BLASTX nr result
ID: Atropa21_contig00002151
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00002151
(1065 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006363306.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 355 1e-95
ref|XP_004237950.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 350 5e-94
gb|EPS70093.1| hypothetical protein M569_04668, partial [Genlise... 192 2e-46
ref|XP_002285735.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 189 2e-45
emb|CAN61580.1| hypothetical protein VITISV_008033 [Vitis vinifera] 188 4e-45
gb|EOY15917.1| RNA-binding family protein, putative [Theobroma c... 187 5e-45
ref|XP_006433910.1| hypothetical protein CICLE_v10001605mg [Citr... 181 4e-43
ref|XP_002513981.1| ribonucleoprotein, chloroplast, putative [Ri... 180 7e-43
ref|XP_006472543.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 180 1e-42
ref|XP_002306558.1| RNA recognition motif-containing family prot... 177 6e-42
gb|EXB86655.1| 28 kDa ribonucleoprotein [Morus notabilis] 176 1e-41
ref|XP_004136268.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 176 1e-41
gb|AFK43359.1| unknown [Lotus japonicus] 171 5e-40
ref|NP_192643.2| RNA recognition motif-containing protein [Arabi... 170 8e-40
ref|XP_003526568.2| PREDICTED: 30 kDa ribonucleoprotein, chlorop... 170 1e-39
dbj|BAD43393.1| putative protein [Arabidopsis thaliana] 170 1e-39
gb|ACU23303.1| unknown [Glycine max] 170 1e-39
gb|EMJ24372.1| hypothetical protein PRUPE_ppa009133mg [Prunus pe... 169 2e-39
gb|ESW08278.1| hypothetical protein PHAVU_009G033600g [Phaseolus... 168 3e-39
ref|XP_006288345.1| hypothetical protein CARUB_v10001593mg [Caps... 168 4e-39
>ref|XP_006363306.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic-like [Solanum
tuberosum]
Length = 284
Score = 355 bits (912), Expect = 1e-95
Identities = 196/283 (69%), Positives = 208/283 (73%), Gaps = 27/283 (9%)
Frame = +2
Query: 2 RLLCSPSVFXXXXXXXXXXXXXHHHSTIPILLSPSTISLHSPYFSP------QRPYLYIS 163
RLLCSPS+F HHH T PILLSPS+ISL +P FSP QRPYLYIS
Sbjct: 5 RLLCSPSLFPSSSSTLFPL---HHHPTTPILLSPSSISLRTPCFSPLIPIKAQRPYLYIS 61
Query: 164 HCSS-----ETQQDIEEQSEDDSSKTRVLAQNAPWTYTADDLRPLFEKYGTVHDIEVAMY 328
+CSS ET QD+EEQ ED+S K RVLAQNAPWTYTA+DLRPLFEKYGTV DIEVAMY
Sbjct: 62 NCSSSAQTPETAQDLEEQLEDESLKRRVLAQNAPWTYTANDLRPLFEKYGTVEDIEVAMY 121
Query: 329 NKTRSRGLVFVTMGSHEEAKSVLENLEAYELEGRPLRLAWAXXXXXXXXXXXXXXXXXVH 508
NKTRSRGLVFVTMGSHEEAK+VLENLEAYELEGRPLRL WA +H
Sbjct: 122 NKTRSRGLVFVTMGSHEEAKAVLENLEAYELEGRPLRLTWAKPKIEKPSSPPPSKPLPIH 181
Query: 509 NLFIANLHFEARSRDLMDFFKDNGVNVVSAEV----------------XNTKEEADAALS 640
NLF+ANLHFEARS DL++FFK NG NVVSAEV NTKEEADAALS
Sbjct: 182 NLFVANLHFEARSNDLLEFFKANGANVVSAEVIFNDNPRRSAGYGFVSLNTKEEADAALS 241
Query: 641 SFDGKEFMGRPIRVAHSKRFLREETKKTIQSQEQPSELISVAE 769
SFDGKEFMGR IRVA SKRFLREETKK IQSQE PSELISVAE
Sbjct: 242 SFDGKEFMGRAIRVAQSKRFLREETKKAIQSQELPSELISVAE 284
>ref|XP_004237950.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic-like [Solanum
lycopersicum]
