BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00002438
         (1274 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006345106.1| PREDICTED: pentatricopeptide repeat-containi...   556   0.0  
ref|XP_004236066.1| PREDICTED: pentatricopeptide repeat-containi...   552   0.0  
emb|CBI15328.3| unnamed protein product [Vitis vinifera]              399   e-135
ref|XP_002265397.2| PREDICTED: pentatricopeptide repeat-containi...   397   e-134
ref|XP_003536123.1| PREDICTED: pentatricopeptide repeat-containi...   385   e-127
gb|ESW16823.1| hypothetical protein PHAVU_007G187600g [Phaseolus...   387   e-127
ref|XP_004138218.1| PREDICTED: pentatricopeptide repeat-containi...   375   e-126
gb|EOY22114.1| Pentatricopeptide repeat-containing protein, puta...   376   e-123
ref|XP_003556470.1| PREDICTED: pentatricopeptide repeat-containi...   376   e-123
ref|XP_004301536.1| PREDICTED: pentatricopeptide repeat-containi...   363   e-122
ref|XP_002514631.1| pentatricopeptide repeat-containing protein,...   364   e-121
ref|XP_002302931.1| predicted protein [Populus trichocarpa]           358   e-120
ref|XP_006394550.1| hypothetical protein EUTSA_v10004006mg [Eutr...   355   e-117
ref|NP_200904.1| pentatricopeptide repeat-containing protein [Ar...   357   e-117
gb|AAM63453.1| unknown [Arabidopsis thaliana]                         356   e-117
ref|XP_002866406.1| pentatricopeptide repeat-containing protein ...   355   e-116
ref|XP_006440794.1| hypothetical protein CICLE_v10019809mg [Citr...   375   e-116
gb|EMJ11126.1| hypothetical protein PRUPE_ppa004540mg [Prunus pe...   342   e-115
ref|XP_006282075.1| hypothetical protein CARUB_v10028321mg [Caps...   358   e-115
ref|XP_006477702.1| PREDICTED: pentatricopeptide repeat-containi...   370   e-115

>ref|XP_006345106.1| PREDICTED: pentatricopeptide repeat-containing protein PNM1,
            mitochondrial-like [Solanum tuberosum]
          Length = 521

 Score =  556 bits (1433), Expect(2) = 0.0
 Identities = 286/336 (85%), Positives = 296/336 (88%), Gaps = 8/336 (2%)
 Frame = +1

Query: 94   CISSSATNQSHHLPSSQQLFLSKPHLFTSP------FSFTLYSTSFRSFSTQP--NEETT 249
            CI SSATNQ+HHLP SQ L LSK H FTSP      FSF+ YSTSFRSFS+QP  ++E T
Sbjct: 17   CIYSSATNQTHHLPCSQ-LSLSKTHFFTSPLPHYDSFSFSHYSTSFRSFSSQPESDQEET 75

Query: 250  TAQSLSSELVKELDAESLSIPQGLDLSFSHVXXXXXXXXXXXXXSPDAGRTVLGFFKWVK 429
            TAQSLSSELVKELDAESLSIPQ LDLSFSHV             SPDAGRTVLGFFKWVK
Sbjct: 76   TAQSLSSELVKELDAESLSIPQSLDLSFSHVNLTPSLILTTLNLSPDAGRTVLGFFKWVK 135

Query: 430  SKESFNLDDEVVSYFVDYFGRRKDFKSVNDVLSDGVGLTGRKTLESMVDRLVRAGRPTQT 609
            SKESF +DDEVVSYFVDYFGRRKDFK+  DVL DG+GL GRKTLESMVDRLVRAGR TQT
Sbjct: 136  SKESFKVDDEVVSYFVDYFGRRKDFKAAQDVLIDGIGLAGRKTLESMVDRLVRAGRSTQT 195

Query: 610  VAFFENMEKDYGLVRDLDSLKLVVSRLCEHGFARYAEKMVKSLASEFFPDEYICDMLIRG 789
            VAFFENMEKDYGLVRDLDSLKLVVSRLCEHGFA YAEKMVKSLASEFFPDEYICDMLIRG
Sbjct: 196  VAFFENMEKDYGLVRDLDSLKLVVSRLCEHGFASYAEKMVKSLASEFFPDEYICDMLIRG 255

Query: 790  WCVDGKLDEAQRLAGEMYRGGFEIGTSAYNGILDCVCKLCRKKDPFRLQNEAEKVLLEME 969
            WC+DGKLDEAQRLAGEMYRGGFEIG SAYN ILDCVCKLCRKKDPFRLQ+EAE VLLEME
Sbjct: 256  WCIDGKLDEAQRLAGEMYRGGFEIGASAYNAILDCVCKLCRKKDPFRLQSEAENVLLEME 315

Query: 970  EKGVPRDVETFNVLITNLCKIRKTEDALNLFYRMGE 1077
            EKGVPRDVETFNVLITNLCKIRKTEDALNLFYRMGE
Sbjct: 316  EKGVPRDVETFNVLITNLCKIRKTEDALNLFYRMGE 351



 Score =  114 bits (285), Expect(2) = 0.0
 Identities = 52/56 (92%), Positives = 55/56 (98%)
 Frame = +2

Query: 1106 EMIDRMKSDGFGDALDKKAYYDFLKILCGIERIDHAMSIFAKMKEDGCKPGLKTYD 1273
            EMIDRMKS GFGDALDKKAYY+FLKILCGIER+DHAMS+FAKMKEDGCKPGLKTYD
Sbjct: 379  EMIDRMKSAGFGDALDKKAYYEFLKILCGIERLDHAMSVFAKMKEDGCKPGLKTYD 434


>ref|XP_004236066.1| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
            mitochondrial-like [Solanum lycopersicum]
          Length = 522

 Score =  552 bits (1423), Expect(2) = 0.0
 Identities = 283/336 (84%), Positives = 295/336 (87%), Gaps = 8/336 (2%)
 Frame = +1

Query: 94   CISSSATNQSHHLPSSQQLFLSKPHLFTSP------FSFTLYSTSFRSFSTQP--NEETT 249
            CISSSATNQ+HHLP SQ + LSK H FTSP      FSF+ YSTSFRSFS+Q   ++E T
Sbjct: 17   CISSSATNQTHHLPCSQ-ISLSKTHFFTSPLPHYDSFSFSHYSTSFRSFSSQSGRDQEET 75

Query: 250  TAQSLSSELVKELDAESLSIPQGLDLSFSHVXXXXXXXXXXXXXSPDAGRTVLGFFKWVK 429
            TAQSLSSELVKELDAESLSIPQ LDLSFSHV             SPDAGRTVLGFFKWVK
Sbjct: 76   TAQSLSSELVKELDAESLSIPQSLDLSFSHVNLTPSLILTTLNLSPDAGRTVLGFFKWVK 135

Query: 430  SKESFNLDDEVVSYFVDYFGRRKDFKSVNDVLSDGVGLTGRKTLESMVDRLVRAGRPTQT 609
            SKESF +DDEVVS FVDYFGRRKDFK+  DVL DG+GLTGRKTLESMVDRLVRAGRPTQT
Sbjct: 136  SKESFKVDDEVVSCFVDYFGRRKDFKAAQDVLIDGIGLTGRKTLESMVDRLVRAGRPTQT 195

Query: 610  VAFFENMEKDYGLVRDLDSLKLVVSRLCEHGFARYAEKMVKSLASEFFPDEYICDMLIRG 789
            VAFFENMEKDYGL RDLDSLKLVVSRLCEHGFA YAEKMVKSLA EFFPDEYICDML+RG
Sbjct: 196  VAFFENMEKDYGLARDLDSLKLVVSRLCEHGFASYAEKMVKSLACEFFPDEYICDMLVRG 255

Query: 790  WCVDGKLDEAQRLAGEMYRGGFEIGTSAYNGILDCVCKLCRKKDPFRLQNEAEKVLLEME 969
            WC+DGKLDEAQRLAGEMYRGGFEIG SAYN ILDCVCKLCRKKDPFRLQ+EAE VLLEME
Sbjct: 256  WCIDGKLDEAQRLAGEMYRGGFEIGASAYNAILDCVCKLCRKKDPFRLQSEAENVLLEME 315

Query: 970  EKGVPRDVETFNVLITNLCKIRKTEDALNLFYRMGE 1077
            EKGVPRDVETFNVLITNLCKIRKTEDALNLFYRMGE
Sbjct: 316  EKGVPRDVETFNVLITNLCKIRKTEDALNLFYRMGE 351



