BLASTX nr result
ID: Atropa21_contig00003115
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00003115
(625 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004250878.1| PREDICTED: signal recognition particle 72 kD... 124 2e-26
ref|XP_006340082.1| PREDICTED: uncharacterized protein LOC102594... 124 2e-26
ref|XP_006340083.1| PREDICTED: signal recognition particle subun... 121 1e-25
gb|EXB82414.1| Signal recognition particle 72 kDa protein [Morus... 93 5e-17
gb|EMJ26348.1| hypothetical protein PRUPE_ppa002478mg [Prunus pe... 93 7e-17
gb|EMJ26347.1| hypothetical protein PRUPE_ppa002478mg [Prunus pe... 93 7e-17
gb|EOY00810.1| SRP72 RNA-binding domain isoform 2 [Theobroma cacao] 91 2e-16
gb|EOY00809.1| SRP72 RNA-binding domain isoform 1 [Theobroma cacao] 91 2e-16
ref|XP_004310033.1| PREDICTED: signal recognition particle 72 kD... 91 2e-16
ref|XP_002271378.1| PREDICTED: signal recognition particle 72 kD... 91 3e-16
ref|XP_006484027.1| PREDICTED: signal recognition particle subun... 88 2e-15
ref|XP_006438127.1| hypothetical protein CICLE_v100309552mg, par... 88 2e-15
ref|XP_004504485.1| PREDICTED: signal recognition particle 72 kD... 88 2e-15
ref|XP_003524881.1| PREDICTED: signal recognition particle subun... 87 4e-15
ref|XP_003531178.1| PREDICTED: signal recognition particle subun... 86 8e-15
ref|XP_006300835.1| hypothetical protein CARUB_v10019924mg [Caps... 86 1e-14
gb|EPS72346.1| hypothetical protein M569_02406 [Genlisea aurea] 85 1e-14
ref|XP_004135297.1| PREDICTED: signal recognition particle 72 kD... 85 1e-14
ref|NP_176936.1| SRP72 RNA-binding domain-containing protein [Ar... 85 1e-14
ref|XP_002888616.1| hypothetical protein ARALYDRAFT_475871 [Arab... 84 2e-14
>ref|XP_004250878.1| PREDICTED: signal recognition particle 72 kDa protein-like [Solanum
lycopersicum]
Length = 664
Score = 124 bits (311), Expect = 2e-26
Identities = 59/63 (93%), Positives = 62/63 (98%)
Frame = -3
Query: 623 PDPERWLPKRERSSYRPKRKDKRAAQIRGSQGAVAKEAASSSDTKSNQPANPKGASQNAG 444
PDPERWLPKRERSSYRPKRKDKRAAQ+RGSQGAVAKEAAS+SD KSNQPANPKGASQ+AG
Sbjct: 588 PDPERWLPKRERSSYRPKRKDKRAAQVRGSQGAVAKEAASNSDAKSNQPANPKGASQHAG 647
Query: 443 NVQ 435
NVQ
Sbjct: 648 NVQ 650
>ref|XP_006340082.1| PREDICTED: uncharacterized protein LOC102594494 [Solanum tuberosum]
Length = 407
Score = 124 bits (311), Expect = 2e-26
