BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00002152
         (2098 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006352117.1| PREDICTED: chloroplastic group IIA intron sp...   993   0.0  
ref|XP_004247646.1| PREDICTED: chloroplastic group IIA intron sp...   973   0.0  
gb|EMJ28219.1| hypothetical protein PRUPE_ppa001134mg [Prunus pe...   684   0.0  
gb|EOY05902.1| CRM family member 3A isoform 3 [Theobroma cacao]       667   0.0  
gb|EOY05901.1| CRM family member 3A isoform 2 [Theobroma cacao]       667   0.0  
gb|EOY05900.1| CRM family member 3A isoform 1 [Theobroma cacao]       667   0.0  
ref|XP_002315729.1| hypothetical protein POPTR_0010s08770g [Popu...   654   0.0  
ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron sp...   652   0.0  
ref|XP_004291748.1| PREDICTED: chloroplastic group IIA intron sp...   650   0.0  
gb|EXB29861.1| Chloroplastic group IIA intron splicing facilitat...   650   0.0  
emb|CAN79523.1| hypothetical protein VITISV_010525 [Vitis vinifera]   649   0.0  
ref|XP_006489518.1| PREDICTED: chloroplastic group IIA intron sp...   648   0.0  
ref|XP_006420115.1| hypothetical protein CICLE_v10004262mg [Citr...   640   0.0  
ref|XP_006420114.1| hypothetical protein CICLE_v10004262mg [Citr...   640   0.0  
ref|XP_002517017.1| conserved hypothetical protein [Ricinus comm...   626   e-176
gb|EOY05903.1| CRM family member 3A isoform 4 [Theobroma cacao]       618   e-174
ref|XP_004134094.1| PREDICTED: chloroplastic group IIA intron sp...   608   e-171
ref|XP_003556362.1| PREDICTED: chloroplastic group IIA intron sp...   596   e-167
gb|EPS65975.1| hypothetical protein M569_08800, partial [Genlise...   592   e-166
ref|XP_003590782.1| Chloroplastic group IIA intron splicing faci...   588   e-165

>ref|XP_006352117.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Solanum tuberosum]
          Length = 883

 Score =  993 bits (2568), Expect = 0.0
 Identities = 523/680 (76%), Positives = 544/680 (80%), Gaps = 24/680 (3%)
 Frame = +1

Query: 130  MALVPSHQLYPRTARLSFLRHTSSTPFKKPNLHTPHDVVNQDCVFKKNPPKRSNF----- 294
            MALVPSHQ YPRT RLSFLR++SS PFKKPN H PHD+VNQDC+FK+NPPKRSNF     
Sbjct: 1    MALVPSHQFYPRTTRLSFLRYSSSKPFKKPNFHAPHDIVNQDCIFKQNPPKRSNFMITPH 60

Query: 295  -------------------VVKNSSKRWNLSTISPNXXXXXXXXXXXVFGSSWLGKWNET 417
                               VVKNSS+RWNL TISPN           VF SSWLGKWN T
Sbjct: 61   DVVNQDCIFRRTPSKRSNFVVKNSSRRWNLDTISPNLKSRDSGTS--VFSSSWLGKWNGT 118

Query: 418  HNEINPKKPQIVLNYRXXXXXXXXXXXXXXXXXXXMDRIVEKLKKFGYADETTEKDKMVK 597
             N+I  KK QIVLNYR                   MDRIVEKLKKFGYADE TEK+K  K
Sbjct: 119  RNDIKLKKAQIVLNYRNSNGDTSGSDCEESISGSTMDRIVEKLKKFGYADEATEKEKKEK 178

Query: 598  RDAEKGSIEDIFFVEEGILPNVRGGFSKESPFGDENVIAKDGVVKFPWEKPLVXXXXXXX 777
            R  EKGSIEDIFFVEEGILPNVRGGFS+ESPFGDENVIAKDGVV+FPWE+PLV       
Sbjct: 179  RVVEKGSIEDIFFVEEGILPNVRGGFSEESPFGDENVIAKDGVVRFPWERPLVKKEESNS 238

Query: 778  XXXXXXRTHLAELTLPASELRRLTNLALRIKNKTRITGAGVTQQVVETIREKWNTSEVVR 957
                  RTHLAELTLPASELRRLTNLALRIKNK+RITGAGVTQQVVETIREKW TSEVVR
Sbjct: 239  MASRS-RTHLAELTLPASELRRLTNLALRIKNKSRITGAGVTQQVVETIREKWKTSEVVR 297

Query: 958  LKVEGAPALNMKRMHEILERKTGGLVIWRSGTSVALYRGVGYEIPSDRMKKRIMRRDEIR 1137
            LKVEGAPALNMKRMHEILERKTGGLVIWRSGTSVALYRGV YE PS+RMKKRIMRRDEIR
Sbjct: 298  LKVEGAPALNMKRMHEILERKTGGLVIWRSGTSVALYRGVSYETPSERMKKRIMRRDEIR 357

Query: 1138 HKNVPIVDEESNQNPSEVSPYNAVDSLRTDSANTSEENHNSVRQTEVNYEDEVEKLLDGL 1317
            HKN PIVD ESNQNP      N VDSLR DS +TSEEN N  RQ+EVNYEDEV+KLLDGL
Sbjct: 358  HKNSPIVDGESNQNPR-----NDVDSLREDSVDTSEENKNIDRQSEVNYEDEVDKLLDGL 412

Query: 1318 GPRYTDWPGPGPLPVDADLLPGIVPGYQPPFRILPYGVRSXXXXXXXXXXXXXXXVLPPH 1497
            GPRYTDWPG GPLPVDADLLPGIVPGYQPPFRILPYGVRS               VLPPH
Sbjct: 413  GPRYTDWPGSGPLPVDADLLPGIVPGYQPPFRILPYGVRSTLAAREATALRRLARVLPPH 472

Query: 1498 FALGRSRQHQGLASAMIKLWQRSSIAKIAIKRGVQLTTSERMAEDIKKVTGGMLLSRNKD 1677
            FALGRSRQHQGLAS M+KLWQRSSIAKIAIKRGVQLTTSERMAEDIKK+TGGMLLSRNKD
Sbjct: 473  FALGRSRQHQGLASVMVKLWQRSSIAKIAIKRGVQLTTSERMAEDIKKLTGGMLLSRNKD 532

Query: 1678 FLVFYRGKDFLSPXXXXXXXXXXXXXXXXQDEEEKARLRASDLLTAGVATINSSRTAGTL 1857
            FLVFYRGKDFLSP                QDEEEKARLRAS LLTAGV TINSSRTAGTL
Sbjct: 533  FLVFYRGKDFLSPEVAEALLEKERLAKTLQDEEEKARLRASLLLTAGVTTINSSRTAGTL 592

Query: 1858 GETLDADARWGKRLDDKDKENVMREAEIVRHGNLVRKLEKKLAFAERKLMKAERVLSKVE 2037
            GETLDADARWGKRLDDKDKENVMREAE++RHG+LVRKLEKKLAFAERKLMKAERVLSKVE
Sbjct: 593  GETLDADARWGKRLDDKDKENVMREAELLRHGDLVRKLEKKLAFAERKLMKAERVLSKVE 652

Query: 2038 ETLNPLDRRAEPDSLTDEER 2097
            ETLNPLDRRAEPDSLTDEER
Sbjct: 653  ETLNPLDRRAEPDSLTDEER 672


>ref|XP_004247646.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Solanum lycopersicum]
          Length = 883

 Score =  973 bits (2515), Expect = 0.0
 Identities = 514/680 (75%), Positives = 537/680 (78%), Gaps = 24/680 (3%)
 Frame = +1

Query: 130  MALVPSHQLYPRTARLSFLRHTSSTPFKKPNLHTPHDVVNQDCVFKKNPPKRSNFVV--- 300
            MALVPSHQ YPRT RLSF R++SS PFKKPN H PHD+VNQDC+FK+NP KRSNFVV   
Sbjct: 1    MALVPSHQFYPRTTRLSFFRYSSSKPFKKPNFHAPHDIVNQDCIFKQNPSKRSNFVVTPH 60

Query: 301  ---------------------KNSSKRWNLSTISPNXXXXXXXXXXXVFGSSWLGKWNET 417
                                 KNSS+RWNL TISPN           VF SSWLGKWNET
Sbjct: 61   DVVNKDCIFKRTPLKRSNFVVKNSSRRWNLDTISPNLKSRDSGTS--VFSSSWLGKWNET 118

Query: 418  HNEINPKKPQIVLNYRXXXXXXXXXXXXXXXXXXXMDRIVEKLKKFGYADETTEKDKMVK 597
             N+I  KK QIVLNYR                   MDRIVEKLKKFGYADE TEK+K  K
Sbjct: 119  RNDIKLKKAQIVLNYRNSNGDTSGSDCEESISGSTMDRIVEKLKKFGYADEATEKEKREK 178

Query: 598  RDAEKGSIEDIFFVEEGILPNVRGGFSKESPFGDENVIAKDGVVKFPWEKPLVXXXXXXX 777
            R  EKGSIEDIFFVEEGILPNVRGGFS+E+PFGDEN+IAKDGVV FPWEKPLV       
Sbjct: 179  RVVEKGSIEDIFFVEEGILPNVRGGFSEETPFGDENIIAKDGVVGFPWEKPLVKKEESNS 238

Query: 778  XXXXXXRTHLAELTLPASELRRLTNLALRIKNKTRITGAGVTQQVVETIREKWNTSEVVR 957
                  RTHLAELTLPASELRRLTNLALRIKNK+RITGAGVTQQVVETIREKW TSEVVR
Sbjct: 239  MASRS-RTHLAELTLPASELRRLTNLALRIKNKSRITGAGVTQQVVETIREKWKTSEVVR 297

Query: 958  LKVEGAPALNMKRMHEILERKTGGLVIWRSGTSVALYRGVGYEIPSDRMKKRIMRRDEIR 1137
            LKVEGAPALNMKRMHEILERKTGGLVIWRSGTSVALYRGV YE PS+RMKKRIMRRDEIR
Sbjct: 298  LKVEGAPALNMKRMHEILERKTGGLVIWRSGTSVALYRGVSYETPSERMKKRIMRRDEIR 357

Query: 1138 HKNVPIVDEESNQNPSEVSPYNAVDSLRTDSANTSEENHNSVRQTEVNYEDEVEKLLDGL 1317
             KN PIVD ESNQN       N VDSLR DS +TSEEN +  RQ+EVNYEDEV+KLLDGL
Sbjct: 358  QKNSPIVDGESNQNSR-----NDVDSLREDSVDTSEENKSIDRQSEVNYEDEVDKLLDGL 412

Query: 1318 GPRYTDWPGPGPLPVDADLLPGIVPGYQPPFRILPYGVRSXXXXXXXXXXXXXXXVLPPH 1497
            GPRYTDWPG GPLPVDADLLPGIVPGYQPPFRILPYGVRS               VLPPH
Sbjct: 413  GPRYTDWPGSGPLPVDADLLPGIVPGYQPPFRILPYGVRSTLAAREATALRRLARVLPPH 472

Query: 1498 FALGRSRQHQGLASAMIKLWQRSSIAKIAIKRGVQLTTSERMAEDIKKVTGGMLLSRNKD 1677
            FALGRSRQHQGLAS M+KLWQRSSIAKIAIKRGVQLTTSERMAEDIKK+TGGMLLSRNKD
Sbjct: 473  FALGRSRQHQGLASVMVKLWQRSSIAKIAIKRGVQLTTSERMAEDIKKLTGGMLLSRNKD 532

Query: 1678 FLVFYRGKDFLSPXXXXXXXXXXXXXXXXQDEEEKARLRASDLLTAGVATINSSRTAGTL 1857
            FLVFYRGKDFLSP                QDEEEKARLRAS  LTAGV TINSSRTAGTL
Sbjct: 533  FLVFYRGKDFLSPEVAEALLEKERLAKTLQDEEEKARLRASLNLTAGVTTINSSRTAGTL 592

Query: 1858 GETLDADARWGKRLDDKDKENVMREAEIVRHGNLVRKLEKKLAFAERKLMKAERVLSKVE 2037
            GETLDADARWGKRLDDK KENVMREAE++RHG+LVRKLEKKLAFAE+KLMKAERVLSKVE
Sbjct: 593  GETLDADARWGKRLDDKHKENVMREAELLRHGDLVRKLEKKLAFAEKKLMKAERVLSKVE 652

Query: 2038 ETLNPLDRRAEPDSLTDEER 2097
            ETLNPLDR AEPDSLTDEER
Sbjct: 653  ETLNPLDRHAEPDSLTDEER 672


>gb|EMJ28219.1| hypothetical protein PRUPE_ppa001134mg [Prunus persica]
          Length = 899