Length = 278
Score = 350 bits (898), Expect = 5e-94
Identities = 192/278 (69%), Positives = 206/278 (74%), Gaps = 22/278 (7%)
Frame = +2
Query: 2 RLLCSPSVFXXXXXXXXXXXXXHHHSTIPILLSPSTISLHSPYFSP------QRPYLYIS 163
RLLCSPS+F HHHST P+LLSPS+IS +P FSP QRPYLYIS
Sbjct: 5 RLLCSPSLFPSSSSTLFPL---HHHSTTPVLLSPSSISWRTPCFSPLIPIKPQRPYLYIS 61
Query: 164 HCSSETQQDIEEQSEDDSSKTRVLAQNAPWTYTADDLRPLFEKYGTVHDIEVAMYNKTRS 343
+CSS Q D+EEQ ED S K RVLAQNAPWTY+A+DLRPLFEKYGTV DIEVAMYNKTRS
Sbjct: 62 NCSSSAQ-DLEEQLEDGSLKRRVLAQNAPWTYSANDLRPLFEKYGTVEDIEVAMYNKTRS 120
Query: 344 RGLVFVTMGSHEEAKSVLENLEAYELEGRPLRLAWAXXXXXXXXXXXXXXXXXVHNLFIA 523
RGLVFVTMGSHEEAK+VLENLEAYELEGRPLRLAWA +HNLF+A
Sbjct: 121 RGLVFVTMGSHEEAKAVLENLEAYELEGRPLRLAWAKPKTEKPSSPPPSKPLPIHNLFVA 180
Query: 524 NLHFEARSRDLMDFFKDNGVNVVSAEV----------------XNTKEEADAALSSFDGK 655
NLHFEARS DL++FFK NG NVVSAEV NTKEEADAALSSFDGK
Sbjct: 181 NLHFEARSNDLLEFFKANGANVVSAEVIFNDNPRRSAGYGFVSLNTKEEADAALSSFDGK 240
Query: 656 EFMGRPIRVAHSKRFLREETKKTIQSQEQPSELISVAE 769
EFMGR IRVA SKRFLREETKK I+SQE PSELISVAE
Sbjct: 241 EFMGRAIRVAQSKRFLREETKKVIKSQELPSELISVAE 278
>gb|EPS70093.1| hypothetical protein M569_04668, partial [Genlisea aurea]
Length = 263
Score = 192 bits (487), Expect = 2e-46
Identities = 109/192 (56%), Positives = 125/192 (65%), Gaps = 17/192 (8%)
Frame = +2
Query: 206 EDDSSKTRVLAQNAPWTYTADDLRPLFEKYGTVHDIEVAMYNKTRSRGLVFVTMGSHEEA 385
ED+ S+TR+L QN PWT TADD++PLFE YG+V +IE +MYNKTR+RGL FVTM SHEEA
Sbjct: 74 EDEISRTRLLVQNVPWTCTADDIQPLFENYGSVIEIEFSMYNKTRNRGLAFVTMASHEEA 133
Query: 386 KSVLENLEAYELEGRPLRLAWA-XXXXXXXXXXXXXXXXXVHNLFIANLHFEARSRDLMD 562
+ L +LE+ E EGR L+L WA VHNLF+ANL FEAR +DL D
Sbjct: 134 LAALNSLESTEFEGRVLKLNWAKPKKEKNKTGVVITQPLPVHNLFVANLPFEARPKDLKD 193
Query: 563 FFKDNGVNVVSAEV----------------XNTKEEADAALSSFDGKEFMGRPIRVAHSK 694
FF N VSAEV TKEEADAAL+SF KEFMGRPIRVA SK
Sbjct: 194 FF-----NAVSAEVIYNENPRRPAGYGFVSFYTKEEADAALTSFQAKEFMGRPIRVARSK 248
Query: 695 RFLREETKKTIQ 730
RFLRE TK IQ
Sbjct: 249 RFLREGTKAAIQ 260
>ref|XP_002285735.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
gi|302142004|emb|CBI19207.3| unnamed protein product
[Vitis vinifera]
Length = 294
Score = 189 bits (479), Expect = 2e-45
Identities = 109/261 (41%), Positives = 154/261 (59%), Gaps = 29/261 (11%)
Frame = +2
Query: 74 HSTIPILLSPSTISLHSPYFSPQRPYLYISHCSSETQQDI-------------EEQSEDD 214
HS + S S +S P + +R L+ S++TQ + E++
Sbjct: 26 HSILSFSSSFSPLSHALPLRTTRRINLFHVSASAQTQSPPPASPSTAVTVDTPQNDEEEE 85
Query: 215 SSKTRVLAQNAPWTYTADDLRPLFEKYGTVHDIEVAMYNKTRSRGLVFVTMGSHEEAKSV 394
S+TR++AQN PWT TA D+R LFEKYGTV D+E++M+NKTR+RGL F++MGS EEA +
Sbjct: 86 FSRTRLIAQNIPWTCTAQDIRSLFEKYGTVLDVELSMHNKTRNRGLAFISMGSPEEALAA 145
Query: 395 LENLEAYELEGRPLRLAWAXXXXXXXXXXXXXXXXXVHNLFIANLHFEARSRDLMDFFKD 574
L NLE+YELEGR +++ +A +NLFIANL ++AR++DL +FF
Sbjct: 146 LSNLESYELEGRAIKVNYANPQKKKPSSPIQHKPVTPYNLFIANLPYQARAKDLREFFSS 205
Query: 575 NGVNVVSAEV----------------XNTKEEADAALSSFDGKEFMGRPIRVAHSKRFLR 706
NVVSAEV +KEEAD ALSSF G+ FMGRP+RVA S+RF++
