BLASTX nr result
ID: Atropa21_contig00003350
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00003350
(733 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004251219.1| PREDICTED: RING-H2 finger protein ATL48-like... 155 2e-35
ref|XP_006340323.1| PREDICTED: RING-H2 finger protein ATL48-like... 152 8e-35
ref|XP_006290393.1| hypothetical protein CARUB_v10018327mg [Caps... 115 1e-23
ref|XP_004298925.1| PREDICTED: RING-H2 finger protein ATL48-like... 114 3e-23
dbj|BAF01465.1| hypothetical protein [Arabidopsis thaliana] 114 3e-23
ref|XP_004152465.1| PREDICTED: RING-H2 finger protein ATL48-like... 113 7e-23
gb|ADU04143.1| hypothetical protein [Gossypium hirsutum] 113 7e-23
ref|XP_006404304.1| hypothetical protein EUTSA_v10010870mg [Eutr... 112 1e-22
gb|ADU04138.1| hypothetical protein [Gossypium hirsutum] 112 1e-22
ref|XP_002877592.1| hypoxia-responsive family protein [Arabidops... 112 1e-22
ref|NP_190386.1| RING-H2 finger protein ATL48 [Arabidopsis thali... 112 2e-22
gb|AAP40393.1| unknown protein [Arabidopsis thaliana] gi|3079408... 112 2e-22
ref|XP_003633805.1| PREDICTED: RING-H2 finger protein ATL48-like... 111 2e-22
ref|XP_006374514.1| hypothetical protein POPTR_0015s08460g [Popu... 110 4e-22
ref|XP_006376844.1| hypothetical protein POPTR_0012s07940g [Popu... 110 5e-22
emb|CBI34952.3| unnamed protein product [Vitis vinifera] 110 5e-22
ref|XP_003608947.1| RING-H2 finger protein ATL3I [Medicago trunc... 109 1e-21
ref|XP_002318030.1| predicted protein [Populus trichocarpa] gi|2... 109 1e-21
ref|XP_002511436.1| conserved hypothetical protein [Ricinus comm... 108 1e-21
gb|EOY20653.1| Hypoxia-responsive family protein / zinc finger (... 108 2e-21
>ref|XP_004251219.1| PREDICTED: RING-H2 finger protein ATL48-like [Solanum lycopersicum]
Length = 82
Score = 155 bits (391), Expect = 2e-35
Identities = 77/82 (93%), Positives = 80/82 (97%)
Frame = -3
Query: 617 MASTDSKMDSIFPDNKRHRNRLVPIGAFLTAGVLTAGLISFKQGNSQLGQQLMRARVLVQ 438
M STDS++DSIF DNKRHRNRLVPIGAFLTAGVLTAGLISFK+GNSQLGQQLMRARVLVQ
Sbjct: 1 MGSTDSELDSIFQDNKRHRNRLVPIGAFLTAGVLTAGLISFKRGNSQLGQQLMRARVLVQ 60
Query: 437 GGTVALMVGSAYYYGDNFKRAG 372
GGTVALMVGSAYYYGDNFKRAG
Sbjct: 61 GGTVALMVGSAYYYGDNFKRAG 82
>ref|XP_006340323.1| PREDICTED: RING-H2 finger protein ATL48-like [Solanum tuberosum]
Length = 82
Score = 152 bits (385), Expect = 8e-35
Identities = 76/82 (92%), Positives = 79/82 (96%)
Frame = -3
Query: 617 MASTDSKMDSIFPDNKRHRNRLVPIGAFLTAGVLTAGLISFKQGNSQLGQQLMRARVLVQ 438
M STDS++DSIF D KRHRNRLVPIGAFLTAGVLTAGLISFK+GNSQLGQQLMRARVLVQ
Sbjct: 1 MGSTDSELDSIFQDKKRHRNRLVPIGAFLTAGVLTAGLISFKRGNSQLGQQLMRARVLVQ 60
Query: 437 GGTVALMVGSAYYYGDNFKRAG 372
GGTVALMVGSAYYYGDNFKRAG
Sbjct: 61 GGTVALMVGSAYYYGDNFKRAG 82
>ref|XP_006290393.1| hypothetical protein CARUB_v10018327mg [Capsella rubella]
gi|482559100|gb|EOA23291.1| hypothetical protein
CARUB_v10018327mg [Capsella rubella]
Length = 86
Score = 115 bits (289), Expect = 1e-23
Identities = 54/80 (67%), Positives = 69/80 (86%)
Frame = -3
Query: 626 LKNMASTDSKMDSIFPDNKRHRNRLVPIGAFLTAGVLTAGLISFKQGNSQLGQQLMRARV 447
++ M++ + M+ +F D KR+RN LVP+GA +TAGVLTAGLISF++GNSQ+GQ LMRARV
Sbjct: 3 VEKMSAVEPDMEDLFQDKKRYRNPLVPLGALMTAGVLTAGLISFRRGNSQMGQVLMRARV 62
Query: 446 LVQGGTVALMVGSAYYYGDN 387
+VQG TVALMVG+AYYYGDN
Sbjct: 63 VVQGATVALMVGTAYYYGDN 82
>ref|XP_004298925.1| PREDICTED: RING-H2 finger protein ATL48-like [Fragaria vesca subsp.
