BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00003186
         (559 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004245902.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop...   221   7e-56
ref|XP_006352864.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop...   207   2e-51
ref|XP_002279685.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor...   169   3e-40
emb|CBI33876.3| unnamed protein product [Vitis vinifera]              165   6e-39
gb|EOY23976.1| RNA-binding family protein isoform 2 [Theobroma c...   148   8e-34
gb|EOY23975.1| RNA-binding family protein isoform 1 [Theobroma c...   148   8e-34
ref|XP_006410699.1| hypothetical protein EUTSA_v10016986mg [Eutr...   147   2e-33
ref|XP_006294626.1| hypothetical protein CARUB_v10023663mg [Caps...   147   2e-33
ref|XP_002326529.1| predicted protein [Populus trichocarpa] gi|5...   145   9e-33
gb|ABK96729.1| unknown [Populus trichocarpa x Populus deltoides]      145   9e-33
gb|EMJ10617.1| hypothetical protein PRUPE_ppa009362mg [Prunus pe...   144   1e-32
ref|XP_002879549.1| hypothetical protein ARALYDRAFT_482506 [Arab...   142   6e-32
ref|NP_001242808.1| uncharacterized protein LOC100793319 [Glycin...   141   9e-32
ref|XP_002527668.1| ribonucleoprotein, chloroplast, putative [Ri...   141   9e-32
ref|NP_181084.1| RNA-binding (RRM/RBD/RNP motifs) family protein...   141   1e-31
ref|XP_004301780.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop...   140   2e-31
ref|XP_004164674.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   139   5e-31
ref|XP_004148763.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor...   139   5e-31
gb|EXB32996.1| 31 kDa ribonucleoprotein [Morus notabilis]             137   1e-30
ref|XP_003534278.1| PREDICTED: 29 kDa ribonucleoprotein, chlorop...   137   2e-30

>ref|XP_004245902.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Solanum
           lycopersicum]
          Length = 285

 Score =  221 bits (564), Expect = 7e-56
 Identities = 123/171 (71%), Positives = 131/171 (76%), Gaps = 4/171 (2%)
 Frame = +2

Query: 59  KFPLLPNSSPSIKLHNSTNVPNLSLKSIIYPF-LPSRKQQWSQLYCSXXXXXXXXXXXXX 235
           KFPL PNS   IKL N  +  NLSLKSI+YP  LPSRKQ  +QL+CS             
Sbjct: 23  KFPLFPNS---IKLQNYNHSLNLSLKSILYPLPLPSRKQ-CTQLHCSAVEVTEPVTVQEE 78

Query: 236 XXXKTQKGNQRRKLFVLNLPWSLTVPDIKTLFGEYGIVDDVEIIKTKDGKSRGFAFVTMS 415
              K QK NQRRKLFVLNLPWSLTV DIK +F E GIVDDVEIIKTKDGKSRGFAFVTMS
Sbjct: 79  KTEKPQKNNQRRKLFVLNLPWSLTVADIKNIFAECGIVDDVEIIKTKDGKSRGFAFVTMS 138

Query: 416 TGEEAQAAIDKLDAYELSGRIIRVEFAKRFKKPPGASP---PPQGETRHKL 559
           +GEEAQAAIDKLD+YE+SGRIIRVEFAKRFKKPPGA P   PPQGE RHKL
Sbjct: 139 SGEEAQAAIDKLDSYEVSGRIIRVEFAKRFKKPPGAPPPSTPPQGEARHKL 189



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
 Frame = +2

Query: 254 KGNQRRKLFVLNLPWSLTVPDIKTLFGEYGIVDDVEII-KTKDGKSRGFAFVTMSTGEEA 430
           +G  R KL+V NL W +    ++  F          ++     G++ G+ FVT  T E+A
Sbjct: 182 QGEARHKLYVSNLAWKVRSTQLREFFSANNNPISARVVFDNASGRAAGYGFVTFDTKEQA 241

Query: 431 QAAIDKLDAYELSGRIIRVEFAKR 502
           +AA+  LD  EL GR IR++F++R
Sbjct: 242 EAALSALDGKELMGRPIRLKFSER 265


>ref|XP_006352864.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Solanum
           tuberosum]
          Length = 284

 Score =  207 bits (526), Expect = 2e-51
 Identities = 121/171 (70%), Positives = 129/171 (75%), Gaps = 4/171 (2%)
 Frame = +2