Identities = 61/71 (85%), Positives = 67/71 (94%)
Frame = -1
Query: 625 HLIQRGGFPRGRGLVTDQRERIREQLKLEVLRVQWLKRRRAVVIRNQTSQLIQKEPLRMQ 446
H IQRGGFPRGRGLVTDQRERIREQLKLEVL+VQWLKR+RA+ IR+QT+QLIQKEPLRMQ
Sbjct: 244 HPIQRGGFPRGRGLVTDQRERIREQLKLEVLKVQWLKRQRAIAIRSQTNQLIQKEPLRMQ 303
Query: 445 AMCNQRLHPNL 413
CN+RLHPNL
Sbjct: 304 --CNRRLHPNL 312
>ref|XP_006340083.1| PREDICTED: signal recognition particle subunit SRP72-like [Solanum
tuberosum]
Length = 592
Score = 121 bits (304), Expect = 1e-25
Identities = 59/59 (100%), Positives = 59/59 (100%)
Frame = -3
Query: 623 PDPERWLPKRERSSYRPKRKDKRAAQIRGSQGAVAKEAASSSDTKSNQPANPKGASQNA 447
PDPERWLPKRERSSYRPKRKDKRAAQIRGSQGAVAKEAASSSDTKSNQPANPKGASQNA
Sbjct: 518 PDPERWLPKRERSSYRPKRKDKRAAQIRGSQGAVAKEAASSSDTKSNQPANPKGASQNA 576
>gb|EXB82414.1| Signal recognition particle 72 kDa protein [Morus notabilis]
Length = 671
Score = 93.2 bits (230), Expect = 5e-17
Identities = 46/72 (63%), Positives = 56/72 (77%), Gaps = 9/72 (12%)
Frame = -3
Query: 623 PDPERWLPKRERSSYRPKRKDKRAAQIRGSQGAVAKE---------AASSSDTKSNQPAN 471
PDPERWLPKRERSSYRPKRKDKRAAQ+RGSQGAV +E ++S++++KSNQ
Sbjct: 587 PDPERWLPKRERSSYRPKRKDKRAAQVRGSQGAVVREKHEAGPAGASSSAANSKSNQATT 646
Query: 470 PKGASQNAGNVQ 435
KGASQN+ + Q
Sbjct: 647 SKGASQNSSSEQ 658
>gb|EMJ26348.1| hypothetical protein PRUPE_ppa002478mg [Prunus persica]
Length = 668
Score = 92.8 bits (229), Expect = 7e-17
Identities = 45/65 (69%), Positives = 54/65 (83%), Gaps = 6/65 (9%)
Frame = -3
Query: 623 PDPERWLPKRERSSYRPKRKDKRAAQIRGSQGAVAKE------AASSSDTKSNQPANPKG 462
PDPERWLPKRERSSYRPKRKDKRAAQ+RGSQG+VA++ +++S++KSNQ KG
Sbjct: 586 PDPERWLPKRERSSYRPKRKDKRAAQVRGSQGSVARDKHEAGATSNTSNSKSNQTTTSKG 645
Query: 461 ASQNA 447
ASQNA
Sbjct: 646 ASQNA 650
>gb|EMJ26347.1| hypothetical protein PRUPE_ppa002478mg [Prunus persica]
Length = 594
Score = 92.8 bits (229), Expect = 7e-17
Identities = 45/65 (69%), Positives = 54/65 (83%), Gaps = 6/65 (9%)
Frame = -3
Query: 623 PDPERWLPKRERSSYRPKRKDKRAAQIRGSQGAVAKE------AASSSDTKSNQPANPKG 462
PDPERWLPKRERSSYRPKRKDKRAAQ+RGSQG+VA++ +++S++KSNQ KG
Sbjct: 512 PDPERWLPKRERSSYRPKRKDKRAAQVRGSQGSVARDKHEAGATSNTSNSKSNQTTTSKG 571
Query: 461 ASQNA 447
ASQNA
Sbjct: 572 ASQNA 576
>gb|EOY00810.1| SRP72 RNA-binding domain isoform 2 [Theobroma cacao]
Length = 667
Score = 91.3 bits (225), Expect = 2e-16
Identities = 46/68 (67%), Positives = 52/68 (76%), Gaps = 9/68 (13%)
