BLASTX nr result
ID: Atropa21_contig00003080
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00003080
(1394 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004232896.1| PREDICTED: 30S ribosomal protein S5, chlorop... 230 1e-57
ref|XP_006347020.1| PREDICTED: 30S ribosomal protein S5, chlorop... 224 7e-56
ref|XP_002509457.1| 30S ribosomal protein S5, putative [Ricinus ... 145 3e-32
ref|XP_002305129.1| hypothetical protein POPTR_0004s04550g [Popu... 143 2e-31
ref|XP_006387270.1| hypothetical protein POPTR_1364s00200g, part... 141 6e-31
ref|XP_004134699.1| PREDICTED: 30S ribosomal protein S5, chlorop... 141 6e-31
gb|EOY28207.1| Ribosomal protein S5 family protein [Theobroma ca... 138 5e-30
ref|XP_004294008.1| PREDICTED: 30S ribosomal protein S5, chlorop... 130 1e-27
gb|EXC18094.1| 30S ribosomal protein S5 [Morus notabilis] 130 2e-27
gb|EMJ12857.1| hypothetical protein PRUPE_ppa008978mg [Prunus pe... 130 2e-27
ref|XP_003542738.1| PREDICTED: 30S ribosomal protein S5, chlorop... 129 3e-27
emb|CBI30587.3| unnamed protein product [Vitis vinifera] 129 3e-27
ref|XP_003529335.1| PREDICTED: 30S ribosomal protein S5, chlorop... 129 4e-27
ref|XP_002274092.2| PREDICTED: 30S ribosomal protein S5, chlorop... 127 1e-26
sp|Q9ST69.1|RR5_SPIOL RecName: Full=30S ribosomal protein S5, ch... 123 2e-25
ref|XP_006377376.1| hypothetical protein POPTR_0011s05370g [Popu... 123 2e-25
ref|XP_004505073.1| PREDICTED: LOW QUALITY PROTEIN: 30S ribosoma... 122 3e-25
ref|XP_006467770.1| PREDICTED: 30S ribosomal protein S5, chlorop... 118 7e-24
ref|XP_006449367.1| hypothetical protein CICLE_v10016057mg [Citr... 118 7e-24
gb|ESW31331.1| hypothetical protein PHAVU_002G229700g [Phaseolus... 115 6e-23
>ref|XP_004232896.1| PREDICTED: 30S ribosomal protein S5, chloroplastic-like [Solanum
lycopersicum]
Length = 305
Score = 230 bits (586), Expect = 1e-57
Identities = 125/201 (62%), Positives = 132/201 (65%), Gaps = 19/201 (9%)
Frame = -2
Query: 1156 QYQPHHTFFIPKTTQKPPFYLLLNPTKLNPITPNSTPAETTYFDNTDPEEISTYDPPERP 977
Q QPHHTFFIPKT Q P F+LLLNPTK +PI PNST AETT+FDNTDPEEISTYDPPERP
Sbjct: 24 QSQPHHTFFIPKTIQSP-FHLLLNPTKFDPIKPNSTTAETTFFDNTDPEEISTYDPPERP 82
Query: 976 EDFIEPPSFDDGPMESEEDIAKA-------------------YXMDSKVKKTTGFGKAKK 854
EDFIEP SFDDGPMESEE+IAKA Y MDSKVKKTT FGK KK
Sbjct: 83 EDFIEPASFDDGPMESEEEIAKAYEELYGAAYSGETFLGNDIYAMDSKVKKTTSFGKTKK 142
Query: 853 EKSKDGFDEXXXXXXXXXXXXXXXXQMHFRAIXXXXXXXXXXXXXXXXXXXXXXXVQKSA 674
