   MEKMGEVEPSLEVFFEEKKRKKNPLVPVGAFLTAGVLTAGLISFRQGNSQLGQKLMRARV 60

Query: 446 LVQGGTVALMVGSAYYYGDN 387
           +VQG TVALMVG+AYYYG+N
Sbjct: 61  VVQGATVALMVGTAYYYGEN 80


>dbj|BAF01465.1| hypothetical protein [Arabidopsis thaliana]
          Length = 95

 Score =  114 bits (286), Expect = 3e-23
 Identities = 56/83 (67%), Positives = 69/83 (83%)
 Frame = -3

Query: 635 SLRLKNMASTDSKMDSIFPDNKRHRNRLVPIGAFLTAGVLTAGLISFKQGNSQLGQQLMR 456
           +L L+ M+S +  M+ +F + KR RN LVP+GA +TAGVLTAGLISF++GNSQLGQ LMR
Sbjct: 9   TLVLEKMSSVEPDMEDLFQEKKRVRNPLVPLGALMTAGVLTAGLISFRRGNSQLGQVLMR 68

Query: 455 ARVLVQGGTVALMVGSAYYYGDN 387
           ARV+VQG TVALMVG+ YYYGDN
Sbjct: 69  ARVVVQGATVALMVGTGYYYGDN 91


>ref|XP_004152465.1| PREDICTED: RING-H2 finger protein ATL48-like [Cucumis sativus]
           gi|449487774|ref|XP_004157794.1| PREDICTED: RING-H2
           finger protein ATL48-like [Cucumis sativus]
          Length = 82

 Score =  113 bits (282), Expect = 7e-23
 Identities = 59/93 (63%), Positives = 68/93 (73%)
 Frame = -3

Query: 617 MASTDSKMDSIFPDNKRHRNRLVPIGAFLTAGVLTAGLISFKQGNSQLGQQLMRARVLVQ 438
           M+S +  +D  F + KR RN LVPIGA  TAGVLTAGLISF++GNSQLGQ LMRARV+VQ
Sbjct: 1   MSSDEPNLDEFFVEKKRARNPLVPIGALATAGVLTAGLISFRRGNSQLGQMLMRARVVVQ 60

Query: 437 GGTVALMVGSAYYYGDNFKRAG*NVKPCPWTSS 339
           G TVALMVG+AYYYG+N           PW SS
Sbjct: 61  GATVALMVGTAYYYGEN-----------PWRSS 82


>gb|ADU04143.1| hypothetical protein [Gossypium hirsutum]
          Length = 82

 Score =  113 bits (282), Expect = 7e-23
 Identities = 58/93 (62%), Positives = 68/93 (73%)
 Frame = -3

Query: 617 MASTDSKMDSIFPDNKRHRNRLVPIGAFLTAGVLTAGLISFKQGNSQLGQQLMRARVLVQ 438
           M+S +   + +  + KR RN LVP+GA +TAGVLTAGLISF+QGNSQLGQ LMRARV+VQ
Sbjct: 1   MSSREPSFEELLEEKKRVRNPLVPVGALITAGVLTAGLISFRQGNSQLGQMLMRARVVVQ 60

Query: 437 GGTVALMVGSAYYYGDNFKRAG*NVKPCPWTSS 339
           G TVALMVG+AYYYGDN           PW SS
Sbjct: 61  GATVALMVGTAYYYGDN-----------PWKSS 82


>ref|XP_006404304.1| hypothetical protein EUTSA_v10010870mg [Eutrema salsugineum]
           gi|557105423|gb|ESQ45757.1| hypothetical protein
           EUTSA_v10010870mg [Eutrema salsugineum]
          Length = 81

 Score =  112 bits (281), Expect = 1e-22
 Identities = 54/77 (70%), Positives = 66/77 (85%)
 Frame = -3

Query: 617 MASTDSKMDSIFPDNKRHRNRLVPIGAFLTAGVLTAGLISFKQGNSQLGQQLMRARVLVQ 438
           M+S +  M+ +F + KR RN LVP+GA +TAGVLTAGLISF++GNSQ+GQ LMRARV+VQ
Sbjct: 1   MSSVEPDMEDLFQEKKRVRNPLVPLGALMTAGVLTAGLISFRRGNSQMGQVLMRARVVVQ 60