Frame = -3
Query: 623 PDPERWLPKRERSSYRPKRKDKRAAQIRGSQGAVAKEA---------ASSSDTKSNQPAN 471
PDPERWLPKRERSSYRPKRKDKRAAQ+RGSQGAV +E ++SS+ KSNQ +
Sbjct: 584 PDPERWLPKRERSSYRPKRKDKRAAQVRGSQGAVVREKSEASASATNSNSSNLKSNQATS 643
Query: 470 PKGASQNA 447
KG SQNA
Sbjct: 644 SKGVSQNA 651
>gb|EOY00809.1| SRP72 RNA-binding domain isoform 1 [Theobroma cacao]
Length = 670
Score = 91.3 bits (225), Expect = 2e-16
Identities = 46/68 (67%), Positives = 52/68 (76%), Gaps = 9/68 (13%)
Frame = -3
Query: 623 PDPERWLPKRERSSYRPKRKDKRAAQIRGSQGAVAKEA---------ASSSDTKSNQPAN 471
PDPERWLPKRERSSYRPKRKDKRAAQ+RGSQGAV +E ++SS+ KSNQ +
Sbjct: 587 PDPERWLPKRERSSYRPKRKDKRAAQVRGSQGAVVREKSEASASATNSNSSNLKSNQATS 646
Query: 470 PKGASQNA 447
KG SQNA
Sbjct: 647 SKGVSQNA 654
>ref|XP_004310033.1| PREDICTED: signal recognition particle 72 kDa protein-like
[Fragaria vesca subsp. vesca]
Length = 661
Score = 91.3 bits (225), Expect = 2e-16
Identities = 47/64 (73%), Positives = 54/64 (84%), Gaps = 5/64 (7%)
Frame = -3
Query: 623 PDPERWLPKRERSSYRPKRKDKR-AAQIRGSQGAVAKE----AASSSDTKSNQPANPKGA 459
PDPERWLPKRERSSYRPKRKDKR AAQ+RGSQG+VA++ A+SS+ KSNQ A KGA
Sbjct: 581 PDPERWLPKRERSSYRPKRKDKRAAAQVRGSQGSVARDKHEAGATSSNAKSNQAATSKGA 640
Query: 458 SQNA 447
SQN+
Sbjct: 641 SQNS 644
>ref|XP_002271378.1| PREDICTED: signal recognition particle 72 kDa protein [Vitis
vinifera]
Length = 673
Score = 90.9 bits (224), Expect = 3e-16
Identities = 45/68 (66%), Positives = 54/68 (79%), Gaps = 9/68 (13%)
Frame = -3
Query: 623 PDPERWLPKRERSSYRPKRKDKRAAQIRGSQGAVAKE---------AASSSDTKSNQPAN 471
PDPERWLPKRERSSYRPKRKDKRAAQ+RGSQGAV +E +A++S++KS+Q
Sbjct: 588 PDPERWLPKRERSSYRPKRKDKRAAQVRGSQGAVVREKHEAAGSDTSANTSNSKSDQATT 647
Query: 470 PKGASQNA 447
KG+SQNA
Sbjct: 648 SKGSSQNA 655
>ref|XP_006484027.1| PREDICTED: signal recognition particle subunit SRP72-like [Citrus
sinensis]
Length = 666
Score = 88.2 bits (217), Expect = 2e-15
Identities = 43/64 (67%), Positives = 52/64 (81%), Gaps = 6/64 (9%)
Frame = -3
Query: 623 PDPERWLPKRERSSYRPKRKDKRAAQIRGSQGAVAKE------AASSSDTKSNQPANPKG 462
PDPERWLPKRERSSYRP+RKDKRAAQ+RGSQGAV +E A +SS++ S+Q + KG
Sbjct: 585 PDPERWLPKRERSSYRPRRKDKRAAQVRGSQGAVVREKHDAGAAGASSNSTSSQATSSKG 644
Query: 461 ASQN 450
A+QN
Sbjct: 645 AAQN 648
>ref|XP_006438127.1| hypothetical protein CICLE_v100309552mg, partial [Citrus
clementina] gi|557540323|gb|ESR51367.1| hypothetical
