BLASTX nr result
ID: Atropa21_contig00001379
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00001379
(1698 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605... 77 4e-27
ref|XP_006338209.1| PREDICTED: putative ribonuclease H protein A... 78 2e-25
ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein A... 83 4e-25
ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein A... 69 3e-24
ref|XP_006343440.1| PREDICTED: uncharacterized protein LOC102595... 65 7e-23
ref|XP_006355175.1| PREDICTED: putative ribonuclease H protein A... 66 6e-20
ref|XP_006338863.1| PREDICTED: uncharacterized protein LOC102579... 52 1e-12
ref|XP_006344597.1| PREDICTED: uncharacterized protein LOC102605... 55 1e-08
ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596... 57 3e-08
ref|XP_006351095.1| PREDICTED: polygalacturonase-like [Solanum t... 43 1e-06
>ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605437 [Solanum tuberosum]
Length = 333
Score = 77.0 bits (188), Expect(3) = 4e-27
Identities = 37/96 (38%), Positives = 60/96 (62%), Gaps = 1/96 (1%)
Frame = +3
Query: 1041 LETDSLDLLNILHGLWTIPWELRDIVEDIKEDMRSVQDHIMHTFREGNKFADFHAN*ELD 1220
LETDS L+ IL +W +PW + I+EDI + I H +REGN AD+ AN
Sbjct: 233 LETDSQVLIKILTRIWEVPWSIVVIIEDIWGLFQECHVQIQHVYREGNTLADYLANLAFF 292
Query: 1221 NVDMEIAN-FINMPTEGRRIINMNKSQIPHTRIKTR 1325
N ++ + N F +P++ ++I+N++K Q+P+ +I+TR
Sbjct: 293 NPNIIVYNSFAELPSQAKKIVNLDKQQLPNIKIRTR 328
Score = 66.2 bits (160), Expect(3) = 4e-27
Identities = 31/57 (54%), Positives = 41/57 (71%)
Frame = +1
Query: 853 LKCNPNGASRDNPRSSSYGYCIRDSICDLVYAQDKDIEINTNTEEESKAIRQALKYC 1023
L CN + ASR NP SSYG+C+R+S+ DLVY Q K+I+ TN E E+ AIR+ L +C
Sbjct: 167 LTCNTDVASRCNPEISSYGFCLRNSVGDLVYVQGKEIQEGTNLEVEAVAIREDLAHC 223
Score = 27.3 bits (59), Expect(3) = 4e-27
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 786 LSSYRPKLYYAKVLWRMPQ 842
L ++PKLYY V W+ P+
Sbjct: 146 LEKHKPKLYYLPVCWKPPE 164
>ref|XP_006338209.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 198
Score = 78.2 bits (191), Expect(2) = 2e-25
Identities = 35/100 (35%), Positives = 67/100 (67%), Gaps = 1/100 (1%)
Frame = +3
Query: 1032 QIQLETDSLDLLNILHGLWTIPWELRDIVEDIKEDMRSVQDHIMHTFREGNKFADFHAN* 1211
+I LE+DSL ++ I++ W + W + + +++K++M ++ H +REGNK AD+ AN
Sbjct: 90 KIILESDSLLMVKIINEAWKVLWVIAEEFDELKQEMTKIEVKTQHIYREGNKLADYLANL 149
Query: 1212 ELDNVDME-IANFINMPTEGRRIINMNKSQIPHTRIKTRK 1328
+++ + + ++F +P+ GR+IINM K+QIP R +T++
Sbjct: 150 AINSTEKKTFSSFQQLPSLGRKIINMEKAQIPSLRCRTKR 189
Score = 66.2 bits (160), Expect(2) = 2e-25
Identities = 29/61 (47%), Positives = 43/61 (70%)
Frame = +1
Query: 853 LKCNPNGASRDNPRSSSYGYCIRDSICDLVYAQDKDIEINTNTEEESKAIRQALKYCREH 1032
+KCN +GAS+ NP S+YGYC+R+S DL++ ++I I TN E E +AI +A++YC
Sbjct: 27 IKCNTDGASKGNPGISAYGYCLRNSNGDLIHVTAENIGITTNVEAEMRAILEAIRYCVNK 86
Query: 1033 K 1035
K
Sbjct: 87 K 87
>ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 885
Score = 82.8 bits (203), Expect(2) = 4e-25
Identities = 40/99 (40%), Positives = 65/99 (65%), Gaps = 1/99 (1%)
Frame = +3
Query: 1032 QIQLETDSLDLLNILHGLWTIPWELRDIVEDIKEDMRSVQDHIMHTFREGNKFADFHAN* 1211