 Score =  684 bits (1764), Expect = 0.0
 Identities = 372/679 (54%), Positives = 453/679 (66%), Gaps = 23/679 (3%)
 Frame = +1

Query: 130  MALVPSHQLYPRTARLSF--------------LRHTSSTPFKKPNLHTPHDVVNQDCVFK 267
            M LVPS QLYP +   SF               R  SS PFKK   +  H  ++     +
Sbjct: 1    MTLVPSRQLYPTSLFDSFQSSFSKFHGPHIHLFRCGSSIPFKKHTFYATHYTISSTLNPE 60

Query: 268  KNPPKRSNFVVKNSSKRWNLSTISPNXXXXXXXXXXXVFGSSWLGKWNETHNEINPKKPQ 447
            +NP ++SNFV KN      +S   P               SSW+ KWNE+H    PK P+
Sbjct: 61   QNPLRKSNFVRKNQP----ISQYKPKKNFS---------SSSWIDKWNESHKHNRPKPPR 107

Query: 448  IVLNYRXXXXXXXXXXXXXXXXXXX--------MDRIVEKLKKFGYADETTEKDKMVKRD 603
             VL+Y+                           M++IVEKLKKFGY D++ E    V+  
Sbjct: 108  AVLDYQSSESGNLSGSGYAEGDGGGGRNSSGSTMEKIVEKLKKFGYVDDSNENKGEVRDS 167

Query: 604  A-EKGSIEDIFFVEEGILPNVRGGFSKESPFGDENVIAKDGVVKFPWEKPLVXXXXXXXX 780
              EKGS+EDIF++EEG+LPN RGGFS+ESP G ENV   DG V+FPWEKP          
Sbjct: 168  VIEKGSVEDIFYIEEGMLPNSRGGFSEESPLGIENVFGGDGKVRFPWEKPKEEEKQEEGS 227

Query: 781  XXXXXRTHLAELTLPASELRRLTNLALRIKNKTRITGAGVTQQVVETIREKWNTSEVVRL 960
                 RT LAELTLP SELRRLTNL  + K+KTRI G GVTQ VVE I E+W TSE+VRL
Sbjct: 228  VRRKSRTSLAELTLPESELRRLTNLTFQKKHKTRIGGGGVTQAVVEMIHERWKTSEIVRL 287

Query: 961  KVEGAPALNMKRMHEILERKTGGLVIWRSGTSVALYRGVGYEIPSDRMKKRIMRRDEIRH 1140
            K+EG PALNMKRMHEILERKTGGLVIWRSGTS++LYRGV YE+PS ++ KRI ++++I  
Sbjct: 288  KIEGPPALNMKRMHEILERKTGGLVIWRSGTSLSLYRGVSYEVPSVKLNKRIYKKNDISS 347

Query: 1141 KNVPIVDEESNQNPSEVSPYNAVDSLRTDSANTSEENHNSVRQTEVNYEDEVEKLLDGLG 1320
              +P V ++S  + +E++ Y+ V + +  S NTS+E  ++ +  EV YEDEV+KLLD LG
Sbjct: 348  APLPTVADKSVGDFAELASYSNVKTPQEKSENTSQEKEDTEQLAEVKYEDEVDKLLDSLG 407

Query: 1321 PRYTDWPGPGPLPVDADLLPGIVPGYQPPFRILPYGVRSXXXXXXXXXXXXXXXVLPPHF 1500
            PR+ DWPG  PLPVDAD+LPGIVPGYQPPFR+LPYGVRS               VLPPHF
Sbjct: 408  PRFKDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLGLKEATSLRRLARVLPPHF 467

Query: 1501 ALGRSRQHQGLASAMIKLWQRSSIAKIAIKRGVQLTTSERMAEDIKKVTGGMLLSRNKDF 1680
            ALGRSRQ QGLA AM KLW++S IAKIA+KRGVQLTTSERMAEDIK++TGG++LSRNKDF
Sbjct: 468  ALGRSRQLQGLAVAMAKLWEKSLIAKIALKRGVQLTTSERMAEDIKRLTGGVMLSRNKDF 527

Query: 1681 LVFYRGKDFLSPXXXXXXXXXXXXXXXXQDEEEKARLRASDLLTAGVATINSSRTAGTLG 1860
            LVFYRGK+FLSP                QDEEE+ARLRAS +    V       TAGTLG
Sbjct: 528  LVFYRGKNFLSPDVTEALLERERLAKSLQDEEEQARLRASAMFIPNVEVAQHFGTAGTLG 587

Query: 1861 ETLDADARWGKRLDDKDKENVMREAEIVRHGNLVRKLEKKLAFAERKLMKAERVLSKVEE 2040
            ETLDADA+WGKRL   DKE VMREA+I+RH +LVRKLE+KL+FAERKLM+AE+ LSKVEE
Sbjct: 588  ETLDADAKWGKRL---DKEKVMREADILRHAHLVRKLERKLSFAERKLMRAEQALSKVEE 644

Query: 2041 TLNPLDRRAEPDSLTDEER 2097
            +L P  ++A+P+S+TDEER
Sbjct: 645  SLKPSKQQADPESITDEER 663


>gb|EOY05902.1| CRM family member 3A isoform 3 [Theobroma cacao]
          Length = 856

 Score =  667 bits (1722), Expect = 0.0
 Identities = 369/667 (55%), Positives = 436/667 (65%), Gaps = 11/667 (1%)
 Frame = +1

Query: 130  MALVPSHQLYPRTARLSFLRHTSSTPFKKPNLHTPHDVVNQDCVFKKN--PPKRSNFVVK 303
            M L+P+ Q +P T   S    +  T   K      H +    C +  +  P K S     
Sbjct: 1    MTLLPTRQFHPATTTKSTFLDSFQTRLSKF-----HGLPLPFCSYDSSNFPLKTSTLYAA 55

Query: 304  NSSKRWN-LSTISPNXXXXXXXXXXXVFGSSWLGKWNETHNEINPKKPQIVLNYRXXXXX 480
            N +   N L    P             F S+WL  WN+TH    PK P+ V NYR     
Sbjct: 56   NYTVTSNSLFHQYPKSKTKAFPTKDPTFRSNWLDSWNKTHKGFGPKPPKTVFNYRKKGDV 115

Query: 481  XXXXXXXXXXXXXX----MDRIVEKLKKFGYADETTEK----DKMVKRDAEKGSIEDIFF 636
                              M++IVEKLKKFGY  E  E+    ++  KR  E+GSIEDIF+
Sbjct: 116  WSLSYSQSDNNGRSSSSTMEKIVEKLKKFGYIGEENEQKEKGEEEPKRVIERGSIEDIFY 175

Query: 637  VEEGILPNVRGGFSKESPFGDENVIAKDGVVKFPWEKPLVXXXXXXXXXXXXXRTHLAEL 816
            VEEG+LPN RGGFSKESP G ENV   DG V+FPWEK                +T LAEL
Sbjct: 176  VEEGMLPNNRGGFSKESPLGMENVFGSDGEVRFPWEKRKEDEEEGGWTARRDSKTSLAEL 235

Query: 817  TLPASELRRLTNLALRIKNKTRITGAGVTQQVVETIREKWNTSEVVRLKVEGAPALNMKR 996
            TLP SELRRL NL  R K+K RI GAGVTQ+VV+TI EKW T E+VRLK+EGAPALNMKR
Sbjct: 236  TLPESELRRLRNLTFRTKSKVRIKGAGVTQEVVDTIHEKWKTEEIVRLKIEGAPALNMKR 295

Query: 997  MHEILERKTGGLVIWRSGTSVALYRGVGYEIPSDRMKKRIMRRDEIRHKNVPIVDEESNQ 1176
            MHEILERKTGGLVIWRSGTSV+LYRGV YE+PS  + KRI +R+E     +P V +++ +
Sbjct: 296  MHEILERKTGGLVIWRSGTSVSLYRGVSYEVPSVHLSKRIYKRNETFTYALPSVSDKT-K 354

Query: 1177 NPSEVSPYNAVDSLRTDSANTSEENHNSVRQTEVNYEDEVEKLLDGLGPRYTDWPGPGPL 1356
            + S +  +  V S + +S   +E N ++    E+ YEDEV+KLL+GLGPRYTDWPG  PL
Sbjct: 355  DLSSLGSHKDVVSPQANSETAAEGNKDTESLPEIRYEDEVDKLLEGLGPRYTDWPGCNPL 414

Query: 1357 PVDADLLPGIVPGYQPPFRILPYGVRSXXXXXXXXXXXXXXXVLPPHFALGRSRQHQGLA 1536
            PVDADLLPGIV GYQPPFR+LPYGVRS               VLPPHFA+GRSRQ QGLA
Sbjct: 415  PVDADLLPGIVAGYQPPFRVLPYGVRSSLGLKEATSLRRLARVLPPHFAIGRSRQLQGLA 474

Query: 1537 SAMIKLWQRSSIAKIAIKRGVQLTTSERMAEDIKKVTGGMLLSRNKDFLVFYRGKDFLSP 1716
             AMIKLW++SSIAKIA+KRGVQLTTSERMAEDIKK+TGGMLLSRNKDFLVFYRGK+FLS 
Sbjct: 475  VAMIKLWEKSSIAKIALKRGVQLTTSERMAEDIKKLTGGMLLSRNKDFLVFYRGKNFLSA 534

Query: 1717 XXXXXXXXXXXXXXXXQDEEEKARLRASDLLTAGVATINSSRTAGTLGETLDADARWGKR 1896
                            QDEEE+ARLRAS  L         S  AGTLGETLDADARWGKR
Sbjct: 535  DVAEALVERERLAKSLQDEEEQARLRASAFLVPSTEVAEQSGAAGTLGETLDADARWGKR 594

Query: 1897 LDDKDKENVMREAEIVRHGNLVRKLEKKLAFAERKLMKAERVLSKVEETLNPLDRRAEPD 2076
            LD+  KE VM+EAEI+RH NLVRKL+K LAFA+RKL+KAER L+KVE+ L P DR+A+P+
Sbjct: 595  LDNHHKEKVMKEAEILRHANLVRKLDKNLAFADRKLLKAERALTKVEDYLKPADRQADPE 654

Query: 2077 SLTDEER 2097
            S+TDEER
Sbjct: 655  SITDEER 661


>gb|EOY05901.1| CRM family member 3A isoform 2 [Theobroma cacao]
          Length = 685

 Score =  667 bits (1722), Expect = 0.0
 Identities = 369/667 (55%), Positives = 436/667 (65%), Gaps = 11/667 (1%)
 Frame = +1

Query: 130  MALVPSHQLYPRTARLSFLRHTSSTPFKKPNLHTPHDVVNQDCVFKKN--PPKRSNFVVK 303
            M L+P+ Q +P T   S    +  T   K      H +    C +  +  P K S     
Sbjct: 1    MTLLPTRQFHPATTTKSTFLDSFQTRLSKF-----HGLPLPFCSYDSSNFPLKTSTLYAA 55

Query: 304  NSSKRWN-LSTISPNXXXXXXXXXXXVFGSSWLGKWNETHNEINPKKPQIVLNYRXXXXX 480
            N +   N L    P             F S+WL  WN+TH    PK P+ V NYR     
Sbjct: 56   NYTVTSNSLFHQYPKSKTKAFPTKDPTFRSNWLDSWNKTHKGFGPKPPKTVFNYRKKGDV 115

Query: 481  XXXXXXXXXXXXXX----MDRIVEKLKKFGYADETTEK----DKMVKRDAEKGSIEDIFF 636
                              M++IVEKLKKFGY  E  E+    ++  KR  E+GSIEDIF+
Sbjct: 116  WSLSYSQSDNNGRSSSSTMEKIVEKLKKFGYIGEENEQKEKGEEEPKRVIERGSIEDIFY 175

Query: 637  VEEGILPNVRGGFSKESPFGDENVIAKDGVVKFPWEKPLVXXXXXXXXXXXXXRTHLAEL 816
            VEEG+LPN RGGFSKESP G ENV   DG V+FPWEK                +T LAEL
Sbjct: 176  VEEGMLPNNRGGFSKESPLGMENVFGSDGEVRFPWEKRKEDEEEGGWTARRDSKTSLAEL 235

Query: 817  TLPASELRRLTNLALRIKNKTRITGAGVTQQVVETIREKWNTSEVVRLKVEGAPALNMKR 996
            TLP SELRRL NL  R K+K RI GAGVTQ+VV+TI EKW T E+VRLK+EGAPALNMKR
Sbjct: 236  TLPESELRRLRNLTFRTKSKVRIKGAGVTQEVVDTIHEKWKTEEIVRLKIEGAPALNMKR 295