protein CICLE_v100309552mg, partial [Citrus clementina]
Length = 208
Score = 88.2 bits (217), Expect = 2e-15
Identities = 43/64 (67%), Positives = 52/64 (81%), Gaps = 6/64 (9%)
Frame = -3
Query: 623 PDPERWLPKRERSSYRPKRKDKRAAQIRGSQGAVAKE------AASSSDTKSNQPANPKG 462
PDPERWLPKRERSSYRP+RKDKRAAQ+RGSQGAV +E A +SS++ S+Q + KG
Sbjct: 127 PDPERWLPKRERSSYRPRRKDKRAAQVRGSQGAVVREKHDAGAAGASSNSTSSQATSSKG 186
Query: 461 ASQN 450
A+QN
Sbjct: 187 AAQN 190
>ref|XP_004504485.1| PREDICTED: signal recognition particle 72 kDa protein-like [Cicer
arietinum]
Length = 664
Score = 88.2 bits (217), Expect = 2e-15
Identities = 44/69 (63%), Positives = 54/69 (78%), Gaps = 6/69 (8%)
Frame = -3
Query: 623 PDPERWLPKRERSSYRPKRKDKRAAQIRGSQGAVAKE------AASSSDTKSNQPANPKG 462
PDPERWLPKRERS++RPKRKDKRAAQ+RGSQGAV +E ++S S+ KSNQ KG
Sbjct: 583 PDPERWLPKRERSTFRPKRKDKRAAQVRGSQGAVVREKQDAGSSSSHSNPKSNQATTSKG 642
Query: 461 ASQNAGNVQ 435
A+Q+A + Q
Sbjct: 643 ATQSAVSEQ 651
>ref|XP_003524881.1| PREDICTED: signal recognition particle subunit SRP72-like [Glycine
max]
Length = 662
Score = 87.0 bits (214), Expect = 4e-15
Identities = 45/69 (65%), Positives = 55/69 (79%), Gaps = 6/69 (8%)
Frame = -3
Query: 623 PDPERWLPKRERSSYRPKRKDKRAAQIRGSQGAVAKE------AASSSDTKSNQPANPKG 462
PDPERWLPKRERS+YRPKRKDKRAAQ+RGSQGAV ++ +++SS+ KSNQ KG
Sbjct: 582 PDPERWLPKRERSTYRPKRKDKRAAQVRGSQGAVVRDKHDTGASSNSSNLKSNQ-GTSKG 640
Query: 461 ASQNAGNVQ 435
A+QNA + Q
Sbjct: 641 AAQNAVSEQ 649
>ref|XP_003531178.1| PREDICTED: signal recognition particle subunit SRP72-like [Glycine
max]
Length = 662
Score = 85.9 bits (211), Expect = 8e-15
Identities = 44/69 (63%), Positives = 55/69 (79%), Gaps = 6/69 (8%)
Frame = -3
Query: 623 PDPERWLPKRERSSYRPKRKDKRAAQIRGSQGAVAKE------AASSSDTKSNQPANPKG 462
PDPERWLPKRERS+YRPKRKDKRAAQ+RGSQGAV ++ ++++S+ KSNQ KG
Sbjct: 582 PDPERWLPKRERSTYRPKRKDKRAAQVRGSQGAVVRDKHDTGASSNNSNPKSNQ-GTSKG 640
Query: 461 ASQNAGNVQ 435
A+QNA + Q
Sbjct: 641 AAQNAVSEQ 649
>ref|XP_006300835.1| hypothetical protein CARUB_v10019924mg [Capsella rubella]
gi|482569545|gb|EOA33733.1| hypothetical protein
CARUB_v10019924mg [Capsella rubella]
Length = 656
Score = 85.5 bits (210), Expect = 1e-14
Identities = 43/55 (78%), Positives = 48/55 (87%), Gaps = 2/55 (3%)
Frame = -3
Query: 623 PDPERWLPKRERSSYRPKRKDKRAAQIRGSQGAVA--KEAASSSDTKSNQPANPK 465