Sbjct: 206 GNCNVVSAEVIFHENPRRSSGYGFVSFGSKEEADTALSSFQGQMFMGRPLRVARSRRFVK 265
Query: 707 EETKKTIQSQEQPSELISVAE 769
E K + Q+++ + L S +E
Sbjct: 266 RENKMSDQTEDVANPLNSNSE 286
>emb|CAN61580.1| hypothetical protein VITISV_008033 [Vitis vinifera]
Length = 294
Score = 188 bits (477), Expect = 4e-45
Identities = 109/261 (41%), Positives = 153/261 (58%), Gaps = 29/261 (11%)
Frame = +2
Query: 74 HSTIPILLSPSTISLHSPYFSPQRPYLYISHCSSETQQDI-------------EEQSEDD 214
HS + S S +S P +R L+ S++TQ + E++
Sbjct: 26 HSILSFSSSFSPLSHALPLRXTRRINLFHVSASAQTQSPPPASPSTAVTVDTPQNDEEEE 85
Query: 215 SSKTRVLAQNAPWTYTADDLRPLFEKYGTVHDIEVAMYNKTRSRGLVFVTMGSHEEAKSV 394
S+TR++AQN PWT TA D+R LFEKYGTV D+E++M+NKTR+RGL F++MGS EEA +
Sbjct: 86 FSRTRLIAQNIPWTCTAQDIRSLFEKYGTVLDVELSMHNKTRNRGLAFISMGSPEEALAA 145
Query: 395 LENLEAYELEGRPLRLAWAXXXXXXXXXXXXXXXXXVHNLFIANLHFEARSRDLMDFFKD 574
L NLE+YELEGR +++ +A +NLFIANL ++AR++DL +FF
Sbjct: 146 LSNLESYELEGRAIKVNYANPQKKKPSSPIQHKPVTPYNLFIANLPYQARAKDLREFFSS 205
Query: 575 NGVNVVSAEV----------------XNTKEEADAALSSFDGKEFMGRPIRVAHSKRFLR 706
NVVSAEV +KEEAD ALSSF G+ FMGRP+RVA S+RF++
Sbjct: 206 GNCNVVSAEVIFHENPRRSSGYGFVSFGSKEEADTALSSFQGQMFMGRPLRVARSRRFVK 265
Query: 707 EETKKTIQSQEQPSELISVAE 769
E K + Q+++ + L S +E
Sbjct: 266 RENKMSDQTEDVANPLNSNSE 286
>gb|EOY15917.1| RNA-binding family protein, putative [Theobroma cacao]
Length = 290
Score = 187 bits (476), Expect = 5e-45
Identities = 102/221 (46%), Positives = 139/221 (62%), Gaps = 21/221 (9%)
Frame = +2
Query: 155 YISHCSSETQQDI-----EEQSEDDSSKTRVLAQNAPWTYTADDLRPLFEKYGTVHDIEV 319
+I H S+ TQ +EQ E++ SKTR++AQN PWT T +D+R LFEKYGTV D+E+
Sbjct: 58 FILHFSATTQVPALKVNEQEQHEEEFSKTRLIAQNVPWTCTTEDIRSLFEKYGTVVDVEL 117
Query: 320 AMYNKTRSRGLVFVTMGSHEEAKSVLENLEAYELEGRPLRLAWAXXXXXXXXXXXXXXXX 499
+M+NK R+RGL FV+M S EEA + L NLE+YE EGR LRL +A
Sbjct: 118 SMHNKARNRGLAFVSMASPEEALAALNNLESYEFEGRTLRLNYAKPKKKRPAPPEKPKPV 177
Query: 500 XVHNLFIANLHFEARSRDLMDFFKDNGVNVVSAEV----------------XNTKEEADA 631
NLF+ANL +EAR++ L +FF G NVVSAEV +K+EADA
Sbjct: 178 PAFNLFVANLSYEARAKHLKEFFSSEGANVVSAEVIFHENPRKSSGYGFVSFKSKKEADA 237
Query: 632 ALSSFDGKEFMGRPIRVAHSKRFLREETKKTIQSQEQPSEL 754
A+S+F GK FMGRPIRVA S++F++ ++ + Q ++ +EL
Sbjct: 238 AMSAFQGKMFMGRPIRVARSRQFVKVQSDDSSQPDDKSNEL 278
>ref|XP_006433910.1| hypothetical protein CICLE_v10001605mg [Citrus clementina]
gi|557536032|gb|ESR47150.1| hypothetical protein
CICLE_v10001605mg [Citrus clementina]
Length = 363
Score = 181 bits (459), Expect = 4e-43
Identities = 108/262 (41%), Positives = 154/262 (58%), Gaps = 28/262 (10%)
Frame = +2
Query: 68 HHHSTIPILLSPSTISLHSPYF--SPQRPYLYISHCSSETQQDI----------EEQSED 211
H++ P+ SP H+ F +P++ ++ H S+ TQ EQ E+
Sbjct: 98 HYNYFFPLSSSP----FHAYTFPITPKKVSPFVFHFSATTQDPFVDSSSAAAVNTEQREE 153
Query: 212 DSSKTRVLAQNAPWTYTADDLRPLFEKYGTVHDIEVAMYNKTRSRGLVFVTMGSHEEAKS 391
+ SKTR++AQN PWT T +D+R LFE++GTV D+E++M++K R+RGL FVTMGS +EA +
Sbjct: 154 EYSKTRLVAQNVPWTSTHEDIRALFEQHGTVLDVELSMHSKNRNRGLAFVTMGSPDEATA 213
Query: 392 VLENLEAYELEGRPLRLAWAXXXXXXXXXXXXXXXXXVHNLFIANLHFEARSRDLMDFFK 571
