BLASTX nr result

ID: Atropa21_contig00002354 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00002354
         (538 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001233985.1| histone H1 [Solanum lycopersicum] gi|3021487...   123   3e-26
ref|XP_006352751.1| PREDICTED: histone H1-like [Solanum tuberosum]    122   7e-26
gb|AAC41651.1| histone H1 [Nicotiana tabacum]                         119   3e-25
dbj|BAA88671.1| histone H1 [Nicotiana tabacum]                        119   3e-25
ref|XP_006351636.1| PREDICTED: histone H1-like [Solanum tuberosum]    108   6e-22
ref|XP_004247225.1| PREDICTED: histone H1-like [Solanum lycopers...   108   1e-21
gb|EXB81317.1| Histone [Morus notabilis]                              106   3e-21
gb|EOY11039.1| Winged-helix DNA-binding transcription factor fam...   106   4e-21
sp|Q9M5W4.1|H1_EUPES RecName: Full=Histone H1 gi|6752901|gb|AAF2...   104   1e-20
gb|AAP31307.1| histone H1 [Lens nigricans]                            103   2e-20
gb|AAM54670.1|AF514416_1 histone H1 [Lathyrus aphaca]                 103   2e-20
gb|AAK29456.1|AF352253_1 histone H1 [Lens culinaris]                  103   2e-20
gb|AAK29455.1|AF352252_1 histone H1 [Lens culinaris]                  103   2e-20
gb|AAK29454.1|AF352251_1 histone H1 [Lens culinaris]                  103   2e-20
gb|EOX94551.1| Winged-helix DNA-binding transcription factor fam...   103   3e-20
ref|XP_002531272.1| histone h1/h5, putative [Ricinus communis] g...   103   3e-20
gb|AAK29452.1|AF352249_1 histone H1 [Lathyrus sativus]                103   3e-20
gb|AAK29453.1|AF352250_1 histone H1 [Lathyrus sativus]                103   3e-20
ref|XP_006383690.1| Histone H1 family protein [Populus trichocar...   102   4e-20
emb|CBI35178.3| unnamed protein product [Vitis vinifera]              102   4e-20

>ref|NP_001233985.1| histone H1 [Solanum lycopersicum] gi|3021487|emb|CAA12232.1|
           histone H1 [Solanum lycopersicum]
          Length = 271

 Score =  123 bits (308), Expect = 3e-26
 Identities = 62/66 (93%), Positives = 65/66 (98%)
 Frame = -3

Query: 536 YFEMIQEAIVTLKDKTGSSQYAITKFIEDKQKNLPSNFRKLLLGQLKKLVASGKLVKVKS 357
           YFEMI+EAIVTLKDKTGSSQYAITKFIEDKQKNLPSNFRK+LL QLKKLVASGKLVKVKS
Sbjct: 60  YFEMIKEAIVTLKDKTGSSQYAITKFIEDKQKNLPSNFRKMLLAQLKKLVASGKLVKVKS 119

Query: 356 SYKLPS 339
           SYKLP+
Sbjct: 120 SYKLPA 125


>ref|XP_006352751.1| PREDICTED: histone H1-like [Solanum tuberosum]
          Length = 273

 Score =  122 bits (305), Expect = 7e-26
 Identities = 62/66 (93%), Positives = 65/66 (98%)
 Frame = -3

Query: 536 YFEMIQEAIVTLKDKTGSSQYAITKFIEDKQKNLPSNFRKLLLGQLKKLVASGKLVKVKS 357
           YFEMI+EAIVTLKDKTGSSQYAITKFIEDKQKNLPSNFRK+LL QLKKLVASGKLVKVKS
Sbjct: 60  YFEMIKEAIVTLKDKTGSSQYAITKFIEDKQKNLPSNFRKMLLVQLKKLVASGKLVKVKS 119