EK+KDGFDE Q+HFRA+ VQKSA
Sbjct: 143 EKAKDGFDERVVQVRRVTKVVKGGKQLHFRAVVVVGDKKGQVGVGVGKAKEVIAAVQKSA 202
Query: 673 VNARRNLITVPMTKYLTFPHR 611
VNARRNLITVPMTKYLTFPHR
Sbjct: 203 VNARRNLITVPMTKYLTFPHR 223
>ref|XP_006347020.1| PREDICTED: 30S ribosomal protein S5, chloroplastic-like [Solanum
tuberosum]
Length = 305
Score = 224 bits (571), Expect = 7e-56
Identities = 123/201 (61%), Positives = 129/201 (64%), Gaps = 19/201 (9%)
Frame = -2
Query: 1156 QYQPHHTFFIPKTTQKPPFYLLLNPTKLNPITPNSTPAETTYFDNTDPEEISTYDPPERP 977
Q Q HHTFFIPK P FYLLLNPTK +PI PNST AETT+FDNTDPEEISTYDPPERP
Sbjct: 24 QSQTHHTFFIPKPNLSP-FYLLLNPTKFDPIKPNSTTAETTFFDNTDPEEISTYDPPERP 82
Query: 976 EDFIEPPSFDDGPMESEEDIAKA-------------------YXMDSKVKKTTGFGKAKK 854
EDFIEP SFDDGPMESEE+IAKA Y MDSKVKKTT FGK KK
Sbjct: 83 EDFIEPASFDDGPMESEEEIAKAYEELYGAAYSGETFLGNDIYAMDSKVKKTTSFGKTKK 142
Query: 853 EKSKDGFDEXXXXXXXXXXXXXXXXQMHFRAIXXXXXXXXXXXXXXXXXXXXXXXVQKSA 674
EK+KDGFDE Q+HFRA+ VQKSA
Sbjct: 143 EKAKDGFDERVVQVRRVTKVVKGGKQLHFRAVVVVGDKKGQVGVGVGKAKEVIAAVQKSA 202
Query: 673 VNARRNLITVPMTKYLTFPHR 611
VNARRNLITVPMTKYLTFPHR
Sbjct: 203 VNARRNLITVPMTKYLTFPHR 223
>ref|XP_002509457.1| 30S ribosomal protein S5, putative [Ricinus communis]
gi|223549356|gb|EEF50844.1| 30S ribosomal protein S5,
putative [Ricinus communis]
Length = 309
Score = 145 bits (367), Expect = 3e-32
Identities = 87/194 (44%), Positives = 107/194 (55%), Gaps = 20/194 (10%)
Frame = -2
Query: 1132 FIPKTTQKPPFYLLLNPTKLNPITPNSTPAETTYFDNTDPEEISTYDPPERPEDFIEPPS 953
F P+ TQ +L L+ + T +S+ +TT+FDN +PE+ +DPP PEDF+ PPS
Sbjct: 38 FSPRLTQ----FLSLSSQPITITTASSSDIDTTFFDNLNPEDDIVFDPPTPPEDFVPPPS 93
Query: 952 FDDGPMESEEDIAKA-------------------YXMDSKVKKTTGFG-KAKKEKSKDGF 833
FD+ PME+EE+IA A Y MDSKVKKTTGFG K K+EK +DGF
Sbjct: 94 FDEEPMETEEEIAAAYEDLYGAGYSGVSYLGNDVYVMDSKVKKTTGFGSKGKREKIRDGF 153
Query: 832 DEXXXXXXXXXXXXXXXXQMHFRAIXXXXXXXXXXXXXXXXXXXXXXXVQKSAVNARRNL 653
+E Q+HFRAI VQKSAVNARRN+
Sbjct: 154 EERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVIAAVQKSAVNARRNI 213
Query: 652 ITVPMTKYLTFPHR 611
ITVPMTKYLTFPHR
Sbjct: 214 ITVPMTKYLTFPHR 227
>ref|XP_002305129.1| hypothetical protein POPTR_0004s04550g [Populus trichocarpa]
gi|118487850|gb|ABK95748.1| unknown [Populus trichocarpa]
gi|222848093|gb|EEE85640.1| hypothetical protein
POPTR_0004s04550g [Populus trichocarpa]
Length = 311
Score = 143 bits (361), Expect = 2e-31
Identities = 88/207 (42%), Positives = 112/207 (54%), Gaps = 33/207 (15%)
