BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00002061
         (662 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001275094.1| single-stranded DNA binding protein precurso...   172   1e-40
ref|XP_004246655.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor...   169   9e-40
sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A,...   163   4e-38
sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, c...   156   5e-36
ref|XP_006363666.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor...   144   3e-32
ref|XP_006363665.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor...   144   3e-32
ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   138   2e-30
sp|Q08937.1|ROC2_NICSY RecName: Full=29 kDa ribonucleoprotein B,...   134   2e-29
sp|P49314.1|ROC2_NICPL RecName: Full=31 kDa ribonucleoprotein, c...   134   3e-29
ref|XP_006428771.1| hypothetical protein CICLE_v10012331mg [Citr...   131   2e-28
ref|XP_006428770.1| hypothetical protein CICLE_v10012331mg [Citr...   131   2e-28
ref|XP_006428769.1| hypothetical protein CICLE_v10012331mg [Citr...   131   2e-28
ref|XP_006428768.1| hypothetical protein CICLE_v10012331mg [Citr...   131   2e-28
ref|XP_006428767.1| hypothetical protein CICLE_v10012331mg [Citr...   131   2e-28
gb|AAA79045.1| 24 kDa RNA binding protein, partial [Spinacia ole...   131   2e-28
ref|XP_006294745.1| hypothetical protein CARUB_v10023790mg [Caps...   129   8e-28
ref|XP_006291486.1| hypothetical protein CARUB_v10017634mg [Caps...   128   1e-27
ref|XP_004304439.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor...   128   2e-27
gb|EMJ06843.1| hypothetical protein PRUPE_ppa009295mg [Prunus pe...   127   2e-27
gb|EXC16209.1| 29 kDa ribonucleoprotein B [Morus notabilis]           127   3e-27

>ref|NP_001275094.1| single-stranded DNA binding protein precursor [Solanum tuberosum]
           gi|17432522|gb|AAL39067.1|AF389431_1 single-stranded DNA
           binding protein precursor [Solanum tuberosum]
          Length = 289

 Score =  172 bits (435), Expect = 1e-40
 Identities = 96/122 (78%), Positives = 101/122 (82%)
 Frame = +2

Query: 296 RTFESCISSRFLRNVTLSDFDQIEEEVEGFGGDESDQGLSDDGVGGAPSYERNDSPDLKI 475
           R FES   SRF+R VTLSDFDQIEE VE    DE + GLSD+G   A   ERN +PDLKI
Sbjct: 49  RNFES---SRFVRKVTLSDFDQIEE-VEAGDDDEEEGGLSDEG---ASYEERNANPDLKI 101

Query: 476 FVGNLPFSVDSAALAGLFEQAGDVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFN 655
           FVGNLPFSVDSAALA LFE+AGDVEMVEVIYDKLTGRSRGFGFVTMSSKE VEAACQQFN
Sbjct: 102 FVGNLPFSVDSAALAELFERAGDVEMVEVIYDKLTGRSRGFGFVTMSSKEAVEAACQQFN 161

Query: 656 GY 661
           GY
Sbjct: 162 GY 163



 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 46/129 (35%), Positives = 62/129 (48%), Gaps = 16/129 (12%)
 Frame = +2

Query: 320 SRFLRNVTLSDFDQIEEEVEGFGGDESDQGLSDDGVGGAPSYERNDSPDL---------- 469
           SR    VT+S  + +E   + F G E D        G AP    N   D           
Sbjct: 139 SRGFGFVTMSSKEAVEAACQQFNGYEIDGRALRVNSGPAPPKRENSFGDNSSYQGGRGGG 198

Query: 470 ------KIFVGNLPFSVDSAALAGLFEQAGDVEMVEVIYDKLTGRSRGFGFVTMSSKEEV 631
                 +++VGNL +SVD   L  LF + G V   +V+YD+ +GRSRGFGFVT SS +EV
Sbjct: 199 SMDSSNRVYVGNLAWSVDQQQLETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAKEV 258

Query: 632 EAACQQFNG 658
             A +  +G
Sbjct: 259 NDAIESLDG 267


>ref|XP_004246655.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic-like [Solanum
           lycopersicum]
          Length = 290

 Score =  169 bits (427), Expect = 9e-40
 Identities = 90/115 (78%), Positives = 96/115 (83%)
 Frame = +2

Query: 317 SSRFLRNVTLSDFDQIEEEVEGFGGDESDQGLSDDGVGGAPSYERNDSPDLKIFVGNLPF 496
           SSRF+R VTLSDFDQIEE   G   +E + GLSD+G   A   ERN +PDLKIFVGNLPF
Sbjct: 53  SSRFVRKVTLSDFDQIEEVGAGDDDEEEEGGLSDEG---ASYQERNANPDLKIFVGNLPF 109

Query: 497 SVDSAALAGLFEQAGDVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGY 661
           SVDSA LA LFE+AGDVEMVEVIYDKLTGRSRGFGFVTMSSKE VEAACQQFNGY
Sbjct: 110 SVDSAYLAELFERAGDVEMVEVIYDKLTGRSRGFGFVTMSSKEAVEAACQQFNGY 164