Query: 356 SYKLPS 339
           SYKLP+
Sbjct: 120 SYKLPA 125


>gb|AAC41651.1| histone H1 [Nicotiana tabacum]
          Length = 282

 Score =  119 bits (299), Expect = 3e-25
 Identities = 61/66 (92%), Positives = 65/66 (98%)
 Frame = -3

Query: 536 YFEMIQEAIVTLKDKTGSSQYAITKFIEDKQKNLPSNFRKLLLGQLKKLVASGKLVKVKS 357
           YFEMI++AIVTLKDKTGSSQ+AITKFIEDKQKNLPSNFRKLLL QLKKLVASGKLVKVKS
Sbjct: 62  YFEMIKDAIVTLKDKTGSSQHAITKFIEDKQKNLPSNFRKLLLVQLKKLVASGKLVKVKS 121

Query: 356 SYKLPS 339
           SYKLP+
Sbjct: 122 SYKLPA 127


>dbj|BAA88671.1| histone H1 [Nicotiana tabacum]
          Length = 279

 Score =  119 bits (299), Expect = 3e-25
 Identities = 61/66 (92%), Positives = 65/66 (98%)
 Frame = -3

Query: 536 YFEMIQEAIVTLKDKTGSSQYAITKFIEDKQKNLPSNFRKLLLGQLKKLVASGKLVKVKS 357
           YFEMI++AIVTLKDKTGSSQ+AITKFIEDKQKNLPSNFRKLLL QLKKLVASGKLVKVKS
Sbjct: 62  YFEMIKDAIVTLKDKTGSSQHAITKFIEDKQKNLPSNFRKLLLVQLKKLVASGKLVKVKS 121

Query: 356 SYKLPS 339
           SYKLP+
Sbjct: 122 SYKLPA 127


>ref|XP_006351636.1| PREDICTED: histone H1-like [Solanum tuberosum]
          Length = 283

 Score =  108 bits (271), Expect = 6e-22
 Identities = 55/66 (83%), Positives = 62/66 (93%)
 Frame = -3

Query: 536 YFEMIQEAIVTLKDKTGSSQYAITKFIEDKQKNLPSNFRKLLLGQLKKLVASGKLVKVKS 357
           YFEMI++AIVTLK++TGSSQYAITKFIE+KQKNLPSNF+K LL QLKK VAS KLVKVK+
Sbjct: 59  YFEMIKDAIVTLKERTGSSQYAITKFIEEKQKNLPSNFKKSLLIQLKKFVASEKLVKVKN 118

Query: 356 SYKLPS 339
           SYKLPS
Sbjct: 119 SYKLPS 124


>ref|XP_004247225.1| PREDICTED: histone H1-like [Solanum lycopersicum]
           gi|585241|sp|P37218.1|H1_SOLLC RecName: Full=Histone H1
           gi|424100|gb|AAA50578.1| histone H1 [Solanum
           lycopersicum]
          Length = 287

 Score =  108 bits (269), Expect = 1e-21
 Identities = 54/66 (81%), Positives = 63/66 (95%)
 Frame = -3

Query: 536 YFEMIQEAIVTLKDKTGSSQYAITKFIEDKQKNLPSNFRKLLLGQLKKLVASGKLVKVKS 357
           YFEMI++AIVTLK++TGSSQ+AITKFIE+KQK+LPSNF+KLLL QLKK VAS KLVKVK+
Sbjct: 59  YFEMIKDAIVTLKERTGSSQHAITKFIEEKQKSLPSNFKKLLLTQLKKFVASEKLVKVKN 118

Query: 356 SYKLPS 339
           SYKLPS
Sbjct: 119 SYKLPS 124


>gb|EXB81317.1| Histone [Morus notabilis]
          Length = 283

 Score =  106 bits (265), Expect = 3e-21
 Identities = 53/66 (80%), Positives = 61/66 (92%)
 Frame = -3