L NLE+YE EGR L++ +A NLFIANL FEAR++DL +FF
Sbjct: 214 ALNNLESYEFEGRTLKVNYAKIKKKNPFPPVQPKPFATFNLFIANLSFEARAKDLREFFI 273
Query: 572 DNGVNVVSAEV----------------XNTKEEADAALSSFDGKEFMGRPIRVAHSKRFL 703
G +VVSAEV +K+ A+AA+S+F GK FMGRP+RVA S++F
Sbjct: 274 SEGWDVVSAEVIFHDNPRRSAGYGFVSFKSKKVAEAAISAFQGKLFMGRPLRVAPSRQFA 333
Query: 704 REETKKTIQSQEQPSELISVAE 769
R +TK+ + S E +L AE
Sbjct: 334 RLQTKEGLHSDETSDDLNINAE 355
>ref|XP_002513981.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223547067|gb|EEF48564.1| ribonucleoprotein,
chloroplast, putative [Ricinus communis]
Length = 305
Score = 180 bits (457), Expect = 7e-43
Identities = 99/235 (42%), Positives = 142/235 (60%), Gaps = 18/235 (7%)
Frame = +2
Query: 104 STISLHSPYFSPQRPYLYISHCSSETQQDIEEQSEDDSSKTRVLAQNAPWTYTADDLRPL 283
S + P PQ S S+T+++ +EQ +++ S TRVLA N PW T +D+R L
Sbjct: 65 SASATQDPILEPQ------SLLESKTEKE-QEQEQEEFSTTRVLASNVPWNCTTEDIRAL 117
Query: 284 FEKYGTVHDIEVAMYNKTRSRGLVFVTMGSHEEAKSVLENLEAYELEGRPLRLAWAXXXX 463
FEK+GTV D+E++MYNKTR+RGL FV+MGS EEA + +++L++YE EGR L++ +A
Sbjct: 118 FEKFGTVVDVELSMYNKTRNRGLAFVSMGSPEEAATAIKSLDSYEFEGRSLKMNYAKLKK 177
Query: 464 XXXXXXXXXXXXXVHNLFIANLHFEARSRDLMDFFKDNGVNVVSAEV------------- 604
NLF+ANL F+A+ DL +FFK G ++ SAE+
Sbjct: 178 EKPLPPLPPKPVPTFNLFVANLPFDAKDNDLKEFFKSEGADIASAEIVYHNHDKPRKPSG 237
Query: 605 -----XNTKEEADAALSSFDGKEFMGRPIRVAHSKRFLREETKKTIQSQEQPSEL 754
TK+EADAALS+F K FMGRPIRVA SK+F+R+ ++ QS + ++L
Sbjct: 238 YGFVAFKTKKEADAALSTFADKVFMGRPIRVARSKQFVRQPREEGQQSDDTSTDL 292
>ref|XP_006472543.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Citrus
sinensis]
Length = 306
Score = 180 bits (456), Expect = 1e-42
Identities = 108/262 (41%), Positives = 153/262 (58%), Gaps = 28/262 (10%)
Frame = +2
Query: 68 HHHSTIPILLSPSTISLHSPYF--SPQRPYLYISHCSSETQQDI----------EEQSED 211
H++ P+ SP H+ F +P++ ++ H S+ TQ EQ E+
Sbjct: 41 HYNYFFPLSSSP----FHAYTFPITPKKVSPFVFHFSATTQDPFVDSSSAAAANTEQREE 96
Query: 212 DSSKTRVLAQNAPWTYTADDLRPLFEKYGTVHDIEVAMYNKTRSRGLVFVTMGSHEEAKS 391
+ SKTR++AQN PWT T +D+R LFE++GTV DIE++M++K R+RGL FVTMGS +EA +
Sbjct: 97 EYSKTRLVAQNVPWTSTHEDIRALFEQHGTVLDIELSMHSKNRNRGLAFVTMGSPDEATA 156
Query: 392 VLENLEAYELEGRPLRLAWAXXXXXXXXXXXXXXXXXVHNLFIANLHFEARSRDLMDFFK 571
L NLE+YE EGR L++ +A NLFIANL FEAR++DL +FF
Sbjct: 157 ALNNLESYEFEGRTLKVNYAKVKKKNPAPPVQPKPFPTFNLFIANLSFEARAKDLREFFI 216
Query: 572 DNGVNVVSAEV----------------XNTKEEADAALSSFDGKEFMGRPIRVAHSKRFL 703
G +VVSAEV +K+ A+ A+S+F GK FMGRP+RVA S++F
Sbjct: 217 SEGWDVVSAEVIFHDNPRRSAGYGFVSFKSKKVAETAISAFQGKLFMGRPLRVAPSRQFA 276
Query: 704 REETKKTIQSQEQPSELISVAE 769
R +TK+ + S E +L AE
Sbjct: 277 RLQTKEGLHSDETSDDLNINAE 298
>ref|XP_002306558.1| RNA recognition motif-containing family protein [Populus
trichocarpa] gi|222856007|gb|EEE93554.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 309
Score = 177 bits (449), Expect = 6e-42
Identities = 95/208 (45%), Positives = 128/208 (61%), Gaps = 16/208 (7%)
Frame = +2
