BLASTX nr result
ID: Atropa21_contig00002092
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00002092
(899 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004250997.1| PREDICTED: MKI67 FHA domain-interacting nucl... 126 1e-26
ref|XP_006349058.1| PREDICTED: uncharacterized RNA-binding prote... 125 3e-26
ref|XP_006347213.1| PREDICTED: uncharacterized RNA-binding prote... 120 9e-25
ref|XP_004241297.1| PREDICTED: MKI67 FHA domain-interacting nucl... 120 9e-25
ref|NP_001275247.1| uncharacterized LOC102594986 [Solanum tubero... 117 4e-24
gb|ABB87134.1| RNA binding protein-like protein [Solanum tuberosum] 117 4e-24
ref|XP_006347215.1| PREDICTED: uncharacterized RNA-binding prote... 100 1e-18
gb|EMJ27704.1| hypothetical protein PRUPE_ppa025985mg, partial [... 90 1e-15
ref|XP_006288622.1| hypothetical protein CARUB_v10001924mg [Caps... 90 1e-15
ref|XP_002316513.2| hypothetical protein POPTR_0010s24120g [Popu... 88 5e-15
ref|XP_002277092.2| PREDICTED: MKI67 FHA domain-interacting nucl... 87 6e-15
gb|EOY19184.1| RNA-binding (RRM/RBD/RNP motifs) family protein i... 86 1e-14
gb|ESW21664.1| hypothetical protein PHAVU_005G0893001g, partial ... 86 2e-14
ref|XP_002871104.1| RNA recognition motif-containing protein [Ar... 86 2e-14
ref|XP_006398917.1| hypothetical protein EUTSA_v10014607mg [Eutr... 85 4e-14
ref|NP_196080.1| RNA recognition motif-containing protein [Arabi... 85 4e-14
ref|XP_006430638.1| hypothetical protein CICLE_v10013752mg [Citr... 84 9e-14
gb|EOY19185.1| RNA-binding (RRM/RBD/RNP motifs) family protein i... 82 2e-13
ref|XP_004496980.1| PREDICTED: uncharacterized RNA-binding prote... 82 2e-13
ref|XP_004140894.1| PREDICTED: MKI67 FHA domain-interacting nucl... 82 2e-13
>ref|XP_004250997.1| PREDICTED: MKI67 FHA domain-interacting nucleolar
phosphoprotein-like [Solanum lycopersicum]
Length = 216
Score = 126 bits (316), Expect = 1e-26
Identities = 63/84 (75%), Positives = 65/84 (77%)
Frame = +3
Query: 648 MGAKARKKNITKTLKKGXXXXXXXXXXXXXXXXXLPLEGGPARKLPDTEVRESKATVLYI 827
MGAK RKK+ITK LKKG LPLEGGPARKLPDTEVRESKAT+LYI
Sbjct: 1 MGAKGRKKSITKKLKKGANEFSASSVSKDKAADFLPLEGGPARKLPDTEVRESKATILYI 60
Query: 828 GRIPHGFYENEMEGFFKQFGTIKR 899
GRIPHGFYENEMEGFFKQFGTIKR
Sbjct: 61 GRIPHGFYENEMEGFFKQFGTIKR 84
>ref|XP_006349058.1| PREDICTED: uncharacterized RNA-binding protein C1827.05c-like
[Solanum tuberosum]
Length = 216
Score = 125 bits (313), Expect = 3e-26
Identities = 62/84 (73%), Positives = 65/84 (77%)
Frame = +3
Query: 648 MGAKARKKNITKTLKKGXXXXXXXXXXXXXXXXXLPLEGGPARKLPDTEVRESKATVLYI 827
MGAK RKK+ITK LKKG LPLEGGPARKLPDTEVRESK+T+LYI
Sbjct: 1 MGAKGRKKSITKKLKKGASEFSASSVSKDKAPDFLPLEGGPARKLPDTEVRESKSTILYI 60