Query: 536 YFEMIQEAIVTLKDKTGSSQYAITKFIEDKQKNLPSNFRKLLLGQLKKLVASGKLVKVKS 357
           Y EMI++AIVTLK+KTGSSQ+AITKFIE+KQKNLP NFRKLLL  LKKLVA+GK++KVK 
Sbjct: 61  YEEMIKDAIVTLKEKTGSSQHAITKFIEEKQKNLPPNFRKLLLFHLKKLVAAGKIIKVKG 120

Query: 356 SYKLPS 339
           SYKLPS
Sbjct: 121 SYKLPS 126


>gb|EOY11039.1| Winged-helix DNA-binding transcription factor family protein
           [Theobroma cacao]
          Length = 212

 Score =  106 bits (264), Expect = 4e-21
 Identities = 53/65 (81%), Positives = 59/65 (90%)
 Frame = -3

Query: 536 YFEMIQEAIVTLKDKTGSSQYAITKFIEDKQKNLPSNFRKLLLGQLKKLVASGKLVKVKS 357
           + EMI +AIVTLK+KTGSSQYAITKFIE+K K LPSNFRKLLL Q+KK VASGKLVKVK+
Sbjct: 32  FLEMISDAIVTLKEKTGSSQYAITKFIEEKHKQLPSNFRKLLLVQMKKFVASGKLVKVKA 91

Query: 356 SYKLP 342
           SYKLP
Sbjct: 92  SYKLP 96


>sp|Q9M5W4.1|H1_EUPES RecName: Full=Histone H1 gi|6752901|gb|AAF27930.1|AF222804_1
           histone H1 [Euphorbia esula]
          Length = 229

 Score =  104 bits (260), Expect = 1e-20
 Identities = 52/66 (78%), Positives = 59/66 (89%)
 Frame = -3

Query: 536 YFEMIQEAIVTLKDKTGSSQYAITKFIEDKQKNLPSNFRKLLLGQLKKLVASGKLVKVKS 357
           +FEMI +AI TLK++TGSSQYAI KF+EDK K LPSNFRKLLL  LKKLVASGKLVKVK+
Sbjct: 54  FFEMISDAISTLKERTGSSQYAINKFVEDKHKQLPSNFRKLLLFHLKKLVASGKLVKVKN 113

Query: 356 SYKLPS 339
           S+KLPS
Sbjct: 114 SFKLPS 119


>gb|AAP31307.1| histone H1 [Lens nigricans]
          Length = 293

 Score =  103 bits (258), Expect = 2e-20
 Identities = 51/66 (77%), Positives = 61/66 (92%)
 Frame = -3

Query: 536 YFEMIQEAIVTLKDKTGSSQYAITKFIEDKQKNLPSNFRKLLLGQLKKLVASGKLVKVKS 357
           Y EM+++AIV+LK+K GSSQYAI KFIE+KQK LPSNF+KLLL Q+KKLVASGKLVKVK+
Sbjct: 59  YEEMVKDAIVSLKEKNGSSQYAIAKFIEEKQKQLPSNFKKLLLVQIKKLVASGKLVKVKA 118

Query: 356 SYKLPS 339
           SYKLP+
Sbjct: 119 SYKLPA 124


>gb|AAM54670.1|AF514416_1 histone H1 [Lathyrus aphaca]
          Length = 298

 Score =  103 bits (258), Expect = 2e-20
 Identities = 52/66 (78%), Positives = 60/66 (90%)
 Frame = -3

Query: 536 YFEMIQEAIVTLKDKTGSSQYAITKFIEDKQKNLPSNFRKLLLGQLKKLVASGKLVKVKS 357
           Y EM++EAIV LK+K+GSSQYAI KFIE+K K LPSNF+KLLL QLKKLVASGKLVKVK+
Sbjct: 62  YEEMVKEAIVALKEKSGSSQYAIAKFIEEKHKQLPSNFKKLLLVQLKKLVASGKLVKVKA 121