vesca]
Length = 85
Score = 114 bits (286), Expect = 3e-23
Identities = 54/80 (67%), Positives = 67/80 (83%)
Frame = -3
Query: 626 LKNMASTDSKMDSIFPDNKRHRNRLVPIGAFLTAGVLTAGLISFKQGNSQLGQQLMRARV 447
++ M + ++ F + KR +N LVP+GAFLTAGVLTAGLISF+QGNSQLGQ+LMRARV
Sbjct: 1 MEKMGEVEPSLEVFFEEKKRKKNPLVPVGAFLTAGVLTAGLISFRQGNSQLGQKLMRARV 60
Query: 446 LVQGGTVALMVGSAYYYGDN 387
+VQG TVALMVG+AYYYG+N
Sbjct: 61 VVQGATVALMVGTAYYYGEN 80
>dbj|BAF01465.1| hypothetical protein [Arabidopsis thaliana]
Length = 95
Score = 114 bits (286), Expect = 3e-23
Identities = 56/83 (67%), Positives = 69/83 (83%)
Frame = -3
Query: 635 SLRLKNMASTDSKMDSIFPDNKRHRNRLVPIGAFLTAGVLTAGLISFKQGNSQLGQQLMR 456
+L L+ M+S + M+ +F + KR RN LVP+GA +TAGVLTAGLISF++GNSQLGQ LMR
Sbjct: 9 TLVLEKMSSVEPDMEDLFQEKKRVRNPLVPLGALMTAGVLTAGLISFRRGNSQLGQVLMR 68
Query: 455 ARVLVQGGTVALMVGSAYYYGDN 387
ARV+VQG TVALMVG+ YYYGDN
Sbjct: 69 ARVVVQGATVALMVGTGYYYGDN 91
>ref|XP_004152465.1| PREDICTED: RING-H2 finger protein ATL48-like [Cucumis sativus]
gi|449487774|ref|XP_004157794.1| PREDICTED: RING-H2
finger protein ATL48-like [Cucumis sativus]
Length = 82
Score = 113 bits (282), Expect = 7e-23
Identities = 59/93 (63%), Positives = 68/93 (73%)
Frame = -3
Query: 617 MASTDSKMDSIFPDNKRHRNRLVPIGAFLTAGVLTAGLISFKQGNSQLGQQLMRARVLVQ 438
M+S + +D F + KR RN LVPIGA TAGVLTAGLISF++GNSQLGQ LMRARV+VQ
Sbjct: 1 MSSDEPNLDEFFVEKKRARNPLVPIGALATAGVLTAGLISFRRGNSQLGQMLMRARVVVQ 60
Query: 437 GGTVALMVGSAYYYGDNFKRAG*NVKPCPWTSS 339
G TVALMVG+AYYYG+N PW SS
Sbjct: 61 GATVALMVGTAYYYGEN-----------PWRSS 82
>gb|ADU04143.1| hypothetical protein [Gossypium hirsutum]
Length = 82
Score = 113 bits (282), Expect = 7e-23
Identities = 58/93 (62%), Positives = 68/93 (73%)
Frame = -3
Query: 617 MASTDSKMDSIFPDNKRHRNRLVPIGAFLTAGVLTAGLISFKQGNSQLGQQLMRARVLVQ 438
M+S + + + + KR RN LVP+GA +TAGVLTAGLISF+QGNSQLGQ LMRARV+VQ
Sbjct: 1 MSSREPSFEELLEEKKRVRNPLVPVGALITAGVLTAGLISFRQGNSQLGQMLMRARVVVQ 60
Query: 437 GGTVALMVGSAYYYGDNFKRAG*NVKPCPWTSS 339
G TVALMVG+AYYYGDN PW SS
Sbjct: 61 GATVALMVGTAYYYGDN-----------PWKSS 82
>ref|XP_006404304.1| hypothetical protein EUTSA_v10010870mg [Eutrema salsugineum]
gi|557105423|gb|ESQ45757.1| hypothetical protein
EUTSA_v10010870mg [Eutrema salsugineum]
Length = 81
Score = 112 bits (281), Expect = 1e-22
Identities = 54/77 (70%), Positives = 66/77 (85%)
Frame = -3
Query: 617 MASTDSKMDSIFPDNKRHRNRLVPIGAFLTAGVLTAGLISFKQGNSQLGQQLMRARVLVQ 438
M+S + M+ +F + KR RN LVP+GA +TAGVLTAGLISF++GNSQ+GQ LMRARV+VQ
