BLASTX nr result

ID: Atropa21_contig00001379 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00001379
         (1698 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605...    77   4e-27
ref|XP_006338209.1| PREDICTED: putative ribonuclease H protein A...    78   2e-25
ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein A...    83   4e-25
ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein A...    69   3e-24
ref|XP_006343440.1| PREDICTED: uncharacterized protein LOC102595...    65   7e-23
ref|XP_006355175.1| PREDICTED: putative ribonuclease H protein A...    66   6e-20
ref|XP_006338863.1| PREDICTED: uncharacterized protein LOC102579...    52   1e-12
ref|XP_006344597.1| PREDICTED: uncharacterized protein LOC102605...    55   1e-08
ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596...    57   3e-08
ref|XP_006351095.1| PREDICTED: polygalacturonase-like [Solanum t...    43   1e-06

>ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605437 [Solanum tuberosum]
          Length = 333

 Score = 77.0 bits (188), Expect(3) = 4e-27
 Identities = 37/96 (38%), Positives = 60/96 (62%), Gaps = 1/96 (1%)
 Frame = +3

Query: 1041 LETDSLDLLNILHGLWTIPWELRDIVEDIKEDMRSVQDHIMHTFREGNKFADFHAN*ELD 1220
            LETDS  L+ IL  +W +PW +  I+EDI    +     I H +REGN  AD+ AN    
Sbjct: 233  LETDSQVLIKILTRIWEVPWSIVVIIEDIWGLFQECHVQIQHVYREGNTLADYLANLAFF 292

Query: 1221 NVDMEIAN-FINMPTEGRRIINMNKSQIPHTRIKTR 1325
            N ++ + N F  +P++ ++I+N++K Q+P+ +I+TR
Sbjct: 293  NPNIIVYNSFAELPSQAKKIVNLDKQQLPNIKIRTR 328



 Score = 66.2 bits (160), Expect(3) = 4e-27
 Identities = 31/57 (54%), Positives = 41/57 (71%)
 Frame = +1

Query: 853  LKCNPNGASRDNPRSSSYGYCIRDSICDLVYAQDKDIEINTNTEEESKAIRQALKYC 1023
            L CN + ASR NP  SSYG+C+R+S+ DLVY Q K+I+  TN E E+ AIR+ L +C
Sbjct: 167  LTCNTDVASRCNPEISSYGFCLRNSVGDLVYVQGKEIQEGTNLEVEAVAIREDLAHC 223



 Score = 27.3 bits (59), Expect(3) = 4e-27
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 786 LSSYRPKLYYAKVLWRMPQ 842
           L  ++PKLYY  V W+ P+
Sbjct: 146 LEKHKPKLYYLPVCWKPPE 164


>ref|XP_006338209.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            tuberosum]
          Length = 198

 Score = 78.2 bits (191), Expect(2) = 2e-25
 Identities = 35/100 (35%), Positives = 67/100 (67%), Gaps = 1/100 (1%)
 Frame = +3

Query: 1032 QIQLETDSLDLLNILHGLWTIPWELRDIVEDIKEDMRSVQDHIMHTFREGNKFADFHAN* 1211
            +I LE+DSL ++ I++  W + W + +  +++K++M  ++    H +REGNK AD+ AN 
Sbjct: 90   KIILESDSLLMVKIINEAWKVLWVIAEEFDELKQEMTKIEVKTQHIYREGNKLADYLANL 149

Query: 1212 ELDNVDME-IANFINMPTEGRRIINMNKSQIPHTRIKTRK 1328
             +++ + +  ++F  +P+ GR+IINM K+QIP  R +T++
Sbjct: 150  AINSTEKKTFSSFQQLPSLGRKIINMEKAQIPSLRCRTKR 189



 Score = 66.2 bits (160), Expect(2) = 2e-25
 Identities = 29/61 (47%), Positives = 43/61 (70%)
 Frame = +1