Query: 356 SYKLPS 339
           SYKLP+
Sbjct: 122 SYKLPA 127


>gb|AAK29456.1|AF352253_1 histone H1 [Lens culinaris]
          Length = 293

 Score =  103 bits (258), Expect = 2e-20
 Identities = 51/66 (77%), Positives = 61/66 (92%)
 Frame = -3

Query: 536 YFEMIQEAIVTLKDKTGSSQYAITKFIEDKQKNLPSNFRKLLLGQLKKLVASGKLVKVKS 357
           Y EM+++AIV+LK+K GSSQYAI KFIE+KQK LPSNF+KLLL Q+KKLVASGKLVKVK+
Sbjct: 59  YEEMVKDAIVSLKEKNGSSQYAIAKFIEEKQKQLPSNFKKLLLVQIKKLVASGKLVKVKA 118

Query: 356 SYKLPS 339
           SYKLP+
Sbjct: 119 SYKLPA 124


>gb|AAK29455.1|AF352252_1 histone H1 [Lens culinaris]
          Length = 293

 Score =  103 bits (258), Expect = 2e-20
 Identities = 51/66 (77%), Positives = 61/66 (92%)
 Frame = -3

Query: 536 YFEMIQEAIVTLKDKTGSSQYAITKFIEDKQKNLPSNFRKLLLGQLKKLVASGKLVKVKS 357
           Y EM+++AIV+LK+K GSSQYAI KFIE+KQK LPSNF+KLLL Q+KKLVASGKLVKVK+
Sbjct: 59  YEEMVKDAIVSLKEKNGSSQYAIAKFIEEKQKQLPSNFKKLLLVQIKKLVASGKLVKVKA 118

Query: 356 SYKLPS 339
           SYKLP+
Sbjct: 119 SYKLPA 124


>gb|AAK29454.1|AF352251_1 histone H1 [Lens culinaris]
          Length = 281

 Score =  103 bits (258), Expect = 2e-20
 Identities = 51/66 (77%), Positives = 61/66 (92%)
 Frame = -3

Query: 536 YFEMIQEAIVTLKDKTGSSQYAITKFIEDKQKNLPSNFRKLLLGQLKKLVASGKLVKVKS 357
           Y EM+++AIV+LK+K GSSQYAI KFIE+KQK LPSNF+KLLL Q+KKLVASGKLVKVK+
Sbjct: 59  YEEMVKDAIVSLKEKNGSSQYAIAKFIEEKQKQLPSNFKKLLLVQIKKLVASGKLVKVKA 118

Query: 356 SYKLPS 339
           SYKLP+
Sbjct: 119 SYKLPA 124


>gb|EOX94551.1| Winged-helix DNA-binding transcription factor family protein
           [Theobroma cacao]
          Length = 284

 Score =  103 bits (256), Expect = 3e-20
 Identities = 51/66 (77%), Positives = 61/66 (92%)
 Frame = -3

Query: 536 YFEMIQEAIVTLKDKTGSSQYAITKFIEDKQKNLPSNFRKLLLGQLKKLVASGKLVKVKS 357
           Y EMI++A+VTLK+KTGSSQYAITKFIE+KQK+LP  F+KLLL  LKKLVA+GKLVKVK+
Sbjct: 59  YEEMIKDAVVTLKEKTGSSQYAITKFIEEKQKHLPGTFKKLLLFHLKKLVAAGKLVKVKN 118

Query: 356 SYKLPS 339
           S+KLPS
Sbjct: 119 SFKLPS 124


>ref|XP_002531272.1| histone h1/h5, putative [Ricinus communis]
           gi|223529105|gb|EEF31085.1| histone h1/h5, putative
           [Ricinus communis]
          Length = 232

 Score =  103 bits (256), Expect = 3e-20
 Identities = 51/66 (77%), Positives = 59/66 (89%)
 Frame = -3

