BLASTX nr result

ID: Atropa21_contig00002092 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00002092
         (899 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004250997.1| PREDICTED: MKI67 FHA domain-interacting nucl...   126   1e-26
ref|XP_006349058.1| PREDICTED: uncharacterized RNA-binding prote...   125   3e-26
ref|XP_006347213.1| PREDICTED: uncharacterized RNA-binding prote...   120   9e-25
ref|XP_004241297.1| PREDICTED: MKI67 FHA domain-interacting nucl...   120   9e-25
ref|NP_001275247.1| uncharacterized LOC102594986 [Solanum tubero...   117   4e-24
gb|ABB87134.1| RNA binding protein-like protein [Solanum tuberosum]   117   4e-24
ref|XP_006347215.1| PREDICTED: uncharacterized RNA-binding prote...   100   1e-18
gb|EMJ27704.1| hypothetical protein PRUPE_ppa025985mg, partial [...    90   1e-15
ref|XP_006288622.1| hypothetical protein CARUB_v10001924mg [Caps...    90   1e-15
ref|XP_002316513.2| hypothetical protein POPTR_0010s24120g [Popu...    88   5e-15
ref|XP_002277092.2| PREDICTED: MKI67 FHA domain-interacting nucl...    87   6e-15
gb|EOY19184.1| RNA-binding (RRM/RBD/RNP motifs) family protein i...    86   1e-14
gb|ESW21664.1| hypothetical protein PHAVU_005G0893001g, partial ...    86   2e-14
ref|XP_002871104.1| RNA recognition motif-containing protein [Ar...    86   2e-14
ref|XP_006398917.1| hypothetical protein EUTSA_v10014607mg [Eutr...    85   4e-14
ref|NP_196080.1| RNA recognition motif-containing protein [Arabi...    85   4e-14
ref|XP_006430638.1| hypothetical protein CICLE_v10013752mg [Citr...    84   9e-14
gb|EOY19185.1| RNA-binding (RRM/RBD/RNP motifs) family protein i...    82   2e-13
ref|XP_004496980.1| PREDICTED: uncharacterized RNA-binding prote...    82   2e-13
ref|XP_004140894.1| PREDICTED: MKI67 FHA domain-interacting nucl...    82   2e-13

>ref|XP_004250997.1| PREDICTED: MKI67 FHA domain-interacting nucleolar
           phosphoprotein-like [Solanum lycopersicum]
          Length = 216

 Score =  126 bits (316), Expect = 1e-26
 Identities = 63/84 (75%), Positives = 65/84 (77%)
 Frame = +3

Query: 648 MGAKARKKNITKTLKKGXXXXXXXXXXXXXXXXXLPLEGGPARKLPDTEVRESKATVLYI 827
           MGAK RKK+ITK LKKG                 LPLEGGPARKLPDTEVRESKAT+LYI
Sbjct: 1   MGAKGRKKSITKKLKKGANEFSASSVSKDKAADFLPLEGGPARKLPDTEVRESKATILYI 60

Query: 828 GRIPHGFYENEMEGFFKQFGTIKR 899
           GRIPHGFYENEMEGFFKQFGTIKR
Sbjct: 61  GRIPHGFYENEMEGFFKQFGTIKR 84


>ref|XP_006349058.1| PREDICTED: uncharacterized RNA-binding protein C1827.05c-like
           [Solanum tuberosum]
          Length = 216

 Score =  125 bits (313), Expect = 3e-26
 Identities = 62/84 (73%), Positives = 65/84 (77%)
 Frame = +3

Query: 648 MGAKARKKNITKTLKKGXXXXXXXXXXXXXXXXXLPLEGGPARKLPDTEVRESKATVLYI 827
           MGAK RKK+ITK LKKG                 LPLEGGPARKLPDTEVRESK+T+LYI
Sbjct: 1   MGAKGRKKSITKKLKKGASEFSASSVSKDKAPDFLPLEGGPARKLPDTEVRESKSTILYI 60

Query: 828 GRIPHGFYENEMEGFFKQFGTIKR 899
           GRIPHGFYENEMEGFFKQFGTIKR
Sbjct: 61  GRIPHGFYENEMEGFFKQFGTIKR 84


>ref|XP_006347213.1| PREDICTED: uncharacterized RNA-binding protein C1827.05c-like
           isoform X1 [Solanum tuberosum]
           gi|565360925|ref|XP_006347214.1| PREDICTED:
           uncharacterized RNA-binding protein C1827.05c-like
           isoform X2 [Solanum tuberosum]
          Length = 217