 Score =  113 bits (282), Expect(2) = 0.0
 Identities = 51/56 (91%), Positives = 55/56 (98%)
 Frame = +2

Query: 1106 EMIDRMKSDGFGDALDKKAYYDFLKILCGIERIDHAMSIFAKMKEDGCKPGLKTYD 1273
            EMIDRM+S GFGDALDKKAYY+FLKILCGIER+DHAMS+FAKMKEDGCKPGLKTYD
Sbjct: 379  EMIDRMRSAGFGDALDKKAYYEFLKILCGIERLDHAMSVFAKMKEDGCKPGLKTYD 434


>emb|CBI15328.3| unnamed protein product [Vitis vinifera]
          Length = 532

 Score =  399 bits (1026), Expect(2) = e-135
 Identities = 206/345 (59%), Positives = 252/345 (73%), Gaps = 17/345 (4%)
 Frame = +1

Query: 94   CISSSATNQSHHLPSSQ----QLFLSKPHLFTSPFSFT-----LYSTSF---RSFSTQPN 237
            C SSS+++ S    SS     Q +   P L   P+          S SF   R FS+QPN
Sbjct: 20   CFSSSSSSSSSSSSSSSSSLVQSYCLSPTLSLDPYCLCSSQRHFVSPSFPLSRRFSSQPN 79

Query: 238  -----EETTTAQSLSSELVKELDAESLSIPQGLDLSFSHVXXXXXXXXXXXXXSPDAGRT 402
                 + +  AQSLSSEL+K+ D+E + I Q L LSFSH+             SPDAGRT
Sbjct: 80   NSADDDHSQIAQSLSSELLKDPDSEPVPIIQRLQLSFSHITPSPPLILQTLNTSPDAGRT 139

Query: 403  VLGFFKWVKSKESFNLDDEVVSYFVDYFGRRKDFKSVNDVLSDGVGLTGRKTLESMVDRL 582
            VLGF+KW+ S   F   DE +S+FVDYFGRRKDFK++++VL DG    G KTLES +DRL
Sbjct: 140  VLGFYKWLSSNPKFVHSDETISFFVDYFGRRKDFKAIHEVLMDGRNFAGAKTLESAIDRL 199

Query: 583  VRAGRPTQTVAFFENMEKDYGLVRDLDSLKLVVSRLCEHGFARYAEKMVKSLASEFFPDE 762
            VRAGR TQ V+FF+ ME DYG  RD +SL +VVS+LCEHGFA +AEK+VK++A+E FP+E
Sbjct: 200  VRAGRATQVVSFFDRMEVDYGFRRDRESLTMVVSKLCEHGFASHAEKVVKNVANEIFPNE 259

Query: 763  YICDMLIRGWCVDGKLDEAQRLAGEMYRGGFEIGTSAYNGILDCVCKLCRKKDPFRLQNE 942
             ICD+LI+GWCVDGKLDEA+RLA EM+RGGFEIGT AYN ILDC+CKLCRKKDPFRL++E
Sbjct: 260  TICDLLIKGWCVDGKLDEARRLAEEMFRGGFEIGTMAYNSILDCICKLCRKKDPFRLESE 319

Query: 943  AEKVLLEMEEKGVPRDVETFNVLITNLCKIRKTEDALNLFYRMGE 1077
            AEK+L++M+  GVPR+VETFNVLITNLCKIRKTEDA+ LFYRMGE
Sbjct: 320  AEKILVDMDVAGVPRNVETFNVLITNLCKIRKTEDAMKLFYRMGE 364



 Score =  110 bits (274), Expect(2) = e-135
 Identities = 49/56 (87%), Positives = 55/56 (98%)
 Frame = +2

Query: 1106 EMIDRMKSDGFGDALDKKAYYDFLKILCGIERIDHAMSIFAKMKEDGCKPGLKTYD 1273
            EMIDRMKS GFG+ALDKKAYY+F+KILCGIERIDHAMS+F+KMKEDGCKPG+KTYD
Sbjct: 392  EMIDRMKSAGFGNALDKKAYYEFIKILCGIERIDHAMSLFSKMKEDGCKPGIKTYD 447


>ref|XP_002265397.2| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
            mitochondrial-like [Vitis vinifera]
          Length = 516

 Score =  397 bits (1020), Expect(2) = e-134
 Identities = 203/333 (60%), Positives = 250/333 (75%), Gaps = 5/333 (1%)
 Frame = +1

Query: 94   CISSSATNQSHHLPSSQQLFLSKPHLFTSPFSFTLYSTSFRSFSTQPN-----EETTTAQ 258
            C+S + +   + L SSQ+ F+S         SF L     R FS+QPN     + +  AQ
Sbjct: 28   CLSPTLSLDPYCLCSSQRHFVSP--------SFPLS----RRFSSQPNNSADDDHSQIAQ 75

Query: 259  SLSSELVKELDAESLSIPQGLDLSFSHVXXXXXXXXXXXXXSPDAGRTVLGFFKWVKSKE 438
            SLSSEL+K+ D+E + I Q L LSFSH+             SPDAGRTVLGF+KW+ S  
Sbjct: 76   SLSSELLKDPDSEPVPIIQRLQLSFSHITPSPPLILQTLNTSPDAGRTVLGFYKWLSSNP 135

Query: 439  SFNLDDEVVSYFVDYFGRRKDFKSVNDVLSDGVGLTGRKTLESMVDRLVRAGRPTQTVAF 618
             F   DE +S+FVDYFGRRKDFK++++VL DG    G KTLES +DRLVRAGR TQ V+F
Sbjct: 136  KFVHSDETISFFVDYFGRRKDFKAIHEVLMDGRNFAGAKTLESAIDRLVRAGRATQVVSF 195

Query: 619  FENMEKDYGLVRDLDSLKLVVSRLCEHGFARYAEKMVKSLASEFFPDEYICDMLIRGWCV 798
            F+ ME DYG  RD +SL +VVS+LCEHGFA +AEK+VK++A+E FP+E ICD+LI+GWCV
Sbjct: 196  FDRMEVDYGFRRDRESLTMVVSKLCEHGFASHAEKVVKNVANEIFPNETICDLLIKGWCV 255

Query: 799  DGKLDEAQRLAGEMYRGGFEIGTSAYNGILDCVCKLCRKKDPFRLQNEAEKVLLEMEEKG 978
            DGKLDEA+RLA EM+RGGFEIGT AYN ILDC+CKLCRKKDPFRL++EAEK+L++M+  G
Sbjct: 256  DGKLDEARRLAEEMFRGGFEIGTMAYNSILDCICKLCRKKDPFRLESEAEKILVDMDVAG 315

Query: 979  VPRDVETFNVLITNLCKIRKTEDALNLFYRMGE 1077
            VPR+VETFNVLITNLCKIRKTEDA+ LFYRMGE
Sbjct: 316  VPRNVETFNVLITNLCKIRKTEDAMKLFYRMGE 348



 Score =  110 bits (274), Expect(2) = e-134
 Identities = 49/56 (87%), Positives = 55/56 (98%)
 Frame = +2

Query: 1106 EMIDRMKSDGFGDALDKKAYYDFLKILCGIERIDHAMSIFAKMKEDGCKPGLKTYD 1273
            EMIDRMKS GFG+ALDKKAYY+F+KILCGIERIDHAMS+F+KMKEDGCKPG+KTYD
Sbjct: 376  EMIDRMKSAGFGNALDKKAYYEFIKILCGIERIDHAMSLFSKMKEDGCKPGIKTYD 431


>ref|XP_003536123.1| PREDICTED: pentatricopeptide repeat-containing protein PNM1,
            mitochondrial-like [Glycine max]
          Length = 509

 Score =  385 bits (990), Expect(2) = e-127
 Identities = 198/321 (61%), Positives = 236/321 (73%), Gaps = 3/321 (0%)
 Frame = +1

Query: 124  HHLPSSQQLFLSKPHLFTSPFSFTLYSTSF---RSFSTQPNEETTTAQSLSSELVKELDA 294
            HH P      L   H  +  +S TL++ SF   R FS++   +   A SLSSEL+KE D+
Sbjct: 28   HHSP------LFPRHSSSHFYSRTLFTPSFFITRHFSSETQTDEI-ASSLSSELLKEPDS 80