Frame = -2
Query: 1132 FIPKTTQKPPFYLLLNPTK--LNPIT-----------PNSTPAETTYFDNTDPEEISTYD 992
FI T++ P L ++P L+P++ NS+ +T++FDN +PEE YD
Sbjct: 23 FIKPTSKLHPLSLSISPKSSFLSPLSYHPKIITIITKANSSDIDTSFFDNLNPEEEFVYD 82
Query: 991 PPERPEDFIEPPSFDDGPMESEEDIAKA-------------------YXMDSKVKKTTGF 869
PP PED+I PPSFD+GP+E+EE+IA A Y MDSKVKKT+G+
Sbjct: 83 PPTPPEDYIPPPSFDEGPIETEEEIAAAYEELYGPAYSGVSVLGKDIYVMDSKVKKTSGW 142
Query: 868 G-KAKKEKSKDGFDEXXXXXXXXXXXXXXXXQMHFRAIXXXXXXXXXXXXXXXXXXXXXX 692
G + KKEK KDGFDE Q+HFRA+
Sbjct: 143 GSRVKKEKIKDGFDERVVQVRRVTKVVKGGKQLHFRAVVIVGDKQGRVGVGVGKAKEVIV 202
Query: 691 XVQKSAVNARRNLITVPMTKYLTFPHR 611
VQKSA+NARRN+ITVPMTKYLTFPHR
Sbjct: 203 AVQKSALNARRNIITVPMTKYLTFPHR 229
>ref|XP_006387270.1| hypothetical protein POPTR_1364s00200g, partial [Populus trichocarpa]
gi|550306177|gb|ERP46184.1| hypothetical protein
POPTR_1364s00200g, partial [Populus trichocarpa]
Length = 228
Score = 141 bits (356), Expect = 6e-31
Identities = 87/206 (42%), Positives = 111/206 (53%), Gaps = 33/206 (16%)
Frame = -2
Query: 1132 FIPKTTQKPPFYLLLNPTK--LNPIT-----------PNSTPAETTYFDNTDPEEISTYD 992
FI T++ P L ++P L+P++ NS+ +T++FDN +PEE YD
Sbjct: 23 FIKPTSKLHPLSLSISPKSSFLSPLSYHPKIITIITKANSSDIDTSFFDNLNPEEEFVYD 82
Query: 991 PPERPEDFIEPPSFDDGPMESEEDIAKA-------------------YXMDSKVKKTTGF 869
PP PED+I PPSFD+GP+E+EE+IA A Y MDSKVKKT+G+
Sbjct: 83 PPTPPEDYIPPPSFDEGPIETEEEIAAAYEELYGPAYSGVSVLGKDIYVMDSKVKKTSGW 142
Query: 868 G-KAKKEKSKDGFDEXXXXXXXXXXXXXXXXQMHFRAIXXXXXXXXXXXXXXXXXXXXXX 692
G + KKEK KDGFDE Q+HFRA+
Sbjct: 143 GSRVKKEKIKDGFDERVVQVRRVTKVVKGGKQLHFRAVVIVGDKQGRVGVGVGKAKEVIV 202
Query: 691 XVQKSAVNARRNLITVPMTKYLTFPH 614
VQKSA+NARRN+ITVPMTKYLTFPH
Sbjct: 203 AVQKSALNARRNIITVPMTKYLTFPH 228
>ref|XP_004134699.1| PREDICTED: 30S ribosomal protein S5, chloroplastic-like [Cucumis
sativus] gi|449479289|ref|XP_004155560.1| PREDICTED: 30S
ribosomal protein S5, chloroplastic-like [Cucumis
sativus]
Length = 307
Score = 141 bits (356), Expect = 6e-31
Identities = 90/211 (42%), Positives = 109/211 (51%), Gaps = 32/211 (15%)
Frame = -2
Query: 1147 PHHTFFIPKTTQKPPFYLLLNPTKLNPITPNSTPA------------ETTYFDNTDPEEI 1004
P H IP PF LL + L PI+ +S+ + +TT+FDN +P+E
Sbjct: 18 PSHRLSIPLFK---PFPLLHSTVFLLPISSSSSSSILSATRAKSSDIDTTFFDNVNPQED 74
Query: 1003 STYDPPERPEDFIEPPSFDDGPMESEEDIAKA-------------------YXMDSKVKK 881
YDPPE PE F+ PPSFD+GP+E+EE+IA Y MDSKVKK
Sbjct: 75 IVYDPPEVPEGFVPPPSFDEGPIETEEEIAAGYEEIYGPAYSGVSVLGNDIYVMDSKVKK 134