Query: 828 GRIPHGFYENEMEGFFKQFGTIKR 899
GRIPHGFYENEMEGFFKQFGTIKR
Sbjct: 61 GRIPHGFYENEMEGFFKQFGTIKR 84
>ref|XP_006347213.1| PREDICTED: uncharacterized RNA-binding protein C1827.05c-like
isoform X1 [Solanum tuberosum]
gi|565360925|ref|XP_006347214.1| PREDICTED:
uncharacterized RNA-binding protein C1827.05c-like
isoform X2 [Solanum tuberosum]
Length = 217
Score = 120 bits (300), Expect = 9e-25
Identities = 61/84 (72%), Positives = 63/84 (75%)
Frame = +3
Query: 648 MGAKARKKNITKTLKKGXXXXXXXXXXXXXXXXXLPLEGGPARKLPDTEVRESKATVLYI 827
MG KARKK ITK LKKG LPLEGGPA+KLP TEVRE+KATVLYI
Sbjct: 1 MGVKARKKAITKKLKKGASDFSASSASKDEAREFLPLEGGPAQKLPKTEVRENKATVLYI 60
Query: 828 GRIPHGFYENEMEGFFKQFGTIKR 899
GRIPHGFYENEMEGFFKQFGTIKR
Sbjct: 61 GRIPHGFYENEMEGFFKQFGTIKR 84
>ref|XP_004241297.1| PREDICTED: MKI67 FHA domain-interacting nucleolar
phosphoprotein-like [Solanum lycopersicum]
Length = 217
Score = 120 bits (300), Expect = 9e-25
Identities = 61/84 (72%), Positives = 63/84 (75%)
Frame = +3
Query: 648 MGAKARKKNITKTLKKGXXXXXXXXXXXXXXXXXLPLEGGPARKLPDTEVRESKATVLYI 827
MG KARKK ITK LKKG LPLEGGPA+KLP TEVRE+KATVLYI
Sbjct: 1 MGVKARKKAITKKLKKGASDFSASSASKDEAREFLPLEGGPAQKLPKTEVRENKATVLYI 60
Query: 828 GRIPHGFYENEMEGFFKQFGTIKR 899
GRIPHGFYENEMEGFFKQFGTIKR
Sbjct: 61 GRIPHGFYENEMEGFFKQFGTIKR 84
>ref|NP_001275247.1| uncharacterized LOC102594986 [Solanum tuberosum]
gi|413968566|gb|AFW90620.1| RNA binding protein-like
protein [Solanum tuberosum]
Length = 217
Score = 117 bits (294), Expect = 4e-24
Identities = 59/84 (70%), Positives = 63/84 (75%)
Frame = +3
Query: 648 MGAKARKKNITKTLKKGXXXXXXXXXXXXXXXXXLPLEGGPARKLPDTEVRESKATVLYI 827
MG KARKK ITK LKKG LPLEGGPA+KLP TE++E+KATVLYI
Sbjct: 1 MGVKARKKAITKKLKKGASDFSASSASKDEAREFLPLEGGPAQKLPKTELKENKATVLYI 60
Query: 828 GRIPHGFYENEMEGFFKQFGTIKR 899
GRIPHGFYENEMEGFFKQFGTIKR
Sbjct: 61 GRIPHGFYENEMEGFFKQFGTIKR 84
>gb|ABB87134.1| RNA binding protein-like protein [Solanum tuberosum]
Length = 217
Score = 117 bits (294), Expect = 4e-24
Identities = 59/84 (70%), Positives = 63/84 (75%)
Frame = +3
Query: 648 MGAKARKKNITKTLKKGXXXXXXXXXXXXXXXXXLPLEGGPARKLPDTEVRESKATVLYI 827
MG KARKK ITK LKKG LPLEGGPA+KLP TE++E+KATVLYI
Sbjct: 1 MGVKARKKAITKKLKKGASDFSASSASKDEAREFLPLEGGPAQKLPKTELKENKATVLYI 60
Query: 828 GRIPHGFYENEMEGFFKQFGTIKR 899
GRIPHGFYENEMEGFFKQFGTIKR
Sbjct: 61 GRIPHGFYENEMEGFFKQFGTIKR 84
>ref|XP_006347215.1| PREDICTED: uncharacterized RNA-binding protein C1827.05c-like
isoform X3 [Solanum tuberosum]
Length = 185
Score = 99.8 bits (247), Expect = 1e-18
Identities = 46/49 (93%), Positives = 48/49 (97%)
Frame = +3
Query: 753 PLEGGPARKLPDTEVRESKATVLYIGRIPHGFYENEMEGFFKQFGTIKR 899
PLEGGPA+KLP TEVRE+KATVLYIGRIPHGFYENEMEGFFKQFGTIKR