Query: 295  ESLSIPQGLDLSFSHVXXXXXXXXXXXXXSPDAGRTVLGFFKWVKSKESFNLDDEVVSYF 474
            ++LS+ Q L+LSFSH+             SP AGRTVLGF +W+ S   F+  D+ +SYF
Sbjct: 81   DALSVSQRLNLSFSHITPTPNLILQTLNLSPQAGRTVLGFHQWLSSNPQFSHTDDTLSYF 140

Query: 475  VDYFGRRKDFKSVNDVLSDGVGLTGRKTLESMVDRLVRAGRPTQTVAFFENMEKDYGLVR 654
            VDYFGRRKDFK+ +DVL+      G KTL S +DRLVRAGR +Q V FFE ME+DYGL R
Sbjct: 141  VDYFGRRKDFKATHDVLAAASPAAGPKTLASAIDRLVRAGRSSQAVQFFERMERDYGLKR 200

Query: 655  DLDSLKLVVSRLCEHGFARYAEKMVKSLASEFFPDEYICDMLIRGWCVDGKLDEAQRLAG 834
            D DSLK+VV +LC  GFA YAEKMVK LA EFFPDE  CDMLIRGWC+DGKLDEAQRLAG
Sbjct: 201  DRDSLKVVVEKLCSEGFASYAEKMVKDLAREFFPDEATCDMLIRGWCIDGKLDEAQRLAG 260

Query: 835  EMYRGGFEIGTSAYNGILDCVCKLCRKKDPFRLQNEAEKVLLEMEEKGVPRDVETFNVLI 1014
            EMYRGGF++G  AYN +LDCVCKLCR+KDPF+L +EAEKVL+EME +GVPR+ ETFNVLI
Sbjct: 261  EMYRGGFDLGVGAYNAMLDCVCKLCREKDPFQLHSEAEKVLVEMEYRGVPRNTETFNVLI 320

Query: 1015 TNLCKIRKTEDALNLFYRMGE 1077
            TNLCKIRKTEDAL L + MGE
Sbjct: 321  TNLCKIRKTEDALGLLHSMGE 341



 Score = 98.6 bits (244), Expect(2) = e-127
 Identities = 43/56 (76%), Positives = 51/56 (91%)
 Frame = +2

Query: 1106 EMIDRMKSDGFGDALDKKAYYDFLKILCGIERIDHAMSIFAKMKEDGCKPGLKTYD 1273
            EMIDRM+S GFG+ LDKKAYY FLKILCGIER+DHA+S+FA MK+DGC+PG+ TYD
Sbjct: 369  EMIDRMRSAGFGEFLDKKAYYQFLKILCGIERVDHALSVFAMMKDDGCEPGVITYD 424


>gb|ESW16823.1| hypothetical protein PHAVU_007G187600g [Phaseolus vulgaris]
          Length = 505

 Score =  387 bits (993), Expect(2) = e-127
 Identities = 198/300 (66%), Positives = 228/300 (76%), Gaps = 3/300 (1%)
 Frame = +1

Query: 187  SFTLYSTSF---RSFSTQPNEETTTAQSLSSELVKELDAESLSIPQGLDLSFSHVXXXXX 357
            S TL+S S    R FS++   +   A SLSSEL+KELD++ LS+ Q L LSFSH+     
Sbjct: 40   SRTLFSPSLFLNRHFSSETQTDPI-ANSLSSELLKELDSDPLSVSQRLHLSFSHITPTPN 98

Query: 358  XXXXXXXXSPDAGRTVLGFFKWVKSKESFNLDDEVVSYFVDYFGRRKDFKSVNDVLSDGV 537
                    SP AGRTVLGF +W+ S   F   D  +SYFVDYFGRRKDFK+ +D+LS   
Sbjct: 99   LILQTLNLSPQAGRTVLGFHQWLSSNPQFTHTDHTLSYFVDYFGRRKDFKATHDLLSAAA 158

Query: 538  GLTGRKTLESMVDRLVRAGRPTQTVAFFENMEKDYGLVRDLDSLKLVVSRLCEHGFARYA 717
              +G KTLES +DRLVRAGRP+Q V FFE ME+DYGL RD  SLK+VV +LC  GFA YA
Sbjct: 159  AASGPKTLESAIDRLVRAGRPSQAVQFFERMERDYGLKRDRCSLKVVVEKLCSKGFASYA 218

Query: 718  EKMVKSLASEFFPDEYICDMLIRGWCVDGKLDEAQRLAGEMYRGGFEIGTSAYNGILDCV 897
            EKMVK LA EFFPDE  CD+LIRGWCVDGKL+EAQRLAGEMYRGGFE+G  AYN +LDCV
Sbjct: 219  EKMVKELAREFFPDEATCDLLIRGWCVDGKLEEAQRLAGEMYRGGFELGVGAYNAMLDCV 278

Query: 898  CKLCRKKDPFRLQNEAEKVLLEMEEKGVPRDVETFNVLITNLCKIRKTEDALNLFYRMGE 1077
            CKLCR+KD FRL +EAEKVL+EME +GVPR+VETFNVLITNLCKIRKTEDALNLF  MGE
Sbjct: 279  CKLCREKDLFRLDSEAEKVLVEMEYRGVPRNVETFNVLITNLCKIRKTEDALNLFSSMGE 338



 Score = 97.1 bits (240), Expect(2) = e-127
 Identities = 43/56 (76%), Positives = 50/56 (89%)
 Frame = +2

Query: 1106 EMIDRMKSDGFGDALDKKAYYDFLKILCGIERIDHAMSIFAKMKEDGCKPGLKTYD 1273
            EMIDRM+S G+G+ LDKKAYY FLKILCGIERIDHA+S+FA MK DGC PG++TYD
Sbjct: 366  EMIDRMRSAGYGEFLDKKAYYQFLKILCGIERIDHALSVFAMMKADGCVPGVQTYD 421


>ref|XP_004138218.1| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
            mitochondrial-like [Cucumis sativus]
            gi|449477122|ref|XP_004154936.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g60960,
            mitochondrial-like [Cucumis sativus]
          Length = 522

 Score =  375 bits (964), Expect(2) = e-126
 Identities = 184/300 (61%), Positives = 233/300 (77%), Gaps = 2/300 (0%)
 Frame = +1

Query: 184  FSFTLYSTSFRSFSTQP--NEETTTAQSLSSELVKELDAESLSIPQGLDLSFSHVXXXXX 357
            FS  LY +   SFS++   N    T+QSL+SEL+K+ D++ L I Q L LSFSHV     
Sbjct: 54   FSSPLYLSLSHSFSSESVNNHVDQTSQSLASELLKDPDSDPLPITQRLQLSFSHVKPNPE 113

Query: 358  XXXXXXXXSPDAGRTVLGFFKWVKSKESFNLDDEVVSYFVDYFGRRKDFKSVNDVLSDGV 537
                    S +AGRTVLGF +W+ S   F+  DE +SYFVD+FGRRKDF +V +VL+ G+
Sbjct: 114  LVRNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDFFGRRKDFNAVQEVLAKGL 173

Query: 538  GLTGRKTLESMVDRLVRAGRPTQTVAFFENMEKDYGLVRDLDSLKLVVSRLCEHGFARYA 717
            G+ G KTL+S + R  RAGRPT+ ++FFE ME +YGL RD +SL++VV +LCE+GF  +A
Sbjct: 174  GINGPKTLKSSIHRFARAGRPTKLISFFETMETNYGLKRDKESLRMVVEKLCENGFGSHA 233

Query: 718  EKMVKSLASEFFPDEYICDMLIRGWCVDGKLDEAQRLAGEMYRGGFEIGTSAYNGILDCV 897
            EKMVK LA+EFFPDE ICD LI+GWCV+ KLDEA+RLAGEMYRGGFE+GT+AYN +LDCV
Sbjct: 234  EKMVKDLANEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCV 293

Query: 898  CKLCRKKDPFRLQNEAEKVLLEMEEKGVPRDVETFNVLITNLCKIRKTEDALNLFYRMGE 1077
            CKLCRKKDPFRL +EAE++L+EM+ +GVPR+VETFNVLI NLCKIR+T DA+NLF+RMGE
Sbjct: 294  CKLCRKKDPFRLDSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRRTTDAVNLFHRMGE 353



 Score =  103 bits (257), Expect(2) = e-126
 Identities = 45/56 (80%), Positives = 53/56 (94%)
 Frame = +2

