BLASTX nr result

ID: Atropa21_contig00001263 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00001263
         (645 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABI34339.1| Polyprotein, 3'-partial, putative [Solanum demissum]    65   3e-13
ref|XP_004248959.1| PREDICTED: uncharacterized protein LOC101266...    61   3e-10
gb|AAT66771.2| Putative polyprotein, identical [Solanum demissum]      61   7e-10
ref|XP_004243109.1| PREDICTED: uncharacterized protein LOC101263...    64   5e-08
ref|XP_004250589.1| PREDICTED: uncharacterized protein LOC101263...    59   9e-07
ref|XP_004242076.1| PREDICTED: uncharacterized protein LOC101251...    58   2e-06

>gb|ABI34339.1| Polyprotein, 3'-partial, putative [Solanum demissum]
          Length = 1475

 Score = 65.5 bits (158), Expect(3) = 3e-13
 Identities = 33/61 (54%), Positives = 41/61 (67%)
 Frame = -1

Query: 591 KIE*SGSIVAQYENIFHSLSRITALLLPTEVERVRCFVRGLSIPLQLATLQLVALGAFFL 412
           ++E     VA+YE  FH LSR   ++LPTE ERVRCFVRGL + L+L T  LV+ G  FL
Sbjct: 238 RLEQGSMSVAEYETRFHELSRHAEMILPTEEERVRCFVRGLRLQLRLETQSLVSAGRSFL 297

Query: 411 D 409
           D
Sbjct: 298 D 298



 Score = 29.6 bits (65), Expect(3) = 3e-13
 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
 Frame = -2

Query: 416 F*TVAAHTRMVESVREKFPRSELDKRVRHFGQFXXXXXXXXXXXGR----YQHS*PSRPV 249
           F  V  H   +E +R +  +   +KR RH G +            R    ++    SRP 
Sbjct: 296 FLDVVDHASTMEHLRRE-AQGGSEKRARHEGSYSDSRPRSRDYHDRVGRRFRQGQSSRPT 354

Query: 248 QAAFQITDGCIGDQSS 201
           QA+ Q +DG  G+ SS
Sbjct: 355 QASLQASDGGRGEASS 370



 Score = 25.4 bits (54), Expect(3) = 3e-13
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 126 RACYSCREVLHFRRDC 79
           + CY C E+ H+ RDC
Sbjct: 395 QGCYECGEMGHWARDC 410


>ref|XP_004248959.1| PREDICTED: uncharacterized protein LOC101266468 [Solanum
           lycopersicum]
          Length = 927

 Score = 60.8 bits (146), Expect(3) = 3e-10
 Identities = 29/61 (47%), Positives = 41/61 (67%)
 Frame = -1

Query: 591 KIE*SGSIVAQYENIFHSLSRITALLLPTEVERVRCFVRGLSIPLQLATLQLVALGAFFL 412
           ++E     V++YE +FH LSR   ++LPTE ER+RCFVRGL   L++ T  +V+ G  FL
Sbjct: 277 RLEQGSMTVSEYEAMFHELSRHATMILPTEGERIRCFVRGLRYRLRVDTEHMVSAGRSFL 336

Query: 411 D 409
           D
Sbjct: 337 D 337



 Score = 27.7 bits (60), Expect(3) = 3e-10
 Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 4/69 (5%)
 Frame = -2

Query: 416 F*TVAAHTRMVESVREKFPRSELDKRVRHFGQFXXXXXXXXXXXGR----YQHS*PSRPV 249
           F  V  H R +E +  +  +   DKR R+ G +            R    +Q    SRPV
Sbjct: 335 FLDVVDHARSMEHIHRE-AQGGSDKRARYHGSYSESQTRGRDSYDRPRQRFQQGQTSRPV 393

Query: 248 QAAFQITDG 222
           Q A  +++G
Sbjct: 394 QVALPVSEG 402



 Score = 21.9 bits (45), Expect(3) = 3e-10
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = -1

Query: 147 IQQSLAARACYSCREVLHFRRDC 79
           I +  +   CY C  + H+ R+C
Sbjct: 429 ITKGRSTSGCYDCGALDHWSREC 451


>gb|AAT66771.2| Putative polyprotein, identical [Solanum demissum]
          Length = 1771

 Score = 60.8 bits (146), Expect(3) = 7e-10
 Identities = 31/61 (50%), Positives = 40/61 (65%)
 Frame = -1