Sbjct: 1 MSSVEPDMEDLFQEKKRVRNPLVPLGALMTAGVLTAGLISFRRGNSQMGQVLMRARVVVQ 60
Query: 437 GGTVALMVGSAYYYGDN 387
G TVALMVG+AYYYGDN
Sbjct: 61 GATVALMVGTAYYYGDN 77
>gb|ADU04138.1| hypothetical protein [Gossypium hirsutum]
Length = 82
Score = 112 bits (281), Expect = 1e-22
Identities = 58/93 (62%), Positives = 68/93 (73%)
Frame = -3
Query: 617 MASTDSKMDSIFPDNKRHRNRLVPIGAFLTAGVLTAGLISFKQGNSQLGQQLMRARVLVQ 438
M+S + + + + KR RN LVP+GA +TAGVLTAGLISF+QGNSQLGQ LMRARV+VQ
Sbjct: 1 MSSGEPSFEELLEEKKRVRNPLVPVGALITAGVLTAGLISFRQGNSQLGQMLMRARVVVQ 60
Query: 437 GGTVALMVGSAYYYGDNFKRAG*NVKPCPWTSS 339
G TVALMVG+AYYYGDN PW SS
Sbjct: 61 GATVALMVGTAYYYGDN-----------PWKSS 82
>ref|XP_002877592.1| hypoxia-responsive family protein [Arabidopsis lyrata subsp.
lyrata] gi|297323430|gb|EFH53851.1| hypoxia-responsive
family protein [Arabidopsis lyrata subsp. lyrata]
Length = 366
Score = 112 bits (280), Expect = 1e-22
Identities = 54/77 (70%), Positives = 66/77 (85%)
Frame = -3
Query: 617 MASTDSKMDSIFPDNKRHRNRLVPIGAFLTAGVLTAGLISFKQGNSQLGQQLMRARVLVQ 438
M++ + M+ +F + KR RN LVP+GA +TAGVLTAGLISF++GNSQLGQ LMRARV+VQ
Sbjct: 1 MSAVEPDMEDLFQEKKRVRNPLVPLGALMTAGVLTAGLISFRRGNSQLGQVLMRARVVVQ 60
Query: 437 GGTVALMVGSAYYYGDN 387
G TVALMVG+AYYYGDN
Sbjct: 61 GATVALMVGTAYYYGDN 77
>ref|NP_190386.1| RING-H2 finger protein ATL48 [Arabidopsis thaliana]
gi|68565188|sp|Q7X843.2|ATL48_ARATH RecName:
Full=RING-H2 finger protein ATL48; AltName:
Full=YGHL1-C3HC4 RING fusion protein
gi|4678325|emb|CAB41136.1| putative protein [Arabidopsis
thaliana] gi|30038524|dbj|BAC75820.1| YGHL1-C3HC4 RING
fusion protein [Arabidopsis thaliana]
gi|332644837|gb|AEE78358.1| RING-H2 finger protein ATL48
[Arabidopsis thaliana]
Length = 349
Score = 112 bits (279), Expect = 2e-22
Identities = 54/77 (70%), Positives = 65/77 (84%)
Frame = -3
Query: 617 MASTDSKMDSIFPDNKRHRNRLVPIGAFLTAGVLTAGLISFKQGNSQLGQQLMRARVLVQ 438
M+S + M+ +F + KR RN LVP+GA +TAGVLTAGLISF++GNSQLGQ LMRARV+VQ
Sbjct: 1 MSSVEPDMEDLFQEKKRVRNPLVPLGALMTAGVLTAGLISFRRGNSQLGQVLMRARVVVQ 60
Query: 437 GGTVALMVGSAYYYGDN 387
G TVALMVG+ YYYGDN
Sbjct: 61 GATVALMVGTGYYYGDN 77
>gb|AAP40393.1| unknown protein [Arabidopsis thaliana] gi|30794087|gb|AAP40486.1|
unknown protein [Arabidopsis thaliana]
Length = 81
Score = 112 bits (279), Expect = 2e-22
Identities = 54/77 (70%), Positives = 65/77 (84%)
Frame = -3
Query: 617 MASTDSKMDSIFPDNKRHRNRLVPIGAFLTAGVLTAGLISFKQGNSQLGQQLMRARVLVQ 438