PDPERWLP+RERSSYRPKRKDKRAAQIRGSQGAVA K+ A+ S +KSNQ A+ K
Sbjct: 584 PDPERWLPRRERSSYRPKRKDKRAAQIRGSQGAVAKDKQEAAPSTSKSNQGASSK 638
>gb|EPS72346.1| hypothetical protein M569_02406 [Genlisea aurea]
Length = 658
Score = 85.1 bits (209), Expect = 1e-14
Identities = 44/59 (74%), Positives = 46/59 (77%)
Frame = -3
Query: 623 PDPERWLPKRERSSYRPKRKDKRAAQIRGSQGAVAKEAASSSDTKSNQPANPKGASQNA 447
PDPERWLPKRERS+YRPKRKDKRAAQ+RGSQGAVAKEA NQ AN K SQ A
Sbjct: 592 PDPERWLPKRERSTYRPKRKDKRAAQVRGSQGAVAKEA--------NQTANSKTTSQAA 642
>ref|XP_004135297.1| PREDICTED: signal recognition particle 72 kDa protein-like [Cucumis
sativus] gi|449530207|ref|XP_004172087.1| PREDICTED:
signal recognition particle 72 kDa protein-like [Cucumis
sativus]
Length = 667
Score = 85.1 bits (209), Expect = 1e-14
Identities = 40/67 (59%), Positives = 53/67 (79%), Gaps = 9/67 (13%)
Frame = -3
Query: 623 PDPERWLPKRERSSYRPKRKDKRAAQIRGSQGAVAKE---------AASSSDTKSNQPAN 471
PDPERWLP+RERSSYRPKRKDKRAAQ+RGSQGA+ +E +++++++KSNQ +
Sbjct: 584 PDPERWLPRRERSSYRPKRKDKRAAQVRGSQGAMVREKHETSVSGGSSNNANSKSNQAMS 643
Query: 470 PKGASQN 450
KG +QN
Sbjct: 644 SKGTNQN 650
>ref|NP_176936.1| SRP72 RNA-binding domain-containing protein [Arabidopsis thaliana]
gi|11072013|gb|AAG28892.1|AC008113_8 F12A21.17
[Arabidopsis thaliana] gi|28392947|gb|AAO41909.1|
unknown protein [Arabidopsis thaliana]
gi|28827690|gb|AAO50689.1| unknown protein [Arabidopsis
thaliana] gi|332196560|gb|AEE34681.1| SRP72 RNA-binding
domain-containing protein [Arabidopsis thaliana]
Length = 664
Score = 85.1 bits (209), Expect = 1e-14
Identities = 42/56 (75%), Positives = 48/56 (85%), Gaps = 2/56 (3%)
Frame = -3
Query: 623 PDPERWLPKRERSSYRPKRKDKRAAQIRGSQGAVA--KEAASSSDTKSNQPANPKG 462
PDPERWLP+RERSSY+PKRKDKRAAQIRGSQGAV K+ A+ S +KSNQ A+ KG
Sbjct: 593 PDPERWLPRRERSSYKPKRKDKRAAQIRGSQGAVTKDKQEAAPSTSKSNQVASSKG 648
>ref|XP_002888616.1| hypothetical protein ARALYDRAFT_475871 [Arabidopsis lyrata subsp.
lyrata] gi|297334457|gb|EFH64875.1| hypothetical protein
ARALYDRAFT_475871 [Arabidopsis lyrata subsp. lyrata]
Length = 652
Score = 84.3 bits (207), Expect = 2e-14
Identities = 42/55 (76%), Positives = 47/55 (85%), Gaps = 2/55 (3%)
Frame = -3
Query: 623 PDPERWLPKRERSSYRPKRKDKRAAQIRGSQGAVA--KEAASSSDTKSNQPANPK 465
PDPERWLP+RERSSYRPKRKDKRAAQIRGSQGAV K+ A+ S +KSNQ A+ K
Sbjct: 581 PDPERWLPRRERSSYRPKRKDKRAAQIRGSQGAVTKDKQEAAPSTSKSNQAASSK 635