Query: 591 KIE*SGSIVAQYENIFHSLSRITALLLPTEVERVRCFVRGLSIPLQLATLQLVALGAFFL 412
           ++E     V++YE  FH LSR   ++LPTE ERVRCFVRGL   L++ T  LV+ G  FL
Sbjct: 397 RLEQGPMTVSEYETRFHELSRHATMILPTEEERVRCFVRGLRYRLRVDTEHLVSAGRSFL 456

Query: 411 D 409
           D
Sbjct: 457 D 457



 Score = 26.9 bits (58), Expect(3) = 7e-10
 Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 4/69 (5%)
 Frame = -2

Query: 416 F*TVAAHTRMVESVREKFPRSELDKRVRHFGQFXXXXXXXXXXXGR----YQHS*PSRPV 249
           F  V  H R +E +  +  +   DKR R+ G +            R    +Q    SRPV
Sbjct: 455 FLDVVDHARSMEHIHRE-AQGGSDKRARYQGSYSGSQTRGRDSYDRPRQRFQQGQSSRPV 513

Query: 248 QAAFQITDG 222
           QAA   ++G
Sbjct: 514 QAALPASEG 522



 Score = 21.2 bits (43), Expect(3) = 7e-10
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = -1

Query: 132 AARACYSCREVLHFRRDC 79
           +A  C+ C  + H+ R+C
Sbjct: 554 SASGCFDCGALDHWSREC 571


>ref|XP_004243109.1| PREDICTED: uncharacterized protein LOC101263429 [Solanum
           lycopersicum]
          Length = 413

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 50/167 (29%), Positives = 81/167 (48%)
 Frame = -1

Query: 579 SGSIVAQYENIFHSLSRITALLLPTEVERVRCFVRGLSIPLQLATLQLVALGAFFLDCGS 400
           +G  VA+YE  FH+L+R  +++LPTE ERVR FV+GL IP++L   Q+      F +   
Sbjct: 136 NGMSVAEYEGKFHALARNASMILPTEDERVRRFVKGLIIPIRLGVSQVADSSVPFQNVVD 195

Query: 399 AY*DGRVCERKVSQIRA**EG*ALWTVQWFYFLLLWLLGEISAFIA*STGSSSFPDY*WM 220
           A        +++  IR   E  +  TV+     ++ ++  +   +  + GS S       
Sbjct: 196 A-------AKELEMIRR--EDLSSETVRGLVIQVIMVVLRLEVGVTWAEGSYS------- 239

Query: 219 HWRPIIEGS*SQYSDHDNSFSSISIQQSLAARACYSCREVLHFRRDC 79
             RP++ G    +S     FS     Q  + R C+ C ++ HF RDC
Sbjct: 240 --RPVVRGGHFGHS----GFS----HQPASRRGCFECGDMGHFVRDC 276


>ref|XP_004250589.1| PREDICTED: uncharacterized protein LOC101263780 [Solanum
           lycopersicum]
          Length = 508

 Score = 59.3 bits (142), Expect = 9e-07
 Identities = 29/61 (47%), Positives = 40/61 (65%)
 Frame = -1

Query: 591 KIE*SGSIVAQYENIFHSLSRITALLLPTEVERVRCFVRGLSIPLQLATLQLVALGAFFL 412
           ++E     +++YE  FH LSR   ++LPTE ERVRCFVRGL   L++ T  +V+ G  FL
Sbjct: 15  RLEQGSMTISEYEARFHELSRHATMILPTEGERVRCFVRGLRYRLRVDTEHMVSTGRSFL 74

Query: 411 D 409
           D
Sbjct: 75  D 75


>ref|XP_004242076.1| PREDICTED: uncharacterized protein LOC101251787 [Solanum
           lycopersicum]
          Length = 945

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 29/61 (47%), Positives = 40/61 (65%)
 Frame = -1

Query: 591 KIE*SGSIVAQYENIFHSLSRITALLLPTEVERVRCFVRGLSIPLQLATLQLVALGAFFL 412
           ++E     V++YE  FH LSR   ++LPTE ERVRCFVRGL   L++ T  +V+ G  F+
Sbjct: 284 RLEQVSMTVSEYEARFHELSRHATMILPTEGERVRCFVRGLRYRLRVDTEHMVSAGRSFI 343

Query: 411 D 409
           D
Sbjct: 344 D 344


Top