Query: 853  LKCNPNGASRDNPRSSSYGYCIRDSICDLVYAQDKDIEINTNTEEESKAIRQALKYCREH 1032
            +KCN +GAS+ NP  S+YGYC+R+S  DL++   ++I I TN E E +AI +A++YC   
Sbjct: 27   IKCNTDGASKGNPGISAYGYCLRNSNGDLIHVTAENIGITTNVEAEMRAILEAIRYCVNK 86

Query: 1033 K 1035
            K
Sbjct: 87   K 87


>ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            tuberosum]
          Length = 885

 Score = 82.8 bits (203), Expect(2) = 4e-25
 Identities = 40/99 (40%), Positives = 65/99 (65%), Gaps = 1/99 (1%)
 Frame = +3

Query: 1032 QIQLETDSLDLLNILHGLWTIPWELRDIVEDIKEDMRSVQDHIMHTFREGNKFADFHAN* 1211
            ++ +ETDSL L  I+   W +PW++ + VE+I+E M  ++  I H FREGN  AD  AN 
Sbjct: 771  KVIIETDSLSLKKIIQQTWRVPWKIAEKVEEIREIMEKIKAKITHIFREGNSLADSLANI 830

Query: 1212 ELDN-VDMEIANFINMPTEGRRIINMNKSQIPHTRIKTR 1325
             +++  + + + F  +P + RRI+N++K+QIP  RI+TR
Sbjct: 831  AIESQAEHQYSCFQELPLKERRILNIDKAQIPTLRIRTR 869



 Score = 60.8 bits (146), Expect(2) = 4e-25
 Identities = 31/61 (50%), Positives = 39/61 (63%)
 Frame = +1

Query: 853  LKCNPNGASRDNPRSSSYGYCIRDSICDLVYAQDKDIEINTNTEEESKAIRQALKYCREH 1032
            +K N +GA R NP  SS+G+CIRD   DL+YA+ K I I TN E E+ AI  AL+ C   
Sbjct: 708  VKSNTDGACRGNPGLSSFGFCIRDDKGDLIYAKAKGIGIATNMEAETVAILTALRECSNR 767

Query: 1033 K 1035
            K
Sbjct: 768  K 768


>ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            tuberosum]
          Length = 1035

 Score = 69.3 bits (168), Expect(3) = 3e-24
 Identities = 33/90 (36%), Positives = 59/90 (65%), Gaps = 1/90 (1%)
 Frame = +3

Query: 1032 QIQLETDSLDLLNILHGLWTIPWELRDIVEDIKEDMRSVQDHIMHTFREGNKFADFHAN* 1211
            +++LETDSL L N++   W IPWEL + +E+I E M+ +   + H +RE N+ ADF AN 
Sbjct: 742  KVRLETDSLALQNMITRSWKIPWELVEKLEEIHEIMQQIDVQVCHVYREVNQLADFIANT 801

Query: 1212 ELDNVDMEI-ANFINMPTEGRRIINMNKSQ 1298
             ++    ++  +F  +P+ G++++N++K Q
Sbjct: 802  TINTEHKKVFHHFHQLPSLGKKLLNIDKHQ 831



 Score = 65.9 bits (159), Expect(3) = 3e-24
 Identities = 30/58 (51%), Positives = 41/58 (70%)
 Frame = +1

Query: 859  CNPNGASRDNPRSSSYGYCIRDSICDLVYAQDKDIEINTNTEEESKAIRQALKYCREH 1032
            CN +GAS+ NPR SSYGYCIRD   DL+YA+  +I   TN E E+  + +AL++C E+
Sbjct: 681  CNTDGASKGNPRMSSYGYCIRDKNGDLLYAEAHNIGETTNMEAEATTVWKALQFCYEN 738



 Score = 25.4 bits (54), Expect(3) = 3e-24
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 786 LSSYRPKLYYAKVLWRMP 839
           L +Y+P L+Y  V WR P
Sbjct: 657 LQNYKPPLHYKVVRWRKP 674


>ref|XP_006343440.1| PREDICTED: uncharacterized protein LOC102595406 [Solanum tuberosum]
          Length = 866