Query: 59  KFPLLPNSSPSIKLHNSTNVPNLSLKSIIYPFLPSRKQQWSQLYCSXXXXXXXXXXXXXX 238
           KFPL PNS   IKL NS +  NLSLKSI+ P L SRKQ  SQL+CS              
Sbjct: 24  KFPLFPNS---IKLQNSNHSLNLSLKSIL-PLL-SRKQ-CSQLHCSAVEVTEPVTVQEEE 77

Query: 239 XX-KTQKGNQRRKLFVLNLPWSLTVPDIKTLFGEYGIVDDVEIIKTKDGKSRGFAFVTMS 415
              K QK N RRKLFVLNLPWSLTVPDIK +F E GIVDDVEIIKT+DGKSRGFAFVTMS
Sbjct: 78  KTEKPQKNNLRRKLFVLNLPWSLTVPDIKNIFAECGIVDDVEIIKTEDGKSRGFAFVTMS 137

Query: 416 TGEEAQAAIDKLDAYELSGRIIRVEFAKRFKKPPGASP---PPQGETRHKL 559
           +GEEAQAAIDKLD+YE+ GRIIRVEFAKRFKKPPGA P   PPQGE RHKL
Sbjct: 138 SGEEAQAAIDKLDSYEVLGRIIRVEFAKRFKKPPGAPPPSTPPQGEARHKL 188



 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
 Frame = +2

Query: 254 KGNQRRKLFVLNLPWSLTVPDIKTLF-GEYGIVDDVEIIKTKDGKSRGFAFVTMSTGEEA 430
           +G  R KL+V NL W +    ++  F   Y  +    I     G++ G+ FV+  T E+A
Sbjct: 181 QGEARHKLYVSNLAWKVRSTQLREFFSANYNPISARVIFDNASGRAAGYGFVSFDTKEQA 240

Query: 431 QAAIDKLDAYELSGRIIRVEFAKR 502
           +AA+  LD  EL GR IR++F++R
Sbjct: 241 EAAVSALDGKELMGRPIRLKFSER 264


>ref|XP_002279685.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic [Vitis
           vinifera]
          Length = 288

 Score =  169 bits (429), Expect = 3e-40
 Identities = 92/163 (56%), Positives = 111/163 (68%), Gaps = 5/163 (3%)
 Frame = +2

Query: 86  PSIKLHNSTNVPNLSLKSIIYPFLPSRKQQWSQLYCSXXXXXXXXXXXXXXXXKTQKGNQ 265
           PS+ LH+S  +P++ LK  +YP LP      +  +                  +TQ+ NQ
Sbjct: 29  PSMSLHSSAFIPSICLKYPLYP-LPLLYTNPTTKFSFELCSSVQEIEVEAKPEQTQEPNQ 87

Query: 266 RRKLFVLNLPWSLTVPDIKTLFGEYGIVDDVEIIKTKDGKSRGFAFVTMSTGEEAQAAID 445
           +RKLFVLNLPWSL+V DIK LFGE G V DVEIIK KDG+SRG+AFVTM +GEEAQA ++
Sbjct: 88  KRKLFVLNLPWSLSVVDIKNLFGECGTVTDVEIIKQKDGRSRGYAFVTMDSGEEAQAVVE 147

Query: 446 KLDAYELSGRIIRVEFAKRFKK-----PPGASPPPQGETRHKL 559
           K D+YELSGRIIRVEFAKRFKK     PP  + PP GETRHKL
Sbjct: 148 KFDSYELSGRIIRVEFAKRFKKPSPPPPPPPAGPPAGETRHKL 190


>emb|CBI33876.3| unnamed protein product [Vitis vinifera]
          Length = 258

 Score =  165 bits (418), Expect = 6e-39
 Identities = 90/161 (55%), Positives = 109/161 (67%), Gaps = 5/161 (3%)
 Frame = +2

Query: 92  IKLHNSTNVPNLSLKSIIYPFLPSRKQQWSQLYCSXXXXXXXXXXXXXXXXKTQKGNQRR 271
           + LH+S  +P++ LK  +YP LP      +  +                  +TQ+ NQ+R
Sbjct: 1   MSLHSSAFIPSICLKYPLYP-LPLLYTNPTTKFSFELCSSVQEIEVEAKPEQTQEPNQKR 59

Query: 272 KLFVLNLPWSLTVPDIKTLFGEYGIVDDVEIIKTKDGKSRGFAFVTMSTGEEAQAAIDKL 451
           KLFVLNLPWSL+V DIK LFGE G V DVEIIK KDG+SRG+AFVTM +GEEAQA ++K 
Sbjct: 60  KLFVLNLPWSLSVVDIKNLFGECGTVTDVEIIKQKDGRSRGYAFVTMDSGEEAQAVVEKF 119