Sbjct: 4 PLEGGPAQKLPKTEVRENKATVLYIGRIPHGFYENEMEGFFKQFGTIKR 52
>gb|EMJ27704.1| hypothetical protein PRUPE_ppa025985mg, partial [Prunus persica]
Length = 226
Score = 90.1 bits (222), Expect = 1e-15
Identities = 53/105 (50%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Frame = +3
Query: 594 KKNVMSFIFGSTRIILTEMGAKARKKNITKTLKKGXXXXXXXXXXXXXXXXX---LPLEG 764
K + S +F +EMGAKA KK + K L K LPLEG
Sbjct: 6 KTLISSTLFSPDHCSCSEMGAKA-KKAMKKQLSKASAQLSVSTHNKEAAAAAADFLPLEG 64
Query: 765 GPARKLPDTEVRESKATVLYIGRIPHGFYENEMEGFFKQFGTIKR 899
GPARKLP+ + +E A VLYIGRIPHGFYE EMEGFF QFG IKR
Sbjct: 65 GPARKLPEEKPKEDVAKVLYIGRIPHGFYEKEMEGFFGQFGVIKR 109
>ref|XP_006288622.1| hypothetical protein CARUB_v10001924mg [Capsella rubella]
gi|482557328|gb|EOA21520.1| hypothetical protein
CARUB_v10001924mg [Capsella rubella]
Length = 220
Score = 89.7 bits (221), Expect = 1e-15
Identities = 49/87 (56%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
Frame = +3
Query: 648 MGAKARK---KNITKTLKKGXXXXXXXXXXXXXXXXXLPLEGGPARKLPDTEVRESKATV 818
MGAKA+K KN+ K LPLEGGPARK P T ESKATV
Sbjct: 1 MGAKAKKALKKNMKKISASAASSQLPLPQNPKPSADFLPLEGGPARKAPVTTPIESKATV 60
Query: 819 LYIGRIPHGFYENEMEGFFKQFGTIKR 899
LYIGRIPHGFYE E+E FF QFGT+KR
Sbjct: 61 LYIGRIPHGFYETEIEAFFSQFGTVKR 87
>ref|XP_002316513.2| hypothetical protein POPTR_0010s24120g [Populus trichocarpa]
gi|550330490|gb|EEF02684.2| hypothetical protein
POPTR_0010s24120g [Populus trichocarpa]
Length = 266
Score = 87.8 bits (216), Expect = 5e-15
Identities = 47/94 (50%), Positives = 55/94 (58%)
Frame = +3
Query: 618 FGSTRIILTEMGAKARKKNITKTLKKGXXXXXXXXXXXXXXXXXLPLEGGPARKLPDTEV 797
F S R + MGAKA+K K K LPLEGGPARKLP+ +
Sbjct: 40 FLSIRCLFITMGAKAKKSLKKKMSKISSSTSTQLVNGKQAAADFLPLEGGPARKLPELKE 99
Query: 798 RESKATVLYIGRIPHGFYENEMEGFFKQFGTIKR 899
+ K+ VLYIGRIPHGFYE EM+ +F QFGTIKR
Sbjct: 100 LKKKSGVLYIGRIPHGFYEEEMKAYFSQFGTIKR 133
>ref|XP_002277092.2| PREDICTED: MKI67 FHA domain-interacting nucleolar
phosphoprotein-like [Vitis vinifera]
gi|298204899|emb|CBI34206.3| unnamed protein product
[Vitis vinifera]
Length = 215
Score = 87.4 bits (215), Expect = 6e-15
Identities = 47/84 (55%), Positives = 54/84 (64%)
Frame = +3
Query: 648 MGAKARKKNITKTLKKGXXXXXXXXXXXXXXXXXLPLEGGPARKLPDTEVRESKATVLYI 827
MG KA+K I K+ KKG LPLEGGP +LP+ E ++ TVLYI
Sbjct: 1 MGTKAKKAMIKKS-KKGSSKLSVPGHKKAAADF-LPLEGGPGHELPEQEPPKNTGTVLYI 58
Query: 828 GRIPHGFYENEMEGFFKQFGTIKR 899
GRIPHGFYENEMEGFFKQFG +KR
Sbjct: 59 GRIPHGFYENEMEGFFKQFGAVKR 82
>gb|EOY19184.1| RNA-binding (RRM/RBD/RNP motifs) family protein isoform 1
[Theobroma cacao]
Length = 215
Score = 86.3 bits (212), Expect = 1e-14
Identities = 46/84 (54%), Positives = 56/84 (66%)
Frame = +3
Query: 648 MGAKARKKNITKTLKKGXXXXXXXXXXXXXXXXXLPLEGGPARKLPDTEVRESKATVLYI 827