Query: 437 GGTVALMVGSAYYYGDN 387
           G TVALMVG+AYYYGDN
Sbjct: 61  GATVALMVGTAYYYGDN 77


>gb|ADU04138.1| hypothetical protein [Gossypium hirsutum]
          Length = 82

 Score =  112 bits (281), Expect = 1e-22
 Identities = 58/93 (62%), Positives = 68/93 (73%)
 Frame = -3

Query: 617 MASTDSKMDSIFPDNKRHRNRLVPIGAFLTAGVLTAGLISFKQGNSQLGQQLMRARVLVQ 438
           M+S +   + +  + KR RN LVP+GA +TAGVLTAGLISF+QGNSQLGQ LMRARV+VQ
Sbjct: 1   MSSGEPSFEELLEEKKRVRNPLVPVGALITAGVLTAGLISFRQGNSQLGQMLMRARVVVQ 60

Query: 437 GGTVALMVGSAYYYGDNFKRAG*NVKPCPWTSS 339
           G TVALMVG+AYYYGDN           PW SS
Sbjct: 61  GATVALMVGTAYYYGDN-----------PWKSS 82


>ref|XP_002877592.1| hypoxia-responsive family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297323430|gb|EFH53851.1| hypoxia-responsive
           family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 366

 Score =  112 bits (280), Expect = 1e-22
 Identities = 54/77 (70%), Positives = 66/77 (85%)
 Frame = -3

Query: 617 MASTDSKMDSIFPDNKRHRNRLVPIGAFLTAGVLTAGLISFKQGNSQLGQQLMRARVLVQ 438
           M++ +  M+ +F + KR RN LVP+GA +TAGVLTAGLISF++GNSQLGQ LMRARV+VQ
Sbjct: 1   MSAVEPDMEDLFQEKKRVRNPLVPLGALMTAGVLTAGLISFRRGNSQLGQVLMRARVVVQ 60

Query: 437 GGTVALMVGSAYYYGDN 387
           G TVALMVG+AYYYGDN
Sbjct: 61  GATVALMVGTAYYYGDN 77


>ref|NP_190386.1| RING-H2 finger protein ATL48 [Arabidopsis thaliana]
           gi|68565188|sp|Q7X843.2|ATL48_ARATH RecName:
           Full=RING-H2 finger protein ATL48; AltName:
           Full=YGHL1-C3HC4 RING fusion protein
           gi|4678325|emb|CAB41136.1| putative protein [Arabidopsis
           thaliana] gi|30038524|dbj|BAC75820.1| YGHL1-C3HC4 RING
           fusion protein [Arabidopsis thaliana]
           gi|332644837|gb|AEE78358.1| RING-H2 finger protein ATL48
           [Arabidopsis thaliana]
          Length = 349

 Score =  112 bits (279), Expect = 2e-22
 Identities = 54/77 (70%), Positives = 65/77 (84%)
 Frame = -3

Query: 617 MASTDSKMDSIFPDNKRHRNRLVPIGAFLTAGVLTAGLISFKQGNSQLGQQLMRARVLVQ 438
           M+S +  M+ +F + KR RN LVP+GA +TAGVLTAGLISF++GNSQLGQ LMRARV+VQ
Sbjct: 1   MSSVEPDMEDLFQEKKRVRNPLVPLGALMTAGVLTAGLISFRRGNSQLGQVLMRARVVVQ 60

Query: 437 GGTVALMVGSAYYYGDN 387
           G TVALMVG+ YYYGDN
Sbjct: 61  GATVALMVGTGYYYGDN 77


>gb|AAP40393.1| unknown protein [Arabidopsis thaliana] gi|30794087|gb|AAP40486.1|
           unknown protein [Arabidopsis thaliana]
          Length = 81

 Score =  112 bits (279), Expect = 2e-22
 Identities = 54/77 (70%), Positives = 65/77 (84%)
 Frame = -3

Query: 617 MASTDSKMDSIFPDNKRHRNRLVPIGAFLTAGVLTAGLISFKQGNSQLGQQLMRARVLVQ 438
           M+S +  M+ +F + KR RN LVP+GA +TAGVLTAGLISF++GNSQLGQ LMRARV+VQ
Sbjct: 1   MSSVEPDMEDLFQEKKRVRNPLVPLGALMTAGVLTAGLISFRRGNSQLGQVLMRARVVVQ 60