Query: 185 QDIEEQSEDDSSKTRVLAQNAPWTYTADDLRPLFEKYGTVHDIEVAMYNKTRSRGLVFVT 364
Q E+ E++ SKTR+ A N PW TA+D+R LF+K+GTV D+E++MY+K R+RGL FVT
Sbjct: 91 QSKAEEKEEEFSKTRLFASNVPWNCTAEDIRALFQKFGTVVDVELSMYSKIRNRGLAFVT 150
Query: 365 MGSHEEAKSVLENLEAYELEGRPLRLAWAXXXXXXXXXXXXXXXXXVHNLFIANLHFEAR 544
MGS EEA + L NLE+YE EGR L++ +A NLF+ANL FEA+
Sbjct: 151 MGSPEEAVAALNNLESYEFEGRTLKMNYAKAKKKKPSPPPPPKPGPTFNLFVANLPFEAK 210
Query: 545 SRDLMDFFKDNGVNVVSAEV----------------XNTKEEADAALSSFDGKEFMGRPI 676
S+DL +FF G NVVSAE+ TK+EAD A+S+F KEFMGR +
Sbjct: 211 SKDLKEFFIAEGANVVSAEIIFHDNPRRPSGYGFVAFKTKKEADYAISTFSDKEFMGRQL 270
Query: 677 RVAHSKRFLREETKKTIQSQEQPSELIS 760
RVA S++F+++ + QS EL S
Sbjct: 271 RVARSRQFVKQRKEDAAQSDGTSGELES 298
>gb|EXB86655.1| 28 kDa ribonucleoprotein [Morus notabilis]
Length = 605
Score = 176 bits (447), Expect = 1e-41
Identities = 97/226 (42%), Positives = 136/226 (60%), Gaps = 27/226 (11%)
Frame = +2
Query: 158 ISHCSSETQQDIEEQSEDDSS-----------KTRVLAQNAPWTYTADDLRPLFEKYGTV 304
+SH SS Q+ E S K R+ AQN PW T +D+R LFEKYGTV
Sbjct: 373 VSHFSSTAQEQALESPPASESGETGSETEEVLKNRLYAQNVPWNCTPEDIRALFEKYGTV 432
Query: 305 HDIEVAMYNKTRSRGLVFVTMGSHEEAKSVLENLEAYELEGRPLRLAWAXXXXXXXXXXX 484
D+E++M+NKTR+RGL FVTMGS EEA + L NL++YEL+GR +++ +A
Sbjct: 433 EDVELSMFNKTRNRGLAFVTMGSPEEALAALNNLQSYELDGRVIKIDYARLRKKKVTTPM 492
Query: 485 XXXXXXVHNLFIANLHFEARSRDLMDFFKDNGVNVVSAEV----------------XNTK 616
NLF+ANL FEAR++DL +FF G +VVSAEV +K
Sbjct: 493 QPKPEVTFNLFVANLSFEARAKDLREFFNSEGHSVVSAEVIFHENPRRSLGYGFVAFKSK 552
Query: 617 EEADAALSSFDGKEFMGRPIRVAHSKRFLREETKKTIQSQEQPSEL 754
+EA+AALS+ GK FMGRPIRVA S++F+++ T ++ ++++ +EL
Sbjct: 553 KEAEAALSAVQGKIFMGRPIRVARSRQFVKQPTGESAKTEDTSTEL 598
>ref|XP_004136268.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus] gi|449497014|ref|XP_004160289.1| PREDICTED: 31
kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 300
Score = 176 bits (446), Expect = 1e-41
Identities = 104/246 (42%), Positives = 147/246 (59%), Gaps = 23/246 (9%)
Frame = +2
Query: 98 SPSTISL---HSPYFS--PQRPYLYISHCSSETQQDIEEQSED--DSSKTRVLAQNAPWT 256
SPS +S HSP S +R ++ +S +Q + D + S+TR+LAQN PW
Sbjct: 50 SPSLLSTSISHSPLISIRAKRTSTFVFQFASTSQDEAVSSPSDTEEFSQTRLLAQNVPWD 109
Query: 257 YTADDLRPLFEKYGTVHDIEVAMYNKTRSRGLVFVTMGSHEEAKSVLENLEAYELEGRPL 436
T +D+R LFEKYGTV D+E++MYNK R+RGL FVTMGS EEA + L NLE+YE EGR L
Sbjct: 110 STPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAALNNLESYEFEGRTL 169
Query: 437 RLAWAXXXXXXXXXXXXXXXXXVHNLFIANLHFEARSRDLMDFFKDNGVNVVSAEV---- 604
RL +A NLF+ANL F+AR++DL +FF NVVSA++
Sbjct: 170 RLNYA-KLKKEKPSPPVKPKPVTFNLFVANLPFDARAKDLKEFFDSGSGNVVSAQIIFNE 228
Query: 605 ------------XNTKEEADAALSSFDGKEFMGRPIRVAHSKRFLREETKKTIQSQEQPS 748
TK++A+AA+S F GK FMGR +RVA SK+F++ +++ QS++ +
Sbjct: 229 NPRRSSGYGFVAFKTKKDAEAAISEFQGKTFMGRSLRVARSKQFVKLPSEEKPQSEDAST 288
Query: 749 ELISVA 766
+ + +A
Sbjct: 289 DGVELA 294
>gb|AFK43359.1| unknown [Lotus japonicus]
Length = 305
Score = 171 bits (433), Expect = 5e-40
Identities = 106/255 (41%), Positives = 141/255 (55%), Gaps = 26/255 (10%)