 Score =  120 bits (300), Expect = 9e-25
 Identities = 61/84 (72%), Positives = 63/84 (75%)
 Frame = +3

Query: 648 MGAKARKKNITKTLKKGXXXXXXXXXXXXXXXXXLPLEGGPARKLPDTEVRESKATVLYI 827
           MG KARKK ITK LKKG                 LPLEGGPA+KLP TEVRE+KATVLYI
Sbjct: 1   MGVKARKKAITKKLKKGASDFSASSASKDEAREFLPLEGGPAQKLPKTEVRENKATVLYI 60

Query: 828 GRIPHGFYENEMEGFFKQFGTIKR 899
           GRIPHGFYENEMEGFFKQFGTIKR
Sbjct: 61  GRIPHGFYENEMEGFFKQFGTIKR 84


>ref|XP_004241297.1| PREDICTED: MKI67 FHA domain-interacting nucleolar
           phosphoprotein-like [Solanum lycopersicum]
          Length = 217

 Score =  120 bits (300), Expect = 9e-25
 Identities = 61/84 (72%), Positives = 63/84 (75%)
 Frame = +3

Query: 648 MGAKARKKNITKTLKKGXXXXXXXXXXXXXXXXXLPLEGGPARKLPDTEVRESKATVLYI 827
           MG KARKK ITK LKKG                 LPLEGGPA+KLP TEVRE+KATVLYI
Sbjct: 1   MGVKARKKAITKKLKKGASDFSASSASKDEAREFLPLEGGPAQKLPKTEVRENKATVLYI 60

Query: 828 GRIPHGFYENEMEGFFKQFGTIKR 899
           GRIPHGFYENEMEGFFKQFGTIKR
Sbjct: 61  GRIPHGFYENEMEGFFKQFGTIKR 84


>ref|NP_001275247.1| uncharacterized LOC102594986 [Solanum tuberosum]
           gi|413968566|gb|AFW90620.1| RNA binding protein-like
           protein [Solanum tuberosum]
          Length = 217

 Score =  117 bits (294), Expect = 4e-24
 Identities = 59/84 (70%), Positives = 63/84 (75%)
 Frame = +3

Query: 648 MGAKARKKNITKTLKKGXXXXXXXXXXXXXXXXXLPLEGGPARKLPDTEVRESKATVLYI 827
           MG KARKK ITK LKKG                 LPLEGGPA+KLP TE++E+KATVLYI
Sbjct: 1   MGVKARKKAITKKLKKGASDFSASSASKDEAREFLPLEGGPAQKLPKTELKENKATVLYI 60

Query: 828 GRIPHGFYENEMEGFFKQFGTIKR 899
           GRIPHGFYENEMEGFFKQFGTIKR
Sbjct: 61  GRIPHGFYENEMEGFFKQFGTIKR 84


>gb|ABB87134.1| RNA binding protein-like protein [Solanum tuberosum]
          Length = 217

 Score =  117 bits (294), Expect = 4e-24
 Identities = 59/84 (70%), Positives = 63/84 (75%)
 Frame = +3

Query: 648 MGAKARKKNITKTLKKGXXXXXXXXXXXXXXXXXLPLEGGPARKLPDTEVRESKATVLYI 827
           MG KARKK ITK LKKG                 LPLEGGPA+KLP TE++E+KATVLYI
Sbjct: 1   MGVKARKKAITKKLKKGASDFSASSASKDEAREFLPLEGGPAQKLPKTELKENKATVLYI 60

Query: 828 GRIPHGFYENEMEGFFKQFGTIKR 899
           GRIPHGFYENEMEGFFKQFGTIKR
Sbjct: 61  GRIPHGFYENEMEGFFKQFGTIKR 84


>ref|XP_006347215.1| PREDICTED: uncharacterized RNA-binding protein C1827.05c-like
           isoform X3 [Solanum tuberosum]
          Length = 185

 Score = 99.8 bits (247), Expect = 1e-18
 Identities = 46/49 (93%), Positives = 48/49 (97%)
 Frame = +3

Query: 753 PLEGGPARKLPDTEVRESKATVLYIGRIPHGFYENEMEGFFKQFGTIKR 899
           PLEGGPA+KLP TEVRE+KATVLYIGRIPHGFYENEMEGFFKQFGTIKR
Sbjct: 4   PLEGGPAQKLPKTEVRENKATVLYIGRIPHGFYENEMEGFFKQFGTIKR 52


>gb|EMJ27704.1| hypothetical protein PRUPE_ppa025985mg, partial [Prunus persica]
          Length = 226

 Score = 90.1 bits (222), Expect = 1e-15
 Identities = 53/105 (50%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
 Frame = +3