 Score = 65.1 bits (157), Expect(3) = 7e-23
 Identities = 29/61 (47%), Positives = 41/61 (67%)
 Frame = +1

Query: 841  NQTGLKCNPNGASRDNPRSSSYGYCIRDSICDLVYAQDKDIEINTNTEEESKAIRQALKY 1020
            N    KCN +GAS+ NP  SSY YC+RD   +L+YAQ ++I   TN E E+ AI++A+ +
Sbjct: 738  NSNTRKCNTDGASKGNPGKSSYAYCLRDQEGNLIYAQAEEIPETTNVEAEAVAIKEAIYH 797

Query: 1021 C 1023
            C
Sbjct: 798  C 798



 Score = 60.1 bits (144), Expect(3) = 7e-23
 Identities = 30/60 (50%), Positives = 39/60 (65%)
 Frame = +3

Query: 1029 TQIQLETDSLDLLNILHGLWTIPWELRDIVEDIKEDMRSVQDHIMHTFREGNKFADFHAN 1208
            +++ +ETDSL L NIL G W IPW +R IVED    M+    +I H +REGN  AD+ AN
Sbjct: 804  SRVTIETDSLLLKNILQGNWEIPWNIRIIVEDTLTLMQYSTVNIEHIYREGNTLADYLAN 863



 Score = 30.8 bits (68), Expect(3) = 7e-23
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = +3

Query: 786 LSSYRPKLYYAKVLWRMPQSD 848
           L +Y+P++YY K++W  P S+
Sbjct: 720 LENYKPRIYYKKIIWMPPNSN 740


>ref|XP_006355175.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            tuberosum]
          Length = 143

 Score = 65.9 bits (159), Expect(3) = 6e-20
 Identities = 29/57 (50%), Positives = 42/57 (73%)
 Frame = +1

Query: 853  LKCNPNGASRDNPRSSSYGYCIRDSICDLVYAQDKDIEINTNTEEESKAIRQALKYC 1023
            +KCN +GAS+ NP  SSYG+CIR+   +L+YA+ + I + TN + ES AI +AL+YC
Sbjct: 27   IKCNTDGASKGNPDQSSYGFCIRNHTGELLYAEVQSIGVTTNMDAESMAIWKALQYC 83



 Score = 53.5 bits (127), Expect(3) = 6e-20
 Identities = 29/54 (53%), Positives = 33/54 (61%)
 Frame = +3

Query: 1032 QIQLETDSLDLLNILHGLWTIPWELRDIVEDIKEDMRSVQDHIMHTFREGNKFA 1193
            Q+ LETDSL L NIL   W  PWEL + VEDI E M  +   I H FRE N+ A
Sbjct: 90   QVSLETDSLTLKNILVRNWKTPWELVERVEDILEIMSHMDVTIKHIFREVNQLA 143



 Score = 26.9 bits (58), Expect(3) = 6e-20
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +3

Query: 786 LSSYRPKLYYAKVLWRMPQ 842
           L SY+P LYY  V W+ P+
Sbjct: 5   LQSYKPTLYYHVVNWKPPE 23


>ref|XP_006338863.1| PREDICTED: uncharacterized protein LOC102579795 [Solanum tuberosum]
          Length = 778

 Score = 52.4 bits (124), Expect(2) = 1e-12
 Identities = 24/56 (42%), Positives = 34/56 (60%)
 Frame = +3

Query: 1041 LETDSLDLLNILHGLWTIPWELRDIVEDIKEDMRSVQDHIMHTFREGNKFADFHAN 1208
            LETDSL +  IL G+W  PW +  +++ I+   R  Q  + H FREGNK  ++ AN
Sbjct: 205  LETDSLIVSKILDGIWETPWSISLLIKKIQWLRRDGQVEVSHVFREGNKVVNYFAN 260



 Score = 49.3 bits (116), Expect(2) = 1e-12
 Identities = 21/59 (35%), Positives = 35/59 (59%)
 Frame = +1