Query: 997  MHEILERKTGGLVIWRSGTSVALYRGVGYEIPSDRMKKRIMRRDEIRHKNVPIVDEESNQ 1176
            MHEILERKTGGLVIWRSGTSV+LYRGV YE+PS  + KRI +R+E     +P V +++ +
Sbjct: 296  MHEILERKTGGLVIWRSGTSVSLYRGVSYEVPSVHLSKRIYKRNETFTYALPSVSDKT-K 354

Query: 1177 NPSEVSPYNAVDSLRTDSANTSEENHNSVRQTEVNYEDEVEKLLDGLGPRYTDWPGPGPL 1356
            + S +  +  V S + +S   +E N ++    E+ YEDEV+KLL+GLGPRYTDWPG  PL
Sbjct: 355  DLSSLGSHKDVVSPQANSETAAEGNKDTESLPEIRYEDEVDKLLEGLGPRYTDWPGCNPL 414

Query: 1357 PVDADLLPGIVPGYQPPFRILPYGVRSXXXXXXXXXXXXXXXVLPPHFALGRSRQHQGLA 1536
            PVDADLLPGIV GYQPPFR+LPYGVRS               VLPPHFA+GRSRQ QGLA
Sbjct: 415  PVDADLLPGIVAGYQPPFRVLPYGVRSSLGLKEATSLRRLARVLPPHFAIGRSRQLQGLA 474

Query: 1537 SAMIKLWQRSSIAKIAIKRGVQLTTSERMAEDIKKVTGGMLLSRNKDFLVFYRGKDFLSP 1716
             AMIKLW++SSIAKIA+KRGVQLTTSERMAEDIKK+TGGMLLSRNKDFLVFYRGK+FLS 
Sbjct: 475  VAMIKLWEKSSIAKIALKRGVQLTTSERMAEDIKKLTGGMLLSRNKDFLVFYRGKNFLSA 534

Query: 1717 XXXXXXXXXXXXXXXXQDEEEKARLRASDLLTAGVATINSSRTAGTLGETLDADARWGKR 1896
                            QDEEE+ARLRAS  L         S  AGTLGETLDADARWGKR
Sbjct: 535  DVAEALVERERLAKSLQDEEEQARLRASAFLVPSTEVAEQSGAAGTLGETLDADARWGKR 594

Query: 1897 LDDKDKENVMREAEIVRHGNLVRKLEKKLAFAERKLMKAERVLSKVEETLNPLDRRAEPD 2076
            LD+  KE VM+EAEI+RH NLVRKL+K LAFA+RKL+KAER L+KVE+ L P DR+A+P+
Sbjct: 595  LDNHHKEKVMKEAEILRHANLVRKLDKNLAFADRKLLKAERALTKVEDYLKPADRQADPE 654

Query: 2077 SLTDEER 2097
            S+TDEER
Sbjct: 655  SITDEER 661


>gb|EOY05900.1| CRM family member 3A isoform 1 [Theobroma cacao]
          Length = 876

 Score =  667 bits (1722), Expect = 0.0
 Identities = 369/667 (55%), Positives = 436/667 (65%), Gaps = 11/667 (1%)
 Frame = +1

Query: 130  MALVPSHQLYPRTARLSFLRHTSSTPFKKPNLHTPHDVVNQDCVFKKN--PPKRSNFVVK 303
            M L+P+ Q +P T   S    +  T   K      H +    C +  +  P K S     
Sbjct: 1    MTLLPTRQFHPATTTKSTFLDSFQTRLSKF-----HGLPLPFCSYDSSNFPLKTSTLYAA 55

Query: 304  NSSKRWN-LSTISPNXXXXXXXXXXXVFGSSWLGKWNETHNEINPKKPQIVLNYRXXXXX 480
            N +   N L    P             F S+WL  WN+TH    PK P+ V NYR     
Sbjct: 56   NYTVTSNSLFHQYPKSKTKAFPTKDPTFRSNWLDSWNKTHKGFGPKPPKTVFNYRKKGDV 115

Query: 481  XXXXXXXXXXXXXX----MDRIVEKLKKFGYADETTEK----DKMVKRDAEKGSIEDIFF 636
                              M++IVEKLKKFGY  E  E+    ++  KR  E+GSIEDIF+
Sbjct: 116  WSLSYSQSDNNGRSSSSTMEKIVEKLKKFGYIGEENEQKEKGEEEPKRVIERGSIEDIFY 175

Query: 637  VEEGILPNVRGGFSKESPFGDENVIAKDGVVKFPWEKPLVXXXXXXXXXXXXXRTHLAEL 816
            VEEG+LPN RGGFSKESP G ENV   DG V+FPWEK                +T LAEL
Sbjct: 176  VEEGMLPNNRGGFSKESPLGMENVFGSDGEVRFPWEKRKEDEEEGGWTARRDSKTSLAEL 235

Query: 817  TLPASELRRLTNLALRIKNKTRITGAGVTQQVVETIREKWNTSEVVRLKVEGAPALNMKR 996
            TLP SELRRL NL  R K+K RI GAGVTQ+VV+TI EKW T E+VRLK+EGAPALNMKR
Sbjct: 236  TLPESELRRLRNLTFRTKSKVRIKGAGVTQEVVDTIHEKWKTEEIVRLKIEGAPALNMKR 295

Query: 997  MHEILERKTGGLVIWRSGTSVALYRGVGYEIPSDRMKKRIMRRDEIRHKNVPIVDEESNQ 1176
            MHEILERKTGGLVIWRSGTSV+LYRGV YE+PS  + KRI +R+E     +P V +++ +
Sbjct: 296  MHEILERKTGGLVIWRSGTSVSLYRGVSYEVPSVHLSKRIYKRNETFTYALPSVSDKT-K 354

Query: 1177 NPSEVSPYNAVDSLRTDSANTSEENHNSVRQTEVNYEDEVEKLLDGLGPRYTDWPGPGPL 1356
            + S +  +  V S + +S   +E N ++    E+ YEDEV+KLL+GLGPRYTDWPG  PL
Sbjct: 355  DLSSLGSHKDVVSPQANSETAAEGNKDTESLPEIRYEDEVDKLLEGLGPRYTDWPGCNPL 414

Query: 1357 PVDADLLPGIVPGYQPPFRILPYGVRSXXXXXXXXXXXXXXXVLPPHFALGRSRQHQGLA 1536
            PVDADLLPGIV GYQPPFR+LPYGVRS               VLPPHFA+GRSRQ QGLA
Sbjct: 415  PVDADLLPGIVAGYQPPFRVLPYGVRSSLGLKEATSLRRLARVLPPHFAIGRSRQLQGLA 474

Query: 1537 SAMIKLWQRSSIAKIAIKRGVQLTTSERMAEDIKKVTGGMLLSRNKDFLVFYRGKDFLSP 1716
             AMIKLW++SSIAKIA+KRGVQLTTSERMAEDIKK+TGGMLLSRNKDFLVFYRGK+FLS 
Sbjct: 475  VAMIKLWEKSSIAKIALKRGVQLTTSERMAEDIKKLTGGMLLSRNKDFLVFYRGKNFLSA 534

Query: 1717 XXXXXXXXXXXXXXXXQDEEEKARLRASDLLTAGVATINSSRTAGTLGETLDADARWGKR 1896
                            QDEEE+ARLRAS  L         S  AGTLGETLDADARWGKR
Sbjct: 535  DVAEALVERERLAKSLQDEEEQARLRASAFLVPSTEVAEQSGAAGTLGETLDADARWGKR 594

Query: 1897 LDDKDKENVMREAEIVRHGNLVRKLEKKLAFAERKLMKAERVLSKVEETLNPLDRRAEPD 2076
            LD+  KE VM+EAEI+RH NLVRKL+K LAFA+RKL+KAER L+KVE+ L P DR+A+P+
Sbjct: 595  LDNHHKEKVMKEAEILRHANLVRKLDKNLAFADRKLLKAERALTKVEDYLKPADRQADPE 654

Query: 2077 SLTDEER 2097
            S+TDEER
Sbjct: 655  SITDEER 661


>ref|XP_002315729.1| hypothetical protein POPTR_0010s08770g [Populus trichocarpa]
            gi|222864769|gb|EEF01900.1| hypothetical protein
            POPTR_0010s08770g [Populus trichocarpa]
          Length = 894

 Score =  654 bits (1686), Expect = 0.0
 Identities = 362/670 (54%), Positives = 438/670 (65%), Gaps = 14/670 (2%)
 Frame = +1

Query: 130  MALVPSHQLYPRTAR----------LSFLRHTSSTPFKKPNLHTPHDVVNQDCVFKKNPP 279
            MALVPS QLY  + +          L F R++SS P +    H+ +     D    KNP 
Sbjct: 1    MALVPSRQLYIDSFQSSFSKFHGTPLQFFRYSSSFPLRS---HSGYACSITD----KNPS 53

Query: 280  KRSNFVVKNSSKRWNLSTISPNXXXXXXXXXXXVFGSSWLGKWNETHNEINPKKPQIVLN 459
             +S     + SK  NLST                 GSSW   WN+ + +  P+ PQ V +
Sbjct: 54   TKSTSFPTDKSKTLNLST-----------------GSSWFFNWNKPNKQNLPRTPQAVFD 96

Query: 460  YRXXXXXXXXXXXXXXXXXXXMDRIVEKLKKFGY--ADETTEKDKMVKRDAEKGSIEDIF 633
            YR                   M++IVEKLKK GY   D    K++M +R  EKGS+EDIF
Sbjct: 97   YRSNNSNSSGSGST-------MEKIVEKLKKHGYMDGDVNENKERMQERVIEKGSVEDIF 149

Query: 634  FVEEGILPNVRGGFSKESPFGDENVIAKDGVVKFPWEKPLVXXXXXXXXXXXXXRTHLAE 813
            +VEEG+LPN RGGFSKESP G E+V   DG V+FPWEKP               RT LAE
Sbjct: 150  YVEEGMLPNARGGFSKESPLGVEDVFRSDGEVRFPWEKPKKEEDEGKWTARSKSRTSLAE 209

Query: 814  LTLPASELRRLTNLALRIKNKTRITGAGVTQQVVETIREKWNTSEVVRLKVEGAPALNMK 993
            LTLP SELRRL NL    K+KTR+ G GVTQ+VV+ I +KW TSE+ R+KVEGAPALNMK
Sbjct: 210  LTLPESELRRLRNLTYGTKSKTRVGGRGVTQEVVDAIHDKWKTSEIARVKVEGAPALNMK 269

Query: 994  RMHEILERKTGGLVIWRSGTSVALYRGVGYEIPSDRMKKRIMRRDEIRHKNVPIVDEESN 1173
            RMHEILE KTGGLVIWRSG +V+LYRGV YE P+ + KKRI ++ E    ++P     + 
Sbjct: 270  RMHEILENKTGGLVIWRSGATVSLYRGVSYEDPALKWKKRIFKKKETSSNSLPAATSITI 329

Query: 1174 QNPSEVSPYNAVDSLRTDS-ANTSEENHNSVR-QTEVNYEDEVEKLLDGLGPRYTDWPGP 1347
             + S+ SP N + + R  +  N    N    + QT+V YEDEV+KLLDGLGPRYTDWPG 
Sbjct: 330  GSQSKNSPDNEIHAPRPKTEINVEAANQKETKTQTDVKYEDEVDKLLDGLGPRYTDWPGL 389

Query: 1348 GPLPVDADLLPGIVPGYQPPFRILPYGVRSXXXXXXXXXXXXXXXVLPPHFALGRSRQHQ 1527
             PLPVDAD+LPG++PGYQPPFRILPYGVR                VLPPHFA+GRSRQ Q
Sbjct: 390  DPLPVDADMLPGVIPGYQPPFRILPYGVRPTLGRQDSTSLRRLARVLPPHFAVGRSRQLQ 449

Query: 1528 GLASAMIKLWQRSSIAKIAIKRGVQLTTSERMAEDIKKVTGGMLLSRNKDFLVFYRGKDF 1707
            GLA AMIKLW++SSI K+A+KRGVQLTTSERMAEDIKK+TGG+LLSRNKDFLVFYRGKDF
Sbjct: 450  GLAVAMIKLWEKSSIVKVALKRGVQLTTSERMAEDIKKLTGGLLLSRNKDFLVFYRGKDF 509

Query: 1708 LSPXXXXXXXXXXXXXXXXQDEEEKARLRASDLLTAGVATINSSRTAGTLGETLDADARW 1887
            LSP                QDEEE+ARLRAS L+      +  S  AG+L ETLDADA+W
Sbjct: 510  LSPEVSEALLERERLAKSLQDEEEQARLRASALVIPSDEIMEESGIAGSLEETLDADAKW 569