Query: 594 KKNVMSFIFGSTRIILTEMGAKARKKNITKTLKKGXXXXXXXXXXXXXXXXX---LPLEG 764
           K  + S +F       +EMGAKA KK + K L K                     LPLEG
Sbjct: 6   KTLISSTLFSPDHCSCSEMGAKA-KKAMKKQLSKASAQLSVSTHNKEAAAAAADFLPLEG 64

Query: 765 GPARKLPDTEVRESKATVLYIGRIPHGFYENEMEGFFKQFGTIKR 899
           GPARKLP+ + +E  A VLYIGRIPHGFYE EMEGFF QFG IKR
Sbjct: 65  GPARKLPEEKPKEDVAKVLYIGRIPHGFYEKEMEGFFGQFGVIKR 109


>ref|XP_006288622.1| hypothetical protein CARUB_v10001924mg [Capsella rubella]
           gi|482557328|gb|EOA21520.1| hypothetical protein
           CARUB_v10001924mg [Capsella rubella]
          Length = 220

 Score = 89.7 bits (221), Expect = 1e-15
 Identities = 49/87 (56%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
 Frame = +3

Query: 648 MGAKARK---KNITKTLKKGXXXXXXXXXXXXXXXXXLPLEGGPARKLPDTEVRESKATV 818
           MGAKA+K   KN+ K                      LPLEGGPARK P T   ESKATV
Sbjct: 1   MGAKAKKALKKNMKKISASAASSQLPLPQNPKPSADFLPLEGGPARKAPVTTPIESKATV 60

Query: 819 LYIGRIPHGFYENEMEGFFKQFGTIKR 899
           LYIGRIPHGFYE E+E FF QFGT+KR
Sbjct: 61  LYIGRIPHGFYETEIEAFFSQFGTVKR 87


>ref|XP_002316513.2| hypothetical protein POPTR_0010s24120g [Populus trichocarpa]
           gi|550330490|gb|EEF02684.2| hypothetical protein
           POPTR_0010s24120g [Populus trichocarpa]
          Length = 266

 Score = 87.8 bits (216), Expect = 5e-15
 Identities = 47/94 (50%), Positives = 55/94 (58%)
 Frame = +3

Query: 618 FGSTRIILTEMGAKARKKNITKTLKKGXXXXXXXXXXXXXXXXXLPLEGGPARKLPDTEV 797
           F S R +   MGAKA+K    K  K                   LPLEGGPARKLP+ + 
Sbjct: 40  FLSIRCLFITMGAKAKKSLKKKMSKISSSTSTQLVNGKQAAADFLPLEGGPARKLPELKE 99

Query: 798 RESKATVLYIGRIPHGFYENEMEGFFKQFGTIKR 899
            + K+ VLYIGRIPHGFYE EM+ +F QFGTIKR
Sbjct: 100 LKKKSGVLYIGRIPHGFYEEEMKAYFSQFGTIKR 133


>ref|XP_002277092.2| PREDICTED: MKI67 FHA domain-interacting nucleolar
           phosphoprotein-like [Vitis vinifera]
           gi|298204899|emb|CBI34206.3| unnamed protein product
           [Vitis vinifera]
          Length = 215

 Score = 87.4 bits (215), Expect = 6e-15
 Identities = 47/84 (55%), Positives = 54/84 (64%)
 Frame = +3

Query: 648 MGAKARKKNITKTLKKGXXXXXXXXXXXXXXXXXLPLEGGPARKLPDTEVRESKATVLYI 827
           MG KA+K  I K+ KKG                 LPLEGGP  +LP+ E  ++  TVLYI
Sbjct: 1   MGTKAKKAMIKKS-KKGSSKLSVPGHKKAAADF-LPLEGGPGHELPEQEPPKNTGTVLYI 58

Query: 828 GRIPHGFYENEMEGFFKQFGTIKR 899
           GRIPHGFYENEMEGFFKQFG +KR
Sbjct: 59  GRIPHGFYENEMEGFFKQFGAVKR 82


>gb|EOY19184.1| RNA-binding (RRM/RBD/RNP motifs) family protein isoform 1
           [Theobroma cacao]
          Length = 215

 Score = 86.3 bits (212), Expect = 1e-14
 Identities = 46/84 (54%), Positives = 56/84 (66%)
 Frame = +3

Query: 648 MGAKARKKNITKTLKKGXXXXXXXXXXXXXXXXXLPLEGGPARKLPDTEVRESKATVLYI 827
           MG KARK  + KT+KK                  LPLEGGP+R+LP  + +++KATVLYI
Sbjct: 1   MGLKARKA-LKKTVKKASSHFALSDSKTASADF-LPLEGGPSRELPGNKPQQNKATVLYI 58