 Score = 70.5 bits (171), Expect = 4e-10
 Identities = 41/92 (44%), Positives = 54/92 (58%)
 Frame = +2

Query: 383 FGGDESDQGLSDDGVGGAPSYERNDSPDLKIFVGNLPFSVDSAALAGLFEQAGDVEMVEV 562
           FGG+ S QG    G GG      N     +++VGNL +SVD   L  LF + G V   +V
Sbjct: 186 FGGNSSYQG----GRGGGSMDSSN-----RVYVGNLAWSVDQQQLETLFSEQGKVVDAKV 236

Query: 563 IYDKLTGRSRGFGFVTMSSKEEVEAACQQFNG 658
           +YD+ +GRSRGFGFVT SS +EV  A +  +G
Sbjct: 237 VYDRDSGRSRGFGFVTYSSAQEVNDAIESLDG 268


>sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A, chloroplastic; AltName:
           Full=CP29A; Flags: Precursor gi|19754|emb|CAA43427.1|
           29kD A ribonucleoprotein [Nicotiana sylvestris]
          Length = 273

 Score =  163 bits (413), Expect = 4e-38
 Identities = 89/118 (75%), Positives = 94/118 (79%)
 Frame = +2

Query: 308 SCISSRFLRNVTLSDFDQIEEEVEGFGGDESDQGLSDDGVGGAPSYERNDSPDLKIFVGN 487
           SC SSRF+R VTLSDFDQIE+  +G           DDGV      ERN SPDLKIFVGN
Sbjct: 49  SCFSSRFVRKVTLSDFDQIEDVEDG-----------DDGV----EEERNFSPDLKIFVGN 93

Query: 488 LPFSVDSAALAGLFEQAGDVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGY 661
           LPFS DSAALA LFE+AG+VEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGY
Sbjct: 94  LPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGY 151



 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 46/125 (36%), Positives = 62/125 (49%), Gaps = 12/125 (9%)
 Frame = +2

Query: 320 SRFLRNVTLSDFDQIEEEVEGFGGDESDQGLSDDGVGGAPSYERNDS------------P 463
           SR    VT+S  +++E   + F G E D        G  P    N S             
Sbjct: 127 SRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFRGGSRGGGSFDS 186

Query: 464 DLKIFVGNLPFSVDSAALAGLFEQAGDVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAAC 643
             +++VGNL + VD  AL  LF + G V   +V+YD+ +GRSRGFGFVT SS EEV  A 
Sbjct: 187 SNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAI 246

Query: 644 QQFNG 658
           +  +G
Sbjct: 247 ESLDG 251


>sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, chloroplastic; AltName:
           Full=CP-RBP30; Flags: Precursor gi|19708|emb|CAA46234.1|
           RNA binding protein 30 [Nicotiana plumbaginifolia]
          Length = 279

 Score =  156 bits (395), Expect = 5e-36
 Identities = 85/118 (72%), Positives = 93/118 (78%)
 Frame = +2

Query: 308 SCISSRFLRNVTLSDFDQIEEEVEGFGGDESDQGLSDDGVGGAPSYERNDSPDLKIFVGN 487
           SC SSRF+R VTL DFDQIE+  +G      D+G+ +         ERN SPDLKIFVGN
Sbjct: 49  SCFSSRFVRKVTLPDFDQIEDVEDG------DEGVEE---------ERNFSPDLKIFVGN 93

Query: 488 LPFSVDSAALAGLFEQAGDVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGY 661
           L FS DSAALA LFE+AG+VEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGY
Sbjct: 94  LLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGY 151



 Score = 70.1 bits (170), Expect = 6e-10
 Identities = 46/131 (35%), Positives = 62/131 (47%), Gaps = 18/131 (13%)
 Frame = +2

Query: 320 SRFLRNVTLSDFDQIEEEVEGFGGDESDQGLSDDGVGGAPSYERNDS------------- 460
           SR    VT+S  +++E   + F G E D        G  P    N S             
Sbjct: 127 SRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFRENSSFRGGSRG 186

Query: 461 -----PDLKIFVGNLPFSVDSAALAGLFEQAGDVEMVEVIYDKLTGRSRGFGFVTMSSKE 625
                   +++VGNL + VD  AL  LF + G V   +V+YD+ +GRSRGFGFVT SS E
Sbjct: 187 GGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAE 246

Query: 626 EVEAACQQFNG 658
           EV  A +  +G
Sbjct: 247 EVNNAIESLDG 257


>ref|XP_006363666.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic-like isoform
           X2 [Solanum tuberosum]
          Length = 291

 Score =  144 bits (362), Expect = 3e-32
 Identities = 83/129 (64%), Positives = 94/129 (72%), Gaps = 3/129 (2%)
 Frame = +2

Query: 284 TPAA--RTFESC-ISSRFLRNVTLSDFDQIEEEVEGFGGDESDQGLSDDGVGGAPSYERN 454
           TP++  + FES    SRF+RNV LS+FDQ+E++V                  G    E N
Sbjct: 48  TPSSSIKPFESSSFGSRFVRNVALSEFDQLEDDV------------------GEVEEEPN 89