MG KARK + KT+KK LPLEGGP+R+LP + +++KATVLYI
Sbjct: 1 MGLKARKA-LKKTVKKASSHFALSDSKTASADF-LPLEGGPSRELPGNKPQQNKATVLYI 58
Query: 828 GRIPHGFYENEMEGFFKQFGTIKR 899
GRIPHGFYE EME +F+QFG IKR
Sbjct: 59 GRIPHGFYEKEMEAYFQQFGAIKR 82
>gb|ESW21664.1| hypothetical protein PHAVU_005G0893001g, partial [Phaseolus
vulgaris]
Length = 85
Score = 85.9 bits (211), Expect = 2e-14
Identities = 46/84 (54%), Positives = 55/84 (65%)
Frame = +3
Query: 648 MGAKARKKNITKTLKKGXXXXXXXXXXXXXXXXXLPLEGGPARKLPDTEVRESKATVLYI 827
MG KA KK + K +K+ LPLEGGPARKLP+ ++ E+ ATVLY+
Sbjct: 1 MGTKA-KKAMKKNMKRASSNKPSQGADF------LPLEGGPARKLPEQKLPENTATVLYV 53
Query: 828 GRIPHGFYENEMEGFFKQFGTIKR 899
RIPHGFYE EMEG+F QFGTIKR
Sbjct: 54 SRIPHGFYEKEMEGYFGQFGTIKR 77
>ref|XP_002871104.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata] gi|297316941|gb|EFH47363.1| RNA recognition
motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 221
Score = 85.9 bits (211), Expect = 2e-14
Identities = 48/88 (54%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Frame = +3
Query: 648 MGAKARK---KNITKTLKKGXXXXXXXXXXXXXXXXXLPLEGGPARKLPDT-EVRESKAT 815
MGAKA+K KN+ K LPLEGGPARK P T + E+KAT
Sbjct: 1 MGAKAKKALKKNMKKIAASAASSQLPLPQNPKPSADFLPLEGGPARKAPVTSQPLENKAT 60
Query: 816 VLYIGRIPHGFYENEMEGFFKQFGTIKR 899
VLYIGRIPHGFYE E+E FF QFGT+KR
Sbjct: 61 VLYIGRIPHGFYETEIEAFFSQFGTVKR 88
>ref|XP_006398917.1| hypothetical protein EUTSA_v10014607mg [Eutrema salsugineum]
gi|557100007|gb|ESQ40370.1| hypothetical protein
EUTSA_v10014607mg [Eutrema salsugineum]
Length = 223
Score = 84.7 bits (208), Expect = 4e-14
Identities = 48/90 (53%), Positives = 56/90 (62%), Gaps = 6/90 (6%)
Frame = +3
Query: 648 MGAKARKKNITKTLKK------GXXXXXXXXXXXXXXXXXLPLEGGPARKLPDTEVRESK 809
MGAKA KK + K +KK LPLEGGPARK P T+ E+K
Sbjct: 1 MGAKA-KKALKKNMKKISASAASSSQQLAVPQNPKPSADFLPLEGGPARKAPVTKPLENK 59
Query: 810 ATVLYIGRIPHGFYENEMEGFFKQFGTIKR 899
ATVLYIGRIPHGFYE E+E FF+QFG++KR
Sbjct: 60 ATVLYIGRIPHGFYEAEIEAFFQQFGSVKR 89
>ref|NP_196080.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|14190443|gb|AAK55702.1|AF378899_1
AT5g04600/T32M21_200 [Arabidopsis thaliana]
gi|7406464|emb|CAB85566.1| rna binding protein-like
[Arabidopsis thaliana] gi|15810057|gb|AAL06954.1|
AT5g04600/T32M21_200 [Arabidopsis thaliana]
gi|17380696|gb|AAL36178.1| putative rna binding protein
[Arabidopsis thaliana] gi|21689805|gb|AAM67546.1|
putative RNA binding protein [Arabidopsis thaliana]
gi|332003380|gb|AED90763.1| RNA recognition
motif-containing protein [Arabidopsis thaliana]
Length = 222
Score = 84.7 bits (208), Expect = 4e-14
Identities = 47/88 (53%), Positives = 53/88 (60%), Gaps = 4/88 (4%)
Frame = +3