Query: 880 TTGFG-KAKKEKSKDGFDEXXXXXXXXXXXXXXXXQMHFRAIXXXXXXXXXXXXXXXXXX 704
GFG KAKK+K +DGFDE Q+HFRAI
Sbjct: 135 AGGFGSKAKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAK 194
Query: 703 XXXXXVQKSAVNARRNLITVPMTKYLTFPHR 611
VQKSAVNARRN++TVPMTKYLTFPHR
Sbjct: 195 EVITAVQKSAVNARRNIVTVPMTKYLTFPHR 225
>gb|EOY28207.1| Ribosomal protein S5 family protein [Theobroma cacao]
Length = 303
Score = 138 bits (348), Expect = 5e-30
Identities = 86/200 (43%), Positives = 103/200 (51%), Gaps = 31/200 (15%)
Frame = -2
Query: 1117 TQKPPFYLL----LNPTKLNPITPN--------STPAETTYFDNTDPEEISTYDPPERPE 974
T PPF + L P L+ P+ ++ +T++FDN +PEE +DPP PE
Sbjct: 22 TPTPPFSFVFPGPLKPFSLSRSFPSLSLIAHAKASDIDTSFFDNVNPEEDVVFDPPTPPE 81
Query: 973 DFIEPPSFDDGPMESEEDIAKA-------------------YXMDSKVKKTTGFGKAKKE 851
F PPSFDDGP E+E++IA A Y MDSKVKKT+ FGK KKE
Sbjct: 82 GFTPPPSFDDGPDETEDEIAAAYEELYGPAYSGFSVLGNDVYVMDSKVKKTSAFGKVKKE 141
Query: 850 KSKDGFDEXXXXXXXXXXXXXXXXQMHFRAIXXXXXXXXXXXXXXXXXXXXXXXVQKSAV 671
K +DGF+E Q+HFRAI VQKSAV
Sbjct: 142 KVRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVIAAVQKSAV 201
Query: 670 NARRNLITVPMTKYLTFPHR 611
NARRNLITVPMTKYLTFPHR
Sbjct: 202 NARRNLITVPMTKYLTFPHR 221
>ref|XP_004294008.1| PREDICTED: 30S ribosomal protein S5, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 314
Score = 130 bits (328), Expect = 1e-27
Identities = 74/163 (45%), Positives = 89/163 (54%), Gaps = 19/163 (11%)
Frame = -2
Query: 1042 ETTYFDNTDPEEISTYDPPERPEDFIEPPSFDDGPMESEEDIAKA--------------- 908
ETT+FDN DPE + ++PPE PE F+ PPSFD+ +E+E++IA A
Sbjct: 70 ETTFFDNDDPEYEAVFEPPEAPEGFVPPPSFDEESLETEDEIAAAYEELYGPAYSGMTVL 129
Query: 907 ----YXMDSKVKKTTGFGKAKKEKSKDGFDEXXXXXXXXXXXXXXXXQMHFRAIXXXXXX 740
Y MD+KVKK FGK KKEK +DGF+E Q+HFRAI
Sbjct: 130 GNDIYVMDAKVKKLGAFGKLKKEKIRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDK 189
Query: 739 XXXXXXXXXXXXXXXXXVQKSAVNARRNLITVPMTKYLTFPHR 611
VQKSAVNARRN+ITVPMTKYLTFPHR
Sbjct: 190 QGNVGVGVGKAKEVIGAVQKSAVNARRNIITVPMTKYLTFPHR 232
>gb|EXC18094.1| 30S ribosomal protein S5 [Morus notabilis]
Length = 337
Score = 130 bits (326), Expect = 2e-27
Identities = 77/173 (44%), Positives = 96/173 (55%), Gaps = 21/173 (12%)
Frame = -2
Query: 1069 PITPNSTPAETTYFDNTD-PEEISTYDPPERPEDFIEPPSFDDGPMESEEDIAKA----- 908
PI P S+ ++T++F + E+ + Y+PPE PE F+ PPSFD+GPME+E++IA A
Sbjct: 58 PIPPKSSDSDTSFFTTDEFDEDDAVYEPPEAPEGFVAPPSFDEGPMETEDEIAAAYEELY 117
Query: 907 --------------YXMDSKVKKTTGFGK-AKKEKSKDGFDEXXXXXXXXXXXXXXXXQM 773