Query: 455 DSPDLKIFVGNLPFSVDSAALAGLFEQAGDVEMVEVIYDKLTGRSRGFGFVTMSSKEEVE 634
            SPDLK+FVGNLPFSVDSAALA LFE+AG+VEMVEVIYDKLTGRSRGFGFVTMSSK EVE
Sbjct: 90  FSPDLKLFVGNLPFSVDSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKAEVE 149

Query: 635 AACQQFNGY 661
           AA QQFNGY
Sbjct: 150 AAEQQFNGY 158



 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 40/99 (40%), Positives = 54/99 (54%)
 Frame = +2

Query: 365 EEEVEGFGGDESDQGLSDDGVGGAPSYERNDSPDLKIFVGNLPFSVDSAALAGLFEQAGD 544
           E+    FGG     G S++   G     RN     +++VGNL + VD  +L  LF   G 
Sbjct: 174 EKRENSFGGGRG--GRSENSSYGGARGGRNFDSSNRVYVGNLSWGVDDLSLRELFSDQGK 231

Query: 545 VEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGY 661
           V   +V+YD+ +GRSRGFGFVT SS +EV  A    NG+
Sbjct: 232 VVDCKVVYDRDSGRSRGFGFVTFSSAQEVNKAIDSLNGF 270


>ref|XP_006363665.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic-like isoform
           X1 [Solanum tuberosum]
          Length = 301

 Score =  144 bits (362), Expect = 3e-32
 Identities = 83/129 (64%), Positives = 94/129 (72%), Gaps = 3/129 (2%)
 Frame = +2

Query: 284 TPAA--RTFESC-ISSRFLRNVTLSDFDQIEEEVEGFGGDESDQGLSDDGVGGAPSYERN 454
           TP++  + FES    SRF+RNV LS+FDQ+E++V                  G    E N
Sbjct: 48  TPSSSIKPFESSSFGSRFVRNVALSEFDQLEDDV------------------GEVEEEPN 89

Query: 455 DSPDLKIFVGNLPFSVDSAALAGLFEQAGDVEMVEVIYDKLTGRSRGFGFVTMSSKEEVE 634
            SPDLK+FVGNLPFSVDSAALA LFE+AG+VEMVEVIYDKLTGRSRGFGFVTMSSK EVE
Sbjct: 90  FSPDLKLFVGNLPFSVDSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKAEVE 149

Query: 635 AACQQFNGY 661
           AA QQFNGY
Sbjct: 150 AAEQQFNGY 158



 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 39/97 (40%), Positives = 52/97 (53%)
 Frame = +2

Query: 371 EVEGFGGDESDQGLSDDGVGGAPSYERNDSPDLKIFVGNLPFSVDSAALAGLFEQAGDVE 550
           E   +GG  S+        GG     RN     +++VGNL + VD  +L  LF   G V 
Sbjct: 189 ENSSYGGGRSENSSYGGARGG-----RNFDSSNRVYVGNLSWGVDDLSLRELFSDQGKVV 243

Query: 551 MVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGY 661
             +V+YD+ +GRSRGFGFVT SS +EV  A    NG+
Sbjct: 244 DCKVVYDRDSGRSRGFGFVTFSSAQEVNKAIDSLNGF 280


>ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic isoform 1 [Vitis
           vinifera]
          Length = 288

 Score =  138 bits (347), Expect = 2e-30
 Identities = 79/126 (62%), Positives = 96/126 (76%)
 Frame = +2

Query: 284 TPAARTFESCISSRFLRNVTLSDFDQIEEEVEGFGGDESDQGLSDDGVGGAPSYERNDSP 463
           +P++R F + +SSRF+RNV +S   + +E+V           LSD+G    PS+    SP
Sbjct: 48  SPSSRGFLT-LSSRFVRNVAVSSDYEQDEDV-----------LSDEG---EPSF----SP 88

Query: 464 DLKIFVGNLPFSVDSAALAGLFEQAGDVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAAC 643
           DLK+FVGNLPF+VDSA LAGLFEQAG+VEMVEVIYDK+TGRSRGFGFVTMS+ EEVEAA 
Sbjct: 89  DLKLFVGNLPFNVDSAGLAGLFEQAGNVEMVEVIYDKITGRSRGFGFVTMSTVEEVEAAA 148

Query: 644 QQFNGY 661
           QQFNGY
Sbjct: 149 QQFNGY 154



 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 34/63 (53%), Positives = 42/63 (66%)
 Frame = +2

Query: 470 KIFVGNLPFSVDSAALAGLFEQAGDVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 649
           +I+VGNL + VD  AL  LF + G V    VIYD+ TGRSRGFGFVT +S EEV  A + 
Sbjct: 205 RIYVGNLSWGVDDLALETLFSEQGKVTEARVIYDRETGRSRGFGFVTYNSAEEVNRAIES 264

Query: 650 FNG 658
            +G
Sbjct: 265 LDG 267


>sp|Q08937.1|ROC2_NICSY RecName: Full=29 kDa ribonucleoprotein B, chloroplastic; AltName:
           Full=CP29B; Flags: Precursor gi|14135|emb|CAA43428.1|
           29kD B ribonucleoprotein [Nicotiana sylvestris]
          Length = 291