Query: 1106 EMIDRMKSDGFGDALDKKAYYDFLKILCGIERIDHAMSIFAKMKEDGCKPGLKTYD 1273
            EMIDRMKS G+GDALDKKAYY+F+ ILCGIERIDHA+ +FAKMK+DGC+PG+KTYD
Sbjct: 381  EMIDRMKSVGYGDALDKKAYYEFMNILCGIERIDHALVVFAKMKKDGCEPGIKTYD 436


>gb|EOY22114.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
            cacao]
          Length = 494

 Score =  376 bits (965), Expect(2) = e-123
 Identities = 185/288 (64%), Positives = 223/288 (77%)
 Frame = +1

Query: 214  RSFSTQPNEETTTAQSLSSELVKELDAESLSIPQGLDLSFSHVXXXXXXXXXXXXXSPDA 393
            + FSTQ  +    AQSLS+E++K  D + L I Q L LSFSH+             SP+A
Sbjct: 41   KPFSTQSPDPI--AQSLSTEILKNPDLDPLPITQRLQLSFSHIKPTSLLISQTLNLSPEA 98

Query: 394  GRTVLGFFKWVKSKESFNLDDEVVSYFVDYFGRRKDFKSVNDVLSDGVGLTGRKTLESMV 573
            GRTVLGF  W+ S  +FN  DE +S+F+DYFGRRKDFK+ +D+L +   + G KT ES V
Sbjct: 99   GRTVLGFNDWLLSDPNFNHTDETLSFFIDYFGRRKDFKAAHDLLVNNKSVAGPKTFESSV 158

Query: 574  DRLVRAGRPTQTVAFFENMEKDYGLVRDLDSLKLVVSRLCEHGFARYAEKMVKSLASEFF 753
            DRLVRAGRP Q + FFE M KDYG  RD +SL+L+V +LCE+G+A YAEKMVK+ A+E F
Sbjct: 159  DRLVRAGRPAQVLGFFEGMGKDYGFKRDKESLRLIVEKLCENGYASYAEKMVKNSANEIF 218

Query: 754  PDEYICDMLIRGWCVDGKLDEAQRLAGEMYRGGFEIGTSAYNGILDCVCKLCRKKDPFRL 933
            PDE ICD+LI+GWCVDGKL+EA+RLAGEMYRGGFEIGT AYN +LDCVCKLCRKKDPFRL
Sbjct: 219  PDEMICDLLIKGWCVDGKLEEAKRLAGEMYRGGFEIGTMAYNAMLDCVCKLCRKKDPFRL 278

Query: 934  QNEAEKVLLEMEEKGVPRDVETFNVLITNLCKIRKTEDALNLFYRMGE 1077
             +EAEKVLL+M+  GVPR+VETFNVL+ NLCKIRKTEDA+ LFYRMGE
Sbjct: 279  HSEAEKVLLDMDIYGVPRNVETFNVLMNNLCKIRKTEDAMKLFYRMGE 326



 Score = 95.1 bits (235), Expect(2) = e-123
 Identities = 41/56 (73%), Positives = 48/56 (85%)
 Frame = +2

Query: 1106 EMIDRMKSDGFGDALDKKAYYDFLKILCGIERIDHAMSIFAKMKEDGCKPGLKTYD 1273
            EMIDRMKS GFGD L +K YY FLKILCG+ER++HA+ +F KMK DGCKPG+KTYD
Sbjct: 354  EMIDRMKSAGFGDKLGEKEYYSFLKILCGVERVEHAIIVFKKMKADGCKPGIKTYD 409


>ref|XP_003556470.1| PREDICTED: pentatricopeptide repeat-containing protein PNM1,
            mitochondrial-like isoformX1 [Glycine max]
          Length = 509

 Score =  376 bits (965), Expect(2) = e-123
 Identities = 188/288 (65%), Positives = 221/288 (76%)
 Frame = +1

Query: 214  RSFSTQPNEETTTAQSLSSELVKELDAESLSIPQGLDLSFSHVXXXXXXXXXXXXXSPDA 393
            R FS++   +   A SLSSEL+KE D+++LS+ Q L LSFSH+             S ++
Sbjct: 56   RHFSSETQTDQI-AHSLSSELLKEPDSDALSVSQRLHLSFSHITPTPNLILQTLNLSHES 114

Query: 394  GRTVLGFFKWVKSKESFNLDDEVVSYFVDYFGRRKDFKSVNDVLSDGVGLTGRKTLESMV 573
            GRTVLGF +W+ S   F+  D+ +SYFVDYFGRRKDFK+ +DVLS      G KTL S +
Sbjct: 115  GRTVLGFHQWLSSNPQFSHTDDTLSYFVDYFGRRKDFKATHDVLSAASPAAGPKTLASAI 174

Query: 574  DRLVRAGRPTQTVAFFENMEKDYGLVRDLDSLKLVVSRLCEHGFARYAEKMVKSLASEFF 753
            DRLVRAGRP+Q V FFE ME+DYGL RD  SLK+VV +LC  GFA YAEKMVK LA  FF
Sbjct: 175  DRLVRAGRPSQAVQFFERMERDYGLKRDRASLKVVVEKLCSKGFASYAEKMVKDLAKVFF 234

Query: 754  PDEYICDMLIRGWCVDGKLDEAQRLAGEMYRGGFEIGTSAYNGILDCVCKLCRKKDPFRL 933
            PDE  CDMLI+GWCVDGKLDEAQRLAGEMYRGGFE+G  +YN +LDCVCKLCR+KDPF+L
Sbjct: 235  PDEATCDMLIKGWCVDGKLDEAQRLAGEMYRGGFELGVGSYNAMLDCVCKLCRQKDPFQL 294

Query: 934  QNEAEKVLLEMEEKGVPRDVETFNVLITNLCKIRKTEDALNLFYRMGE 1077
             +EAEKVL+EME +GVPR+VETFNVLITNLCKIRKTEDAL LF  MGE
Sbjct: 295  HSEAEKVLVEMEHRGVPRNVETFNVLITNLCKIRKTEDALGLFRSMGE 342



 Score = 94.7 bits (234), Expect(2) = e-123
 Identities = 42/56 (75%), Positives = 49/56 (87%)
 Frame = +2

Query: 1106 EMIDRMKSDGFGDALDKKAYYDFLKILCGIERIDHAMSIFAKMKEDGCKPGLKTYD 1273
            EMIDRM+S GFG+ LDKKAYY  LKILCGIER+DHA+S+FA MK+ GC+PGL TYD
Sbjct: 370  EMIDRMRSAGFGEFLDKKAYYQLLKILCGIERVDHALSVFAMMKDGGCEPGLITYD 425


>ref|XP_004301536.1| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
            mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 517

 Score =  363 bits (932), Expect(2) = e-122
 Identities = 185/323 (57%), Positives = 233/323 (72%)
 Frame = +1

Query: 109  ATNQSHHLPSSQQLFLSKPHLFTSPFSFTLYSTSFRSFSTQPNEETTTAQSLSSELVKEL 288
            +TN + H P+     ++  H  + P  F+L S  F S S++P      AQS+SS L+ + 
Sbjct: 36   STNPTRHAPNP----ITTSHFPSLP-RFSLTSKPFSSSSSEPQ----LAQSISSHLLHQP 86

Query: 289  DAESLSIPQGLDLSFSHVXXXXXXXXXXXXXSPDAGRTVLGFFKWVKSKESFNLDDEVVS 468
              E   + + L  SF +V             S +AGR VLGF +W+     F+  DE +S
Sbjct: 87   QPECADVTKTLQSSFPNVTPTPSLVLSVLNLSAEAGRAVLGFNQWLIHNPRFDHTDETLS 146

Query: 469  YFVDYFGRRKDFKSVNDVLSDGVGLTGRKTLESMVDRLVRAGRPTQTVAFFENMEKDYGL 648
            YFVDYFGRRKDFK+ +DV+     + G KTL + +DRLVRAGRP Q V+ FE ME++YG+
Sbjct: 147  YFVDYFGRRKDFKATHDVILSSRDVAGPKTLAASIDRLVRAGRPAQAVSMFEKMEEEYGI 206

Query: 649  VRDLDSLKLVVSRLCEHGFARYAEKMVKSLASEFFPDEYICDMLIRGWCVDGKLDEAQRL 828
             RD  +L+LVV +LCE+GFA  AEKMVK L +EFFPDEY+CD+LI+GWCVDGKLDEA+RL
Sbjct: 207  KRDKAALRLVVEKLCEYGFASNAEKMVKGLVNEFFPDEYMCDLLIKGWCVDGKLDEARRL 266