Frame = +2
Query: 68 HHHSTIPILLSPSTISLHSPYFSPQRPYLYISHC----------SSETQQDIEEQSEDDS 217
H+HST H P FS + P L I+H S+ QQ EE + ++
Sbjct: 48 HNHST-------KLTFCHIP-FSFRLPCLSITHSTRANTLTFASSTTQQQQTEEATTEEF 99
Query: 218 SKTRVLAQNAPWTYTADDLRPLFEKYGTVHDIEVAMYNKTRSRGLVFVTMGSHEEAKSVL 397
S TR++AQN PWT T +D+R LFE+YGTV ++E++MYNKTRSRGL FV M S EEA L
Sbjct: 100 STTRLVAQNVPWTSTPEDVRSLFERYGTVLEVELSMYNKTRSRGLAFVEMSSPEEALEAL 159
Query: 398 ENLEAYELEGRPLRLAWAXXXXXXXXXXXXXXXXXVHNLFIANLHFEARSRDLMDFFKDN 577
LE+YE EGR L+L +A NLF+ANL +EA S+DL +FF
Sbjct: 160 NKLESYEFEGRVLKLNYARPKKKKAPPPVVQRKPVTFNLFVANLSYEATSKDLREFFDSG 219
Query: 578 GVNVVSAEV----------------XNTKEEADAALSSFDGKEFMGRPIRVAHSKRFLRE 709
VVSAEV +K+EA+AALS F K FMGR +RVA SKRF++
Sbjct: 220 SSQVVSAEVVFHEDPRKSTGYGFVSFKSKKEANAALSEFQEKTFMGRSLRVAPSKRFVQP 279
Query: 710 ETKKTIQSQEQPSEL 754
+ + + ++ +EL
Sbjct: 280 LEESSAKPEDTSTEL 294
>ref|NP_192643.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|38603886|gb|AAR24688.1| At4g09040 [Arabidopsis
thaliana] gi|51968384|dbj|BAD42884.1| putative protein
[Arabidopsis thaliana] gi|51969486|dbj|BAD43435.1|
putative protein [Arabidopsis thaliana]
gi|51969588|dbj|BAD43486.1| putative protein
[Arabidopsis thaliana] gi|51970774|dbj|BAD44079.1|
putative protein [Arabidopsis thaliana]
gi|62319325|dbj|BAD94588.1| hypothetical protein
[Arabidopsis thaliana] gi|332657315|gb|AEE82715.1| RNA
recognition motif-containing protein [Arabidopsis
thaliana]
Length = 304
Score = 170 bits (431), Expect = 8e-40
Identities = 104/247 (42%), Positives = 147/247 (59%), Gaps = 19/247 (7%)
Frame = +2
Query: 68 HHHSTIPILLSPSTISLHSPYFSP--QRPYLYISHCSSETQQDIEEQSEDDSSKTRVLAQ 241
H H+T P + + +L S YFS Q P L S SS + +EE+ SKTR++AQ
Sbjct: 45 HRHATFPDSIPAKSRNLTS-YFSTTTQEPVLESSSSSSSAPEVVEEEI----SKTRLIAQ 99
Query: 242 NAPWTYTADDLRPLFEKYGTVHDIEVAMYNKTRSRGLVFVTMGSHEEAKSVLENLEAYEL 421
N PWT T +D+R LFEKYG+V DIE++M+ K R+RGLVF+ M S EEA + L++LE+ E
Sbjct: 100 NVPWTSTPEDIRSLFEKYGSVIDIEMSMHKKERNRGLVFIEMASPEEAATALKSLESCEY 159
Query: 422 EGRPLRLAWA-XXXXXXXXXXXXXXXXXVHNLFIANLHFEARSRDLMDFFKDNGVNVVSA 598
EGR L++ +A NLF+ANL FEAR++ L +FF + NVVS
Sbjct: 160 EGRRLKVDYAKTKKKKTYAPRETPSPVPTFNLFVANLAFEARAKHLKEFFDADTGNVVST 219
Query: 599 EV----------------XNTKEEADAALSSFDGKEFMGRPIRVAHSKRFLREETKKTIQ 730
EV TK++A+AAL F GK+F+GRPIR+A SK+F++ + K+ +Q
Sbjct: 220 EVIFHENPRRSSGYGFVSFKTKKQAEAALIEFQGKDFLGRPIRLAKSKQFVKLQAKEGLQ 279
Query: 731 SQEQPSE 751
E+ +E
Sbjct: 280 PPEEEAE 286
>ref|XP_003526568.2| PREDICTED: 30 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 345
Score = 170 bits (430), Expect = 1e-39
Identities = 102/238 (42%), Positives = 137/238 (57%), Gaps = 21/238 (8%)
Frame = +2
Query: 104 STISLHSPYFS----PQRPYLYISHCSSETQQDIEEQ-SEDDSSKTRVLAQNAPWTYTAD 268
S S H P S Q L +H S+ QQ E SE++ S+TR+LAQN PWT T +
Sbjct: 73 SLSSFHFPRLSLITTKQTLNLTPTHASTSEQQTEEPLVSEEEFSRTRLLAQNVPWTSTPE 132
Query: 269 DLRPLFEKYGTVHDIEVAMYNKTRSRGLVFVTMGSHEEAKSVLENLEAYELEGRPLRLAW 448
D+R LFEK+G V ++E++MY K R+RGL FV MGS EEA L NLE+YE EGR +++ +