 Score =  134 bits (337), Expect = 2e-29
 Identities = 78/122 (63%), Positives = 88/122 (72%)
 Frame = +2

Query: 296 RTFESCISSRFLRNVTLSDFDQIEEEVEGFGGDESDQGLSDDGVGGAPSYERNDSPDLKI 475
           + FES  S+R    V LS FDQ+E++VE               V   P +    S DLK+
Sbjct: 53  KPFESSFSTR----VALSGFDQLEDDVE---------------VAEQPRF----SEDLKL 89

Query: 476 FVGNLPFSVDSAALAGLFEQAGDVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFN 655
           FVGNLPFSVDSAALAGLFE+AG+VEMVEVIYDKLTGRSRGFGFVTMS+KEEVEAA QQFN
Sbjct: 90  FVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKEEVEAAEQQFN 149

Query: 656 GY 661
           GY
Sbjct: 150 GY 151



 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 43/95 (45%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
 Frame = +2

Query: 380 GFGGDESDQGLSD--DGVGGAPSYERNDSPDLKIFVGNLPFSVDSAALAGLFEQAGDVEM 553
           G GG+ S  G  D     GGA      DS + +++VGNL + VD  AL  LF + G+V  
Sbjct: 177 GRGGNSSYGGGRDGNSSFGGARGGRSVDSSN-RVYVGNLSWGVDDLALKELFSEQGNVVD 235

Query: 554 VEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNG 658
            +V+YD+ +GRSRGFGFVT SS +EV  A    NG
Sbjct: 236 AKVVYDRDSGRSRGFGFVTYSSSKEVNDAIDSLNG 270


>sp|P49314.1|ROC2_NICPL RecName: Full=31 kDa ribonucleoprotein, chloroplastic; AltName:
           Full=CP-RBP31; Flags: Precursor gi|19710|emb|CAA46233.1|
           RNA binding protein 31 [Nicotiana plumbaginifolia]
          Length = 292

 Score =  134 bits (336), Expect = 3e-29
 Identities = 77/122 (63%), Positives = 89/122 (72%)
 Frame = +2

Query: 296 RTFESCISSRFLRNVTLSDFDQIEEEVEGFGGDESDQGLSDDGVGGAPSYERNDSPDLKI 475
           + FES  S+R    V LSDFDQ+E++VE               V   P +    S DLK+
Sbjct: 54  KPFESSFSTR----VALSDFDQLEDDVE---------------VAEQPRF----SEDLKL 90

Query: 476 FVGNLPFSVDSAALAGLFEQAGDVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFN 655
           FVGNLPFSVDSAALAGLFE+AG+VE+VEVIYDKL+GRSRGFGFVTMS+KEEVEAA QQFN
Sbjct: 91  FVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKEEVEAAEQQFN 150

Query: 656 GY 661
           GY
Sbjct: 151 GY 152



 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 43/95 (45%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
 Frame = +2

Query: 380 GFGGDESDQGLSD--DGVGGAPSYERNDSPDLKIFVGNLPFSVDSAALAGLFEQAGDVEM 553
           G GG+ S  G  D     GGA      DS + +++VGNL + VD  AL  LF + G+V  
Sbjct: 178 GRGGNSSYGGGRDGNSSFGGARGGRSVDSSN-RVYVGNLSWGVDDLALKELFSEQGNVVD 236

Query: 554 VEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNG 658
            +V+YD+ +GRSRGFGFVT SS +EV  A    NG
Sbjct: 237 AKVVYDRDSGRSRGFGFVTYSSAKEVNDAIDSLNG 271


>ref|XP_006428771.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
           gi|568855826|ref|XP_006481497.1| PREDICTED:
           ribonucleoprotein At2g37220, chloroplastic-like [Citrus
           sinensis] gi|557530828|gb|ESR42011.1| hypothetical
           protein CICLE_v10012331mg [Citrus clementina]
          Length = 282

 Score =  131 bits (329), Expect = 2e-28
 Identities = 76/115 (66%), Positives = 83/115 (72%), Gaps = 1/115 (0%)
 Frame = +2

Query: 320 SRFLRNVTLS-DFDQIEEEVEGFGGDESDQGLSDDGVGGAPSYERNDSPDLKIFVGNLPF 496
           SRF+RNV +S +FDQ           E D    +DG         N SPDLK+FVGNLPF
Sbjct: 63  SRFVRNVAVSSEFDQ-----------EEDLLSDEDG--------SNFSPDLKLFVGNLPF 103

Query: 497 SVDSAALAGLFEQAGDVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGY 661
           SVDSA LAGLFE AG+VEMVEVIYDK+TGRSRGFGFVTMSS EEVEAA QQFNGY
Sbjct: 104 SVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGY 158



 Score = 72.8 bits (177), Expect = 9e-11
 Identities = 50/133 (37%), Positives = 66/133 (49%), Gaps = 20/133 (15%)
 Frame = +2

Query: 320 SRFLRNVTLSDFDQIEEEVEGFGGDE--------------------SDQGLSDDGVGGAP 439
           SR    VT+S  +++E   + F G E                    S +G    G G AP
Sbjct: 134 SRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNSGPPPPRREEFSPRGPRGGGAG-AP 192