Query: 452 DAYELSGRIIRVEFAKRFKK-----PPGASPPPQGETRHKL 559
           D+YELSGRIIRVEFAKRFKK     PP  + PP GETRHKL
Sbjct: 120 DSYELSGRIIRVEFAKRFKKPSPPPPPPPAGPPAGETRHKL 160


>gb|EOY23976.1| RNA-binding family protein isoform 2 [Theobroma cacao]
          Length = 248

 Score =  148 bits (374), Expect = 8e-34
 Identities = 76/107 (71%), Positives = 87/107 (81%), Gaps = 2/107 (1%)
 Frame = +2

Query: 245 KTQKGNQRRKLFVLNLPWSLTVPDIKTLFGEYGIVDDVEIIKTKDGKSRGFAFVTMSTGE 424
           KTQK N +RKLFVLNLPWS TV DIK LFG+ G V DVEIIK KDG+SR FAFVTM++GE
Sbjct: 80  KTQKSNVKRKLFVLNLPWSYTVADIKDLFGQCGNVTDVEIIKQKDGRSRNFAFVTMASGE 139

Query: 425 EAQAAIDKLDAYELSGRIIRVEFAKRFKKPPGASPP--PQGETRHKL 559
           EAQAA+DKLD++E+S RIIRVEFA+RFKKP  +  P  P  ET HKL
Sbjct: 140 EAQAAVDKLDSHEVSARIIRVEFARRFKKPSPSPQPIVPPRETHHKL 186


>gb|EOY23975.1| RNA-binding family protein isoform 1 [Theobroma cacao]
          Length = 281

 Score =  148 bits (374), Expect = 8e-34
 Identities = 76/107 (71%), Positives = 87/107 (81%), Gaps = 2/107 (1%)
 Frame = +2

Query: 245 KTQKGNQRRKLFVLNLPWSLTVPDIKTLFGEYGIVDDVEIIKTKDGKSRGFAFVTMSTGE 424
           KTQK N +RKLFVLNLPWS TV DIK LFG+ G V DVEIIK KDG+SR FAFVTM++GE
Sbjct: 80  KTQKSNVKRKLFVLNLPWSYTVADIKDLFGQCGNVTDVEIIKQKDGRSRNFAFVTMASGE 139

Query: 425 EAQAAIDKLDAYELSGRIIRVEFAKRFKKPPGASPP--PQGETRHKL 559
           EAQAA+DKLD++E+S RIIRVEFA+RFKKP  +  P  P  ET HKL
Sbjct: 140 EAQAAVDKLDSHEVSARIIRVEFARRFKKPSPSPQPIVPPRETHHKL 186



 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 29/77 (37%), Positives = 44/77 (57%)
 Frame = +2

Query: 272 KLFVLNLPWSLTVPDIKTLFGEYGIVDDVEIIKTKDGKSRGFAFVTMSTGEEAQAAIDKL 451
           KL+V NL W +    ++  F  +  V    I  T  G+S G+ FV+ +T EEA AAI  L
Sbjct: 185 KLYVSNLAWKVRSSHLREFFSAFNPVAARVIFGTPSGQSAGYGFVSFATKEEADAAISTL 244

Query: 452 DAYELSGRIIRVEFAKR 502
           +  EL  R +R++F++R
Sbjct: 245 NGKELMDRPLRLKFSER 261


>ref|XP_006410699.1| hypothetical protein EUTSA_v10016986mg [Eutrema salsugineum]
           gi|557111868|gb|ESQ52152.1| hypothetical protein
           EUTSA_v10016986mg [Eutrema salsugineum]
          Length = 306

 Score =  147 bits (371), Expect = 2e-33
 Identities = 76/110 (69%), Positives = 90/110 (81%), Gaps = 5/110 (4%)
 Frame = +2

Query: 245 KTQKGNQRRKLFVLNLPWSLTVPDIKTLFGEYGIVDDVEIIKTKDGKSRGFAFVTMSTGE 424
           +TQK NQ+RKLFV NLPWS++V DI  LFG+ G+V +VEIIK KDGK+RGFAFVTM++GE
Sbjct: 81  ETQKSNQKRKLFVFNLPWSMSVNDISELFGQCGMVYNVEIIKQKDGKNRGFAFVTMASGE 140