++ +ETDSL L I+ W +PW++ + VE+I+E M ++ I H FREGN AD AN
Sbjct: 771 KVIIETDSLSLKKIIQQTWRVPWKIAEKVEEIREIMEKIKAKITHIFREGNSLADSLANI 830
Query: 1212 ELDN-VDMEIANFINMPTEGRRIINMNKSQIPHTRIKTR 1325
+++ + + + F +P + RRI+N++K+QIP RI+TR
Sbjct: 831 AIESQAEHQYSCFQELPLKERRILNIDKAQIPTLRIRTR 869
Score = 60.8 bits (146), Expect(2) = 4e-25
Identities = 31/61 (50%), Positives = 39/61 (63%)
Frame = +1
Query: 853 LKCNPNGASRDNPRSSSYGYCIRDSICDLVYAQDKDIEINTNTEEESKAIRQALKYCREH 1032
+K N +GA R NP SS+G+CIRD DL+YA+ K I I TN E E+ AI AL+ C
Sbjct: 708 VKSNTDGACRGNPGLSSFGFCIRDDKGDLIYAKAKGIGIATNMEAETVAILTALRECSNR 767
Query: 1033 K 1035
K
Sbjct: 768 K 768
>ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 1035
Score = 69.3 bits (168), Expect(3) = 3e-24
Identities = 33/90 (36%), Positives = 59/90 (65%), Gaps = 1/90 (1%)
Frame = +3
Query: 1032 QIQLETDSLDLLNILHGLWTIPWELRDIVEDIKEDMRSVQDHIMHTFREGNKFADFHAN* 1211
+++LETDSL L N++ W IPWEL + +E+I E M+ + + H +RE N+ ADF AN
Sbjct: 742 KVRLETDSLALQNMITRSWKIPWELVEKLEEIHEIMQQIDVQVCHVYREVNQLADFIANT 801
Query: 1212 ELDNVDMEI-ANFINMPTEGRRIINMNKSQ 1298
++ ++ +F +P+ G++++N++K Q
Sbjct: 802 TINTEHKKVFHHFHQLPSLGKKLLNIDKHQ 831
Score = 65.9 bits (159), Expect(3) = 3e-24
Identities = 30/58 (51%), Positives = 41/58 (70%)
Frame = +1
Query: 859 CNPNGASRDNPRSSSYGYCIRDSICDLVYAQDKDIEINTNTEEESKAIRQALKYCREH 1032
CN +GAS+ NPR SSYGYCIRD DL+YA+ +I TN E E+ + +AL++C E+
Sbjct: 681 CNTDGASKGNPRMSSYGYCIRDKNGDLLYAEAHNIGETTNMEAEATTVWKALQFCYEN 738
Score = 25.4 bits (54), Expect(3) = 3e-24
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 786 LSSYRPKLYYAKVLWRMP 839
L +Y+P L+Y V WR P
Sbjct: 657 LQNYKPPLHYKVVRWRKP 674
>ref|XP_006343440.1| PREDICTED: uncharacterized protein LOC102595406 [Solanum tuberosum]
Length = 866
Score = 65.1 bits (157), Expect(3) = 7e-23
Identities = 29/61 (47%), Positives = 41/61 (67%)
Frame = +1
Query: 841 NQTGLKCNPNGASRDNPRSSSYGYCIRDSICDLVYAQDKDIEINTNTEEESKAIRQALKY 1020
N KCN +GAS+ NP SSY YC+RD +L+YAQ ++I TN E E+ AI++A+ +
Sbjct: 738 NSNTRKCNTDGASKGNPGKSSYAYCLRDQEGNLIYAQAEEIPETTNVEAEAVAIKEAIYH 797
Query: 1021 C 1023
C
Sbjct: 798 C 798
Score = 60.1 bits (144), Expect(3) = 7e-23
Identities = 30/60 (50%), Positives = 39/60 (65%)
Frame = +3
Query: 1029 TQIQLETDSLDLLNILHGLWTIPWELRDIVEDIKEDMRSVQDHIMHTFREGNKFADFHAN 1208
+++ +ETDSL L NIL G W IPW +R IVED M+ +I H +REGN AD+ AN
Sbjct: 804 SRVTIETDSLLLKNILQGNWEIPWNIRIIVEDTLTLMQYSTVNIEHIYREGNTLADYLAN 863
Score = 30.8 bits (68), Expect(3) = 7e-23
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +3
Query: 786 LSSYRPKLYYAKVLWRMPQSD 848
L +Y+P++YY K++W P S+
Sbjct: 720 LENYKPRIYYKKIIWMPPNSN 740
>ref|XP_006355175.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 143
Score = 65.9 bits (159), Expect(3) = 6e-20
Identities = 29/57 (50%), Positives = 42/57 (73%)
Frame = +1
Query: 853 LKCNPNGASRDNPRSSSYGYCIRDSICDLVYAQDKDIEINTNTEEESKAIRQALKYC 1023
+KCN +GAS+ NP SSYG+CIR+ +L+YA+ + I + TN + ES AI +AL+YC
Sbjct: 27 IKCNTDGASKGNPDQSSYGFCIRNHTGELLYAEVQSIGVTTNMDAESMAIWKALQYC 83
Score = 53.5 bits (127), Expect(3) = 6e-20
Identities = 29/54 (53%), Positives = 33/54 (61%)
Frame = +3