Query: 440 SYERNDSPDLKIFVGNLPFSVDSAALAGLFEQAGDVEMVEVIYDKLTGRSRGFGFVTMSS 619
           S   N     +++VGNL + VD  AL  LF + G V   +V+YD+ +GRSRGFGFVT SS
Sbjct: 193 SSGGN-----RVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSS 247

Query: 620 KEEVEAACQQFNG 658
            EEV+ A    NG
Sbjct: 248 AEEVDNAIDSLNG 260


>ref|XP_006428770.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
           gi|557530827|gb|ESR42010.1| hypothetical protein
           CICLE_v10012331mg [Citrus clementina]
          Length = 266

 Score =  131 bits (329), Expect = 2e-28
 Identities = 76/115 (66%), Positives = 83/115 (72%), Gaps = 1/115 (0%)
 Frame = +2

Query: 320 SRFLRNVTLS-DFDQIEEEVEGFGGDESDQGLSDDGVGGAPSYERNDSPDLKIFVGNLPF 496
           SRF+RNV +S +FDQ           E D    +DG         N SPDLK+FVGNLPF
Sbjct: 63  SRFVRNVAVSSEFDQ-----------EEDLLSDEDG--------SNFSPDLKLFVGNLPF 103

Query: 497 SVDSAALAGLFEQAGDVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGY 661
           SVDSA LAGLFE AG+VEMVEVIYDK+TGRSRGFGFVTMSS EEVEAA QQFNGY
Sbjct: 104 SVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGY 158



 Score = 72.8 bits (177), Expect = 9e-11
 Identities = 50/133 (37%), Positives = 66/133 (49%), Gaps = 20/133 (15%)
 Frame = +2

Query: 320 SRFLRNVTLSDFDQIEEEVEGFGGDE--------------------SDQGLSDDGVGGAP 439
           SR    VT+S  +++E   + F G E                    S +G    G G AP
Sbjct: 134 SRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNSGPPPPRREEFSPRGPRGGGAG-AP 192

Query: 440 SYERNDSPDLKIFVGNLPFSVDSAALAGLFEQAGDVEMVEVIYDKLTGRSRGFGFVTMSS 619
           S   N     +++VGNL + VD  AL  LF + G V   +V+YD+ +GRSRGFGFVT SS
Sbjct: 193 SSGGN-----RVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSS 247

Query: 620 KEEVEAACQQFNG 658
            EEV+ A    NG
Sbjct: 248 AEEVDNAIDSLNG 260


>ref|XP_006428769.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
           gi|557530826|gb|ESR42009.1| hypothetical protein
           CICLE_v10012331mg [Citrus clementina]
          Length = 263

 Score =  131 bits (329), Expect = 2e-28
 Identities = 76/115 (66%), Positives = 83/115 (72%), Gaps = 1/115 (0%)
 Frame = +2

Query: 320 SRFLRNVTLS-DFDQIEEEVEGFGGDESDQGLSDDGVGGAPSYERNDSPDLKIFVGNLPF 496
           SRF+RNV +S +FDQ           E D    +DG         N SPDLK+FVGNLPF
Sbjct: 63  SRFVRNVAVSSEFDQ-----------EEDLLSDEDG--------SNFSPDLKLFVGNLPF 103

Query: 497 SVDSAALAGLFEQAGDVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGY 661
           SVDSA LAGLFE AG+VEMVEVIYDK+TGRSRGFGFVTMSS EEVEAA QQFNGY
Sbjct: 104 SVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGY 158



 Score = 73.9 bits (180), Expect = 4e-11
 Identities = 50/134 (37%), Positives = 67/134 (50%), Gaps = 20/134 (14%)
 Frame = +2

Query: 320 SRFLRNVTLSDFDQIEEEVEGFGGDE--------------------SDQGLSDDGVGGAP 439
           SR    VT+S  +++E   + F G E                    S +G    G G AP
Sbjct: 134 SRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNSGPPPPRREEFSPRGPRGGGAG-AP 192

Query: 440 SYERNDSPDLKIFVGNLPFSVDSAALAGLFEQAGDVEMVEVIYDKLTGRSRGFGFVTMSS 619
           S   N     +++VGNL + VD  AL  LF + G V   +V+YD+ +GRSRGFGFVT SS
Sbjct: 193 SSGGN-----RVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSS 247

Query: 620 KEEVEAACQQFNGY 661
            EEV+ A    NG+
Sbjct: 248 AEEVDNAIDSLNGF 261


>ref|XP_006428768.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
           gi|557530825|gb|ESR42008.1| hypothetical protein
           CICLE_v10012331mg [Citrus clementina]
          Length = 271

 Score =  131 bits (329), Expect = 2e-28
 Identities = 76/115 (66%), Positives = 83/115 (72%), Gaps = 1/115 (0%)
 Frame = +2

Query: 320 SRFLRNVTLS-DFDQIEEEVEGFGGDESDQGLSDDGVGGAPSYERNDSPDLKIFVGNLPF 496
           SRF+RNV +S +FDQ           E D    +DG         N SPDLK+FVGNLPF
Sbjct: 63  SRFVRNVAVSSEFDQ-----------EEDLLSDEDG--------SNFSPDLKLFVGNLPF 103