Query: 828 GRIPHGFYENEMEGFFKQFGTIKR 899
           GRIPHGFYE EME +F+QFG IKR
Sbjct: 59  GRIPHGFYEKEMEAYFQQFGAIKR 82


>gb|ESW21664.1| hypothetical protein PHAVU_005G0893001g, partial [Phaseolus
           vulgaris]
          Length = 85

 Score = 85.9 bits (211), Expect = 2e-14
 Identities = 46/84 (54%), Positives = 55/84 (65%)
 Frame = +3

Query: 648 MGAKARKKNITKTLKKGXXXXXXXXXXXXXXXXXLPLEGGPARKLPDTEVRESKATVLYI 827
           MG KA KK + K +K+                  LPLEGGPARKLP+ ++ E+ ATVLY+
Sbjct: 1   MGTKA-KKAMKKNMKRASSNKPSQGADF------LPLEGGPARKLPEQKLPENTATVLYV 53

Query: 828 GRIPHGFYENEMEGFFKQFGTIKR 899
            RIPHGFYE EMEG+F QFGTIKR
Sbjct: 54  SRIPHGFYEKEMEGYFGQFGTIKR 77


>ref|XP_002871104.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
           lyrata] gi|297316941|gb|EFH47363.1| RNA recognition
           motif-containing protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 221

 Score = 85.9 bits (211), Expect = 2e-14
 Identities = 48/88 (54%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
 Frame = +3

Query: 648 MGAKARK---KNITKTLKKGXXXXXXXXXXXXXXXXXLPLEGGPARKLPDT-EVRESKAT 815
           MGAKA+K   KN+ K                      LPLEGGPARK P T +  E+KAT
Sbjct: 1   MGAKAKKALKKNMKKIAASAASSQLPLPQNPKPSADFLPLEGGPARKAPVTSQPLENKAT 60

Query: 816 VLYIGRIPHGFYENEMEGFFKQFGTIKR 899
           VLYIGRIPHGFYE E+E FF QFGT+KR
Sbjct: 61  VLYIGRIPHGFYETEIEAFFSQFGTVKR 88


>ref|XP_006398917.1| hypothetical protein EUTSA_v10014607mg [Eutrema salsugineum]
           gi|557100007|gb|ESQ40370.1| hypothetical protein
           EUTSA_v10014607mg [Eutrema salsugineum]
          Length = 223

 Score = 84.7 bits (208), Expect = 4e-14
 Identities = 48/90 (53%), Positives = 56/90 (62%), Gaps = 6/90 (6%)
 Frame = +3

Query: 648 MGAKARKKNITKTLKK------GXXXXXXXXXXXXXXXXXLPLEGGPARKLPDTEVRESK 809
           MGAKA KK + K +KK                        LPLEGGPARK P T+  E+K
Sbjct: 1   MGAKA-KKALKKNMKKISASAASSSQQLAVPQNPKPSADFLPLEGGPARKAPVTKPLENK 59

Query: 810 ATVLYIGRIPHGFYENEMEGFFKQFGTIKR 899
           ATVLYIGRIPHGFYE E+E FF+QFG++KR
Sbjct: 60  ATVLYIGRIPHGFYEAEIEAFFQQFGSVKR 89


>ref|NP_196080.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
           gi|14190443|gb|AAK55702.1|AF378899_1
           AT5g04600/T32M21_200 [Arabidopsis thaliana]
           gi|7406464|emb|CAB85566.1| rna binding protein-like
           [Arabidopsis thaliana] gi|15810057|gb|AAL06954.1|
           AT5g04600/T32M21_200 [Arabidopsis thaliana]
           gi|17380696|gb|AAL36178.1| putative rna binding protein
           [Arabidopsis thaliana] gi|21689805|gb|AAM67546.1|
           putative RNA binding protein [Arabidopsis thaliana]
           gi|332003380|gb|AED90763.1| RNA recognition
           motif-containing protein [Arabidopsis thaliana]
          Length = 222

 Score = 84.7 bits (208), Expect = 4e-14
 Identities = 47/88 (53%), Positives = 53/88 (60%), Gaps = 4/88 (4%)
 Frame = +3

Query: 648 MGAKARK---KNITKTLKKGXXXXXXXXXXXXXXXXXLPLEGGPARKLP-DTEVRESKAT 815
           MGAKA+K   KN+ K                      LPLEGGPARK P  T   ++KAT
Sbjct: 1   MGAKAKKALKKNMKKVAASASSSQLPLPQNPKPSADFLPLEGGPARKAPVTTPPLQNKAT 60