Query: 856  KCNPNGASRDNPRSSSYGYCIRDSICDLVYAQDKDIEINTNTEEESKAIRQALKYCREH 1032
            KCN + AS+ NPR S+ G+CIR+   + +Y   +++   T+ E E  A  + L++C  H
Sbjct: 140  KCNTDCASKGNPRPSAGGFCIRNWNGEFIYTTSQELGFKTSLEAEVIAFERGLQFCMSH 198


>ref|XP_006344597.1| PREDICTED: uncharacterized protein LOC102605041 [Solanum tuberosum]
          Length = 220

 Score = 55.1 bits (131), Expect(2) = 1e-08
 Identities = 26/62 (41%), Positives = 39/62 (62%)
 Frame = +1

Query: 856  KCNPNGASRDNPRSSSYGYCIRDSICDLVYAQDKDIEINTNTEEESKAIRQALKYCREHK 1035
            KCN +GASR N   S+  +C+RDS  DLV A+   I+  TN   E+ A+++  KYC E+ 
Sbjct: 87   KCNTDGASRGNSGPSTIAFCVRDSSGDLVGAKGLRIQDTTNITAEAMALKEGRKYCLENG 146

Query: 1036 YN 1041
            ++
Sbjct: 147  FS 148



 Score = 33.1 bits (74), Expect(2) = 1e-08
 Identities = 11/22 (50%), Positives = 18/22 (81%)
 Frame = +3

Query: 1041 LETDSLDLLNILHGLWTIPWEL 1106
            +E+DSL L+N+L+G W +PW +
Sbjct: 152  MESDSLSLINMLNGDWIVPWSV 173


>ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596481 [Solanum tuberosum]
          Length = 1135

 Score = 57.0 bits (136), Expect(2) = 3e-08
 Identities = 28/75 (37%), Positives = 47/75 (62%)
 Frame = +1

Query: 805  NSIMLRCCGECHNQTGLKCNPNGASRDNPRSSSYGYCIRDSICDLVYAQDKDIEINTNTE 984
            + ++++   E   +  +KCN +GA+R N  +SS  + +RD   DL+YA+ K I I TN E
Sbjct: 1028 SEVVMQVQEEKPGRNKVKCNTDGAARGNSGASSTSFVVRDEEGDLIYARAKGIGIATNME 1087

Query: 985  EESKAIRQALKYCRE 1029
             E+ A+ +A+ YC+E
Sbjct: 1088 AEALALLEAVWYCQE 1102



 Score = 29.6 bits (65), Expect(2) = 3e-08
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +3

Query: 1041 LETDSLDLLNILHGLWTIPWEL 1106
            +ETDSL L  ++   W IPWEL
Sbjct: 1110 IETDSLVLKKMVDNQWKIPWEL 1131


>ref|XP_006351095.1| PREDICTED: polygalacturonase-like [Solanum tuberosum]
          Length = 603

 Score = 42.7 bits (99), Expect(2) = 1e-06
 Identities = 20/56 (35%), Positives = 30/56 (53%)
 Frame = +1

Query: 856  KCNPNGASRDNPRSSSYGYCIRDSICDLVYAQDKDIEINTNTEEESKAIRQALKYC 1023
            KCN  G+S+ N + SS  +C+RDS   LV+ + + IE     E E    +  L +C
Sbjct: 473  KCNTGGSSKYNSQCSSKAFCVRDSQGSLVFVEAERIEFCDALEAEVTTFKNGLNHC 528



 Score = 38.5 bits (88), Expect(2) = 1e-06
 Identities = 18/51 (35%), Positives = 28/51 (54%)
 Frame = +3

Query: 1041 LETDSLDLLNILHGLWTIPWELRDIVEDIKEDMRSVQDHIMHTFREGNKFA 1193
            +ET+SL +  IL G W IPW +   +  ++E ++     + H  REGN  A
Sbjct: 538  METNSLIIKRILDGDWEIPWNISVHIRYVQEILKEKGVVVAHILREGNTLA 588


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