Query: 1888 GKRLDDKDKENVMREAEIVRHGNLVRKLEKKLAFAERKLMKAERVLSKVEETLNPLDRRA 2067
            GKRLDD  KE ++REAEIVRH ++VR+LEKKLAFA+RKL +AER L+KVE  L P +R+A
Sbjct: 570  GKRLDDCHKEKIIREAEIVRHASIVRRLEKKLAFAQRKLRRAERTLNKVEGFLKPSERQA 629

Query: 2068 EPDSLTDEER 2097
            +P+S+TDEER
Sbjct: 630  DPESITDEER 639


>ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Vitis vinifera]
            gi|297737163|emb|CBI26364.3| unnamed protein product
            [Vitis vinifera]
          Length = 902

 Score =  652 bits (1681), Expect = 0.0
 Identities = 358/673 (53%), Positives = 445/673 (66%), Gaps = 17/673 (2%)
 Frame = +1

Query: 130  MALVPSHQLYPRTA---------RLSFLRHTSSTPFKKPNLHTPHDVVNQDCVFKKNPPK 282
            MAL+PS Q YP T          RL F R+ SS  F+  + +   + +  +     NP +
Sbjct: 1    MALLPSRQFYPTTTSFLDSFHSTRLQFFRYGSSNRFRTHSSYVARNTIASNST---NPQR 57

Query: 283  RSNFVVKNSS-KRWNLSTISPNXXXXXXXXXXXVFGSSWLGKWNETHNEINPKKPQIVLN 459
            +SN V  N+   +++   +S +             G +W+ KWN  H + +PK+ + V+N
Sbjct: 58   KSNIVFTNTPVSQYDSGGVSSS-------------GGNWIDKWNGPHQKSHPKESRPVMN 104

Query: 460  YRXXXXXXXXXXXXXXXXXXXMDRIVEKLKKFGYADETTE-KDKMVKRDAEKGSIEDIFF 636
            YR                   M++IVEKLKKFGY D+  E K+ + +R  EKGSIEDIF+
Sbjct: 105  YRNSETVSRSDGGSGGGST--MEKIVEKLKKFGYMDDVKETKENVQERIIEKGSIEDIFY 162

Query: 637  VEEGILPNVRGGFSKESPFGDENVIAKDGVVKFPWEKPLVXXXXXXXXXXXXXRTHLAEL 816
            +EEGILPN +GGFS +SP G EN    +G V+FPWE+P V             RT LAEL
Sbjct: 163  IEEGILPNPQGGFSLDSPLGVENKGDGNGEVRFPWERPKVEEGSVRIKS----RTSLAEL 218

Query: 817  TLPASELRRLTNLALRIKNKTRITGAGVTQQVVETIREKWNTSEVVRLKVEGAPALNMKR 996
            TLP SELRRL NL +R KNKT+I G GVTQ VV+ IREKW TSE+V+LK EGA ALNM+R
Sbjct: 219  TLPESELRRLRNLTMRTKNKTKIGGGGVTQAVVDMIREKWKTSEIVKLKCEGAAALNMRR 278

Query: 997  MHEILERKTGGLVIWRSGTSVALYRGVGYEIPSDRMKKRIMRRDEIRHKNVPIVDEESNQ 1176
            +HEILERKTGGLVIWRSGTSV+LYRGV YE+P  ++ KR+ +++E  H +   +   S  
Sbjct: 279  IHEILERKTGGLVIWRSGTSVSLYRGVSYEVPV-QLNKRVYKKNETSHSSFSSITPNSFA 337

Query: 1177 NPSEVSPYNAVDSLRTDSANTSE------ENHNSVRQTEVNYEDEVEKLLDGLGPRYTDW 1338
              S  +  NA       + + S+      +  N   ++EV YEDE++KLLDGLGPRYTDW
Sbjct: 338  ISSNKTSGNAPAVGSNQNVHASQATLNITDGENKDTESEVKYEDEIDKLLDGLGPRYTDW 397

Query: 1339 PGPGPLPVDADLLPGIVPGYQPPFRILPYGVRSXXXXXXXXXXXXXXXVLPPHFALGRSR 1518
            PG  PLP+DADLLPG + GYQPPFRILPYGVRS               VLPPHFALGRSR
Sbjct: 398  PGCDPLPIDADLLPGKIHGYQPPFRILPYGVRSSLGLKEATALRRLARVLPPHFALGRSR 457

Query: 1519 QHQGLASAMIKLWQRSSIAKIAIKRGVQLTTSERMAEDIKKVTGGMLLSRNKDFLVFYRG 1698
            Q +GLA AMIKLW+RSSIAK+A+KRGVQLTTSERMAEDIKK+TGG+LLSRNKDFLVFYRG
Sbjct: 458  QLEGLAMAMIKLWERSSIAKVALKRGVQLTTSERMAEDIKKLTGGVLLSRNKDFLVFYRG 517

Query: 1699 KDFLSPXXXXXXXXXXXXXXXXQDEEEKARLRASDLLTAGVATINSSRTAGTLGETLDAD 1878
            K+FLS                 QDEEE+ARLRAS L+T  V       +AGTLGETL+AD
Sbjct: 518  KNFLSSDVTEALLERERLAKALQDEEEQARLRASTLITPTVGITEQVGSAGTLGETLEAD 577

Query: 1879 ARWGKRLDDKDKENVMREAEIVRHGNLVRKLEKKLAFAERKLMKAERVLSKVEETLNPLD 2058
            ARWGKRLDD DK+ ++++AE+ RH NLVRKLE++LA AERKLMKAE  LSKVEE L P +
Sbjct: 578  ARWGKRLDDHDKQKMLKKAEVARHANLVRKLERRLALAERKLMKAENALSKVEEFLKPAN 637

Query: 2059 RRAEPDSLTDEER 2097
            R A+P+S+TDEER
Sbjct: 638  RPADPESITDEER 650


>ref|XP_004291748.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 852

 Score =  650 bits (1678), Expect = 0.0
 Identities = 355/669 (53%), Positives = 440/669 (65%), Gaps = 13/669 (1%)
 Frame = +1

Query: 130  MALVPSHQLYPRTARLSFLR----------HTSSTPFKKPNLHTPHDVVNQDCVFKKNPP 279
            M LVPS QLYP +   S L             SS PFKK + H     +      ++NPP
Sbjct: 1    MTLVPSRQLYPTSLLESSLSKFHGTHFHLFRYSSIPFKKQSFHATQYFITSSLTPEQNPP 60

Query: 280  KRSNFVVKNSSKRWNLSTISPNXXXXXXXXXXXVFGSSWLGKWNETHNEINPKKPQIVLN 459
            ++ N ++       NLS+ S                  W+ +WN++  +  P++P+ VL+
Sbjct: 61   RKLNLLICQYKPTKNLSSCS------------------WIDRWNDSRKQHGPRRPRAVLD 102

Query: 460  YRXXXXXXXXXXXXXXXXXXXMDRIVEKLKKFGYA--DETTEKDKMVKRDAEKGSIEDIF 633
            Y+                   MD+IVEKLKKFGY   D+   + ++ +R  EKGS+EDIF
Sbjct: 103  YQSNESGNLSSDGNDGGST--MDKIVEKLKKFGYIAEDKNEGRGEVRERVIEKGSVEDIF 160

Query: 634  FVEEGILPNVRGGFSKESPFGDENVIAKDG-VVKFPWEKPLVXXXXXXXXXXXXXRTHLA 810
            +VEEG+LPN RGGFS  SP G E+V    G  V+FPWEKP               RT LA
Sbjct: 161  YVEEGMLPNSRGGFSGVSPLGTEDVFGDGGGEVRFPWEKPREREKEEGGSIRRRSRTSLA 220

Query: 811  ELTLPASELRRLTNLALRIKNKTRITGAGVTQQVVETIREKWNTSEVVRLKVEGAPALNM 990
            ELTLP SELRRL NL  + K+KT+I GAGVTQ VVE I E+W T+E+VRLK+EG PALNM
Sbjct: 221  ELTLPESELRRLRNLTFQKKHKTKIGGAGVTQAVVEMIHERWKTAEIVRLKIEGPPALNM 280

Query: 991  KRMHEILERKTGGLVIWRSGTSVALYRGVGYEIPSDRMKKRIMRRDEIRHKNVPIVDEES 1170
            KRMHEILERKTGGLV+WRSGTS++LYRGV YE+PS ++ K+I +R+EI   ++P V ++S
Sbjct: 281  KRMHEILERKTGGLVVWRSGTSLSLYRGVSYEVPSVQLNKQIFKRNEISSTSLPTVADKS 340

Query: 1171 NQNPSEVSPYNAVDSLRTDSANTSEENHNSVRQTEVNYEDEVEKLLDGLGPRYTDWPGPG 1350
               P   + Y+ V +    S N S+E  ++ +  EV YEDEV++LLD +GPR+ DWPG  
Sbjct: 341  VAEPYVCATYSNVKTPLEMSENASQETEDTEQLPEVKYEDEVDELLDSIGPRFKDWPGCD 400

Query: 1351 PLPVDADLLPGIVPGYQPPFRILPYGVRSXXXXXXXXXXXXXXXVLPPHFALGRSRQHQG 1530
            PLPVDAD+LPGIVPG+QPPFRILPYGVRS               VLPPHFALGR+RQ QG
Sbjct: 401  PLPVDADMLPGIVPGFQPPFRILPYGVRSTLGLKEATSLRRLARVLPPHFALGRNRQLQG 460

Query: 1531 LASAMIKLWQRSSIAKIAIKRGVQLTTSERMAEDIKKVTGGMLLSRNKDFLVFYRGKDFL 1710
            LA AM KLW+RS IAKIA+KRGVQLTTSERMAEDIKK+TGG+LLSRNKDFLVFYRGK+FL
Sbjct: 461  LAVAMSKLWERSLIAKIALKRGVQLTTSERMAEDIKKLTGGVLLSRNKDFLVFYRGKNFL 520

Query: 1711 SPXXXXXXXXXXXXXXXXQDEEEKARLRASDLLTAGVATINSSRTAGTLGETLDADARWG 1890
            S                 QDEEE+ARLRAS ++   +       TAGTLGETLDADA+WG
Sbjct: 521  SAEVTEALVERERLAKSLQDEEEQARLRASAMVMPSIEPAQHFGTAGTLGETLDADAKWG 580

Query: 1891 KRLDDKDKENVMREAEIVRHGNLVRKLEKKLAFAERKLMKAERVLSKVEETLNPLDRRAE 2070
            KRLD   KE V +EA I+RH  LVRKLE+KLAFAERKLM AE+ LSKVEE+L P  ++A+
Sbjct: 581  KRLDVHHKEKVTQEAGILRHAKLVRKLEQKLAFAERKLMGAEQALSKVEESLKPSKQQAD 640

Query: 2071 PDSLTDEER 2097
            P+S+TDEER
Sbjct: 641  PESITDEER 649


>gb|EXB29861.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Morus
            notabilis]
          Length = 878

 Score =  650 bits (1676), Expect = 0.0
 Identities = 355/675 (52%), Positives = 443/675 (65%), Gaps = 19/675 (2%)
 Frame = +1

Query: 130  MALVPSHQLYPRT-------ARLSFLRHTSSTPFKKPNLH-TPHDVVNQDCVFKKNPPKR 285
            MALVPS Q YP +         + F R+ SS  F+K  L+ T +  VN     ++NP  +
Sbjct: 1    MALVPSRQFYPTSFFDSLHGTHIKFFRYGSSITFRKHRLYSTKYSSVNSSSSSEQNPGGK 60

Query: 286  SN-FVVKNSSKRWNLSTISPNXXXXXXXXXXXVFGSSWLGKWNETHNEINPKKPQIVLNY 462
             N F     +  W+                  +  +SW+ KWNETH +I PK P  VL+Y
Sbjct: 61   YNKFFRTTQNNNWH------------NKYDDNLSSTSWIEKWNETHQQIRPKPPGAVLDY 108

Query: 463  RXXXXXXXXXXXXXXXXXXX-------MDRIVEKLKKFGYADETTEKDKMVK--RDAEKG 615
            R                          M+RIVEKLKKFGY D+   + K  K  R  EKG
Sbjct: 109  RNSESGNQPRSSYANRNGGDNNSGGSTMERIVEKLKKFGYMDDVGSEGKEDKGERVIEKG 168

Query: 616  SIEDIFFVEEGILPNVRGGFSKESPFGDENVIAKDG-VVKFPWEKPLVXXXXXXXXXXXX 792
            S+EDIF+VEEG+LPN RGGFS +SP G E V   +G  V+FPWEKP              
Sbjct: 169  SVEDIFYVEEGMLPNPRGGFSPDSPLGVEGVFGGNGGEVRFPWEKPKEKVEKEGGSMRRR 228