Query: 425 EAQAAIDKLDAYELSGRIIRVEFAKRFK----KPPGASP-PPQGETRHKL 559
           +AQAAIDKLD +++SGRIIRV FAKRFK    KPP A P    GETRHKL
Sbjct: 141 DAQAAIDKLDTFQVSGRIIRVNFAKRFKKPTPKPPNALPYASPGETRHKL 190



 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
 Frame = +2

Query: 257 GNQRRKLFVLNLPWSLTVPDIKTLF--GEYGIVDDVEIIKTKDGKSRGFAFVTMSTGEEA 430
           G  R KL+V NL W      ++  F   ++ +V    +     G++ G+ FV+  T EEA
Sbjct: 184 GETRHKLYVSNLAWKARSTHLREFFTAADFNLVSARVVFADPQGRASGYGFVSFPTREEA 243

Query: 431 QAAIDKLDAYELSGRIIRVEFAKR 502
           +AAI KL+  EL GR I ++F+ R
Sbjct: 244 EAAIAKLNGKELMGRPISLKFSLR 267


>ref|XP_006294626.1| hypothetical protein CARUB_v10023663mg [Capsella rubella]
           gi|482563334|gb|EOA27524.1| hypothetical protein
           CARUB_v10023663mg [Capsella rubella]
          Length = 318

 Score =  147 bits (370), Expect = 2e-33
 Identities = 74/110 (67%), Positives = 90/110 (81%), Gaps = 5/110 (4%)
 Frame = +2

Query: 245 KTQKGNQRRKLFVLNLPWSLTVPDIKTLFGEYGIVDDVEIIKTKDGKSRGFAFVTMSTGE 424
           +TQK N +RKLFV NLPWS++V DI  LF + G V++VEII+ KDGK+RGFAFVTM++GE
Sbjct: 86  ETQKSNLKRKLFVFNLPWSMSVHDISDLFRQCGTVNNVEIIRQKDGKNRGFAFVTMASGE 145

Query: 425 EAQAAIDKLDAYELSGRIIRVEFAKRFK----KPPGASP-PPQGETRHKL 559
           EAQAA+DK DA+E+SGRIIRV FA+RFK    KPP A P PP G+TRHKL
Sbjct: 146 EAQAAVDKFDAFEVSGRIIRVNFARRFKKPTPKPPNALPSPPPGDTRHKL 195



 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
 Frame = +2

Query: 257 GNQRRKLFVLNLPWSLTVPDIKTLF--GEYGIVDDVEIIKTKDGKSRGFAFVTMSTGEEA 430
           G+ R KL+V NL W      ++ LF   ++  V    +    +G+S G+ FV+ +T EEA
Sbjct: 189 GDTRHKLYVSNLAWKARSTHLRELFTAADFNPVSARVVFADPEGRSSGYGFVSFATREEA 248

Query: 431 QAAIDKLDAYELSGRIIRVEFA 496
           + AI KLD  E+ GR I ++F+
Sbjct: 249 ENAITKLDGKEIMGRPIILKFS 270


>ref|XP_002326529.1| predicted protein [Populus trichocarpa]
           gi|566146773|ref|XP_006368391.1| 33 kDa
           ribonucleoprotein [Populus trichocarpa]
           gi|550346304|gb|ERP64960.1| 33 kDa ribonucleoprotein
           [Populus trichocarpa]
          Length = 294

 Score =  145 bits (365), Expect = 9e-33
 Identities = 92/178 (51%), Positives = 110/178 (61%), Gaps = 11/178 (6%)
 Frame = +2

Query: 59  KFPLLPNSSP-SIKLHNSTNVPNLSLKSIIYPFL----PSRKQQWSQLYCSXXXXXXXXX 223
           +F L P S P S+ LH S   P +S  +   P L    P  K    QL CS         
Sbjct: 23  RFFLSPKSPPLSLNLHISNPTPLIS-HNFPQPSLTQNHPRSKSLCFQL-CSTVQEVTVEI 80

Query: 224 XXXXXXXKTQKGNQRRKLFVLNLPWSLTVPDIKTLFGEYGIVDDVEIIKTKDGKSRGFAF 403
                  + Q+ N +RKLFV+NLPWS +V DIK LFG+ G V DVEIIK K+G+SRGFAF
Sbjct: 81  TPEEE--EIQEANLKRKLFVVNLPWSFSVVDIKDLFGQCGTVSDVEIIKQKNGRSRGFAF 138