Y M+SKVKKT GFG AKKEK +DGF+E Q+
Sbjct: 118 GPAYSGVSVLGNDIYVMNSKVKKTGGFGSGAKKEKIRDGFEERVVQVRRVTKVVKGGKQL 177
Query: 772 HFRAIXXXXXXXXXXXXXXXXXXXXXXXVQKSAVNARRNLITVPMTKYLTFPH 614
HFRAI VQKSAVNARRN+ITVPMTKYLTFPH
Sbjct: 178 HFRAIVVVGDKKGQVGVGVGKAKEVIAAVQKSAVNARRNIITVPMTKYLTFPH 230
>gb|EMJ12857.1| hypothetical protein PRUPE_ppa008978mg [Prunus persica]
Length = 312
Score = 130 bits (326), Expect = 2e-27
Identities = 83/194 (42%), Positives = 99/194 (51%), Gaps = 24/194 (12%)
Frame = -2
Query: 1120 TTQKPPFYLLLNPTKLNPITP---NSTPA--ETTYFDNTDPEEISTYDPPERPEDFIEPP 956
T K P L L+ T + T N+ A ET++FDN DPE ++PPE PE F+ PP
Sbjct: 37 TKPKRPISLFLSSTSSSRPTTVIFNAAAADVETSFFDNEDPEFDGVFEPPEVPEGFVPPP 96
Query: 955 SFDDGPMESEEDIAKA-------------------YXMDSKVKKTTGFGKAKKEKSKDGF 833
SFDD E+E++IA A Y MDS VKKT FGK KKEK +DGF
Sbjct: 97 SFDDESSETEDEIAAAYEELYGPAYSGESVLGNDIYVMDSNVKKTGAFGKLKKEKIRDGF 156
Query: 832 DEXXXXXXXXXXXXXXXXQMHFRAIXXXXXXXXXXXXXXXXXXXXXXXVQKSAVNARRNL 653
+E Q+HFRAI VQKSAVNARRN+
Sbjct: 157 EERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVIGAVQKSAVNARRNI 216
Query: 652 ITVPMTKYLTFPHR 611
I+VPMTKYLTFPHR
Sbjct: 217 ISVPMTKYLTFPHR 230
>ref|XP_003542738.1| PREDICTED: 30S ribosomal protein S5, chloroplastic-like [Glycine max]
Length = 316
Score = 129 bits (324), Expect = 3e-27
Identities = 77/186 (41%), Positives = 98/186 (52%), Gaps = 20/186 (10%)
Frame = -2
Query: 1108 PPFYLLLNPTKLNPITPNSTPAETTYFDNTDPEEISTYDPPERPEDFIEPPSFDDGPMES 929
PP + P L + S +T++FDN +P++ T++PPE PE F+ PPSFDDGP+E+
Sbjct: 49 PPSHQPSKPLFLTLKSKPSDDIDTSFFDNINPQDDITFNPPEPPEGFVAPPSFDDGPLET 108
Query: 928 EEDIAKA-------------------YXMDSKVKKTTGFGK-AKKEKSKDGFDEXXXXXX 809
E++IA A Y MD+KVKK TGFG AKKEK +DGF+E
Sbjct: 109 EDEIAAAYEELYGPGYSGVSVLGNDVYVMDAKVKKETGFGSGAKKEKVRDGFEERVVQVR 168
Query: 808 XXXXXXXXXXQMHFRAIXXXXXXXXXXXXXXXXXXXXXXXVQKSAVNARRNLITVPMTKY 629
Q+ FRA+ VQKSAVNARRN+I VPMTKY
Sbjct: 169 RVTKVVKGGKQLRFRAVVVVGDKKGQVGVGVGKAKEVIAAVQKSAVNARRNIIKVPMTKY 228
Query: 628 LTFPHR 611
TFPHR
Sbjct: 229 STFPHR 234
>emb|CBI30587.3| unnamed protein product [Vitis vinifera]
Length = 253
Score = 129 bits (324), Expect = 3e-27
Identities = 80/193 (41%), Positives = 101/193 (52%), Gaps = 21/193 (10%)
Frame = -2
Query: 1126 PKTTQKPPFYLLLNPTKLNPITP-NSTPAETTYFDNTDPEEISTYDPPERPEDFIEPPSF 950
PK+ PF + P KL T + +ETT+F++ +E ++P PE F+ PPSF
Sbjct: 47 PKSKASKPFPVF--PFKLTSTTKLKAADSETTFFEDPSLQEEVVFEPTPPPEGFVPPPSF 104