Query: 793  XRTHLAELTLPASELRRLTNLALRIKNKTRITGAGVTQQVVETIREKWNTSEVVRLKVEG 972
             +T LAELTLP SELRRL NL  + K+KTRI GAGVTQ+VV+ I E+W T E+VRLK+EG
Sbjct: 229  SKTSLAELTLPESELRRLRNLTFQKKHKTRIGGAGVTQEVVDMIHERWKTLEIVRLKIEG 288

Query: 973  APALNMKRMHEILERKTGGLVIWRSGTSVALYRGVGYEIPSDRMKKRIMRRDEIRHKNVP 1152
            APALNMKRMHEILERKTGGLV+WRSGTS++LYRGV Y++PS  +KKR+ ++ EI   ++ 
Sbjct: 289  APALNMKRMHEILERKTGGLVVWRSGTSLSLYRGVSYQVPSLELKKRLYKKPEI--SSIQ 346

Query: 1153 IVDEESNQNPSEVSPYNAVDSLRTDSANTSEENHNSVRQTEVNYEDEVEKLLDGLGPRYT 1332
             V ++S ++ ++ +P    D+    S + S+E  +  R  EV YEDE++K+LDGLGPRY 
Sbjct: 347  TVGDKSTRDLAKFAPDTNTDTAIEKSESPSQEKKDVERSPEVKYEDEIDKILDGLGPRYE 406

Query: 1333 DWPGPGPLPVDADLLPGIVPGYQPPFRILPYGVRSXXXXXXXXXXXXXXXVLPPHFALGR 1512
            DWPG    PVDAD+LP IVPGYQPPFRILP+GVR                VLPPHFA+GR
Sbjct: 407  DWPGSDISPVDADMLPSIVPGYQPPFRILPFGVRPSLGPKEATSLRRLARVLPPHFAVGR 466

Query: 1513 SRQHQGLASAMIKLWQRSSIAKIAIKRGVQLTTSERMAEDIKKVTGGMLLSRNKDFLVFY 1692
            +RQ QGLA AMI LW++S IAKIA+KRGVQLTTSERM E+IKK+TGG+LLSRNKDFLVFY
Sbjct: 467  NRQLQGLAVAMINLWEKSLIAKIALKRGVQLTTSERMVEEIKKLTGGVLLSRNKDFLVFY 526

Query: 1693 RGKDFLSPXXXXXXXXXXXXXXXXQDEEEKARLRASDLLTAGVATINSSRTAGTLGETLD 1872
            RGK+FLSP                QDEEE+ARLRAS ++           +AGTLGETLD
Sbjct: 527  RGKNFLSPEVTKALLERERLAKSLQDEEEQARLRASAIIVPRTEVTEQPGSAGTLGETLD 586

Query: 1873 ADARWGKRLDDKDKENVMREAEIVRHGNLVRKLEKKLAFAERKLMKAERVLSKVEETLNP 2052
            A+A+WGKRLD++ K+ VMR+AEI RH NLVRKLEKKLAF+ERKLMKAER L+KVE+ L P
Sbjct: 587  ANAKWGKRLDNRHKKEVMRQAEISRHANLVRKLEKKLAFSERKLMKAERALAKVEQFLQP 646

Query: 2053 LDRRAEPDSLTDEER 2097
             +R+A+P+S+T+EER
Sbjct: 647  ANRQADPESITNEER 661


>emb|CAN79523.1| hypothetical protein VITISV_010525 [Vitis vinifera]
          Length = 902

 Score =  649 bits (1674), Expect = 0.0
 Identities = 357/673 (53%), Positives = 444/673 (65%), Gaps = 17/673 (2%)
 Frame = +1

Query: 130  MALVPSHQLYPRTA---------RLSFLRHTSSTPFKKPNLHTPHDVVNQDCVFKKNPPK 282
            MAL+PS Q YP T          RL F R+ SS  F+  + +   + +  +     NP +
Sbjct: 1    MALLPSRQFYPTTTSFLDSFHSTRLQFFRYGSSNRFRTHSSYVTRNTIASNST---NPQR 57

Query: 283  RSNFVVKNSS-KRWNLSTISPNXXXXXXXXXXXVFGSSWLGKWNETHNEINPKKPQIVLN 459
            +SN V  N+   +++   +S +             G +W+ KWN  H + +PK+ + V+N
Sbjct: 58   KSNIVFTNTPVSQYDSGGVSSS-------------GGNWIDKWNGPHQKSHPKEXRPVMN 104

Query: 460  YRXXXXXXXXXXXXXXXXXXXMDRIVEKLKKFGYADETTE-KDKMVKRDAEKGSIEDIFF 636
            YR                   M++IVEKLKKFGY D+  E K+ + +R  EKGSIEDIF+
Sbjct: 105  YRNSETVSRSDGGSGGGST--MEKIVEKLKKFGYMDDVKETKENVQERIIEKGSIEDIFY 162

Query: 637  VEEGILPNVRGGFSKESPFGDENVIAKDGVVKFPWEKPLVXXXXXXXXXXXXXRTHLAEL 816
            +EEGILPN +GGFS +SP G EN    +G V+FPWE+P V             RT LAEL
Sbjct: 163  IEEGILPNPQGGFSLDSPLGVENKGDGNGEVRFPWERPKVEEGSVRIKS----RTSLAEL 218

Query: 817  TLPASELRRLTNLALRIKNKTRITGAGVTQQVVETIREKWNTSEVVRLKVEGAPALNMKR 996
            TLP SELRRL NL +R KNKT+I G GVTQ VV+ IREKW TSE+V+LK EGA ALNM+R
Sbjct: 219  TLPESELRRLRNLTMRTKNKTKIGGGGVTQAVVDMIREKWKTSEIVKLKCEGAAALNMRR 278

Query: 997  MHEILERKTGGLVIWRSGTSVALYRGVGYEIPSDRMKKRIMRRDEIRHKNVPIVDEESNQ 1176
            +HEILERKTGGLVIWRSGTSV+LYRGV YE+P  ++ KR+ +++E  H +   +   S  
Sbjct: 279  IHEILERKTGGLVIWRSGTSVSLYRGVSYEVPV-QLNKRVYKKNETSHSSFSSITPNSFA 337

Query: 1177 NPSEVSPYNAVDSLRTDSANTSE------ENHNSVRQTEVNYEDEVEKLLDGLGPRYTDW 1338
              S  +  NA       + + S+      +  N   ++EV YEDE++KLLDGLGPRYTDW
Sbjct: 338  ISSNKTSGNAPAVGSNQNVHASQATLXITDGENKDTESEVKYEDEIDKLLDGLGPRYTDW 397

Query: 1339 PGPGPLPVDADLLPGIVPGYQPPFRILPYGVRSXXXXXXXXXXXXXXXVLPPHFALGRSR 1518
            P   PLP+DADLLPG + GYQPPFRILPYGVRS               VLPPHFALGRSR
Sbjct: 398  PXCDPLPIDADLLPGKIHGYQPPFRILPYGVRSSLGLKEATALRRLARVLPPHFALGRSR 457

Query: 1519 QHQGLASAMIKLWQRSSIAKIAIKRGVQLTTSERMAEDIKKVTGGMLLSRNKDFLVFYRG 1698
            Q +GLA AMIKLW+RSSIAK+A+KRGVQLTTSERMAEDIKK+TGG+LLSRNKDFLVFYRG
Sbjct: 458  QLEGLAMAMIKLWERSSIAKVALKRGVQLTTSERMAEDIKKLTGGVLLSRNKDFLVFYRG 517

Query: 1699 KDFLSPXXXXXXXXXXXXXXXXQDEEEKARLRASDLLTAGVATINSSRTAGTLGETLDAD 1878
            K+FLS                 QDEEE+ARLRAS L+T  V       +AGTLGETL+AD
Sbjct: 518  KNFLSSDVTEALLERERLAKALQDEEEQARLRASTLITPTVGITEQVGSAGTLGETLEAD 577

Query: 1879 ARWGKRLDDKDKENVMREAEIVRHGNLVRKLEKKLAFAERKLMKAERVLSKVEETLNPLD 2058
            ARWGKRLDD DK+ ++++AE+ RH NLVRKLE++LA AERKLMKAE  LSKVEE L P +
Sbjct: 578  ARWGKRLDDHDKQKMLKKAEVARHANLVRKLERRLALAERKLMKAENALSKVEEFLKPAN 637

Query: 2059 RRAEPDSLTDEER 2097
            R A+P+S+TDEER
Sbjct: 638  RPADPESITDEER 650


>ref|XP_006489518.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Citrus sinensis]
          Length = 933

 Score =  648 bits (1672), Expect = 0.0
 Identities = 370/696 (53%), Positives = 438/696 (62%), Gaps = 40/696 (5%)
 Frame = +1

Query: 130  MALVPSHQLYPRTARLSFLRHTSSTPFKKPNLH---TPHDVVNQDCVFKKNPPKRSNFVV 300
            MALVPS Q  P TA     + +S + F   + H     H +  ++  F +N    S    
Sbjct: 1    MALVPSRQFCPATAIFDSFQ-SSFSKFHGTHFHFFRCGHSIPLKNRFFYQNFSSNSAHEK 59

Query: 301  KNSSKRWNLSTISPNXXXXXXXXXXXVFGSSWLGKWNETHNEINPKKPQIVLNYRXXXXX 480
                K  + ST +                SSWL KWN+ +     K PQ  +NYR     
Sbjct: 60   NPPRKTCSFSTNNFFSQHDKDDNANLCSSSSWLVKWNKPNKYNRLKPPQASVNYRKNNVD 119

Query: 481  XXXXXXXXXXXXXX-----------MDRIVEKLKKFGYA-------DETTEKDKMVKRDA 606
                                     M +IVEKLKKFGY        D    + +  +R  
Sbjct: 120  LSALGFARTDSDGNGVGGVDDGGNTMGKIVEKLKKFGYVGDGDGDGDNDERRGQGKERVI 179

Query: 607  EKGSIEDIFFVEEGILPNVRGGFSKESPFGDENVIAKDGVVKFPWEKPLVXXXXXXXXXX 786
            EKGSIEDIF+VEEG+LPN RGGFSKESP G    +  DG VKFPWEK             
Sbjct: 180  EKGSIEDIFYVEEGLLPNARGGFSKESPLGLGEEVGSDGEVKFPWEKRKEEVAEGRWLVK 239

Query: 787  XXXRTHLAELTLPASELRRLTNLALRIKNKTRITGAGVTQQVVETIREKWNTSEVVRLKV 966
               RT LAELTLP SELRRL NL  + K+KTRI GAG+TQ VV+ I EKW TSE+VRLK+
Sbjct: 240  RSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKI 299

Query: 967  EGAPALNMKRMHEILERKTGGLVIWRSGTSVALYRGVGYEIPSDRMKKRIMRRDEIR--- 1137
            EGAPALNMKRMHEILERKTGGLVIWRSGT+V+LYRGV YE+PS ++ KRI +R+E+    
Sbjct: 300  EGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQLNKRIYKRNELPASS 359

Query: 1138 ---------HKNVPI-------VDEESNQNPSEVSPYNAVDSLRTDSANTSEENHNSVRQ 1269
                     HK + +         +++ Q+PS    YN V + + +    SEE      +
Sbjct: 360  VSQATDKQIHKQISMSGNSLSAAADKTAQDPSNFDSYNNVHATQVNLETASEEQETDFVR 419

Query: 1270 TEVNYEDEVEKLLDGLGPRYTDWPGPGPLPVDADLLPGIVPGYQPPFRILPYGVRSXXXX 1449
             EV YEDEVEKLLDGLGPRYTDWPG  PLPVDAD+LPGIVPGYQPPFR+LPYGVRS    
Sbjct: 420  -EVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLAR 478

Query: 1450 XXXXXXXXXXXVLPPHFALGRSRQHQGLASAMIKLWQRSSIAKIAIKRGVQLTTSERMAE 1629
                       VLPPHFALGRSRQ QGLA AMIKLW++SSIAKIA+KRGVQLTTSERM E
Sbjct: 479  KEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVE 538

Query: 1630 DIKKVTGGMLLSRNKDFLVFYRGKDFLSPXXXXXXXXXXXXXXXXQDEEEKARLRASDLL 1809
            DIKK+TGG LLSRNKDFLVFYRGK+FLSP                QDEEE+ARLRAS  +
Sbjct: 539  DIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFV 598

Query: 1810 TAGVATINSSRTAGTLGETLDADARWGKRLDDKDKENVMREAEIVRHGNLVRKLEKKLAF 1989
               + TI  S TAGTL ETLDA++RWGKRLDD  KEN++REAE+ RH  LV+KLEKKLA 
Sbjct: 599  LPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLAR 658