Query: 829  AGEMYRGGFEIGTSAYNGILDCVCKLCRKKDPFRLQNEAEKVLLEMEEKGVPRDVETFNV 1008
            AGEMYRGGFEIGTSA+N ILDCVCKLCRKKDPFRL +EAE++L++M+  GVPR+VETFNV
Sbjct: 267  AGEMYRGGFEIGTSAFNAILDCVCKLCRKKDPFRLHSEAEQILVDMDYHGVPRNVETFNV 326

Query: 1009 LITNLCKIRKTEDALNLFYRMGE 1077
            LITNLCKIRKT DALNLF+RMGE
Sbjct: 327  LITNLCKIRKTNDALNLFHRMGE 349



 Score =  104 bits (259), Expect(2) = e-122
 Identities = 46/56 (82%), Positives = 53/56 (94%)
 Frame = +2

Query: 1106 EMIDRMKSDGFGDALDKKAYYDFLKILCGIERIDHAMSIFAKMKEDGCKPGLKTYD 1273
            EMIDRMKS GFG+ALDKKAY+ FLKILCGIERIDHA+S+F KMK+DGC+PG+KTYD
Sbjct: 377  EMIDRMKSAGFGEALDKKAYFGFLKILCGIERIDHALSVFKKMKQDGCEPGIKTYD 432


>ref|XP_002514631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223546235|gb|EEF47737.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 569

 Score =  364 bits (934), Expect(2) = e-121
 Identities = 185/308 (60%), Positives = 234/308 (75%), Gaps = 10/308 (3%)
 Frame = +1

Query: 184  FSFTLYSTSFRSFSTQ---PN-----EETTTAQSLSSELVKELDAESLSIPQGLDLSFSH 339
            F+F   S S + FSTQ   PN     +    AQS+S+EL+K  +++SLSI Q L+L FSH
Sbjct: 94   FAFLPLSLS-KPFSTQTLNPNNNVLEDPNPIAQSISAELIKNPNSDSLSILQRLNLHFSH 152

Query: 340  VXXXXXXXXXXXXX--SPDAGRTVLGFFKWVKSKESFNLDDEVVSYFVDYFGRRKDFKSV 513
            +               SPDAGRTVLGF +W+    +F   DE +S+F+DYFGRRKDF+S 
Sbjct: 153  INNSITPSIILQTLNLSPDAGRTVLGFHQWLVKVANFKNTDETISFFIDYFGRRKDFQST 212

Query: 514  NDVLSDGVGLTGRKTLESMVDRLVRAGRPTQTVAFFENMEKDYGLVRDLDSLKLVVSRLC 693
            +++L D   + G K  ESMV+RLVRAGR T+ + FF+ ME+DYG  RD ++L+LVV  LC
Sbjct: 213  HELLCDSKDVIGYKCFESMVNRLVRAGRATKVMGFFDRMERDYGFKRDRENLRLVVKMLC 272

Query: 694  EHGFARYAEKMVKSLASEFFPDEYICDMLIRGWCVDGKLDEAQRLAGEMYRGGFEIGTSA 873
            ++G+A YAEKMVK+LA+E FPDE ICD+LI+GWCVDGKLDEA+RLAGEMYRGGFEIGT A
Sbjct: 273  DNGYASYAEKMVKNLANEIFPDENICDLLIKGWCVDGKLDEAKRLAGEMYRGGFEIGTVA 332

Query: 874  YNGILDCVCKLCRKKDPFRLQNEAEKVLLEMEEKGVPRDVETFNVLITNLCKIRKTEDAL 1053
            YN ILDCVCKLCR+KDPF++++E EKVL+EM+ +GVPR+VETFNVLITNLCK+RKT+DAL
Sbjct: 333  YNAILDCVCKLCREKDPFKIESEVEKVLVEMDTRGVPRNVETFNVLITNLCKMRKTQDAL 392

Query: 1054 NLFYRMGE 1077
            NLF RM E
Sbjct: 393  NLFNRMRE 400



 Score = 98.6 bits (244), Expect(2) = e-121
 Identities = 43/56 (76%), Positives = 50/56 (89%)
 Frame = +2

Query: 1106 EMIDRMKSDGFGDALDKKAYYDFLKILCGIERIDHAMSIFAKMKEDGCKPGLKTYD 1273
            EMIDRMKS G+G+ LDKKAYY FLKILCGIER++HA+S+F  MK DGCKPG+KTYD
Sbjct: 428  EMIDRMKSSGYGNKLDKKAYYGFLKILCGIERLEHAVSVFEMMKADGCKPGIKTYD 483


>ref|XP_002302931.1| predicted protein [Populus trichocarpa]
          Length = 516

 Score =  358 bits (919), Expect(2) = e-120
 Identities = 183/325 (56%), Positives = 234/325 (72%), Gaps = 10/325 (3%)
 Frame = +1

Query: 133  PSSQQLFLSKPHLFTSP-FSFTLYSTSFRSFST-QPNE----ETTTAQSLSSELVKELDA 294
            P +  L  +  HL  +P F F L    F S  T  PN     +    QSLS+E+ ++ + 
Sbjct: 23   PITFSLHSTPTHLPKTPAFPFCLSQRPFSSSQTLNPNAIESPDPAIVQSLSTEISRDPNT 82

Query: 295  ESLSIPQGLDLSFSHVXXXXXXXXXXXXX----SPDAGRTVLGFFKWVKSKESFNLDDEV 462
            + LSI + L LSFSH+                 SPDAGRTV+GF  W+    +F  +DE 
Sbjct: 83   DPLSISERLHLSFSHLTKNNALTPSLVLQTLKLSPDAGRTVIGFHNWLIKDANFEQNDES 142

Query: 463  VSYFVDYFGRRKDFKSVNDVLSDGVGLTGRKTLESMVDRLVRAGRPTQTVAFFENMEKDY 642
            ++ FVDYFGRRKDFK+ +D+L +G  + G K  ESM+DRLVRAGR TQ + FFE ME+DY
Sbjct: 143  LALFVDYFGRRKDFKAAHDLLVEGKSVAGVKCFESMIDRLVRAGRTTQVIGFFERMERDY 202

Query: 643  GLVRDLDSLKLVVSRLCEHGFARYAEKMVKSLASEFFPDEYICDMLIRGWCVDGKLDEAQ 822
            G  RD +SL  VV +LCE+G+A YAEKMVK+LA+E FPD+ ICD+LI+GWCVDGKL+EA+
Sbjct: 203  GFKRDKESLTFVVQKLCENGYASYAEKMVKNLANEIFPDDGICDLLIKGWCVDGKLEEAK 262

Query: 823  RLAGEMYRGGFEIGTSAYNGILDCVCKLCRKKDPFRLQNEAEKVLLEMEEKGVPRDVETF 1002
            RLAGEMYRGGFEIGT A+N +LDCVCKLCR+KDPFRL++E EKVL+EM+ +GVPR+VETF
Sbjct: 263  RLAGEMYRGGFEIGTMAFNAMLDCVCKLCREKDPFRLESEVEKVLMEMDIRGVPRNVETF 322

Query: 1003 NVLITNLCKIRKTEDALNLFYRMGE 1077
            NVLI+NLCK+R+TEDA+ LF R+GE
Sbjct: 323  NVLISNLCKVRRTEDAMKLFSRIGE 347



 Score =  101 bits (251), Expect(2) = e-120
 Identities = 45/56 (80%), Positives = 50/56 (89%)
 Frame = +2

Query: 1106 EMIDRMKSDGFGDALDKKAYYDFLKILCGIERIDHAMSIFAKMKEDGCKPGLKTYD 1273
            EMIDRMKS G+GD LDKKAYY FLKILCGIER++HAMS+F  MK DGCKPG+KTYD
Sbjct: 375  EMIDRMKSAGYGDKLDKKAYYGFLKILCGIERLEHAMSVFEMMKADGCKPGIKTYD 430


>ref|XP_006394550.1| hypothetical protein EUTSA_v10004006mg [Eutrema salsugineum]
            gi|557091189|gb|ESQ31836.1| hypothetical protein
            EUTSA_v10004006mg [Eutrema salsugineum]
          Length = 518

 Score =  355 bits (911), Expect(2) = e-117
 Identities = 184/333 (55%), Positives = 223/333 (66%), Gaps = 6/333 (1%)
 Frame = +1