Query: 536 YFEMIQEAIVTLKDKTGSSQYAITKFIEDKQKNLPSNFRKLLLGQLKKLVASGKLVKVKS 357
           + EMI +AIVTLK++TGSSQYAITKF+E+K K LP NFRKLLL  LKKLVASGKLVKVK+
Sbjct: 55  FLEMINDAIVTLKERTGSSQYAITKFVEEKHKKLPPNFRKLLLFHLKKLVASGKLVKVKN 114

Query: 356 SYKLPS 339
           S+KLPS
Sbjct: 115 SFKLPS 120


>gb|AAK29452.1|AF352249_1 histone H1 [Lathyrus sativus]
          Length = 295

 Score =  103 bits (256), Expect = 3e-20
 Identities = 51/66 (77%), Positives = 60/66 (90%)
 Frame = -3

Query: 536 YFEMIQEAIVTLKDKTGSSQYAITKFIEDKQKNLPSNFRKLLLGQLKKLVASGKLVKVKS 357
           Y EM++EAIV LK+K+GSSQYAI KFIE+K K LPSNF+KLLL Q+KKLVASGKLVKVK+
Sbjct: 59  YEEMVKEAIVALKEKSGSSQYAIAKFIEEKHKQLPSNFKKLLLVQIKKLVASGKLVKVKA 118

Query: 356 SYKLPS 339
           SYKLP+
Sbjct: 119 SYKLPA 124


>gb|AAK29453.1|AF352250_1 histone H1 [Lathyrus sativus]
          Length = 306

 Score =  103 bits (256), Expect = 3e-20
 Identities = 51/66 (77%), Positives = 60/66 (90%)
 Frame = -3

Query: 536 YFEMIQEAIVTLKDKTGSSQYAITKFIEDKQKNLPSNFRKLLLGQLKKLVASGKLVKVKS 357
           Y EM++EAIV LK+K+GSSQYAI KFIE+K K LPSNF+KLLL Q+KKLVASGKLVKVK+
Sbjct: 70  YEEMVKEAIVALKEKSGSSQYAIAKFIEEKHKQLPSNFKKLLLVQIKKLVASGKLVKVKA 129

Query: 356 SYKLPS 339
           SYKLP+
Sbjct: 130 SYKLPA 135


>ref|XP_006383690.1| Histone H1 family protein [Populus trichocarpa]
           gi|550339644|gb|ERP61487.1| Histone H1 family protein
           [Populus trichocarpa]
          Length = 285

 Score =  102 bits (255), Expect = 4e-20
 Identities = 50/66 (75%), Positives = 60/66 (90%)
 Frame = -3

Query: 536 YFEMIQEAIVTLKDKTGSSQYAITKFIEDKQKNLPSNFRKLLLGQLKKLVASGKLVKVKS 357
           Y EM+++AIVTLK+KTGSSQYAITKF+E+K K LPSNF+KLLL  LKKLVA+GK+VKVK 
Sbjct: 61  YEEMVKDAIVTLKEKTGSSQYAITKFLEEKHKQLPSNFKKLLLFHLKKLVAAGKIVKVKG 120

Query: 356 SYKLPS 339
           S+KLPS
Sbjct: 121 SFKLPS 126


>emb|CBI35178.3| unnamed protein product [Vitis vinifera]
          Length = 177

 Score =  102 bits (255), Expect = 4e-20
 Identities = 53/66 (80%), Positives = 58/66 (87%)
 Frame = -3

Query: 536 YFEMIQEAIVTLKDKTGSSQYAITKFIEDKQKNLPSNFRKLLLGQLKKLVASGKLVKVKS 357
           + EMI EAIV LK++TGSSQYAITKFIE+K K LPSNFRKLLL  LKKLVAS KLVKVK+
Sbjct: 62  FLEMITEAIVALKERTGSSQYAITKFIEEKHKKLPSNFRKLLLVHLKKLVASEKLVKVKN 121

Query: 356 SYKLPS 339
           SYKLPS
Sbjct: 122 SYKLPS 127


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