Query: 404 VTMSTGEEAQAAIDKLDAYELSGRIIRVEFAKRFKKPPGASPP------PQGETRHKL 559
           VTM+TGEEAQAAIDK ++ E+SGRIIRVEFAKR ++PP    P      P GETRHKL
Sbjct: 139 VTMTTGEEAQAAIDKFNSLEVSGRIIRVEFAKRLRRPPSPRLPGTPADIPAGETRHKL 196


>gb|ABK96729.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 294

 Score =  145 bits (365), Expect = 9e-33
 Identities = 92/178 (51%), Positives = 110/178 (61%), Gaps = 11/178 (6%)
 Frame = +2

Query: 59  KFPLLPNSSP-SIKLHNSTNVPNLSLKSIIYPFL----PSRKQQWSQLYCSXXXXXXXXX 223
           +F L P S P S+ LH S   P +S  +   P L    P  K    QL CS         
Sbjct: 23  RFFLSPKSPPLSLNLHISNPTPLIS-HNFPQPSLTQNHPRSKSLCFQL-CSTVQEVTMEI 80

Query: 224 XXXXXXXKTQKGNQRRKLFVLNLPWSLTVPDIKTLFGEYGIVDDVEIIKTKDGKSRGFAF 403
                  + Q+ N +RKLFV+NLPWS +V DIK LFG+ G V DVEIIK K+G+SRGFAF
Sbjct: 81  TPEEE--EIQEANLKRKLFVVNLPWSFSVVDIKDLFGQCGTVSDVEIIKQKNGRSRGFAF 138

Query: 404 VTMSTGEEAQAAIDKLDAYELSGRIIRVEFAKRFKKPPGASPP------PQGETRHKL 559
           VTM+TGEEAQAAIDK ++ E+SGRIIRVEFAKR ++PP    P      P GETRHKL
Sbjct: 139 VTMTTGEEAQAAIDKFNSLEVSGRIIRVEFAKRLRRPPSPRLPGTPADIPAGETRHKL 196


>gb|EMJ10617.1| hypothetical protein PRUPE_ppa009362mg [Prunus persica]
          Length = 295

 Score =  144 bits (363), Expect = 1e-32
 Identities = 86/174 (49%), Positives = 111/174 (63%), Gaps = 7/174 (4%)
 Frame = +2

Query: 59  KFPLLPNSSPSIKLHNSTNVPNLSLKSIIY---PFL---PSRKQQWSQLYCSXXXXXXXX 220
           KF   P  S S+KLH S ++P +S ++ +Y   P +   P+RK  +  +  +        
Sbjct: 24  KFFASPKPSTSLKLHISNSIPPIS-RNFLYSSPPCILNNPTRKPFFELMCSAVQEVTAEE 82

Query: 221 XXXXXXXXKTQKGNQRRKLFVLNLPWSLTVPDIKTLFGEYGIVDDVEIIKTKDGKSRGFA 400
                   +TQ  N +RKL+V+NLPWSLTV DIK LFGE G V DVEIIK  +GKSRGFA
Sbjct: 83  EAVEEKAEETQTQNLKRKLYVVNLPWSLTVVDIKNLFGECGTVTDVEIIKQPNGKSRGFA 142

Query: 401 FVTMSTGEEAQAAIDKLDAYELSGRIIRVEFAKRFKKPPGASPPPQ-GETRHKL 559
           FVTM++GEEAQA I+K  ++E+  R IRVEFAK+FKKP    P PQ  ETR+KL
Sbjct: 143 FVTMASGEEAQAVIEKFHSHEVLDRTIRVEFAKQFKKPSPPPPNPQIVETRYKL 196


>ref|XP_002879549.1| hypothetical protein ARALYDRAFT_482506 [Arabidopsis lyrata subsp.
           lyrata] gi|297325388|gb|EFH55808.1| hypothetical protein
           ARALYDRAFT_482506 [Arabidopsis lyrata subsp. lyrata]
          Length = 308

 Score =  142 bits (358), Expect = 6e-32
 Identities = 71/110 (64%), Positives = 86/110 (78%), Gaps = 5/110 (4%)
 Frame = +2

Query: 245 KTQKGNQRRKLFVLNLPWSLTVPDIKTLFGEYGIVDDVEIIKTKDGKSRGFAFVTMSTGE 424
           +TQK N +RKLFV NLPWS++V DI  LFG+ G V++VEII+ KDGK+RGFAFVTM++GE
Sbjct: 87  ETQKSNLKRKLFVFNLPWSMSVNDISELFGQCGTVNNVEIIRQKDGKNRGFAFVTMASGE 146