Query: 97   ISSSATNQSHHLPSSQQLFLSKPHLFTSP------FSFTLYSTSFRSFSTQPNEETTTAQ 258
            +SSS+ N    L S  ++    P   T P      F +  +S+   +  ++  +    A 
Sbjct: 18   LSSSSVNS---LQSQSRIIFPNPSFSTPPPPRFSLFPYRFFSSETNAAESETLDSNQIAL 74

Query: 259  SLSSELVKELDAESLSIPQGLDLSFSHVXXXXXXXXXXXXXSPDAGRTVLGFFKWVKSKE 438
            S S EL    +AE  SI Q   LSFSH+             SP+AGR  LGF +W+ S  
Sbjct: 75   SFSKELTGNPEAEPQSISQSFQLSFSHITPNPDLILQTLNLSPEAGRAALGFNEWLDSNS 134

Query: 439  SFNLDDEVVSYFVDYFGRRKDFKSVNDVLSDGVGLTGRKTLESMVDRLVRAGRPTQTVAF 618
             F+  DE VS+FVDYFGRRKDF+ + +++S   G+ G KTLES +DRLVRAGRP Q V F
Sbjct: 135  GFSHTDETVSFFVDYFGRRKDFRGMQEIISKYKGVAGAKTLESAIDRLVRAGRPKQVVEF 194

Query: 619  FENMEKDYGLVRDLDSLKLVVSRLCEHGFARYAEKMVKSLASEFFPDEYICDMLIRGWCV 798
            FE ME DYGL RD +SL LVV +LCE G A +AEKMVKS A+E FPDE ICD+LI GWC 
Sbjct: 195  FEKMESDYGLKRDRESLTLVVKKLCEKGHASFAEKMVKSTANEIFPDENICDLLISGWCA 254

Query: 799  DGKLDEAQRLAGEMYRGGFEIGTSAYNGILDCVCKLCRKKDPFRLQNEAEKVLLEMEEKG 978
              KLD+A +LAGEM RGGFEIGT AYN ILDCVCKLCRKKDPFRLQ E +KVLLEME +G
Sbjct: 255  AEKLDDATKLAGEMSRGGFEIGTKAYNVILDCVCKLCRKKDPFRLQLEVDKVLLEMEYRG 314

Query: 979  VPRDVETFNVLITNLCKIRKTEDALNLFYRMGE 1077
            VPR+ +TFNVLI NLCKIR+TE+A+ LF RMGE
Sbjct: 315  VPRNTKTFNVLINNLCKIRRTEEAMKLFGRMGE 347



 Score = 96.7 bits (239), Expect(2) = e-117
 Identities = 42/56 (75%), Positives = 49/56 (87%)
 Frame = +2

Query: 1106 EMIDRMKSDGFGDALDKKAYYDFLKILCGIERIDHAMSIFAKMKEDGCKPGLKTYD 1273
            EMID+MKS G+G +LDKK YY FLKILCGIER++HAMS+F  MK DGCKPG+KTYD
Sbjct: 375  EMIDKMKSAGYGKSLDKKEYYGFLKILCGIERLEHAMSVFKNMKADGCKPGIKTYD 430


>ref|NP_200904.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75262710|sp|Q9FME4.1|PP438_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein PNM1,
            mitochondrial; AltName: Full=PPR PROTEIN LOCALIZED TO THE
            NUCLEUS AND MITOCHONDRIA 1; Flags: Precursor
            gi|10177319|dbj|BAB10645.1| unnamed protein product
            [Arabidopsis thaliana] gi|332010020|gb|AED97403.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            thaliana]
          Length = 521

 Score =  357 bits (917), Expect(2) = e-117
 Identities = 193/335 (57%), Positives = 231/335 (68%), Gaps = 8/335 (2%)
 Frame = +1

Query: 97   ISSSATNQSHHLPSSQQLFLSKPHLFTSPFSFTLYSTSF--RSFSTQPNEETTT------ 252
            ISSS+ N    L S  ++  SKP     P S +   ++F  R FS++ N E+ +      
Sbjct: 19   ISSSSVNT---LQSQPRIISSKPLFSPLPPSRSSIFSTFPSRFFSSETNAESESLDSNEI 75

Query: 253  AQSLSSELVKELDAESLSIPQGLDLSFSHVXXXXXXXXXXXXXSPDAGRTVLGFFKWVKS 432
            A S S EL    DAES +I Q  +LSFSH+             SP+AGR  LGF +W+ S
Sbjct: 76   ALSFSKELTGNPDAESQTISQRFNLSFSHITPNPDLILQTLNLSPEAGRAALGFNEWLDS 135

Query: 433  KESFNLDDEVVSYFVDYFGRRKDFKSVNDVLSDGVGLTGRKTLESMVDRLVRAGRPTQTV 612
              +F+  DE VS+FVDYFGRRKDFK + +++S   G+ G KTLES +DRLVRAGRP Q  
Sbjct: 136  NSNFSHTDETVSFFVDYFGRRKDFKGMLEIISKYKGIAGGKTLESAIDRLVRAGRPKQVT 195

Query: 613  AFFENMEKDYGLVRDLDSLKLVVSRLCEHGFARYAEKMVKSLASEFFPDEYICDMLIRGW 792
             FFE ME DYGL RD +SL LVV +LCE G A  AEKMVK+ A+E FPDE ICD+LI GW
Sbjct: 196  DFFEKMENDYGLKRDKESLTLVVKKLCEKGHASIAEKMVKNTANEIFPDENICDLLISGW 255

Query: 793  CVDGKLDEAQRLAGEMYRGGFEIGTSAYNGILDCVCKLCRKKDPFRLQNEAEKVLLEMEE 972
            C+  KLDEA RLAGEM RGGFEIGT AYN +LDCVCKLCRKKDPF+LQ E EKVLLEME 
Sbjct: 256  CIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEF 315

Query: 973  KGVPRDVETFNVLITNLCKIRKTEDALNLFYRMGE 1077
            +GVPR+ ETFNVLI NLCKIR+TE+A+ LF RMGE
Sbjct: 316  RGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGE 350



 Score = 93.2 bits (230), Expect(2) = e-117
 Identities = 40/56 (71%), Positives = 49/56 (87%)
 Frame = +2

Query: 1106 EMIDRMKSDGFGDALDKKAYYDFLKILCGIERIDHAMSIFAKMKEDGCKPGLKTYD 1273
            EMID+MKS G+G+ L+KK YY FLKILCGIER++HAMS+F  MK +GCKPG+KTYD
Sbjct: 378  EMIDKMKSAGYGELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYD 433


>gb|AAM63453.1| unknown [Arabidopsis thaliana]
          Length = 521

 Score =  356 bits (914), Expect(2) = e-117
 Identities = 193/335 (57%), Positives = 230/335 (68%), Gaps = 8/335 (2%)
 Frame = +1

Query: 97   ISSSATNQSHHLPSSQQLFLSKPHLFTSPFSFTLYSTSF--RSFSTQPNEETTT------ 252
            ISSS+ N    L S  ++  SKP     P S +   ++F  R FS++ N E+ +      
Sbjct: 19   ISSSSVNT---LQSQPRIISSKPLFSPLPPSRSSIFSTFPSRFFSSETNAESESLDSNEI 75

Query: 253  AQSLSSELVKELDAESLSIPQGLDLSFSHVXXXXXXXXXXXXXSPDAGRTVLGFFKWVKS 432
            A S S EL    DAES +I Q  +LSFSH+             SP+AGR  LGF +W+ S
Sbjct: 76   ALSFSKELTGNPDAESQTISQRFNLSFSHITPNPDLILQTLNLSPEAGRAALGFNEWLDS 135

Query: 433  KESFNLDDEVVSYFVDYFGRRKDFKSVNDVLSDGVGLTGRKTLESMVDRLVRAGRPTQTV 612
              +F+  DE VS+FVDYFGRRKDFK +  ++S   G+ G KTLES +DRLVRAGRP Q  
Sbjct: 136  NSNFSHTDETVSFFVDYFGRRKDFKGMLGIISKYKGIAGGKTLESAIDRLVRAGRPKQVT 195

Query: 613  AFFENMEKDYGLVRDLDSLKLVVSRLCEHGFARYAEKMVKSLASEFFPDEYICDMLIRGW 792
             FFE ME DYGL RD +SL LVV +LCE G A  AEKMVK+ A+E FPDE ICD+LI GW
Sbjct: 196  DFFEKMENDYGLKRDKESLTLVVKKLCEKGHASIAEKMVKNTANEIFPDENICDLLISGW 255