Query: 1032 QIQLETDSLDLLNILHGLWTIPWELRDIVEDIKEDMRSVQDHIMHTFREGNKFA 1193
Q+ LETDSL L NIL W PWEL + VEDI E M + I H FRE N+ A
Sbjct: 90 QVSLETDSLTLKNILVRNWKTPWELVERVEDILEIMSHMDVTIKHIFREVNQLA 143
Score = 26.9 bits (58), Expect(3) = 6e-20
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 786 LSSYRPKLYYAKVLWRMPQ 842
L SY+P LYY V W+ P+
Sbjct: 5 LQSYKPTLYYHVVNWKPPE 23
>ref|XP_006338863.1| PREDICTED: uncharacterized protein LOC102579795 [Solanum tuberosum]
Length = 778
Score = 52.4 bits (124), Expect(2) = 1e-12
Identities = 24/56 (42%), Positives = 34/56 (60%)
Frame = +3
Query: 1041 LETDSLDLLNILHGLWTIPWELRDIVEDIKEDMRSVQDHIMHTFREGNKFADFHAN 1208
LETDSL + IL G+W PW + +++ I+ R Q + H FREGNK ++ AN
Sbjct: 205 LETDSLIVSKILDGIWETPWSISLLIKKIQWLRRDGQVEVSHVFREGNKVVNYFAN 260
Score = 49.3 bits (116), Expect(2) = 1e-12
Identities = 21/59 (35%), Positives = 35/59 (59%)
Frame = +1
Query: 856 KCNPNGASRDNPRSSSYGYCIRDSICDLVYAQDKDIEINTNTEEESKAIRQALKYCREH 1032
KCN + AS+ NPR S+ G+CIR+ + +Y +++ T+ E E A + L++C H
Sbjct: 140 KCNTDCASKGNPRPSAGGFCIRNWNGEFIYTTSQELGFKTSLEAEVIAFERGLQFCMSH 198
>ref|XP_006344597.1| PREDICTED: uncharacterized protein LOC102605041 [Solanum tuberosum]
Length = 220
Score = 55.1 bits (131), Expect(2) = 1e-08
Identities = 26/62 (41%), Positives = 39/62 (62%)
Frame = +1
Query: 856 KCNPNGASRDNPRSSSYGYCIRDSICDLVYAQDKDIEINTNTEEESKAIRQALKYCREHK 1035
KCN +GASR N S+ +C+RDS DLV A+ I+ TN E+ A+++ KYC E+
Sbjct: 87 KCNTDGASRGNSGPSTIAFCVRDSSGDLVGAKGLRIQDTTNITAEAMALKEGRKYCLENG 146
Query: 1036 YN 1041
++
Sbjct: 147 FS 148
Score = 33.1 bits (74), Expect(2) = 1e-08
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = +3
Query: 1041 LETDSLDLLNILHGLWTIPWEL 1106
+E+DSL L+N+L+G W +PW +
Sbjct: 152 MESDSLSLINMLNGDWIVPWSV 173
>ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596481 [Solanum tuberosum]
Length = 1135
Score = 57.0 bits (136), Expect(2) = 3e-08
Identities = 28/75 (37%), Positives = 47/75 (62%)
Frame = +1
Query: 805 NSIMLRCCGECHNQTGLKCNPNGASRDNPRSSSYGYCIRDSICDLVYAQDKDIEINTNTE 984
+ ++++ E + +KCN +GA+R N +SS + +RD DL+YA+ K I I TN E
Sbjct: 1028 SEVVMQVQEEKPGRNKVKCNTDGAARGNSGASSTSFVVRDEEGDLIYARAKGIGIATNME 1087
Query: 985 EESKAIRQALKYCRE 1029
E+ A+ +A+ YC+E
Sbjct: 1088 AEALALLEAVWYCQE 1102
Score = 29.6 bits (65), Expect(2) = 3e-08
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +3
Query: 1041 LETDSLDLLNILHGLWTIPWEL 1106
+ETDSL L ++ W IPWEL
Sbjct: 1110 IETDSLVLKKMVDNQWKIPWEL 1131
>ref|XP_006351095.1| PREDICTED: polygalacturonase-like [Solanum tuberosum]
Length = 603
Score = 42.7 bits (99), Expect(2) = 1e-06
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +1
Query: 856 KCNPNGASRDNPRSSSYGYCIRDSICDLVYAQDKDIEINTNTEEESKAIRQALKYC 1023
KCN G+S+ N + SS +C+RDS LV+ + + IE E E + L +C
Sbjct: 473 KCNTGGSSKYNSQCSSKAFCVRDSQGSLVFVEAERIEFCDALEAEVTTFKNGLNHC 528
Score = 38.5 bits (88), Expect(2) = 1e-06
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +3
Query: 1041 LETDSLDLLNILHGLWTIPWELRDIVEDIKEDMRSVQDHIMHTFREGNKFA 1193
+ET+SL + IL G W IPW + + ++E ++ + H REGN A
Sbjct: 538 METNSLIIKRILDGDWEIPWNISVHIRYVQEILKEKGVVVAHILREGNTLA 588