Query: 425 EAQAAIDKLDAYELSGRIIRVEFAKRFKKPPGASP-----PPQGETRHKL 559
           EAQAAIDK D  ++SGRII V FA+RFKKP    P     PP G+TRHKL
Sbjct: 147 EAQAAIDKFDTSQVSGRIISVNFARRFKKPTPKPPNDLPSPPPGDTRHKL 196



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
 Frame = +2

Query: 257 GNQRRKLFVLNLPWSLTVPDIKTLF--GEYGIVDDVEIIKTKDGKSRGFAFVTMSTGEEA 430
           G+ R KL+V NL W      ++ LF   ++  V    +    +G+S G+ FV+ +T EEA
Sbjct: 190 GDTRHKLYVSNLAWKARSTHLRELFTASDFNPVSARVVFADPEGRSSGYGFVSFATREEA 249

Query: 431 QAAIDKLDAYELSGRIIRVEFAKRFKKPPGASPPPQGET 547
           + AI KLD  E+ GR I ++F+ R      AS    G+T
Sbjct: 250 EDAIAKLDGKEIMGRPIILKFSLR-----SASESEDGDT 283


>ref|NP_001242808.1| uncharacterized protein LOC100793319 [Glycine max]
           gi|255639879|gb|ACU20232.1| unknown [Glycine max]
          Length = 289

 Score =  141 bits (356), Expect = 9e-32
 Identities = 70/105 (66%), Positives = 83/105 (79%), Gaps = 3/105 (2%)
 Frame = +2

Query: 248 TQKGNQRRKLFVLNLPWSLTVPDIKTLFGEYGIVDDVEIIKTKDGKSRGFAFVTMSTGEE 427
           TQ  +  +KL+V+NL WSLT  DI  LF + G V DVEIIK+KDG+S+G+AFVTM++GEE
Sbjct: 73  TQPTDNVKKLYVVNLSWSLTAADINDLFAQSGTVTDVEIIKSKDGRSKGYAFVTMASGEE 132

Query: 428 AQAAIDKLDAYELSGRIIRVEFAKRFKKPPGASPPP---QGETRH 553
           AQAA+DK D+YELSGRIIRVE AKRFKKPP   PPP    GETRH
Sbjct: 133 AQAAVDKFDSYELSGRIIRVELAKRFKKPPSPPPPPGPRPGETRH 177


>ref|XP_002527668.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
           gi|223532973|gb|EEF34739.1| ribonucleoprotein,
           chloroplast, putative [Ricinus communis]
          Length = 278

 Score =  141 bits (356), Expect = 9e-32
 Identities = 73/109 (66%), Positives = 89/109 (81%), Gaps = 4/109 (3%)
 Frame = +2

Query: 245 KTQKGNQRRKLFVLNLPWSLTVPDIKTLFGEYGIVDDVEIIKTKDGKSRGFAFVTMSTGE 424
           +TQ+  Q+RKL+V NLPWSL+V DIK LFG+ G V DVEIIK K+G+SRGFAFVT+++GE
Sbjct: 75  ETQETTQKRKLYVFNLPWSLSVVDIKNLFGQCGTVTDVEIIKQKNGRSRGFAFVTLASGE 134

Query: 425 EAQAAIDKLDAYELSGRIIRVEFAKRFKKPPGASPPPQG----ETRHKL 559
           EAQAAIDKLD++E+SGRIIRVEFAKR K P  + P P G    ETRHK+
Sbjct: 135 EAQAAIDKLDSHEVSGRIIRVEFAKRLKPP--SPPSPTGTSARETRHKI 181



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
 Frame = +2

Query: 248 TQKGNQRRKLFVLNLPWSLTVPDIKTLFG-EYGIVDDVEIIKTKDGKSRGFAFVTMSTGE 424
           T     R K++V NL W +    ++  F   +  V    +  +  G+S G+ FV+ +T E
Sbjct: 172 TSARETRHKIYVSNLAWKVRSTHLREFFSTNFSPVSSRVVFDSPTGRSSGYGFVSFATRE 231

Query: 425 EAQAAIDKLDAYELSGRIIRVEFAKR 502
           EA+AAI  LD  EL GR +R++F+ R
Sbjct: 232 EAEAAISALDGKELMGRPLRLKFSDR 257