Query: 1990 AERKLMKAERVLSKVEETLNPLDRRAEPDSLTDEER 2097
            AERKL++AER LSKVEE+L P +R+A+P+S+TDEER
Sbjct: 659  AERKLLRAERALSKVEESLKPAERQADPESITDEER 694


>ref|XP_006420115.1| hypothetical protein CICLE_v10004262mg [Citrus clementina]
            gi|557521988|gb|ESR33355.1| hypothetical protein
            CICLE_v10004262mg [Citrus clementina]
          Length = 934

 Score =  640 bits (1652), Expect = 0.0
 Identities = 369/697 (52%), Positives = 437/697 (62%), Gaps = 41/697 (5%)
 Frame = +1

Query: 130  MALVPSHQLYPRTARLSFLRHTSSTPFKKPNLH---TPHDVVNQDCVFKKNPPKRSNFVV 300
            MALVPS Q  P TA     + +S + F   + H     H +  ++  F +N    S    
Sbjct: 1    MALVPSRQFCPATAIFDSFQ-SSFSKFHGTHFHFFRCGHSIPLKNHFFYQNFSSNSAHEK 59

Query: 301  KNSSKRWNLSTISPNXXXXXXXXXXXVFGSSWLGKWNETHNEINPKKPQIVLNYRXXXXX 480
                K  + ST +                SSWL KWN+ +     K PQ  +NYR     
Sbjct: 60   NTPRKICSFSTNNFFSQHDKDDNANLCSSSSWLVKWNKPNKYNRLKPPQASVNYRKNNVD 119

Query: 481  XXXXXXXXXXXXXX-----------MDRIVEKLKKFGYA-------DETTEKDKMVKRDA 606
                                     M +IVEKLKKFGY        D    + +  +R  
Sbjct: 120  LSALGFARTDSDGNGVGGVDDGGSTMGKIVEKLKKFGYVGDGDGDGDNDERRGQGKERVI 179

Query: 607  EKGSIEDIFFVEEGILPNVRGGFSKESPFGDENVIAKDGVVKFPWEKPLVXXXXXXXXXX 786
            EKGSIEDIF+VEEG+LPN RGGFSKESP G    +  DG VKFPWEK             
Sbjct: 180  EKGSIEDIFYVEEGLLPNARGGFSKESPLGLGEEVGSDGEVKFPWEKRKEEVAEGRWLVK 239

Query: 787  XXX-RTHLAELTLPASELRRLTNLALRIKNKTRITGAGVTQQVVETIREKWNTSEVVRLK 963
                RT LAELTLP SELRRL NL  + K+KTRI GAG+TQ VV+ I EKW TSE+VRLK
Sbjct: 240  RRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLK 299

Query: 964  VEGAPALNMKRMHEILERKTGGLVIWRSGTSVALYRGVGYEIPSDRMKKRIMRRDEIR-- 1137
            +EGAPALNMKRMHEILERKTGGLVIWRSGT+V+LYRGV YE+PS ++ KRI +R+E+   
Sbjct: 300  IEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQLNKRIYKRNELPAS 359

Query: 1138 ----------HKNVPI-------VDEESNQNPSEVSPYNAVDSLRTDSANTSEENHNSVR 1266
                      HK + +         +++ Q+PS    YN V   + +    SEE      
Sbjct: 360  SVSQATDKQIHKQISMSGNSLSAAADKTAQDPSNFDSYNNVHVTQVNLETASEEQETDFV 419

Query: 1267 QTEVNYEDEVEKLLDGLGPRYTDWPGPGPLPVDADLLPGIVPGYQPPFRILPYGVRSXXX 1446
            + EV YEDEVEKLLDGLGPRYTDWPG  PLPVDAD+LPGIVPGYQPPFR+LPYGVRS   
Sbjct: 420  R-EVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLA 478

Query: 1447 XXXXXXXXXXXXVLPPHFALGRSRQHQGLASAMIKLWQRSSIAKIAIKRGVQLTTSERMA 1626
                        VLPPHFALGRSRQ QGLA AMIKLW++SSIAKIA+KRGVQLTTSERM 
Sbjct: 479  RKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMV 538

Query: 1627 EDIKKVTGGMLLSRNKDFLVFYRGKDFLSPXXXXXXXXXXXXXXXXQDEEEKARLRASDL 1806
            EDIKK+TGG LLSRNKDFLVFYRGK+FLSP                QDEEE+ARLRAS  
Sbjct: 539  EDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAF 598

Query: 1807 LTAGVATINSSRTAGTLGETLDADARWGKRLDDKDKENVMREAEIVRHGNLVRKLEKKLA 1986
            +   + TI  S TAGTL ETLDA++RWGKRLDD  KEN++REAE+ RH  LV+KLEKKLA
Sbjct: 599  VLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLA 658

Query: 1987 FAERKLMKAERVLSKVEETLNPLDRRAEPDSLTDEER 2097
             AERKL++AER LSKVEE+L P +R+A+P+S+T+EER
Sbjct: 659  RAERKLLRAERALSKVEESLKPAERQADPESITNEER 695


>ref|XP_006420114.1| hypothetical protein CICLE_v10004262mg [Citrus clementina]
            gi|557521987|gb|ESR33354.1| hypothetical protein
            CICLE_v10004262mg [Citrus clementina]
          Length = 860

 Score =  640 bits (1652), Expect = 0.0
 Identities = 369/697 (52%), Positives = 437/697 (62%), Gaps = 41/697 (5%)
 Frame = +1

Query: 130  MALVPSHQLYPRTARLSFLRHTSSTPFKKPNLH---TPHDVVNQDCVFKKNPPKRSNFVV 300
            MALVPS Q  P TA     + +S + F   + H     H +  ++  F +N    S    
Sbjct: 1    MALVPSRQFCPATAIFDSFQ-SSFSKFHGTHFHFFRCGHSIPLKNHFFYQNFSSNSAHEK 59

Query: 301  KNSSKRWNLSTISPNXXXXXXXXXXXVFGSSWLGKWNETHNEINPKKPQIVLNYRXXXXX 480
                K  + ST +                SSWL KWN+ +     K PQ  +NYR     
Sbjct: 60   NTPRKICSFSTNNFFSQHDKDDNANLCSSSSWLVKWNKPNKYNRLKPPQASVNYRKNNVD 119

Query: 481  XXXXXXXXXXXXXX-----------MDRIVEKLKKFGYA-------DETTEKDKMVKRDA 606
                                     M +IVEKLKKFGY        D    + +  +R  
Sbjct: 120  LSALGFARTDSDGNGVGGVDDGGSTMGKIVEKLKKFGYVGDGDGDGDNDERRGQGKERVI 179

Query: 607  EKGSIEDIFFVEEGILPNVRGGFSKESPFGDENVIAKDGVVKFPWEKPLVXXXXXXXXXX 786
            EKGSIEDIF+VEEG+LPN RGGFSKESP G    +  DG VKFPWEK             
Sbjct: 180  EKGSIEDIFYVEEGLLPNARGGFSKESPLGLGEEVGSDGEVKFPWEKRKEEVAEGRWLVK 239

Query: 787  XXX-RTHLAELTLPASELRRLTNLALRIKNKTRITGAGVTQQVVETIREKWNTSEVVRLK 963
                RT LAELTLP SELRRL NL  + K+KTRI GAG+TQ VV+ I EKW TSE+VRLK
Sbjct: 240  RRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLK 299

Query: 964  VEGAPALNMKRMHEILERKTGGLVIWRSGTSVALYRGVGYEIPSDRMKKRIMRRDEIR-- 1137
            +EGAPALNMKRMHEILERKTGGLVIWRSGT+V+LYRGV YE+PS ++ KRI +R+E+   
Sbjct: 300  IEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQLNKRIYKRNELPAS 359

Query: 1138 ----------HKNVPI-------VDEESNQNPSEVSPYNAVDSLRTDSANTSEENHNSVR 1266
                      HK + +         +++ Q+PS    YN V   + +    SEE      
Sbjct: 360  SVSQATDKQIHKQISMSGNSLSAAADKTAQDPSNFDSYNNVHVTQVNLETASEEQETDFV 419

Query: 1267 QTEVNYEDEVEKLLDGLGPRYTDWPGPGPLPVDADLLPGIVPGYQPPFRILPYGVRSXXX 1446
            + EV YEDEVEKLLDGLGPRYTDWPG  PLPVDAD+LPGIVPGYQPPFR+LPYGVRS   
Sbjct: 420  R-EVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLA 478

Query: 1447 XXXXXXXXXXXXVLPPHFALGRSRQHQGLASAMIKLWQRSSIAKIAIKRGVQLTTSERMA 1626
                        VLPPHFALGRSRQ QGLA AMIKLW++SSIAKIA+KRGVQLTTSERM 
Sbjct: 479  RKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMV 538

Query: 1627 EDIKKVTGGMLLSRNKDFLVFYRGKDFLSPXXXXXXXXXXXXXXXXQDEEEKARLRASDL 1806
            EDIKK+TGG LLSRNKDFLVFYRGK+FLSP                QDEEE+ARLRAS  
Sbjct: 539  EDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAF 598

Query: 1807 LTAGVATINSSRTAGTLGETLDADARWGKRLDDKDKENVMREAEIVRHGNLVRKLEKKLA 1986
            +   + TI  S TAGTL ETLDA++RWGKRLDD  KEN++REAE+ RH  LV+KLEKKLA
Sbjct: 599  VLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLA 658

Query: 1987 FAERKLMKAERVLSKVEETLNPLDRRAEPDSLTDEER 2097
             AERKL++AER LSKVEE+L P +R+A+P+S+T+EER
Sbjct: 659  RAERKLLRAERALSKVEESLKPAERQADPESITNEER 695


>ref|XP_002517017.1| conserved hypothetical protein [Ricinus communis]
            gi|223543652|gb|EEF45180.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 773

 Score =  626 bits (1615), Expect = e-176
 Identities = 329/531 (61%), Positives = 390/531 (73%), Gaps = 6/531 (1%)
 Frame = +1

Query: 523  MDRIVEKLKKFGYAD---ETTEKDKMVKRDAEKGSIEDIFFVEEGILPNVRGGFSKESPF 693
            M++IVEKLKK GY D   +  +K+K ++R  +KGS+EDIF+VEEG LPN RGGFSKESP 
Sbjct: 1    MEKIVEKLKKHGYIDGNVDEKKKEKTLERVIQKGSVEDIFYVEEGNLPNSRGGFSKESPL 60

Query: 694  GDENVIAKDGVVKFPWEKPL--VXXXXXXXXXXXXXRTHLAELTLPASELRRLTNLALRI 867
            G E+V   +G V+FPWEKP                 RT LAELTLP SELRRL NL  +I
Sbjct: 61   GVEDVFKSNGEVRFPWEKPKREELEHEKKWTARSKSRTQLAELTLPESELRRLRNLTYQI 120

Query: 868  KNKTRITGAGVTQQVVETIREKWNTSEVVRLKVEGAPALNMKRMHEILERKTGGLVIWRS 1047
            K+K R+ GAGVTQ+VV++I ++W TSE+VR+KVEGAPALNM+RMHEILERKTGGLVIWRS
Sbjct: 121  KSKVRVKGAGVTQEVVDSIHDRWKTSEIVRVKVEGAPALNMRRMHEILERKTGGLVIWRS 180

Query: 1048 GTSVALYRGVGYEIPSDRMKKRIMRRDEIRHKNVPIVDEE-SNQNPSEVSPYNAVDSLRT 1224
            GTSV+LYRGV YE PS ++ K+I++R+E+ + ++        + + S  S    +  L +
Sbjct: 181  GTSVSLYRGVSYEDPSVQLNKQILKRNELSNNSLSTATGIIRSPSKSAASSDLNMPHLNS 240

Query: 1225 DSANTSEENHNSVRQTEVNYEDEVEKLLDGLGPRYTDWPGPGPLPVDADLLPGIVPGYQP 1404
            DS    EE      +TEV YEDEV+KLL+GLGPRYTDW G  PLPVDAD+LPGI+PGYQP
Sbjct: 241  DSTAEGEEKKEIEMETEVKYEDEVDKLLEGLGPRYTDWAGLDPLPVDADMLPGIIPGYQP 300

Query: 1405 PFRILPYGVRSXXXXXXXXXXXXXXXVLPPHFALGRSRQHQGLASAMIKLWQRSSIAKIA 1584
            PFRILPYGVRS               +LPPHFALGRSRQ QGLA AMIKLW++SSIAKI+
Sbjct: 301  PFRILPYGVRSSLGQKEATSLRRLARILPPHFALGRSRQLQGLADAMIKLWEKSSIAKIS 360