Query: 793  CVDGKLDEAQRLAGEMYRGGFEIGTSAYNGILDCVCKLCRKKDPFRLQNEAEKVLLEMEE 972
            C+  KLDEA RLAGEM RGGFEIGT AYN +LDCVCKLCRKKDPF+LQ E EKVLLEME 
Sbjct: 256  CIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEF 315

Query: 973  KGVPRDVETFNVLITNLCKIRKTEDALNLFYRMGE 1077
            +GVPR+ ETFNVLI NLCKIR+TE+A+ LF RMGE
Sbjct: 316  RGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGE 350



 Score = 93.2 bits (230), Expect(2) = e-117
 Identities = 40/56 (71%), Positives = 49/56 (87%)
 Frame = +2

Query: 1106 EMIDRMKSDGFGDALDKKAYYDFLKILCGIERIDHAMSIFAKMKEDGCKPGLKTYD 1273
            EMID+MKS G+G+ L+KK YY FLKILCGIER++HAMS+F  MK +GCKPG+KTYD
Sbjct: 378  EMIDKMKSAGYGELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYD 433


>ref|XP_002866406.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297312241|gb|EFH42665.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 522

 Score =  355 bits (911), Expect(2) = e-116
 Identities = 190/332 (57%), Positives = 228/332 (68%), Gaps = 8/332 (2%)
 Frame = +1

Query: 106  SATNQSHHLPSSQQLFLSKPHLFTSPFSFTLYSTSF--RSFSTQPNEETTT------AQS 261
            S+++  + L +  +L  SKP     P S +   ++F  R FS++ N E+ T      A S
Sbjct: 20   SSSSSVNTLQAQSRLISSKPSFSPLPPSRSSTFSTFPSRLFSSETNAESETLDSNEIALS 79

Query: 262  LSSELVKELDAESLSIPQGLDLSFSHVXXXXXXXXXXXXXSPDAGRTVLGFFKWVKSKES 441
             S EL    DAES +I Q  +LSFSH+             SP+AGR  LGF +W+ S  +
Sbjct: 80   FSKELTGNPDAESHAISQRFNLSFSHITPNPDLILQTLNLSPEAGRAALGFNEWLDSNSN 139

Query: 442  FNLDDEVVSYFVDYFGRRKDFKSVNDVLSDGVGLTGRKTLESMVDRLVRAGRPTQTVAFF 621
            F+  DE VS+FVDYFGRRKDFK + +++S   G+ G KTLES +DRLVRA RP Q  AFF
Sbjct: 140  FSHTDETVSFFVDYFGRRKDFKGMLEIISKYKGIAGAKTLESAIDRLVRADRPKQVAAFF 199

Query: 622  ENMEKDYGLVRDLDSLKLVVSRLCEHGFARYAEKMVKSLASEFFPDEYICDMLIRGWCVD 801
            E ME DYGL RD DSL LVV +LCE   A  AEKMVK+ A++ FPDE ICD+LI GWC  
Sbjct: 200  EKMENDYGLKRDRDSLTLVVKKLCEKRHASIAEKMVKNTANDIFPDENICDLLISGWCTA 259

Query: 802  GKLDEAQRLAGEMYRGGFEIGTSAYNGILDCVCKLCRKKDPFRLQNEAEKVLLEMEEKGV 981
             KLDEA RLAGEM RGGFEIGT AYN ILDCVCKLCRKKDPF+LQ E EKVLLEME +GV
Sbjct: 260  EKLDEATRLAGEMSRGGFEIGTKAYNMILDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGV 319

Query: 982  PRDVETFNVLITNLCKIRKTEDALNLFYRMGE 1077
            PR+ ETFNVLI NLCKIR+TE+A+ LF RMGE
Sbjct: 320  PRNTETFNVLINNLCKIRRTEEAMTLFARMGE 351



 Score = 92.8 bits (229), Expect(2) = e-116
 Identities = 40/56 (71%), Positives = 49/56 (87%)
 Frame = +2

Query: 1106 EMIDRMKSDGFGDALDKKAYYDFLKILCGIERIDHAMSIFAKMKEDGCKPGLKTYD 1273
            EMID+MKS G+G+ L+KK YY FLKILCGIER++HAMS+F  MK +GCKPG+KTYD
Sbjct: 379  EMIDKMKSAGYGEFLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYD 434


>ref|XP_006440794.1| hypothetical protein CICLE_v10019809mg [Citrus clementina]
            gi|557543056|gb|ESR54034.1| hypothetical protein
            CICLE_v10019809mg [Citrus clementina]
          Length = 503

 Score =  375 bits (962), Expect(2) = e-116
 Identities = 192/326 (58%), Positives = 235/326 (72%), Gaps = 16/326 (4%)
 Frame = +1

Query: 148  LFLSKPHLFTSPFS--FTLYSTSF------RSFSTQPNEETTT--------AQSLSSELV 279
            L   +PH F SP S  F+ +S +       + FS++P     T        A+SLS EL+
Sbjct: 13   LLQQRPHRFISPQSTYFSRFSPTHYLNFLSKPFSSKPTSNPKTIDDPDQVIARSLSGELL 72

Query: 280  KELDAESLSIPQGLDLSFSHVXXXXXXXXXXXXXSPDAGRTVLGFFKWVKSKESFNLDDE 459
            + L+A+ L I Q L L FSHV             SP+AGR +LGF  W+    +F+  DE
Sbjct: 73   ENLEADPLPISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDE 132

Query: 460  VVSYFVDYFGRRKDFKSVNDVLSDGVGLTGRKTLESMVDRLVRAGRPTQTVAFFENMEKD 639
             +S+F DYFGRRKDFK+++D L D   + G KTL S +DRLVRAGRPTQ + FFE ME+D
Sbjct: 133  TLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERD 192

Query: 640  YGLVRDLDSLKLVVSRLCEHGFARYAEKMVKSLASEFFPDEYICDMLIRGWCVDGKLDEA 819
            YG  RD DSL+LVV +LCE+G+A YAEK+VK  A+E FPD+ ICD+LI+GWCVDGKLDEA
Sbjct: 193  YGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEA 252

Query: 820  QRLAGEMYRGGFEIGTSAYNGILDCVCKLCRKKDPFRLQNEAEKVLLEMEEKGVPRDVET 999
            +RLAGEMYRGGFE+GT AYN ILDCV KLCRKKDPFRL +EAEKVLL+ME  GVPR+VET
Sbjct: 253  KRLAGEMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLDMEYNGVPRNVET 312

Query: 1000 FNVLITNLCKIRKTEDALNLFYRMGE 1077
            FNVLI+NLCKIR+TEDA+ LFYRMGE
Sbjct: 313  FNVLISNLCKIRRTEDAVKLFYRMGE 338



 Score = 71.6 bits (174), Expect(2) = e-116
 Identities = 36/56 (64%), Positives = 42/56 (75%)
 Frame = +2

Query: 1106 EMIDRMKSDGFGDALDKKAYYDFLKILCGIERIDHAMSIFAKMKEDGCKPGLKTYD 1273
            EMIDRMKS G+  A+ KK YY+FL  LCGIERI+ AMS+F KMK DG  P  +TYD
Sbjct: 366  EMIDRMKSAGY--AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDSETYD 419


>gb|EMJ11126.1| hypothetical protein PRUPE_ppa004540mg [Prunus persica]
          Length = 504

 Score =  342 bits (878), Expect(2) = e-115
 Identities = 186/337 (55%), Positives = 233/337 (69%), Gaps = 11/337 (3%)
 Frame = +1

Query: 100  SSSATNQSHHLPSSQQ---LFLSKPHLFT---SPFSFTLYSTSFRSFST-----QPNEET 246
            SSS T Q+H L  S++      ++P + T   S F   L+ +  + FS+     Q ++++
Sbjct: 25   SSSPTIQTHILFHSRKPTHFHYAQPAITTTASSHFLSLLHFSVSKPFSSSTLPAQDSDQS 84

Query: 247  TTAQSLSSELVKELDAESLSIPQGLDLSFSHVXXXXXXXXXXXXXSPDAGRTVLGFFKWV 426
              AQSLSSEL+ +  ++ LS+ Q L LSFSH+             SPDAGR V+G     
Sbjct: 85   QLAQSLSSELLIDPSSDPLSVTQRLQLSFSHITPTPSLVQSVLNLSPDAGRAVIG----- 139