>ref|NP_181084.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
           thaliana] gi|3608147|gb|AAC36180.1| putative chloroplast
           RNA binding protein precursor [Arabidopsis thaliana]
           gi|14596023|gb|AAK68739.1| putative chloroplast RNA
           binding protein precursor [Arabidopsis thaliana]
           gi|23198314|gb|AAN15684.1| putative chloroplast RNA
           binding protein precursor [Arabidopsis thaliana]
           gi|330254012|gb|AEC09106.1| RNA-binding (RRM/RBD/RNP
           motifs) family protein [Arabidopsis thaliana]
          Length = 308

 Score =  141 bits (355), Expect = 1e-31
 Identities = 70/110 (63%), Positives = 86/110 (78%), Gaps = 5/110 (4%)
 Frame = +2

Query: 245 KTQKGNQRRKLFVLNLPWSLTVPDIKTLFGEYGIVDDVEIIKTKDGKSRGFAFVTMSTGE 424
           +TQ  N +RKLFV NLPWS++V DI  LFG+ G V++VEII+ KDGK+RGFAFVTM++GE
Sbjct: 87  ETQNSNLKRKLFVFNLPWSMSVNDISELFGQCGTVNNVEIIRQKDGKNRGFAFVTMASGE 146

Query: 425 EAQAAIDKLDAYELSGRIIRVEFAKRFKKPPGASP-----PPQGETRHKL 559
           EAQAAIDK D +++SGRII V FA+RFKKP   SP     P  G+TRHKL
Sbjct: 147 EAQAAIDKFDTFQVSGRIISVSFARRFKKPTPKSPNDLPSPAPGDTRHKL 196



 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
 Frame = +2

Query: 257 GNQRRKLFVLNLPWSLTVPDIKTLF--GEYGIVDDVEIIKTKDGKSRGFAFVTMSTGEEA 430
           G+ R KL+V NL W      ++ LF   ++  V    +    +G+S G+ FV+ +T EEA
Sbjct: 190 GDTRHKLYVSNLAWKARSTHLRELFTAADFNPVSARVVFADPEGRSSGYGFVSFATREEA 249

Query: 431 QAAIDKLDAYELSGRIIRVEFAKR 502
           + AI KL+  E+ GR I ++F+ R
Sbjct: 250 ENAITKLNGKEIMGRPITLKFSLR 273


>ref|XP_004301780.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Fragaria
           vesca subsp. vesca]
          Length = 299

 Score =  140 bits (354), Expect = 2e-31
 Identities = 81/143 (56%), Positives = 98/143 (68%), Gaps = 6/143 (4%)
 Frame = +2

Query: 149 PFLPSRKQQWSQLYCSXXXXXXXXXXXXXXXX----KTQKG-NQRRKLFVLNLPWSLTVP 313
           P +P+RK  + +L CS                    KTQK  N +RKL+V+NLPWSLTV 
Sbjct: 49  PLIPARKLSF-ELLCSAVQEITTQEEEQAEQESAEEKTQKQQNLKRKLYVVNLPWSLTVA 107

Query: 314 DIKTLFGEYGIVDDVEIIKTKDGKSRGFAFVTMSTGEEAQAAIDKLDAYELSGRIIRVEF 493
           DIKTLFG+ G V DVEIIK  DG++RGFAFVTM++GEEAQA IDK D+ ELSGR ++VEF
Sbjct: 108 DIKTLFGQCGHVKDVEIIKQMDGRNRGFAFVTMASGEEAQAVIDKFDSQELSGRTVKVEF 167

Query: 494 AKRFKKP-PGASPPPQGETRHKL 559
           AK+FKKP P  S P   ETR+KL
Sbjct: 168 AKQFKKPTPRPSTPKVQETRYKL 190


>ref|XP_004164674.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus]
          Length = 288

 Score =  139 bits (350), Expect = 5e-31
 Identities = 87/168 (51%), Positives = 105/168 (62%), Gaps = 7/168 (4%)
 Frame = +2

Query: 77  NSSPS-IKLHNSTNVPNLSLKSI--IYP--FLPSRKQQWSQLYCSXXXXXXXXXXXXXXX 241
           N  PS IKL  S + P LSL     I P  F  SR +      CS               
Sbjct: 29  NKLPSPIKLRISFSSPLLSLNPTTPISPTSFNSSRNRGGGARLCSALQEVTLEEASE--- 85