Query: 437 GGTVALMVGSAYYYGDN 387
           G TVALMVG+ YYYGDN
Sbjct: 61  GATVALMVGTGYYYGDN 77


>ref|XP_003633805.1| PREDICTED: RING-H2 finger protein ATL48-like [Vitis vinifera]
          Length = 80

 Score =  111 bits (278), Expect = 2e-22
 Identities = 54/79 (68%), Positives = 66/79 (83%)
 Frame = -3

Query: 626 LKNMASTDSKMDSIFPDNKRHRNRLVPIGAFLTAGVLTAGLISFKQGNSQLGQQLMRARV 447
           ++ M + DS+MD +F   KR +N LVPIGA LTAGVLTAGLISFK+GNS LGQ+LMRARV
Sbjct: 1   MEKMGTADSEMDQLFEQKKRVKNPLVPIGALLTAGVLTAGLISFKKGNSHLGQKLMRARV 60

Query: 446 LVQGGTVALMVGSAYYYGD 390
           +VQG TVALM+ +AYYYG+
Sbjct: 61  VVQGATVALMLSTAYYYGE 79


>ref|XP_006374514.1| hypothetical protein POPTR_0015s08460g [Populus trichocarpa]
           gi|550322312|gb|ERP52311.1| hypothetical protein
           POPTR_0015s08460g [Populus trichocarpa]
          Length = 101

 Score =  110 bits (276), Expect = 4e-22
 Identities = 53/86 (61%), Positives = 68/86 (79%)
 Frame = -3

Query: 644 RSRSLRLKNMASTDSKMDSIFPDNKRHRNRLVPIGAFLTAGVLTAGLISFKQGNSQLGQQ 465
           +  S  ++ M + +   + +F + KR RN LVP+GA +TAGVLTAGLISF++GNSQLGQ 
Sbjct: 10  QKESKLMEKMGTAEPNFEQLFEEKKRVRNPLVPVGALMTAGVLTAGLISFRRGNSQLGQV 69

Query: 464 LMRARVLVQGGTVALMVGSAYYYGDN 387
           LMRARV+VQG TVALMVG+A+YYGDN
Sbjct: 70  LMRARVVVQGATVALMVGTAFYYGDN 95


>ref|XP_006376844.1| hypothetical protein POPTR_0012s07940g [Populus trichocarpa]
           gi|566197355|ref|XP_006376845.1| hypothetical protein
           POPTR_0012s07940g [Populus trichocarpa]
           gi|118486764|gb|ABK95217.1| unknown [Populus
           trichocarpa] gi|550326625|gb|ERP54641.1| hypothetical
           protein POPTR_0012s07940g [Populus trichocarpa]
           gi|550326626|gb|ERP54642.1| hypothetical protein
           POPTR_0012s07940g [Populus trichocarpa]
          Length = 86

 Score =  110 bits (275), Expect = 5e-22
 Identities = 52/80 (65%), Positives = 66/80 (82%)
 Frame = -3

Query: 626 LKNMASTDSKMDSIFPDNKRHRNRLVPIGAFLTAGVLTAGLISFKQGNSQLGQQLMRARV 447
           ++ M + +   + +F + KR RN LVP+GA +TAGVLTAGLISF++GNSQLGQ LMRARV
Sbjct: 1   MEKMGTAEPNFEQLFEEKKRVRNPLVPVGALMTAGVLTAGLISFRRGNSQLGQVLMRARV 60

Query: 446 LVQGGTVALMVGSAYYYGDN 387
           +VQG TVALMVG+A+YYGDN
Sbjct: 61  VVQGATVALMVGTAFYYGDN 80


>emb|CBI34952.3| unnamed protein product [Vitis vinifera]
          Length = 77

 Score =  110 bits (275), Expect = 5e-22
 Identities = 54/76 (71%), Positives = 64/76 (84%)
 Frame = -3

Query: 617 MASTDSKMDSIFPDNKRHRNRLVPIGAFLTAGVLTAGLISFKQGNSQLGQQLMRARVLVQ 438
           M + DS+MD +F   KR +N LVPIGA LTAGVLTAGLISFK+GNS LGQ+LMRARV+VQ
Sbjct: 1   MGTADSEMDQLFEQKKRVKNPLVPIGALLTAGVLTAGLISFKKGNSHLGQKLMRARVVVQ 60