Query: 949 DDGPMESEEDIAKAY-------------------XMDSKVKKTTGFG-KAKKEKSKDGFD 830
DDGPME+E++IA AY MDSK+KK+TGFG K KKEK +DGF+
Sbjct: 105 DDGPMETEDEIAAAYEEIYGPAYSGVSLLGNDPFVMDSKMKKSTGFGSKVKKEKVRDGFE 164
Query: 829 EXXXXXXXXXXXXXXXXQMHFRAIXXXXXXXXXXXXXXXXXXXXXXXVQKSAVNARRNLI 650
E Q+HFRA+ VQKSA NARRN+I
Sbjct: 165 ERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVGVGKAKEVIAAVQKSATNARRNII 224
Query: 649 TVPMTKYLTFPHR 611
TVPMTKYLTFPHR
Sbjct: 225 TVPMTKYLTFPHR 237
>ref|XP_003529335.1| PREDICTED: 30S ribosomal protein S5, chloroplastic-like [Glycine max]
Length = 300
Score = 129 bits (323), Expect = 4e-27
Identities = 79/192 (41%), Positives = 100/192 (52%), Gaps = 20/192 (10%)
Frame = -2
Query: 1126 PKTTQKPPFYLLLNPTKLNPITPNSTPAETTYFDNTDPEEISTYDPPERPEDFIEPPSFD 947
P + P LL T L + S +T++FDN +P++ T++PPE PE F+ PPSFD
Sbjct: 29 PPSLLSKPLPLLFATTTLK--SKPSDDIDTSFFDNINPQDDITFNPPEPPEGFVAPPSFD 86
Query: 946 DGPMESEEDIAKA-------------------YXMDSKVKKTTGFGK-AKKEKSKDGFDE 827
DGP+E+E++IA A Y MD+KVKK TGFG AKKEK +DGF+E
Sbjct: 87 DGPLETEDEIAAAYEELYGPGYSGVSVLGNDVYVMDAKVKKETGFGSGAKKEKVRDGFEE 146
Query: 826 XXXXXXXXXXXXXXXXQMHFRAIXXXXXXXXXXXXXXXXXXXXXXXVQKSAVNARRNLIT 647
Q+ FRA+ VQKSAVNARRN+I
Sbjct: 147 RVVQVRRVTKVVKGGKQLRFRAVVVVGDKKGSVGVGVGKAKEVIAAVQKSAVNARRNIIK 206
Query: 646 VPMTKYLTFPHR 611
VPMTKY TFPHR
Sbjct: 207 VPMTKYSTFPHR 218
>ref|XP_002274092.2| PREDICTED: 30S ribosomal protein S5, chloroplastic, partial [Vitis
vinifera]
Length = 257
Score = 127 bits (319), Expect = 1e-26
Identities = 79/192 (41%), Positives = 100/192 (52%), Gaps = 21/192 (10%)
Frame = -2
Query: 1126 PKTTQKPPFYLLLNPTKLNPITP-NSTPAETTYFDNTDPEEISTYDPPERPEDFIEPPSF 950
PK+ PF + P KL T + +ETT+F++ +E ++P PE F+ PPSF
Sbjct: 68 PKSKASKPFPVF--PFKLTSTTKLKAADSETTFFEDPSLQEEVVFEPTPPPEGFVPPPSF 125
Query: 949 DDGPMESEEDIAKAY-------------------XMDSKVKKTTGFG-KAKKEKSKDGFD 830
DDGPME+E++IA AY MDSK+KK+TGFG K KKEK +DGF+
Sbjct: 126 DDGPMETEDEIAAAYEEIYGPAYSGVSLLGNDPFVMDSKMKKSTGFGSKVKKEKVRDGFE 185
Query: 829 EXXXXXXXXXXXXXXXXQMHFRAIXXXXXXXXXXXXXXXXXXXXXXXVQKSAVNARRNLI 650
E Q+HFRA+ VQKSA NARRN+I
Sbjct: 186 ERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVGVGKAKEVIAAVQKSATNARRNII 245
Query: 649 TVPMTKYLTFPH 614
TVPMTKYLTFPH
Sbjct: 246 TVPMTKYLTFPH 257
>sp|Q9ST69.1|RR5_SPIOL RecName: Full=30S ribosomal protein S5, chloroplastic; Flags:
Precursor gi|188036206|pdb|3BBN|E Chain E, Homology Model
For The Spinach Chloroplast 30s Subunit Fitted To 9.4a
Cryo-Em Map Of The 70s Chlororibosome.