Query: 497 SVDSAALAGLFEQAGDVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGY 661
           SVDSA LAGLFE AG+VEMVEVIYDK+TGRSRGFGFVTMSS EEVEAA QQFNGY
Sbjct: 104 SVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGY 158



 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 46/123 (37%), Positives = 61/123 (49%), Gaps = 20/123 (16%)
 Frame = +2

Query: 320 SRFLRNVTLSDFDQIEEEVEGFGGDE--------------------SDQGLSDDGVGGAP 439
           SR    VT+S  +++E   + F G E                    S +G    G G AP
Sbjct: 134 SRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNSGPPPPRREEFSPRGPRGGGAG-AP 192

Query: 440 SYERNDSPDLKIFVGNLPFSVDSAALAGLFEQAGDVEMVEVIYDKLTGRSRGFGFVTMSS 619
           S   N     +++VGNL + VD  AL  LF + G V   +V+YD+ +GRSRGFGFVT SS
Sbjct: 193 SSGGN-----RVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSS 247

Query: 620 KEE 628
            EE
Sbjct: 248 AEE 250


>ref|XP_006428767.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
           gi|557530824|gb|ESR42007.1| hypothetical protein
           CICLE_v10012331mg [Citrus clementina]
          Length = 297

 Score =  131 bits (329), Expect = 2e-28
 Identities = 76/115 (66%), Positives = 83/115 (72%), Gaps = 1/115 (0%)
 Frame = +2

Query: 320 SRFLRNVTLS-DFDQIEEEVEGFGGDESDQGLSDDGVGGAPSYERNDSPDLKIFVGNLPF 496
           SRF+RNV +S +FDQ           E D    +DG         N SPDLK+FVGNLPF
Sbjct: 63  SRFVRNVAVSSEFDQ-----------EEDLLSDEDG--------SNFSPDLKLFVGNLPF 103

Query: 497 SVDSAALAGLFEQAGDVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGY 661
           SVDSA LAGLFE AG+VEMVEVIYDK+TGRSRGFGFVTMSS EEVEAA QQFNGY
Sbjct: 104 SVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGY 158



 Score = 72.8 bits (177), Expect = 9e-11
 Identities = 50/133 (37%), Positives = 66/133 (49%), Gaps = 20/133 (15%)
 Frame = +2

Query: 320 SRFLRNVTLSDFDQIEEEVEGFGGDE--------------------SDQGLSDDGVGGAP 439
           SR    VT+S  +++E   + F G E                    S +G    G G AP
Sbjct: 134 SRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNSGPPPPRREEFSPRGPRGGGAG-AP 192

Query: 440 SYERNDSPDLKIFVGNLPFSVDSAALAGLFEQAGDVEMVEVIYDKLTGRSRGFGFVTMSS 619
           S   N     +++VGNL + VD  AL  LF + G V   +V+YD+ +GRSRGFGFVT SS
Sbjct: 193 SSGGN-----RVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSS 247

Query: 620 KEEVEAACQQFNG 658
            EEV+ A    NG
Sbjct: 248 AEEVDNAIDSLNG 260


>gb|AAA79045.1| 24 kDa RNA binding protein, partial [Spinacia oleracea]
          Length = 220

 Score =  131 bits (329), Expect = 2e-28
 Identities = 75/116 (64%), Positives = 83/116 (71%)
 Frame = +2

Query: 314 ISSRFLRNVTLSDFDQIEEEVEGFGGDESDQGLSDDGVGGAPSYERNDSPDLKIFVGNLP 493
           ISS F+R+V +S   + EE+V G           DD  G  P++    SPDLKIFVGNLP
Sbjct: 2   ISSSFVRHVRISSEFEQEEDVMG-----------DDDAGRQPNF----SPDLKIFVGNLP 46

Query: 494 FSVDSAALAGLFEQAGDVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGY 661
           F+VDSA LAGLF  AG VEMVEVIYDKLTGRSRGFGFVTMSS EEVEAA QQFN Y
Sbjct: 47  FNVDSAELAGLFGAAGTVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEAAAQQFNNY 102



 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 44/121 (36%), Positives = 60/121 (49%), Gaps = 8/121 (6%)
 Frame = +2

Query: 320 SRFLRNVTLSDFDQIEEEVEGFGGDESD--------QGLSDDGVGGAPSYERNDSPDLKI 475
           SR    VT+S  +++E   + F   E D            D  +    S   +     ++
Sbjct: 78  SRGFGFVTMSSVEEVEAAAQQFNNYELDGRTLRVTEDSHKDMTLPRVESECDSFGSSNRV 137

Query: 476 FVGNLPFSVDSAALAGLFEQAGDVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFN 655
            VGNL + VD  AL  LF + GDV   +VIYD+ TGRSRGFGFVT +S  EV  A +  +
Sbjct: 138 HVGNLSWKVDDDALKTLFSETGDVVEAKVIYDRDTGRSRGFGFVTYNSANEVNTAIESLD 197