M+S + M+ +F + KR RN LVP+GA +TAGVLTAGLISF++GNSQLGQ LMRARV+VQ
Sbjct: 1 MSSVEPDMEDLFQEKKRVRNPLVPLGALMTAGVLTAGLISFRRGNSQLGQVLMRARVVVQ 60
Query: 437 GGTVALMVGSAYYYGDN 387
G TVALMVG+ YYYGDN
Sbjct: 61 GATVALMVGTGYYYGDN 77
>ref|XP_003633805.1| PREDICTED: RING-H2 finger protein ATL48-like [Vitis vinifera]
Length = 80
Score = 111 bits (278), Expect = 2e-22
Identities = 54/79 (68%), Positives = 66/79 (83%)
Frame = -3
Query: 626 LKNMASTDSKMDSIFPDNKRHRNRLVPIGAFLTAGVLTAGLISFKQGNSQLGQQLMRARV 447
++ M + DS+MD +F KR +N LVPIGA LTAGVLTAGLISFK+GNS LGQ+LMRARV
Sbjct: 1 MEKMGTADSEMDQLFEQKKRVKNPLVPIGALLTAGVLTAGLISFKKGNSHLGQKLMRARV 60
Query: 446 LVQGGTVALMVGSAYYYGD 390
+VQG TVALM+ +AYYYG+
Sbjct: 61 VVQGATVALMLSTAYYYGE 79
>ref|XP_006374514.1| hypothetical protein POPTR_0015s08460g [Populus trichocarpa]
gi|550322312|gb|ERP52311.1| hypothetical protein
POPTR_0015s08460g [Populus trichocarpa]
Length = 101
Score = 110 bits (276), Expect = 4e-22
Identities = 53/86 (61%), Positives = 68/86 (79%)
Frame = -3
Query: 644 RSRSLRLKNMASTDSKMDSIFPDNKRHRNRLVPIGAFLTAGVLTAGLISFKQGNSQLGQQ 465
+ S ++ M + + + +F + KR RN LVP+GA +TAGVLTAGLISF++GNSQLGQ
Sbjct: 10 QKESKLMEKMGTAEPNFEQLFEEKKRVRNPLVPVGALMTAGVLTAGLISFRRGNSQLGQV 69
Query: 464 LMRARVLVQGGTVALMVGSAYYYGDN 387
LMRARV+VQG TVALMVG+A+YYGDN
Sbjct: 70 LMRARVVVQGATVALMVGTAFYYGDN 95
>ref|XP_006376844.1| hypothetical protein POPTR_0012s07940g [Populus trichocarpa]
gi|566197355|ref|XP_006376845.1| hypothetical protein
POPTR_0012s07940g [Populus trichocarpa]
gi|118486764|gb|ABK95217.1| unknown [Populus
trichocarpa] gi|550326625|gb|ERP54641.1| hypothetical
protein POPTR_0012s07940g [Populus trichocarpa]
gi|550326626|gb|ERP54642.1| hypothetical protein
POPTR_0012s07940g [Populus trichocarpa]
Length = 86
Score = 110 bits (275), Expect = 5e-22
Identities = 52/80 (65%), Positives = 66/80 (82%)
Frame = -3
Query: 626 LKNMASTDSKMDSIFPDNKRHRNRLVPIGAFLTAGVLTAGLISFKQGNSQLGQQLMRARV 447
++ M + + + +F + KR RN LVP+GA +TAGVLTAGLISF++GNSQLGQ LMRARV
Sbjct: 1 MEKMGTAEPNFEQLFEEKKRVRNPLVPVGALMTAGVLTAGLISFRRGNSQLGQVLMRARV 60
Query: 446 LVQGGTVALMVGSAYYYGDN 387
+VQG TVALMVG+A+YYGDN
Sbjct: 61 VVQGATVALMVGTAFYYGDN 80
>emb|CBI34952.3| unnamed protein product [Vitis vinifera]
Length = 77
Score = 110 bits (275), Expect = 5e-22
Identities = 54/76 (71%), Positives = 64/76 (84%)
Frame = -3
Query: 617 MASTDSKMDSIFPDNKRHRNRLVPIGAFLTAGVLTAGLISFKQGNSQLGQQLMRARVLVQ 438
M + DS+MD +F KR +N LVPIGA LTAGVLTAGLISFK+GNS LGQ+LMRARV+VQ