Query: 242 XKTQKGNQRRKLFVLNLPWSLTVPDIKTLFGEYGIVDDVEIIKTKDGKSRGFAFVTMSTG 421
            + Q  NQ+RKL++ NLPWSL+V DIK LFG+ G V DVEIIK K+G+SRGFAFVTM++ 
Sbjct: 86  -ENQDVNQKRKLYIFNLPWSLSVVDIKELFGQCGTVSDVEIIKQKNGRSRGFAFVTMASP 144

Query: 422 EEAQAAIDKLDAYELSGRIIRVEFAKRFKKPPGASP--PPQGETRHKL 559
           +EAQAAI K D+ E+SGR+I+VEFAKR KKPP   P  PP GET +KL
Sbjct: 145 DEAQAAIQKFDSQEISGRVIKVEFAKRLKKPPPPKPPGPPPGETVNKL 192


>ref|XP_004148763.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic-like [Cucumis
           sativus]
          Length = 282

 Score =  139 bits (350), Expect = 5e-31
 Identities = 87/168 (51%), Positives = 105/168 (62%), Gaps = 7/168 (4%)
 Frame = +2

Query: 77  NSSPS-IKLHNSTNVPNLSLKSI--IYP--FLPSRKQQWSQLYCSXXXXXXXXXXXXXXX 241
           N  PS IKL  S + P LSL     I P  F  SR +      CS               
Sbjct: 23  NKLPSPIKLRISFSSPLLSLNPTTPISPTSFNSSRNRGGGARLCSALQEVTLEEASE--- 79

Query: 242 XKTQKGNQRRKLFVLNLPWSLTVPDIKTLFGEYGIVDDVEIIKTKDGKSRGFAFVTMSTG 421
            + Q  NQ+RKL++ NLPWSL+V DIK LFG+ G V DVEIIK K+G+SRGFAFVTM++ 
Sbjct: 80  -ENQDVNQKRKLYIFNLPWSLSVVDIKELFGQCGTVSDVEIIKQKNGRSRGFAFVTMASP 138

Query: 422 EEAQAAIDKLDAYELSGRIIRVEFAKRFKKPPGASP--PPQGETRHKL 559
           +EAQAAI K D+ E+SGR+I+VEFAKR KKPP   P  PP GET +KL
Sbjct: 139 DEAQAAIQKFDSQEISGRVIKVEFAKRLKKPPPPKPPGPPPGETVNKL 186


>gb|EXB32996.1| 31 kDa ribonucleoprotein [Morus notabilis]
          Length = 295

 Score =  137 bits (346), Expect = 1e-30
 Identities = 69/105 (65%), Positives = 86/105 (81%), Gaps = 2/105 (1%)
 Frame = +2

Query: 251 QKGNQRRKLFVLNLPWSLTVPDIKTLFGEYGIVDDVEIIKTKDGKSRGFAFVTMSTGEEA 430
           ++ NQ+RKL+V+NLPWSLTV DIK+LFG+ G V DVEIIK KDG++RGFAFVTM+ GEEA
Sbjct: 88  KENNQKRKLYVVNLPWSLTVVDIKSLFGQCGTVTDVEIIKQKDGRNRGFAFVTMACGEEA 147

Query: 431 QAAIDKLDAYELSGRIIRVEFAKRFKKPPGASPP-PQ-GETRHKL 559
           QA ID+ +  ++SGRII++E AK+FKKP    PP PQ GET HKL
Sbjct: 148 QAVIDRFNLQDVSGRIIKIELAKQFKKPSPPRPPGPQPGETTHKL 192


>ref|XP_003534278.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Glycine
           max]
          Length = 282

 Score =  137 bits (344), Expect = 2e-30
 Identities = 67/98 (68%), Positives = 79/98 (80%), Gaps = 3/98 (3%)
 Frame = +2

Query: 269 RKLFVLNLPWSLTVPDIKTLFGEYGIVDDVEIIKTKDGKSRGFAFVTMSTGEEAQAAIDK 448
           +KL+V+NL WSLT  DI  LF + G V DVEIIK+KDG+S+G+AFVTM++GEEAQAA+DK
Sbjct: 73  KKLYVVNLSWSLTAADITDLFAQCGTVTDVEIIKSKDGRSKGYAFVTMASGEEAQAAVDK 132

Query: 449 LDAYELSGRIIRVEFAKRFKKPPGASPPP---QGETRH 553
            D+YELSGRIIRVE AKR KKPP   PPP    GETRH
Sbjct: 133 FDSYELSGRIIRVELAKRLKKPPSLPPPPGPRPGETRH 170