gi|5725342|emb|CAA63650.1| ribosomal protein S5 [Spinacia
oleracea]
Length = 308
Score = 123 bits (309), Expect = 2e-25
Identities = 77/202 (38%), Positives = 101/202 (50%), Gaps = 23/202 (11%)
Frame = -2
Query: 1147 PHHTFFIPKTTQKPPFYLLLNPTKLNPI---TPNSTPAETTYFDNTDPEEISTYDPPERP 977
P T + ++ P +L L+ T+ P + T+F+ +P+E T+DPPE+P
Sbjct: 25 PTTTTLLSLSSSSKPLFLSLSSTRSFPTHLYCIKKDDIDITFFEQDNPDEEITFDPPEKP 84
Query: 976 EDFIEPPSFDDGPMESEEDIAKA-------------------YXMDSKVKKTTGFG-KAK 857
E +I P + D+ P ESEE+IA A Y MDSK+KK TGFG K+K
Sbjct: 85 EGYIPPRAVDEPPFESEEEIALAYEELYGAAYSGESLLGNDVYAMDSKIKKATGFGSKSK 144
Query: 856 KEKSKDGFDEXXXXXXXXXXXXXXXXQMHFRAIXXXXXXXXXXXXXXXXXXXXXXXVQKS 677
KEK +DGF+E M FRAI VQK+
Sbjct: 145 KEKIRDGFEENVVQVRRVTKVVKGGKHMRFRAIVVVGDKKGQVGVGVGKAKEVVSAVQKA 204
Query: 676 AVNARRNLITVPMTKYLTFPHR 611
AV+ARRN+ITVPMTKYLTFPHR
Sbjct: 205 AVDARRNIITVPMTKYLTFPHR 226
>ref|XP_006377376.1| hypothetical protein POPTR_0011s05370g [Populus trichocarpa]
gi|550327665|gb|ERP55173.1| hypothetical protein
POPTR_0011s05370g [Populus trichocarpa]
Length = 294
Score = 123 bits (308), Expect = 2e-25
Identities = 75/176 (42%), Positives = 95/176 (53%), Gaps = 9/176 (5%)
Frame = -2
Query: 1111 KPPFYLLLN--PTKLNPIT-PNSTPAETTYFDNTDPEEISTYDPPERPEDFIEPPSFDDG 941
K PF L + P + IT NS+ +T++FDN +PEE +DPP +PED+I PPSFD+G
Sbjct: 47 KSPFLYLFSSHPKIITTITRANSSDIDTSFFDNVNPEEEVVFDPPTQPEDYIPPPSFDEG 106
Query: 940 PMESEEDIAKAY--XMDSKVKKTTGFGK----AKKEKSKDGFDEXXXXXXXXXXXXXXXX 779
PME+EE+IA AY + GK +K+KDG DE
Sbjct: 107 PMETEEEIAAAYEELYGPAYSGVSFLGKDIYVMDSKKTKDGLDERVVQVRRVTKVVKGGK 166
Query: 778 QMHFRAIXXXXXXXXXXXXXXXXXXXXXXXVQKSAVNARRNLITVPMTKYLTFPHR 611
Q+HFRA+ VQKSA+NARRN+ITVPMTKYLTFPHR
Sbjct: 167 QLHFRAVVVVGDKQGQVGVGVGKAKEVIAAVQKSALNARRNIITVPMTKYLTFPHR 222
>ref|XP_004505073.1| PREDICTED: LOW QUALITY PROTEIN: 30S ribosomal protein S5,
chloroplastic-like [Cicer arietinum]
Length = 307
Score = 122 bits (307), Expect = 3e-25
Identities = 80/197 (40%), Positives = 98/197 (49%), Gaps = 33/197 (16%)
Frame = -2
Query: 1102 FYLLLNPTKLN----PITP---------NSTPAETTYFDNTDPEEISTYDPPERPEDFIE 962
F LL N KL P TP +S + ++FD + PEE T++PPE PE F+
Sbjct: 29 FSLLSNTNKLTFPLLPKTPXSLSTSKSKSSDETDNSFFDTSVPEEDLTFNPPEIPEGFVA 88
Query: 961 PPSFDDGPMESEEDIAKA-------------------YXMDSKVKKTTGFGKA-KKEKSK 842
PPS +DGP+ESE++IA A Y MDSK KK +GFG KKEK +
Sbjct: 89 PPSIEDGPVESEDEIAAAYEELYGTGYSGVSVLGNDIYAMDSKAKKMSGFGSGLKKEKIR 148
Query: 841 DGFDEXXXXXXXXXXXXXXXXQMHFRAIXXXXXXXXXXXXXXXXXXXXXXXVQKSAVNAR 662
DGF+E QM FRAI VQK+A+NAR
Sbjct: 149 DGFEERVVQVRRVTKVVKGGKQMRFRAIVVVGDKKGQVGVGVGKAKEVIAAVQKAAINAR 208