Query: 1585 IKRGVQLTTSERMAEDIKKVTGGMLLSRNKDFLVFYRGKDFLSPXXXXXXXXXXXXXXXX 1764
            +KRGVQLTTSERMAEDIKK+TGGMLLSRNKDFLVFYRGKDFLSP                
Sbjct: 361  LKRGVQLTTSERMAEDIKKLTGGMLLSRNKDFLVFYRGKDFLSPEVTEALVERERLAQSL 420

Query: 1765 QDEEEKARLRASDLLTAGVATINSSRTAGTLGETLDADARWGKRLDDKDKENVMREAEIV 1944
            QD+EE+ARLRAS L      T+    TAGTL ETLDADARWGK LD   +E +MREAEI 
Sbjct: 421  QDKEEQARLRASALFVQTAETLEQPGTAGTLEETLDADARWGKCLDQNHREKIMREAEIA 480

Query: 1945 RHGNLVRKLEKKLAFAERKLMKAERVLSKVEETLNPLDRRAEPDSLTDEER 2097
            RH NLVRKLE KLAFAE+KLMKAER LSKVE  L P +R+A+P+S+TDEER
Sbjct: 481  RHANLVRKLESKLAFAEKKLMKAERALSKVEVFLKPAERQADPESITDEER 531


>gb|EOY05903.1| CRM family member 3A isoform 4 [Theobroma cacao]
          Length = 645

 Score =  618 bits (1593), Expect = e-174
 Identities = 345/631 (54%), Positives = 404/631 (64%), Gaps = 11/631 (1%)
 Frame = +1

Query: 130  MALVPSHQLYPRTARLSFLRHTSSTPFKKPNLHTPHDVVNQDCVFKKN--PPKRSNFVVK 303
            M L+P+ Q +P T   S    +  T   K      H +    C +  +  P K S     
Sbjct: 1    MTLLPTRQFHPATTTKSTFLDSFQTRLSKF-----HGLPLPFCSYDSSNFPLKTSTLYAA 55

Query: 304  NSSKRWN-LSTISPNXXXXXXXXXXXVFGSSWLGKWNETHNEINPKKPQIVLNYRXXXXX 480
            N +   N L    P             F S+WL  WN+TH    PK P+ V NYR     
Sbjct: 56   NYTVTSNSLFHQYPKSKTKAFPTKDPTFRSNWLDSWNKTHKGFGPKPPKTVFNYRKKGDV 115

Query: 481  XXXXXXXXXXXXXX----MDRIVEKLKKFGYADETTEK----DKMVKRDAEKGSIEDIFF 636
                              M++IVEKLKKFGY  E  E+    ++  KR  E+GSIEDIF+
Sbjct: 116  WSLSYSQSDNNGRSSSSTMEKIVEKLKKFGYIGEENEQKEKGEEEPKRVIERGSIEDIFY 175

Query: 637  VEEGILPNVRGGFSKESPFGDENVIAKDGVVKFPWEKPLVXXXXXXXXXXXXXRTHLAEL 816
            VEEG+LPN RGGFSKESP G ENV   DG V+FPWEK                +T LAEL
Sbjct: 176  VEEGMLPNNRGGFSKESPLGMENVFGSDGEVRFPWEKRKEDEEEGGWTARRDSKTSLAEL 235

Query: 817  TLPASELRRLTNLALRIKNKTRITGAGVTQQVVETIREKWNTSEVVRLKVEGAPALNMKR 996
            TLP SELRRL NL  R K+K RI GAGVTQ+VV+TI EKW T E+VRLK+EGAPALNMKR
Sbjct: 236  TLPESELRRLRNLTFRTKSKVRIKGAGVTQEVVDTIHEKWKTEEIVRLKIEGAPALNMKR 295

Query: 997  MHEILERKTGGLVIWRSGTSVALYRGVGYEIPSDRMKKRIMRRDEIRHKNVPIVDEESNQ 1176
            MHEILERKTGGLVIWRSGTSV+LYRGV YE+PS  + KRI +R+E     +P V +++ +
Sbjct: 296  MHEILERKTGGLVIWRSGTSVSLYRGVSYEVPSVHLSKRIYKRNETFTYALPSVSDKT-K 354

Query: 1177 NPSEVSPYNAVDSLRTDSANTSEENHNSVRQTEVNYEDEVEKLLDGLGPRYTDWPGPGPL 1356
            + S +  +  V S + +S   +E N ++    E+ YEDEV+KLL+GLGPRYTDWPG  PL
Sbjct: 355  DLSSLGSHKDVVSPQANSETAAEGNKDTESLPEIRYEDEVDKLLEGLGPRYTDWPGCNPL 414

Query: 1357 PVDADLLPGIVPGYQPPFRILPYGVRSXXXXXXXXXXXXXXXVLPPHFALGRSRQHQGLA 1536
            PVDADLLPGIV GYQPPFR+LPYGVRS               VLPPHFA+GRSRQ QGLA
Sbjct: 415  PVDADLLPGIVAGYQPPFRVLPYGVRSSLGLKEATSLRRLARVLPPHFAIGRSRQLQGLA 474

Query: 1537 SAMIKLWQRSSIAKIAIKRGVQLTTSERMAEDIKKVTGGMLLSRNKDFLVFYRGKDFLSP 1716
             AMIKLW++SSIAKIA+KRGVQLTTSERMAEDIKK+TGGMLLSRNKDFLVFYRGK+FLS 
Sbjct: 475  VAMIKLWEKSSIAKIALKRGVQLTTSERMAEDIKKLTGGMLLSRNKDFLVFYRGKNFLSA 534

Query: 1717 XXXXXXXXXXXXXXXXQDEEEKARLRASDLLTAGVATINSSRTAGTLGETLDADARWGKR 1896
                            QDEEE+ARLRAS  L         S  AGTLGETLDADARWGKR
Sbjct: 535  DVAEALVERERLAKSLQDEEEQARLRASAFLVPSTEVAEQSGAAGTLGETLDADARWGKR 594

Query: 1897 LDDKDKENVMREAEIVRHGNLVRKLEKKLAF 1989
            LD+  KE VM+EAEI+RH NLVRKL+K LAF
Sbjct: 595  LDNHHKEKVMKEAEILRHANLVRKLDKNLAF 625


>ref|XP_004134094.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Cucumis sativus]
            gi|449504099|ref|XP_004162252.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Cucumis sativus]
          Length = 874

 Score =  608 bits (1569), Expect = e-171
 Identities = 336/587 (57%), Positives = 397/587 (67%), Gaps = 18/587 (3%)
 Frame = +1

Query: 391  SWLGKWNETHNEINPKKPQIVLNYRXXXXXXXXXXXXXXXXXXX--------------MD 528
            SW+ +WNET     PK P+ VL+Y                                  M+
Sbjct: 82   SWIDRWNETAKRNRPKPPRAVLDYPSSDENEVSISSTGFSKSYRASSRIDDDGRGGSTME 141

Query: 529  RIVEKLKKFGYADETTEKDKMVKRDAEKGSIEDIFFVEEGILPNVRGGFSKESPFGDENV 708
            +IV KLKKFGY D+   K+K  +R  EKGS+EDI ++EEG+LPN RGGFSKESP GDEN+
Sbjct: 142  KIVRKLKKFGYIDDEN-KEKGEERAIEKGSVEDILYIEEGMLPNTRGGFSKESPMGDENM 200

Query: 709  IAKDGVVKFPWEKPLVXXXXXXXXXXXXXRTHLAELTLPASELRRLTNLALRIKNKTRIT 888
               DG V+FPWEKP                + LA+LTLP  ELRRL NL  + ++K +I 
Sbjct: 201  FGSDGEVRFPWEKPKEKEDTHGDSTRRGSAS-LAQLTLPEPELRRLRNLTFQKRHKMKIG 259

Query: 889  GAGVTQQVVETIREKWNTSEVVRLKVEGAPALNMKRMHEILERKTGGLVIWRSGTSVALY 1068
            G GVTQ VV+ I EKW +SE+VRLK+ G PALNMKRMHEILERKTGGLVIWRSGTS++LY
Sbjct: 260  GGGVTQAVVDVIHEKWKSSEIVRLKILGPPALNMKRMHEILERKTGGLVIWRSGTSLSLY 319

Query: 1069 RGVGYEIP-SDRMKKRIMRRDEIRHKNVPIVDEESNQNPSEVSPYNAVDSLRTDSANTSE 1245
            RGV YE+P + +  KRI +R+EI    +P     S   PSE S +  V +L+   A TS 
Sbjct: 320  RGVSYELPEAPQFNKRIYKRNEI--TALPKTG-ASTIAPSESSSHRNVYALQQKRAETSI 376

Query: 1246 ENHNSVRQ---TEVNYEDEVEKLLDGLGPRYTDWPGPGPLPVDADLLPGIVPGYQPPFRI 1416
            E  +   Q    +VNYEDEV KLLDGLGPRYTDWPG  PLPVDAD+LPG+VP Y+PPFRI
Sbjct: 377  EGEHCSEQLTKVQVNYEDEVNKLLDGLGPRYTDWPGLDPLPVDADMLPGVVPDYEPPFRI 436

Query: 1417 LPYGVRSXXXXXXXXXXXXXXXVLPPHFALGRSRQHQGLASAMIKLWQRSSIAKIAIKRG 1596
            LPYGVRS                LPPHFALGR+RQ QGLA AM KLW+RS IAKIA+KRG
Sbjct: 437  LPYGVRSSIGVKEATALKRLARRLPPHFALGRNRQLQGLAIAMTKLWERSLIAKIALKRG 496

Query: 1597 VQLTTSERMAEDIKKVTGGMLLSRNKDFLVFYRGKDFLSPXXXXXXXXXXXXXXXXQDEE 1776
            VQLTTSERMAE+IKK+TGGMLLSRNKDFLVFYRGK FLSP                QD+E
Sbjct: 497  VQLTTSERMAEEIKKLTGGMLLSRNKDFLVFYRGKSFLSPEVTEALLERERLAKSLQDKE 556

Query: 1777 EKARLRASDLLTAGVATINSSRTAGTLGETLDADARWGKRLDDKDKENVMREAEIVRHGN 1956
            E+ARL+AS  +   +     S TAG+L ETLDADARWGK LDDK KENVMREAE +RH +
Sbjct: 557  EQARLKASAFVVP-IEKTEQSGTAGSLEETLDADARWGKALDDKHKENVMREAEQLRHTD 615

Query: 1957 LVRKLEKKLAFAERKLMKAERVLSKVEETLNPLDRRAEPDSLTDEER 2097
            LVRKLE+KLAFAERKL+KAER L+KVE  + P  R+AEPDS+T+EER
Sbjct: 616  LVRKLERKLAFAERKLVKAERTLAKVEAFMTPAKRQAEPDSITEEER 662


>ref|XP_003556362.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Glycine max]
          Length = 835

 Score =  596 bits (1537), Expect = e-167
 Identities = 320/576 (55%), Positives = 389/576 (67%), Gaps = 8/576 (1%)
 Frame = +1

Query: 394  WLGKWNE-THNEINPKKPQIVLNY-------RXXXXXXXXXXXXXXXXXXXMDRIVEKLK 549
            WL +WN+ T+N   PK P  VL+Y       +                   MDRIVEKLK
Sbjct: 64   WLKRWNDPTNNHARPKPPCAVLDYSENGHASKSGLASSDEEGGDGNTGGSTMDRIVEKLK 123

Query: 550  KFGYADETTEKDKMVKRDAEKGSIEDIFFVEEGILPNVRGGFSKESPFGDENVIAKDGVV 729
            KFGY ++  +  + V    EKGS+EDIF+VEEG+LPN RGGFS ESP G  +  + D  V
Sbjct: 124  KFGYVEDGIQNKERV---IEKGSVEDIFYVEEGMLPNSRGGFSSESPLGFGSFGSDDREV 180

Query: 730  KFPWEKPLVXXXXXXXXXXXXXRTHLAELTLPASELRRLTNLALRIKNKTRITGAGVTQQ 909
            +FPWEKP+V             +T LAELTLP SEL+RL  L    K+KTRI  +GVTQ 
Sbjct: 181  RFPWEKPVVEELEERKSMRSRSKTSLAELTLPESELKRLLKLTFEKKHKTRIGRSGVTQA 240

Query: 910  VVETIREKWNTSEVVRLKVEGAPALNMKRMHEILERKTGGLVIWRSGTSVALYRGVGYEI 1089
            VV+ I E+W TSE+VRLK EG  ALNMKRMHEILERKTGGLVIWRSG SV+LYRGV YE+
Sbjct: 241  VVDKIHERWKTSEIVRLKFEGEAALNMKRMHEILERKTGGLVIWRSGNSVSLYRGVSYEV 300