Query: 656 G 658
           G
Sbjct: 198 G 198


>ref|XP_006294745.1| hypothetical protein CARUB_v10023790mg [Capsella rubella]
           gi|482563453|gb|EOA27643.1| hypothetical protein
           CARUB_v10023790mg [Capsella rubella]
          Length = 284

 Score =  129 bits (324), Expect = 8e-28
 Identities = 73/115 (63%), Positives = 85/115 (73%)
 Frame = +2

Query: 317 SSRFLRNVTLSDFDQIEEEVEGFGGDESDQGLSDDGVGGAPSYERNDSPDLKIFVGNLPF 496
           +SRF+RNV  S+F+ +EE+           G SDD    A   E++ S DLK+FVGNLPF
Sbjct: 56  ASRFVRNVATSEFE-VEED-----------GFSDD----AAPQEQSFSADLKLFVGNLPF 99

Query: 497 SVDSAALAGLFEQAGDVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGY 661
           +VDSA LA LFE AG+VEMVEVIYDK+TGRSRGFGFVTMSS  EVEAA QQFNGY
Sbjct: 100 NVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSSASEVEAAAQQFNGY 154



 Score = 66.6 bits (161), Expect = 6e-09
 Identities = 46/134 (34%), Positives = 62/134 (46%), Gaps = 21/134 (15%)
 Frame = +2

Query: 320 SRFLRNVTLSDFDQIEEEVEGFGGDESDQGLSDDGVGGAPSYERNDS------------- 460
           SR    VT+S   ++E   + F G E D G       G P  +R D              
Sbjct: 130 SRGFGFVTMSSASEVEAAAQQFNGYELD-GRPLRVNAGPPPPKREDGFSRGPRSSFGGSG 188

Query: 461 --------PDLKIFVGNLPFSVDSAALAGLFEQAGDVEMVEVIYDKLTGRSRGFGFVTMS 616
                      +++VGNL + VD  AL  LF + G V    VIYD+ +GRS+GFGFVT +
Sbjct: 189 YGGGSGAGSGNRVYVGNLSWGVDDMALESLFAEQGKVVEARVIYDRDSGRSKGFGFVTYN 248

Query: 617 SKEEVEAACQQFNG 658
           S +EV+ A    NG
Sbjct: 249 SSQEVQNAINSLNG 262


>ref|XP_006291486.1| hypothetical protein CARUB_v10017634mg [Capsella rubella]
           gi|482560193|gb|EOA24384.1| hypothetical protein
           CARUB_v10017634mg [Capsella rubella]
          Length = 327

 Score =  128 bits (322), Expect = 1e-27
 Identities = 71/115 (61%), Positives = 83/115 (72%)
 Frame = +2

Query: 317 SSRFLRNVTLSDFDQIEEEVEGFGGDESDQGLSDDGVGGAPSYERNDSPDLKIFVGNLPF 496
           SSRF+RNV +S   ++EE+     GD+S           AP    + SPDLK+FVGNL F
Sbjct: 54  SSRFVRNVAVSSDFEVEEDDMFADGDDS-----------APVERTSFSPDLKLFVGNLSF 102

Query: 497 SVDSAALAGLFEQAGDVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGY 661
           +VDSA LA LFE AG+VEMVEVIYDK+TGRSRGFGFVTMS+  EVEAA QQFNGY
Sbjct: 103 NVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQFNGY 157



 Score = 70.5 bits (171), Expect = 4e-10
 Identities = 40/94 (42%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
 Frame = +2

Query: 380 GFGGDESDQGLSDDGVG-GAPSYERNDSPDLKIFVGNLPFSVDSAALAGLFEQAGDVEMV 556
           G+GG +     S  G G G+ S  R       ++VGNL + VD  AL  +F + G V   
Sbjct: 219 GYGGSQRSSYGSGSGSGSGSGSGNR-------LYVGNLSWGVDDMALENMFNEQGKVVEA 271

Query: 557 EVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNG 658
            VIYD+ +GRS+GFGFVT+SS +EV+ A    NG
Sbjct: 272 RVIYDRDSGRSKGFGFVTLSSSQEVQKAINSLNG 305


>ref|XP_004304439.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic-like [Fragaria
           vesca subsp. vesca]
          Length = 277

 Score =  128 bits (321), Expect = 2e-27
 Identities = 72/115 (62%), Positives = 83/115 (72%)
 Frame = +2

Query: 317 SSRFLRNVTLSDFDQIEEEVEGFGGDESDQGLSDDGVGGAPSYERNDSPDLKIFVGNLPF 496
           S  F+R+V +SDF+Q EE + G   DE+               E N SPDLK+FVGNLPF
Sbjct: 55  SRSFVRHVAVSDFEQDEEVLSG---DEA---------------EPNFSPDLKLFVGNLPF 96

Query: 497 SVDSAALAGLFEQAGDVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGY 661
           +VDSA LA LFE AG+VEMVEVIYDK TGRSRGFGFVTMSS +EVEAA +QFNGY
Sbjct: 97  TVDSAQLAELFEGAGNVEMVEVIYDKTTGRSRGFGFVTMSSAQEVEAAARQFNGY 151



 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 44/129 (34%), Positives = 62/129 (48%), Gaps = 16/129 (12%)
 Frame = +2