Sbjct: 133 DIRTLFEKHGKVLEVELSMYKKNRNRGLAFVEMGSPEEALEALNNLESYEFEGRVIKVNY 192
Query: 449 AXXXXXXXXXXXXXXXXXVHNLFIANLHFEARSRDLMDFFKDNGVNVVSAEV-------- 604
A NLF+ANL +EA S+DL +FF VVSAEV
Sbjct: 193 ARPKKEKTAPPPVKPKVVTFNLFVANLSYEASSKDLKEFFDLGTGRVVSAEVVYRDNPRR 252
Query: 605 --------XNTKEEADAALSSFDGKEFMGRPIRVAHSKRFLREETKKTIQSQEQPSEL 754
+K+EA+AAL+ F GK FMGRPIRV +RF+++ + +S++ PSEL
Sbjct: 253 PSGYGFVSFKSKKEAEAALAEFQGKVFMGRPIRVDRGRRFVQQPGDGSAKSEDTPSEL 310
>dbj|BAD43393.1| putative protein [Arabidopsis thaliana]
Length = 304
Score = 170 bits (430), Expect = 1e-39
Identities = 104/247 (42%), Positives = 147/247 (59%), Gaps = 19/247 (7%)
Frame = +2
Query: 68 HHHSTIPILLSPSTISLHSPYFSP--QRPYLYISHCSSETQQDIEEQSEDDSSKTRVLAQ 241
H H+T P + + +L S YFS Q P L S SS + +EE+ SKTR++AQ
Sbjct: 45 HRHATFPDSIPAKSRNLTS-YFSTTTQEPVLDSSSSSSSAPEVVEEEI----SKTRLIAQ 99
Query: 242 NAPWTYTADDLRPLFEKYGTVHDIEVAMYNKTRSRGLVFVTMGSHEEAKSVLENLEAYEL 421
N PWT T +D+R LFEKYG+V DIE++M+ K R+RGLVF+ M S EEA + L++LE+ E
Sbjct: 100 NVPWTSTPEDIRSLFEKYGSVIDIEMSMHKKERNRGLVFIEMASPEEAATALKSLESCEY 159
Query: 422 EGRPLRLAWA-XXXXXXXXXXXXXXXXXVHNLFIANLHFEARSRDLMDFFKDNGVNVVSA 598
EGR L++ +A NLF+ANL FEAR++ L +FF + NVVS
Sbjct: 160 EGRRLKVDYAKTKKKKTYAPRETPSPVPTFNLFVANLAFEARAKHLKEFFDADTGNVVST 219
Query: 599 EV----------------XNTKEEADAALSSFDGKEFMGRPIRVAHSKRFLREETKKTIQ 730
EV TK++A+AAL F GK+F+GRPIR+A SK+F++ + K+ +Q
Sbjct: 220 EVIFHENPRRSSGYGFVSFKTKKQAEAALIEFQGKDFLGRPIRLAKSKQFVKLQAKEGLQ 279
Query: 731 SQEQPSE 751
E+ +E
Sbjct: 280 PPEEEAE 286
>gb|ACU23303.1| unknown [Glycine max]
Length = 315
Score = 170 bits (430), Expect = 1e-39
Identities = 102/238 (42%), Positives = 137/238 (57%), Gaps = 21/238 (8%)
Frame = +2
Query: 104 STISLHSPYFS----PQRPYLYISHCSSETQQDIEEQ-SEDDSSKTRVLAQNAPWTYTAD 268
S S H P S Q L +H S+ QQ E SE++ S+TR+LAQN PWT T +
Sbjct: 43 SLSSFHFPRLSLITTKQTLNLTPTHASTSEQQTEEPLVSEEEFSRTRLLAQNVPWTSTPE 102
Query: 269 DLRPLFEKYGTVHDIEVAMYNKTRSRGLVFVTMGSHEEAKSVLENLEAYELEGRPLRLAW 448
D+R LFEK+G V ++E++MY K R+RGL FV MGS EEA L NLE+YE EGR +++ +
Sbjct: 103 DIRTLFEKHGKVLEVELSMYKKNRNRGLAFVEMGSPEEALEALNNLESYEFEGRVIKVNY 162
Query: 449 AXXXXXXXXXXXXXXXXXVHNLFIANLHFEARSRDLMDFFKDNGVNVVSAEV-------- 604
A NLF+ANL +EA S+DL +FF VVSAEV
Sbjct: 163 ARPKKEKTAPPPVKPKVVTFNLFVANLSYEASSKDLKEFFDLGTGRVVSAEVVYRDNPRR 222
Query: 605 --------XNTKEEADAALSSFDGKEFMGRPIRVAHSKRFLREETKKTIQSQEQPSEL 754
+K+EA+AAL+ F GK FMGRPIRV +RF+++ + +S++ PSEL
Sbjct: 223 PSGYGFVSFKSKKEAEAALAEFQGKVFMGRPIRVDRGRRFVQQPGDGSAKSEDTPSEL 280
>gb|EMJ24372.1| hypothetical protein PRUPE_ppa009133mg [Prunus persica]
Length = 305
Score = 169 bits (428), Expect = 2e-39
Identities = 102/264 (38%), Positives = 151/264 (57%), Gaps = 30/264 (11%)
Frame = +2
Query: 68 HHHSTIPILLSPSTISLHSPYFSPQRPYL--------YISHCSSETQQDIEEQSE----- 208
H +T+ + S S++SL P+ + + ++ SS Q+ ++S
Sbjct: 32 HTPTTLSLSGSLSSLSLSLPHTHTRSSSITRTKRLSNFVFQFSSTAQEQALDESPVLEAE 91
Query: 209 -DDSSKTRVLAQNAPWTYTADDLRPLFEKYGTVHDIEVAMYNKTRSRGLVFVTMGSHEEA 385