Query: 1090 PSDRMKKRIMRRDEIRHKNVPIVDEESNQNPSEVSPYNAVDSLRTDSANTSEENHNSVRQ 1269
            PS +  K+I R+ E   K +P     S  NPS+++  +   +      +T++E       
Sbjct: 301  PSVQQNKKIYRKSENSSKLLPTPSYNSVGNPSDIASNSGTSAPLAKLESTNDEKERDY-L 359

Query: 1270 TEVNYEDEVEKLLDGLGPRYTDWPGPGPLPVDADLLPGIVPGYQPPFRILPYGVRSXXXX 1449
             +VNYE EV+KLLDGLGPRYTDWPG  PLPVDAD+LP  VPGYQPPFR+LP+GVR+    
Sbjct: 360  PKVNYEHEVDKLLDGLGPRYTDWPGCDPLPVDADMLPVTVPGYQPPFRVLPFGVRATLGL 419

Query: 1450 XXXXXXXXXXXVLPPHFALGRSRQHQGLASAMIKLWQRSSIAKIAIKRGVQLTTSERMAE 1629
                        LPPHFALGR+RQ QGLA AMIKLW+ SSIAK+A+KRGVQLTTSERMAE
Sbjct: 420  REATALRRIARTLPPHFALGRNRQLQGLAVAMIKLWEISSIAKVALKRGVQLTTSERMAE 479

Query: 1630 DIKKVTGGMLLSRNKDFLVFYRGKDFLSPXXXXXXXXXXXXXXXXQDEEEKARLRASDLL 1809
            +IKK+TGG+LLSRNKDFLVF+RGK+FLS                 QDEEE+ARLRAS LL
Sbjct: 480  EIKKLTGGILLSRNKDFLVFFRGKNFLSADVTQALLERERMAKVMQDEEEQARLRASSLL 539

Query: 1810 TAGVATINSSRTAGTLGETLDADARWGKRLDDKDKENVMREAEIVRHGNLVRKLEKKLAF 1989
                 T   S  AGTLGETLDADA+WGK LD++ K+ +MRE E +RH NLV+KLE+KL+F
Sbjct: 540  IPTNNTSELSAEAGTLGETLDADAKWGKTLDERHKQKIMREVEQLRHANLVKKLEQKLSF 599

Query: 1990 AERKLMKAERVLSKVEETLNPLDRRAEPDSLTDEER 2097
            AERKL +AE+ L KVE  L P + +A+P+S+TDEER
Sbjct: 600  AERKLRRAEKALMKVESFLKPSEYKADPESITDEER 635


>gb|EPS65975.1| hypothetical protein M569_08800, partial [Genlisea aurea]
          Length = 761

 Score =  592 bits (1525), Expect = e-166
 Identities = 343/663 (51%), Positives = 417/663 (62%), Gaps = 7/663 (1%)
 Frame = +1

Query: 130  MALVPSHQLYPRTARLSFLRHTSSTPFKKPNLHTPHDVVNQDCVFKKNPPKRSNFVVKNS 309
            MA+VP +Q YP+TA       +S + F+   L      +   C   +    R  F     
Sbjct: 1    MAVVPGYQFYPKTASFVHSLQSSVSDFQLRRLQ-----LISFCSSARPSASRGRFNPSRG 55

Query: 310  SKRWNLSTISPNXXXXXXXXXXXVFGSSWLGKWNETHN--EINPKKPQIVLNYRXXXXXX 483
             KR     ++                SSW+  WN       +N +KPQ V++YR      
Sbjct: 56   RKRDGGRNLASGTLVADGRGA----SSSWMDFWNAVPGTQHVN-RKPQAVVDYRNADDVS 110

Query: 484  XXXXXXXXXXXXX-MDRIVEKLKKFGYADE--TTEKDKMVKRDAEKGSIEDIFFVEEGIL 654
                          M RIV KLKKFGY D+    ++++  ++  EKGS+EDIF VEEG+L
Sbjct: 111  DAEEGTSTSTGVSTMQRIVAKLKKFGYLDDDAAADENEAGRQIVEKGSVEDIFSVEEGLL 170

Query: 655  PNVRGGFSKESPFGDENVIAKDGV-VKFPWEKPLVXXXXXXXXXXXXXRTHLAELTLPAS 831
            PN RGG S E PFGDE V  K  V V+FPWEK                R+ LAE TLP S
Sbjct: 171  PNSRGGISHEFPFGDEIVAVKGDVRVRFPWEKKNDPNVQKSSLDSRKARS-LAESTLPES 229

Query: 832  ELRRLTNLALRIKNKTRITGAGVTQQVVETIREKWNTSEVVRLKVEGAPALNMKRMHEIL 1011
            E+ RL NLALR KNKTRI GAGVTQ++VE I EKW T+EVVRLK+EG  ALNMKRMHEIL
Sbjct: 230  EVTRLRNLALRTKNKTRIKGAGVTQEIVEAIHEKWKTAEVVRLKIEGPSALNMKRMHEIL 289

Query: 1012 ERKTGGLVIWRSGTSVALYRGVGYEIPSDRMKKRIMRRDEIRHKNVPIVDEESNQNPSEV 1191
            ERKTGGLV+WRSG+SVALYRGV +E  S ++ KRI   +    ++   + E   Q  SE+
Sbjct: 290  ERKTGGLVVWRSGSSVALYRGVKFEDTSRKLNKRITGNNGAPRESYRSL-ERITQGSSEL 348

Query: 1192 SPYNAVDSLRTDSANTSEENHNSVRQTE-VNYEDEVEKLLDGLGPRYTDWPGPGPLPVDA 1368
            S  +    +  D++   + +   ++ T  V YEDEVEKLL+ LGPRY DWPG GPLPVDA
Sbjct: 349  SD-DGGKPMEDDASFNGDPDRKIIQTTSYVKYEDEVEKLLESLGPRYEDWPGDGPLPVDA 407

Query: 1369 DLLPGIVPGYQPPFRILPYGVRSXXXXXXXXXXXXXXXVLPPHFALGRSRQHQGLASAMI 1548
            DLLPG +PGYQPPFR+LPYGVRS                LPPHFALGRSR HQGLA+AMI
Sbjct: 408  DLLPGAIPGYQPPFRLLPYGVRSTLGIKEATTLRRIARGLPPHFALGRSRNHQGLAAAMI 467

Query: 1549 KLWQRSSIAKIAIKRGVQLTTSERMAEDIKKVTGGMLLSRNKDFLVFYRGKDFLSPXXXX 1728
            K+W+RSSIAKIA+KRGVQLTTSE +AED+K++TGGMLLSRNK++LVFYRGKDFLSP    
Sbjct: 468  KVWERSSIAKIALKRGVQLTTSEWIAEDLKRLTGGMLLSRNKEYLVFYRGKDFLSPDVAE 527

Query: 1729 XXXXXXXXXXXXQDEEEKARLRASDLLTAGVATINSSRTAGTLGETLDADARWGKRLDDK 1908
                        QDEEE+ARLRAS  +     T +    AGTL ETLDAD RWGKRLDD 
Sbjct: 528  ALLEKERLAKTLQDEEERARLRASAFV---APTADGPADAGTLKETLDADTRWGKRLDDV 584

Query: 1909 DKENVMREAEIVRHGNLVRKLEKKLAFAERKLMKAERVLSKVEETLNPLDRRAEPDSLTD 2088
             KE VMREAEI+RH N+VRKLE KL  AERKL KAER L KVE++LNP +   +P+++TD
Sbjct: 585  HKEKVMREAEILRHANIVRKLESKLDLAERKLAKAERALFKVEKSLNPAEPEKDPEAITD 644

Query: 2089 EER 2097
            EER
Sbjct: 645  EER 647


>ref|XP_003590782.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
            truncatula] gi|355479830|gb|AES61033.1| Chloroplastic
            group IIA intron splicing facilitator CRS1 [Medicago
            truncatula]
          Length = 838

 Score =  588 bits (1516), Expect = e-165
 Identities = 337/664 (50%), Positives = 423/664 (63%), Gaps = 8/664 (1%)
 Frame = +1

Query: 130  MALVPSHQLYPRTARLSFLRHTSSTPFKKPNLHTPHDVVNQDCVFKKNPPKRSNFVVKNS 309
            MAL+P+ QL+P         HTS      PN H  H +     +   +  K  +F+ K  
Sbjct: 1    MALLPTRQLHPF--------HTS------PNFH--HSIRFFTTISSSSIQK--SFIFKTP 42

Query: 310  SKRWN-LSTISPNXXXXXXXXXXXVFGSSWLGKWNETHNEINPKKPQIVLNYRXXXXXXX 486
            +K +  LS+ +P                +WL +WNE +    PK P+ VLNY+       
Sbjct: 43   TKNFTYLSSKNPIFHLKSFCT------DTWLKRWNEQNR---PKPPRGVLNYQGSGNGHS 93

Query: 487  XXXXXXXXXXXX-----MDRIVEKLKKFGYADETTEKDKMVKRDAEKGSIEDIFFVEEGI 651
                             MDRIVEKLKKFGY  +  E  K  +   EKGS+EDIF+VEEG+
Sbjct: 94   SKSDFDSSDDEDFGGSRMDRIVEKLKKFGYESDENENIKE-EGVIEKGSMEDIFYVEEGM 152

Query: 652  LPNVRGGFSKESPFGDENVIAKDG-VVKFPWEKPLVXXXXXXXXXXXXX-RTHLAELTLP 825
            LPN RGGFS ESPFG  +  + DG  V+FPWEKP+V              +T +AELTLP
Sbjct: 153  LPNTRGGFSPESPFGIGSYGSGDGGEVRFPWEKPVVDEEVEERTSSRKKSKTSMAELTLP 212

Query: 826  ASELRRLTNLALRIKNKTRITGAGVTQQVVETIREKWNTSEVVRLKVEGAPALNMKRMHE 1005
             SELRRL  L    K+KTRI G GVTQ  V+ I E+W TSE+VRLK EG  ALNMKRMHE
Sbjct: 213  ESELRRLLKLTFMKKHKTRIGGGGVTQAAVDKIHERWKTSEIVRLKFEGDAALNMKRMHE 272

Query: 1006 ILERKTGGLVIWRSGTSVALYRGVGYEIPSDRMKKRIMRRDEIRHKNVPIVDEESNQNPS 1185
            ILE+KTGGLVIWRSG SV+LYRGV Y+ PS +  K++ R++E   K +    ++    PS
Sbjct: 273  ILEKKTGGLVIWRSGNSVSLYRGVSYKDPSIQQNKQLYRKNEKSLKFLSAPSDDFEVEPS 332

Query: 1186 EVSPYNAVDSLRTDSANTSEENHNSVRQTEVNYEDEVEKLLDGLGPRYTDWPGPGPLPVD 1365
            E +  ++      +   ++ +    V   +++YEDEV+KLLDGLGPRYTDWPG  PLPVD
Sbjct: 333  EFTT-DSETKTSLEKLESTNDQKEKVNLPKISYEDEVDKLLDGLGPRYTDWPGCEPLPVD 391

Query: 1366 ADLLPGIVPGYQPPFRILPYGVRSXXXXXXXXXXXXXXXVLPPHFALGRSRQHQGLASAM 1545
            AD+LP  VPGYQPPFR+LP+GVR                 LPPHFALGR+RQ QGLA+AM
Sbjct: 392  ADMLPPTVPGYQPPFRVLPFGVRPTLGFKEATSLRRIARGLPPHFALGRNRQLQGLAAAM 451

Query: 1546 IKLWQRSSIAKIAIKRGVQLTTSERMAEDIKKVTGGMLLSRNKDFLVFYRGKDFLSPXXX 1725
            IKLW++SSIAK+A+KRGVQLTTSERMAE+IKK+TGG++LSRNKDFLVFYRGK+FLSP   
Sbjct: 452  IKLWEKSSIAKVALKRGVQLTTSERMAEEIKKLTGGIILSRNKDFLVFYRGKNFLSPDVT 511

Query: 1726 XXXXXXXXXXXXXQDEEEKARLRASDLLTAGVATINSSRTAGTLGETLDADARWGKRLDD 1905
                         QDEEE+ARLRAS L+   + T   S  AGTLGETLDADA+WGK LD+
Sbjct: 512  QALLEREKMAKSMQDEEEQARLRASSLILPAINTSELSAEAGTLGETLDADAKWGKTLDE 571

Query: 1906 KDKENVMREAEIVRHGNLVRKLEKKLAFAERKLMKAERVLSKVEETLNPLDRRAEPDSLT 2085
              ++ VMRE E +RH N+VRKLE+KL+ AERK+ +AER L KVE +L P + RA+P+S+T
Sbjct: 572  CHEQKVMREVEQLRHANIVRKLEEKLSLAERKIRRAERALMKVEVSLKPSETRADPESIT 631

Query: 2086 DEER 2097
            DEER
Sbjct: 632  DEER 635