Query: 427  KSKESFNLDDEVVSYFVDYFGRRKDFKSVNDVLSDGVGLTGRKTLESMVDRLVRAGRPTQ 606
                                  RKDFK+ +DV+    G+ G KT  S +DRLVRAGRP Q
Sbjct: 140  ----------------------RKDFKATHDVIVSAGGVAGPKTFASSIDRLVRAGRPAQ 177

Query: 607  TVAFFENMEKDYGLVRDLDSLKLVVSRLCEHGFARYAEKMVKSLASEFFPDEYICDMLIR 786
             V+FFE MEKDYGL RD  SL+LVV +LCE+GFA  AEKMVKSLA+EFFPDEYICD+LI+
Sbjct: 178  AVSFFERMEKDYGLKRDKTSLRLVVEKLCENGFASNAEKMVKSLANEFFPDEYICDLLIK 237

Query: 787  GWCVDGKLDEAQRLAGEMYRGGFEIGTSAYNGILDCVCKLCRKKDPFRLQNEAEKVLLEM 966
            GWC+DGKL+EA+RLAGEMYRGGFEIGT+AYN ILDCV KLCRKKDPFRL +EAE++L++M
Sbjct: 238  GWCIDGKLEEARRLAGEMYRGGFEIGTTAYNAILDCVSKLCRKKDPFRLHSEAEQILVDM 297

Query: 967  EEKGVPRDVETFNVLITNLCKIRKTEDALNLFYRMGE 1077
            +  GVPR+VETFNVLI+NLCK+RKTEDALNLF+RMGE
Sbjct: 298  DTHGVPRNVETFNVLISNLCKLRKTEDALNLFHRMGE 334



 Score =  102 bits (255), Expect(2) = e-115
 Identities = 46/56 (82%), Positives = 51/56 (91%)
 Frame = +2

Query: 1106 EMIDRMKSDGFGDALDKKAYYDFLKILCGIERIDHAMSIFAKMKEDGCKPGLKTYD 1273
            EMIDRMKS GFG ALDKKAYY F+KILCGIERIDHAM +F KMKEDGC+PG+K+YD
Sbjct: 362  EMIDRMKSAGFGGALDKKAYYGFMKILCGIERIDHAMRVFKKMKEDGCEPGIKSYD 417


>ref|XP_006282075.1| hypothetical protein CARUB_v10028321mg [Capsella rubella]
            gi|482550779|gb|EOA14973.1| hypothetical protein
            CARUB_v10028321mg [Capsella rubella]
          Length = 522

 Score =  358 bits (918), Expect(2) = e-115
 Identities = 190/316 (60%), Positives = 221/316 (69%), Gaps = 1/316 (0%)
 Frame = +1

Query: 133  PSSQQLFLSKPHLF-TSPFSFTLYSTSFRSFSTQPNEETTTAQSLSSELVKELDAESLSI 309
            PS   L  S+P +F T P  F    T+  S S+ PN+    A S S EL    +AES SI
Sbjct: 39   PSFSPLPPSRPSIFSTFPCRFFSSETNADSESSDPNQ---IALSFSKELTGNPEAESHSI 95

Query: 310  PQGLDLSFSHVXXXXXXXXXXXXXSPDAGRTVLGFFKWVKSKESFNLDDEVVSYFVDYFG 489
             Q  +LSFSH+             SP+AGR  LGF +W+ S   F+  DE VSYFVDYFG
Sbjct: 96   SQRFNLSFSHITPNPDLILQTLNLSPEAGRAALGFNEWLDSSNGFSHTDETVSYFVDYFG 155

Query: 490  RRKDFKSVNDVLSDGVGLTGRKTLESMVDRLVRAGRPTQTVAFFENMEKDYGLVRDLDSL 669
            RRKDFK + +++S   G++G KTLES +DRLVRAGRP Q   FFE ME DYGL RD +SL
Sbjct: 156  RRKDFKGMLEIISKYKGISGAKTLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESL 215

Query: 670  KLVVSRLCEHGFARYAEKMVKSLASEFFPDEYICDMLIRGWCVDGKLDEAQRLAGEMYRG 849
             LVV +LCE G A  AEKMVK+ A++ FPDE ICD+LI GWC   KLDEA RLAGEM RG
Sbjct: 216  TLVVKKLCEKGHASIAEKMVKNTANDIFPDENICDLLISGWCTAEKLDEATRLAGEMSRG 275

Query: 850  GFEIGTSAYNGILDCVCKLCRKKDPFRLQNEAEKVLLEMEEKGVPRDVETFNVLITNLCK 1029
            GFEIGT AYN ILDCVCKLCRKKDPF+LQ E EKVLLEME +GVPR+ ETFNVLI NLCK
Sbjct: 276  GFEIGTKAYNMILDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCK 335

Query: 1030 IRKTEDALNLFYRMGE 1077
            IR+TE+A+ LF RMGE
Sbjct: 336  IRRTEEAMTLFGRMGE 351



 Score = 87.0 bits (214), Expect(2) = e-115
 Identities = 38/56 (67%), Positives = 47/56 (83%)
 Frame = +2

Query: 1106 EMIDRMKSDGFGDALDKKAYYDFLKILCGIERIDHAMSIFAKMKEDGCKPGLKTYD 1273
            EMID+MKS G+ ++L KK YY FLKILCGIER++HAMS+F  MK +G KPG+KTYD
Sbjct: 379  EMIDKMKSAGYSESLTKKEYYGFLKILCGIERLEHAMSVFKNMKANGIKPGIKTYD 434


>ref|XP_006477702.1| PREDICTED: pentatricopeptide repeat-containing protein PNM1,
            mitochondrial-like [Citrus sinensis]
          Length = 503

 Score =  370 bits (951), Expect(2) = e-115
 Identities = 193/338 (57%), Positives = 238/338 (70%), Gaps = 22/338 (6%)
 Frame = +1

Query: 130  LPSSQQLFLSK------PHLFTSPFS--FTLYSTSF------RSFSTQPNEETTT----- 252
            +P S  L L +      PH F SP S  F+ +S +       + FS++P     T     
Sbjct: 1    MPPSTSLLLGRLLLQQPPHRFISPQSTYFSRFSPTHYLNFLSKPFSSKPTSNPKTIDDPD 60

Query: 253  ---AQSLSSELVKELDAESLSIPQGLDLSFSHVXXXXXXXXXXXXXSPDAGRTVLGFFKW 423
               A+SLS EL++ L+A+ L I Q L L FSHV             SP+AGR +LGF  W
Sbjct: 61   QVIARSLSGELLENLEADPLPISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHW 120

Query: 424  VKSKESFNLDDEVVSYFVDYFGRRKDFKSVNDVLSDGVGLTGRKTLESMVDRLVRAGRPT 603
            +    +F+  DE +S+F DYFGRRKDFK+++D L D   + G KTL S +DRLVRAGRPT
Sbjct: 121  LTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPT 180

Query: 604  QTVAFFENMEKDYGLVRDLDSLKLVVSRLCEHGFARYAEKMVKSLASEFFPDEYICDMLI 783
            Q + FFE ME+DYG  RD DSL+LVV +LCE+G+A YAEK+VK  A+E FPD+ ICD+LI
Sbjct: 181  QVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLI 240

Query: 784  RGWCVDGKLDEAQRLAGEMYRGGFEIGTSAYNGILDCVCKLCRKKDPFRLQNEAEKVLLE 963
            +GWCVDGKLDEA+RLA EMYRGGFE+GT AYN ILDCV KLCRKKDPFRL +EAEKVLL+
Sbjct: 241  KGWCVDGKLDEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEAEKVLLD 300

Query: 964  MEEKGVPRDVETFNVLITNLCKIRKTEDALNLFYRMGE 1077
            ME  GVPR+VETFNVLI+NLCKIR++EDA+ LFYRMGE
Sbjct: 301  MEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGE 338



 Score = 72.0 bits (175), Expect(2) = e-115
 Identities = 36/56 (64%), Positives = 42/56 (75%)
 Frame = +2

Query: 1106 EMIDRMKSDGFGDALDKKAYYDFLKILCGIERIDHAMSIFAKMKEDGCKPGLKTYD 1273
            EMIDRMKS G+  A+ KK YY+FL  LCGIERI+ AMS+F KMK DG  P  +TYD
Sbjct: 366  EMIDRMKSAGY--AIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPDTETYD 419