++ S TR+LAQN PWT T +D+R LFEKYGTV D+E+AMYNKTR+RGL FVTMGS EEA
Sbjct: 92 PEEFSDTRLLAQNVPWTCTPEDIRTLFEKYGTVVDVELAMYNKTRNRGLAFVTMGSPEEA 151
Query: 386 KSVLENLEAYELEGRPLRLAWAXXXXXXXXXXXXXXXXXVHNLFIANLHFEARSRDLMDF 565
+ L NLE+ E+EGR +++A+A NL++ NL + ARS+DL +
Sbjct: 152 LAALNNLESSEMEGRIIKMAYAKPKKTKIPPPSSQPKPVTFNLYVENLPYGARSKDLKEL 211
Query: 566 FKDNGVNVVSAEV----------------XNTKEEADAALSSFDGKEFMGRPIRVAHSKR 697
F +VV+AEV +K+EA+AALS+F GK MGR IRVA K+
Sbjct: 212 FNSEDCSVVTAEVVFQGNPRRSAGYGFVGFKSKKEAEAALSAFHGKLLMGRRIRVARGKQ 271
Query: 698 FLREETKKTIQSQEQPSELISVAE 769
F++ +++ Q ++ +EL S+ E
Sbjct: 272 FVKVPKEESSQLGDESTELNSIVE 295
>gb|ESW08278.1| hypothetical protein PHAVU_009G033600g [Phaseolus vulgaris]
gi|561009372|gb|ESW08279.1| hypothetical protein
PHAVU_009G033600g [Phaseolus vulgaris]
Length = 306
Score = 168 bits (426), Expect = 3e-39
Identities = 92/212 (43%), Positives = 126/212 (59%), Gaps = 16/212 (7%)
Frame = +2
Query: 167 CSSETQQDIEEQSEDDSSKTRVLAQNAPWTYTADDLRPLFEKYGTVHDIEVAMYNKTRSR 346
C S ++Q + +E++ S+TR+LAQN PWT T +D+R LFEK+G V D+E++MY K R+R
Sbjct: 61 CVSTSEQQAQPVTEEEFSRTRLLAQNVPWTSTPEDIRSLFEKHGKVLDVELSMYKKDRNR 120
Query: 347 GLVFVTMGSHEEAKSVLENLEAYELEGRPLRLAWAXXXXXXXXXXXXXXXXXVHNLFIAN 526
GL FV MGS EEA L LE+YE EGR +R+ +A NLF+AN
Sbjct: 121 GLAFVEMGSPEEALEALNKLESYEFEGRVMRVNYARPKKKKTPPPVKPSSGVTFNLFVAN 180
Query: 527 LHFEARSRDLMDFFKDNGVNVVSAEV----------------XNTKEEADAALSSFDGKE 658
L +EA+S DL +FF VV AEV +K+EA+AALS F GK+
Sbjct: 181 LSYEAKSTDLKEFFDSGTGKVVRAEVVFHESPRKPSGYGFVSFKSKKEAEAALSEFQGKD 240
Query: 659 FMGRPIRVAHSKRFLREETKKTIQSQEQPSEL 754
FMGR IRV +RF+++ + +S + PSEL
Sbjct: 241 FMGRSIRVDRGRRFVQKPGDRNPKSVDTPSEL 272
>ref|XP_006288345.1| hypothetical protein CARUB_v10001593mg [Capsella rubella]
gi|565460694|ref|XP_006288346.1| hypothetical protein
CARUB_v10001593mg [Capsella rubella]
gi|482557051|gb|EOA21243.1| hypothetical protein
CARUB_v10001593mg [Capsella rubella]
gi|482557052|gb|EOA21244.1| hypothetical protein
CARUB_v10001593mg [Capsella rubella]
Length = 297
Score = 168 bits (425), Expect = 4e-39
Identities = 106/245 (43%), Positives = 144/245 (58%), Gaps = 26/245 (10%)
Frame = +2
Query: 95 LSPSTISLHSPYFSPQRPYLYISHCS-SETQQDIEEQS--------EDDSSKTRVLAQNA 247
LS ST SL S + R + S+CS + TQ+ I E S ED+ SKTR++AQN
Sbjct: 34 LSWSTSSLCSSVQTKSRNFT--SYCSVTTTQEPILESSSPSSSPEVEDEISKTRLIAQNV 91
Query: 248 PWTYTADDLRPLFEKYGTVHDIEVAMYNKTRSRGLVFVTMGSHEEAKSVLENLEAYELEG 427
PW T +D+R LFEKYG V DIE++M+ K R+RGLVF+ MGS EEA L+ LE+YE EG
Sbjct: 92 PWAATPEDIRSLFEKYGNVVDIEMSMHKKERNRGLVFIEMGSPEEAAEALKALESYEYEG 151
Query: 428 RPLRLAWA-XXXXXXXXXXXXXXXXXVHNLFIANLHFEARSRDLMDFFKDNGVNVVSAEV 604
R L++ +A NLF+ANL FEAR++ L +FF + NVVS EV
Sbjct: 152 RRLKVDYAKAKKKKTYAPREKPSPVPTFNLFVANLAFEARAKHLKEFFDADTGNVVSTEV 211
Query: 605 ----------------XNTKEEADAALSSFDGKEFMGRPIRVAHSKRFLREETKKTIQSQ 736
TK++A+AA+ F GK+FMGRPIR+A SK+F++ + K+ +Q
Sbjct: 212 IFHENPRRSSGYGFVSFKTKKQAEAAIIEFQGKDFMGRPIRLARSKQFVKLQAKEGLQPP 271
Query: 737 EQPSE 751
E+ E
Sbjct: 272 EEEVE 276