Query: 648 MGAKARK---KNITKTLKKGXXXXXXXXXXXXXXXXXLPLEGGPARKLP-DTEVRESKAT 815
MGAKA+K KN+ K LPLEGGPARK P T ++KAT
Sbjct: 1 MGAKAKKALKKNMKKVAASASSSQLPLPQNPKPSADFLPLEGGPARKAPVTTPPLQNKAT 60
Query: 816 VLYIGRIPHGFYENEMEGFFKQFGTIKR 899
VLYIGRIPHGFYE E+E FF QFGT+KR
Sbjct: 61 VLYIGRIPHGFYETEIEAFFSQFGTVKR 88
>ref|XP_006430638.1| hypothetical protein CICLE_v10013752mg [Citrus clementina]
gi|557532695|gb|ESR43878.1| hypothetical protein
CICLE_v10013752mg [Citrus clementina]
Length = 230
Score = 83.6 bits (205), Expect = 9e-14
Identities = 47/84 (55%), Positives = 52/84 (61%)
Frame = +3
Query: 648 MGAKARKKNITKTLKKGXXXXXXXXXXXXXXXXXLPLEGGPARKLPDTEVRESKATVLYI 827
MGAK +KK + K LKK LPLEGGP RKLP+ + +KA VLYI
Sbjct: 1 MGAK-QKKALKKNLKK-VSSQLPVSSDRKDAADFLPLEGGPGRKLPEEKPLVNKAAVLYI 58
Query: 828 GRIPHGFYENEMEGFFKQFGTIKR 899
GRIPHGFYE EM FF QFGTIKR
Sbjct: 59 GRIPHGFYEKEMHAFFSQFGTIKR 82
>gb|EOY19185.1| RNA-binding (RRM/RBD/RNP motifs) family protein isoform 2, partial
[Theobroma cacao]
Length = 212
Score = 82.4 bits (202), Expect = 2e-13
Identities = 36/50 (72%), Positives = 44/50 (88%)
Frame = +3
Query: 750 LPLEGGPARKLPDTEVRESKATVLYIGRIPHGFYENEMEGFFKQFGTIKR 899
LPLEGGP+R+LP + +++KATVLYIGRIPHGFYE EME +F+QFG IKR
Sbjct: 30 LPLEGGPSRELPGNKPQQNKATVLYIGRIPHGFYEKEMEAYFQQFGAIKR 79
>ref|XP_004496980.1| PREDICTED: uncharacterized RNA-binding protein C1827.05c-like
isoform X1 [Cicer arietinum]
gi|502120496|ref|XP_004496981.1| PREDICTED:
uncharacterized RNA-binding protein C1827.05c-like
isoform X2 [Cicer arietinum]
gi|502120500|ref|XP_004496982.1| PREDICTED:
uncharacterized RNA-binding protein C1827.05c-like
isoform X3 [Cicer arietinum]
gi|502120503|ref|XP_004496983.1| PREDICTED:
uncharacterized RNA-binding protein C1827.05c-like
isoform X4 [Cicer arietinum]
Length = 209
Score = 82.4 bits (202), Expect = 2e-13
Identities = 45/84 (53%), Positives = 54/84 (64%)
Frame = +3
Query: 648 MGAKARKKNITKTLKKGXXXXXXXXXXXXXXXXXLPLEGGPARKLPDTEVRESKATVLYI 827
MG KA KK + K+LKK LPLEGGP RK+P+ + E+ ++VLYI
Sbjct: 1 MGTKA-KKAMKKSLKKATAIKPSQGADF------LPLEGGPGRKIPEQKPLENTSSVLYI 53
Query: 828 GRIPHGFYENEMEGFFKQFGTIKR 899
GRIPHGFYE EME +F QFGTIKR
Sbjct: 54 GRIPHGFYEKEMEAYFGQFGTIKR 77
>ref|XP_004140894.1| PREDICTED: MKI67 FHA domain-interacting nucleolar
phosphoprotein-like [Cucumis sativus]
Length = 212
Score = 82.4 bits (202), Expect = 2e-13
Identities = 46/84 (54%), Positives = 50/84 (59%)
Frame = +3
Query: 648 MGAKARKKNITKTLKKGXXXXXXXXXXXXXXXXXLPLEGGPARKLPDTEVRESKATVLYI 827
MGAKARK +KK LPLEGGP RKL + ES ATVLYI
Sbjct: 1 MGAKARK-----AMKKKLNKATPLSSDKKESADFLPLEGGPGRKLSVQKPLESTATVLYI 55
Query: 828 GRIPHGFYENEMEGFFKQFGTIKR 899
GRIPHGF+E EMEGFF QFG +KR
Sbjct: 56 GRIPHGFFEKEMEGFFGQFGKVKR 79