Sbjct: 1 MGTADSEMDQLFEQKKRVKNPLVPIGALLTAGVLTAGLISFKKGNSHLGQKLMRARVVVQ 60
Query: 437 GGTVALMVGSAYYYGD 390
G TVALM+ +AYYYG+
Sbjct: 61 GATVALMLSTAYYYGE 76
>ref|XP_003608947.1| RING-H2 finger protein ATL3I [Medicago truncatula]
gi|355510002|gb|AES91144.1| RING-H2 finger protein ATL3I
[Medicago truncatula] gi|388512809|gb|AFK44466.1|
unknown [Medicago truncatula]
Length = 82
Score = 109 bits (272), Expect = 1e-21
Identities = 54/77 (70%), Positives = 62/77 (80%)
Frame = -3
Query: 617 MASTDSKMDSIFPDNKRHRNRLVPIGAFLTAGVLTAGLISFKQGNSQLGQQLMRARVLVQ 438
M S + + + KR RN VPIGA +TAGVLTAGLISF+QGNSQLGQ+LMRARV+VQ
Sbjct: 1 MGSPEPGFEDFLEEKKRVRNPFVPIGALITAGVLTAGLISFRQGNSQLGQKLMRARVVVQ 60
Query: 437 GGTVALMVGSAYYYGDN 387
G TVALMVG+AYYYGDN
Sbjct: 61 GATVALMVGTAYYYGDN 77
>ref|XP_002318030.1| predicted protein [Populus trichocarpa]
gi|224133480|ref|XP_002321578.1| predicted protein
[Populus trichocarpa]
Length = 81
Score = 109 bits (272), Expect = 1e-21
Identities = 52/77 (67%), Positives = 64/77 (83%)
Frame = -3
Query: 617 MASTDSKMDSIFPDNKRHRNRLVPIGAFLTAGVLTAGLISFKQGNSQLGQQLMRARVLVQ 438
M + + + +F + KR RN LVP+GA +TAGVLTAGLISF++GNSQLGQ LMRARV+VQ
Sbjct: 1 MGTAEPNFEQLFEEKKRVRNPLVPVGALMTAGVLTAGLISFRRGNSQLGQVLMRARVVVQ 60
Query: 437 GGTVALMVGSAYYYGDN 387
G TVALMVG+A+YYGDN
Sbjct: 61 GATVALMVGTAFYYGDN 77
>ref|XP_002511436.1| conserved hypothetical protein [Ricinus communis]
gi|223550551|gb|EEF52038.1| conserved hypothetical
protein [Ricinus communis]
Length = 83
Score = 108 bits (271), Expect = 1e-21
Identities = 55/93 (59%), Positives = 67/93 (72%)
Frame = -3
Query: 617 MASTDSKMDSIFPDNKRHRNRLVPIGAFLTAGVLTAGLISFKQGNSQLGQQLMRARVLVQ 438
M + + ++ +F + KR RN LVP+GA +TAGVLTAGLISF++GNS LGQ LMRARV+VQ
Sbjct: 1 MGTAEPNLEQLFEEKKRVRNPLVPVGALMTAGVLTAGLISFRRGNSHLGQILMRARVVVQ 60
Query: 437 GGTVALMVGSAYYYGDNFKRAG*NVKPCPWTSS 339
G TVALMVG+AYYYGD PWT S
Sbjct: 61 GATVALMVGTAYYYGDT-----------PWTKS 82
>gb|EOY20653.1| Hypoxia-responsive family protein / zinc finger (C3HC4-type RING
finger) family protein [Theobroma cacao]
Length = 82
Score = 108 bits (270), Expect = 2e-21
Identities = 52/77 (67%), Positives = 63/77 (81%)
Frame = -3
Query: 617 MASTDSKMDSIFPDNKRHRNRLVPIGAFLTAGVLTAGLISFKQGNSQLGQQLMRARVLVQ 438
M + + ++ + KR RN LVP+GA +TAGVLTAGLISF+QGNS+LGQ LMRARV+VQ
Sbjct: 1 MGAVEPSLEEFLEEKKRVRNPLVPVGALITAGVLTAGLISFRQGNSRLGQVLMRARVVVQ 60
Query: 437 GGTVALMVGSAYYYGDN 387
G TVALMVG+AYYYGDN
Sbjct: 61 GATVALMVGTAYYYGDN 77