Query: 661 RNLITVPMTKYLTFPHR 611
RNL+ VPMTKYLTFPHR
Sbjct: 209 RNLVRVPMTKYLTFPHR 225
>ref|XP_006467770.1| PREDICTED: 30S ribosomal protein S5, chloroplastic-like [Citrus
sinensis]
Length = 306
Score = 118 bits (295), Expect = 7e-24
Identities = 70/159 (44%), Positives = 85/159 (53%), Gaps = 19/159 (11%)
Frame = -2
Query: 1030 FDNTDPEEISTYDPPERPEDFIEPPSFDDGPMESEEDIAKA------------------- 908
F+N D E+ + +DPP PED+ PPSFD+ PME+E++IA A
Sbjct: 67 FNNPD-EDAAVFDPPTPPEDYTPPPSFDELPMETEDEIAAAYEELYGPAYAGVSVSGNDV 125
Query: 907 YXMDSKVKKTTGFGKAKKEKSKDGFDEXXXXXXXXXXXXXXXXQMHFRAIXXXXXXXXXX 728
Y MDSK KKT+ FGK KKEK KDGF+E Q+ FRAI
Sbjct: 126 YVMDSKAKKTSAFGKTKKEKVKDGFEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKKGQV 185
Query: 727 XXXXXXXXXXXXXVQKSAVNARRNLITVPMTKYLTFPHR 611
VQKSAV+ARRN++TVPMTKYLTFPHR
Sbjct: 186 GVGVAKAKEVIAAVQKSAVDARRNIVTVPMTKYLTFPHR 224
>ref|XP_006449367.1| hypothetical protein CICLE_v10016057mg [Citrus clementina]
gi|557551978|gb|ESR62607.1| hypothetical protein
CICLE_v10016057mg [Citrus clementina]
Length = 305
Score = 118 bits (295), Expect = 7e-24
Identities = 70/159 (44%), Positives = 85/159 (53%), Gaps = 19/159 (11%)
Frame = -2
Query: 1030 FDNTDPEEISTYDPPERPEDFIEPPSFDDGPMESEEDIAKA------------------- 908
F+N D E+ + +DPP PED+ PPSFD+ PME+E++IA A
Sbjct: 66 FNNPD-EDAAVFDPPTPPEDYTPPPSFDELPMETEDEIAAAYEELYGPAYAGVSVLGNDV 124
Query: 907 YXMDSKVKKTTGFGKAKKEKSKDGFDEXXXXXXXXXXXXXXXXQMHFRAIXXXXXXXXXX 728
Y MDSK KKT+ FGK KKEK KDGF+E Q+ FRAI
Sbjct: 125 YVMDSKAKKTSAFGKTKKEKVKDGFEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKKGQV 184
Query: 727 XXXXXXXXXXXXXVQKSAVNARRNLITVPMTKYLTFPHR 611
VQKSAV+ARRN++TVPMTKYLTFPHR
Sbjct: 185 GVGVAKAKEVIAAVQKSAVDARRNIVTVPMTKYLTFPHR 223
>gb|ESW31331.1| hypothetical protein PHAVU_002G229700g [Phaseolus vulgaris]
Length = 301
Score = 115 bits (287), Expect = 6e-23
Identities = 75/199 (37%), Positives = 96/199 (48%), Gaps = 20/199 (10%)
Frame = -2
Query: 1147 PHHTFFIPKTTQKPPFYLLLNPTKLNPITPNSTPAETTYFDNTDPEEISTYDPPERPEDF 968
P HT + KP + L K P S +T++FDN +P++ ++PPE PE F
Sbjct: 27 PPHT--VSLLFAKPQHHPSLLCAKCKP----SDDIDTSFFDNLNPQDDIDFNPPEPPEGF 80
Query: 967 IEPPSFDDGPMESEEDIAKAY-------------------XMDSKVKKTTGFGK-AKKEK 848
+ PPSFDD P+E+E++IA AY D+ VKK TGFG KKEK
Sbjct: 81 VAPPSFDDSPLETEDEIAAAYEELYGPAFSGVTVLGNDVFETDALVKKDTGFGSGGKKEK 140
Query: 847 SKDGFDEXXXXXXXXXXXXXXXXQMHFRAIXXXXXXXXXXXXXXXXXXXXXXXVQKSAVN 668
+DGF+E Q+ FRA+ VQKSA N
Sbjct: 141 IRDGFEERVVQVRRVTKVVKGGKQLRFRAVVIVGDRKGQVGVGVGKAKEVVAAVQKSAAN 200
Query: 667 ARRNLITVPMTKYLTFPHR 611
ARRN+I VPMTKY TFPHR
Sbjct: 201 ARRNIIKVPMTKYSTFPHR 219