Query: 816 VLYIGRIPHGFYENEMEGFFKQFGTIKR 899
           VLYIGRIPHGFYE E+E FF QFGT+KR
Sbjct: 61  VLYIGRIPHGFYETEIEAFFSQFGTVKR 88


>ref|XP_006430638.1| hypothetical protein CICLE_v10013752mg [Citrus clementina]
           gi|557532695|gb|ESR43878.1| hypothetical protein
           CICLE_v10013752mg [Citrus clementina]
          Length = 230

 Score = 83.6 bits (205), Expect = 9e-14
 Identities = 47/84 (55%), Positives = 52/84 (61%)
 Frame = +3

Query: 648 MGAKARKKNITKTLKKGXXXXXXXXXXXXXXXXXLPLEGGPARKLPDTEVRESKATVLYI 827
           MGAK +KK + K LKK                  LPLEGGP RKLP+ +   +KA VLYI
Sbjct: 1   MGAK-QKKALKKNLKK-VSSQLPVSSDRKDAADFLPLEGGPGRKLPEEKPLVNKAAVLYI 58

Query: 828 GRIPHGFYENEMEGFFKQFGTIKR 899
           GRIPHGFYE EM  FF QFGTIKR
Sbjct: 59  GRIPHGFYEKEMHAFFSQFGTIKR 82


>gb|EOY19185.1| RNA-binding (RRM/RBD/RNP motifs) family protein isoform 2, partial
           [Theobroma cacao]
          Length = 212

 Score = 82.4 bits (202), Expect = 2e-13
 Identities = 36/50 (72%), Positives = 44/50 (88%)
 Frame = +3

Query: 750 LPLEGGPARKLPDTEVRESKATVLYIGRIPHGFYENEMEGFFKQFGTIKR 899
           LPLEGGP+R+LP  + +++KATVLYIGRIPHGFYE EME +F+QFG IKR
Sbjct: 30  LPLEGGPSRELPGNKPQQNKATVLYIGRIPHGFYEKEMEAYFQQFGAIKR 79


>ref|XP_004496980.1| PREDICTED: uncharacterized RNA-binding protein C1827.05c-like
           isoform X1 [Cicer arietinum]
           gi|502120496|ref|XP_004496981.1| PREDICTED:
           uncharacterized RNA-binding protein C1827.05c-like
           isoform X2 [Cicer arietinum]
           gi|502120500|ref|XP_004496982.1| PREDICTED:
           uncharacterized RNA-binding protein C1827.05c-like
           isoform X3 [Cicer arietinum]
           gi|502120503|ref|XP_004496983.1| PREDICTED:
           uncharacterized RNA-binding protein C1827.05c-like
           isoform X4 [Cicer arietinum]
          Length = 209

 Score = 82.4 bits (202), Expect = 2e-13
 Identities = 45/84 (53%), Positives = 54/84 (64%)
 Frame = +3

Query: 648 MGAKARKKNITKTLKKGXXXXXXXXXXXXXXXXXLPLEGGPARKLPDTEVRESKATVLYI 827
           MG KA KK + K+LKK                  LPLEGGP RK+P+ +  E+ ++VLYI
Sbjct: 1   MGTKA-KKAMKKSLKKATAIKPSQGADF------LPLEGGPGRKIPEQKPLENTSSVLYI 53

Query: 828 GRIPHGFYENEMEGFFKQFGTIKR 899
           GRIPHGFYE EME +F QFGTIKR
Sbjct: 54  GRIPHGFYEKEMEAYFGQFGTIKR 77


>ref|XP_004140894.1| PREDICTED: MKI67 FHA domain-interacting nucleolar
           phosphoprotein-like [Cucumis sativus]
          Length = 212

 Score = 82.4 bits (202), Expect = 2e-13
 Identities = 46/84 (54%), Positives = 50/84 (59%)
 Frame = +3

Query: 648 MGAKARKKNITKTLKKGXXXXXXXXXXXXXXXXXLPLEGGPARKLPDTEVRESKATVLYI 827
           MGAKARK      +KK                  LPLEGGP RKL   +  ES ATVLYI
Sbjct: 1   MGAKARK-----AMKKKLNKATPLSSDKKESADFLPLEGGPGRKLSVQKPLESTATVLYI 55

Query: 828 GRIPHGFYENEMEGFFKQFGTIKR 899
           GRIPHGF+E EMEGFF QFG +KR
Sbjct: 56  GRIPHGFFEKEMEGFFGQFGKVKR 79


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