Query: 437 GGTVALMVGSAYYYGD 390
           G TVALM+ +AYYYG+
Sbjct: 61  GATVALMLSTAYYYGE 76


>ref|XP_003608947.1| RING-H2 finger protein ATL3I [Medicago truncatula]
           gi|355510002|gb|AES91144.1| RING-H2 finger protein ATL3I
           [Medicago truncatula] gi|388512809|gb|AFK44466.1|
           unknown [Medicago truncatula]
          Length = 82

 Score =  109 bits (272), Expect = 1e-21
 Identities = 54/77 (70%), Positives = 62/77 (80%)
 Frame = -3

Query: 617 MASTDSKMDSIFPDNKRHRNRLVPIGAFLTAGVLTAGLISFKQGNSQLGQQLMRARVLVQ 438
           M S +   +    + KR RN  VPIGA +TAGVLTAGLISF+QGNSQLGQ+LMRARV+VQ
Sbjct: 1   MGSPEPGFEDFLEEKKRVRNPFVPIGALITAGVLTAGLISFRQGNSQLGQKLMRARVVVQ 60

Query: 437 GGTVALMVGSAYYYGDN 387
           G TVALMVG+AYYYGDN
Sbjct: 61  GATVALMVGTAYYYGDN 77


>ref|XP_002318030.1| predicted protein [Populus trichocarpa]
           gi|224133480|ref|XP_002321578.1| predicted protein
           [Populus trichocarpa]
          Length = 81

 Score =  109 bits (272), Expect = 1e-21
 Identities = 52/77 (67%), Positives = 64/77 (83%)
 Frame = -3

Query: 617 MASTDSKMDSIFPDNKRHRNRLVPIGAFLTAGVLTAGLISFKQGNSQLGQQLMRARVLVQ 438
           M + +   + +F + KR RN LVP+GA +TAGVLTAGLISF++GNSQLGQ LMRARV+VQ
Sbjct: 1   MGTAEPNFEQLFEEKKRVRNPLVPVGALMTAGVLTAGLISFRRGNSQLGQVLMRARVVVQ 60

Query: 437 GGTVALMVGSAYYYGDN 387
           G TVALMVG+A+YYGDN
Sbjct: 61  GATVALMVGTAFYYGDN 77


>ref|XP_002511436.1| conserved hypothetical protein [Ricinus communis]
           gi|223550551|gb|EEF52038.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 83

 Score =  108 bits (271), Expect = 1e-21
 Identities = 55/93 (59%), Positives = 67/93 (72%)
 Frame = -3

Query: 617 MASTDSKMDSIFPDNKRHRNRLVPIGAFLTAGVLTAGLISFKQGNSQLGQQLMRARVLVQ 438
           M + +  ++ +F + KR RN LVP+GA +TAGVLTAGLISF++GNS LGQ LMRARV+VQ
Sbjct: 1   MGTAEPNLEQLFEEKKRVRNPLVPVGALMTAGVLTAGLISFRRGNSHLGQILMRARVVVQ 60

Query: 437 GGTVALMVGSAYYYGDNFKRAG*NVKPCPWTSS 339
           G TVALMVG+AYYYGD            PWT S
Sbjct: 61  GATVALMVGTAYYYGDT-----------PWTKS 82


>gb|EOY20653.1| Hypoxia-responsive family protein / zinc finger (C3HC4-type RING
           finger) family protein [Theobroma cacao]
          Length = 82

 Score =  108 bits (270), Expect = 2e-21
 Identities = 52/77 (67%), Positives = 63/77 (81%)
 Frame = -3

Query: 617 MASTDSKMDSIFPDNKRHRNRLVPIGAFLTAGVLTAGLISFKQGNSQLGQQLMRARVLVQ 438
           M + +  ++    + KR RN LVP+GA +TAGVLTAGLISF+QGNS+LGQ LMRARV+VQ
Sbjct: 1   MGAVEPSLEEFLEEKKRVRNPLVPVGALITAGVLTAGLISFRQGNSRLGQVLMRARVVVQ 60

Query: 437 GGTVALMVGSAYYYGDN 387
           G TVALMVG+AYYYGDN
Sbjct: 61  GATVALMVGTAYYYGDN 77


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