BLASTX nr result

ID: Atropa21_contig00002039 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00002039
         (955 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004230309.1| PREDICTED: ATP-dependent Clp protease proteo...    83   2e-13
ref|XP_006344766.1| PREDICTED: ATP-dependent Clp protease proteo...    78   6e-12

>ref|XP_004230309.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 5,
           chloroplastic [Solanum lycopersicum]
           gi|15485610|emb|CAC67407.1| Clp protease 2 proteolytic
           subunit [Solanum lycopersicum]
          Length = 299

 Score = 82.8 bits (203), Expect = 2e-13
 Identities = 49/82 (59%), Positives = 58/82 (70%), Gaps = 4/82 (4%)
 Frame = +1

Query: 124 MAHS--SXTSSISKLNCPIFPSDSCTLSQAHPVSLPFKPLSFRKLKSVGKVKNRVNTTVK 297
           MAHS  + TSS+SK N  IFPSD C +S   P+SL FK LS RK+K+VGKVK+R N+TVK
Sbjct: 1   MAHSCIATTSSLSKYNSAIFPSDYCNIS---PISLQFKRLSLRKVKAVGKVKSRGNSTVK 57

Query: 298 AVYSGAADWD--SGTSRSEIWS 357
           AVYSG  DWD    +  S IWS
Sbjct: 58  AVYSG-GDWDLAKASRSSGIWS 78


>ref|XP_006344766.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 5,
           chloroplastic-like [Solanum tuberosum]
          Length = 295

 Score = 77.8 bits (190), Expect = 6e-12
 Identities = 50/82 (60%), Positives = 55/82 (67%), Gaps = 4/82 (4%)
 Frame = +1

Query: 124 MAHS--SXTSSISKLNCPIFPSDSCTLSQAHPVSLPFKPLSFRKLKSVGKVKNRVNTTVK 297
           MAHS  + TSS+SK N  IFPSDSC LS   P+SL FK LS R     GKVKNR N+TVK
Sbjct: 1   MAHSCIATTSSLSKFNSSIFPSDSCNLS---PISLQFKRLSLRN----GKVKNRGNSTVK 53

Query: 298 AVYSGAADWD--SGTSRSEIWS 357
           AVYSG ADWD    +  S IWS
Sbjct: 54  AVYSG-ADWDLAKASRSSGIWS 74