Query: 320 SRFLRNVTLSDFDQIEEEVEGFGGDESDQGLSDDGVGGAPSYE-------RNDSP----- 463
           SR    VT+S   ++E     F G E D        G  P          R  SP     
Sbjct: 127 SRGFGFVTMSSAQEVEAAARQFNGYELDGRALRVNYGPPPPRTEDSFRGARGGSPRGGGG 186

Query: 464 ----DLKIFVGNLPFSVDSAALAGLFEQAGDVEMVEVIYDKLTGRSRGFGFVTMSSKEEV 631
                 +++VGNL + VD+ AL  LF + G V   +V++D+ +GRSRGFGFVT  S EE+
Sbjct: 187 YGDSSNRLYVGNLAWGVDNLALENLFNEQGKVLEAKVVFDRDSGRSRGFGFVTYGSAEEM 246

Query: 632 EAACQQFNG 658
            +A +  +G
Sbjct: 247 NSAIESLDG 255


>gb|EMJ06843.1| hypothetical protein PRUPE_ppa009295mg [Prunus persica]
          Length = 298

 Score =  127 bits (320), Expect = 2e-27
 Identities = 72/115 (62%), Positives = 82/115 (71%)
 Frame = +2

Query: 317 SSRFLRNVTLSDFDQIEEEVEGFGGDESDQGLSDDGVGGAPSYERNDSPDLKIFVGNLPF 496
           SSRF+RNV +S   + +EEV           LSDDG       E + +PDLK+FVGNLPF
Sbjct: 83  SSRFVRNVAVSSEFEQDEEV-----------LSDDG-------EASFAPDLKLFVGNLPF 124

Query: 497 SVDSAALAGLFEQAGDVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGY 661
           SVDSA LAGLFE AG+VEMVEVIYDK TGRSRGFGFVTMSS +E E A +Q NGY
Sbjct: 125 SVDSAQLAGLFESAGNVEMVEVIYDKTTGRSRGFGFVTMSSVQEAEGAARQLNGY 179



 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 43/124 (34%), Positives = 64/124 (51%), Gaps = 11/124 (8%)
 Frame = +2

Query: 320 SRFLRNVTLSDFDQIEEEVEGFGGDESDQGL-----------SDDGVGGAPSYERNDSPD 466
           SR    VT+S   + E       G E D              S+D   GA     +DS +
Sbjct: 155 SRGFGFVTMSSVQEAEGAARQLNGYELDGRALRVNYGPPPPRSEDSFRGARGGGGSDSSN 214

Query: 467 LKIFVGNLPFSVDSAALAGLFEQAGDVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQ 646
            +++VGNL + VD+ AL  LF + G V   +V+YD+ +GRSRGFGFVT  + +E+ +A +
Sbjct: 215 -RLYVGNLAWGVDNLALENLFSEQGKVLEAKVVYDRDSGRSRGFGFVTYGTADEMNSAME 273

Query: 647 QFNG 658
             +G
Sbjct: 274 SLDG 277


>gb|EXC16209.1| 29 kDa ribonucleoprotein B [Morus notabilis]
          Length = 296

 Score =  127 bits (319), Expect = 3e-27
 Identities = 70/117 (59%), Positives = 84/117 (71%)
 Frame = +2

Query: 311 CISSRFLRNVTLSDFDQIEEEVEGFGGDESDQGLSDDGVGGAPSYERNDSPDLKIFVGNL 490
           C+S+R  R ++ S   +   +V      + D+ +  DG G  P +    SPDLK+FVGNL
Sbjct: 55  CVSARGFRGLSSSSPCRFVPKVAVSSEFDQDEDVLSDG-GEEPGF----SPDLKLFVGNL 109

Query: 491 PFSVDSAALAGLFEQAGDVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGY 661
           PFSVDSA LAGLFE+ G+VEMVEVIYDK TGRSRGFGFVTMSS +EVEAA QQFNGY
Sbjct: 110 PFSVDSAQLAGLFERTGNVEMVEVIYDKTTGRSRGFGFVTMSSIDEVEAAAQQFNGY 166



 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 47/138 (34%), Positives = 67/138 (48%), Gaps = 25/138 (18%)
 Frame = +2

Query: 320 SRFLRNVTLSDFDQIEEEVEGFGGDESDQ-------------------------GLSDDG 424
           SR    VT+S  D++E   + F G E +                          G    G
Sbjct: 142 SRGFGFVTMSSIDEVEAAAQQFNGYELEGRPLRVNYGPPPSREDDSFPRGRRGGGGGGGG 201

Query: 425 VGGAPSYERNDSPDLKIFVGNLPFSVDSAALAGLFEQAGDVEMVEVIYDKLTGRSRGFGF 604
            GG   YE  +    +++VGNL + VD+AAL  LF + G V   +V+YD+ +GRSRGFGF
Sbjct: 202 GGGGAGYETGN----RVYVGNLSWGVDNAALESLFSEQGKVLEAKVVYDRDSGRSRGFGF 257

Query: 605 VTMSSKEEVEAACQQFNG 658
           VT ++ +EV +A    NG
Sbjct: 258 VTYNTADEVNSAINSLNG 275