BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00001253
         (1337 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004250054.1| PREDICTED: uncharacterized RNA pseudouridine...   490   e-136
ref|XP_006361680.1| PREDICTED: uncharacterized protein LOC102601...   487   e-135
emb|CBI31423.3| unnamed protein product [Vitis vinifera]              434   e-119
ref|XP_002270186.1| PREDICTED: uncharacterized RNA pseudouridine...   434   e-119
ref|XP_006485600.1| PREDICTED: uncharacterized protein LOC102619...   432   e-118
ref|XP_006436494.1| hypothetical protein CICLE_v10031516mg [Citr...   432   e-118
gb|EOY18774.1| Pseudouridine synthase family protein isoform 2, ...   432   e-118
ref|XP_002311995.2| hypothetical protein POPTR_0008s03540g [Popu...   426   e-116
gb|EOY18773.1| Pseudouridine synthase family protein isoform 1 [...   425   e-116
ref|XP_004140075.1| PREDICTED: uncharacterized RNA pseudouridine...   424   e-116
ref|XP_002879786.1| pseudouridine synthase family protein [Arabi...   424   e-116
ref|XP_006411139.1| hypothetical protein EUTSA_v10016747mg [Eutr...   420   e-115
ref|NP_181447.2| protein SUPPRESSOR OF VARIEGATION 1 [Arabidopsi...   420   e-115
ref|XP_006294188.1| hypothetical protein CARUB_v10023183mg, part...   419   e-114
gb|EXB96209.1| putative RNA pseudouridine synthase [Morus notabi...   415   e-113
gb|EPS61841.1| hypothetical protein M569_12954, partial [Genlise...   414   e-113
gb|EMJ19261.1| hypothetical protein PRUPE_ppa006826mg [Prunus pe...   413   e-112
gb|ESW15747.1| hypothetical protein PHAVU_007G098900g [Phaseolus...   412   e-112
gb|AFK43008.1| unknown [Medicago truncatula]                          407   e-111
ref|XP_004496237.1| PREDICTED: uncharacterized RNA pseudouridine...   407   e-111

>ref|XP_004250054.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464-like
           [Solanum lycopersicum]
          Length = 414

 Score =  490 bits (1261), Expect = e-136
 Identities = 241/253 (95%), Positives = 247/253 (97%)
 Frame = +2

Query: 2   PPQRLAKVLAASGVASRRSSEELIFQGRVTVNGSVCNTPQTKVDPARDIIYVNGNRLPKK 181
           PPQRL+KVLAA+GVASRRSSEELIFQGRVTVNGSVC TPQTKVDPARD+IYVNGNRLPKK
Sbjct: 162 PPQRLSKVLAAAGVASRRSSEELIFQGRVTVNGSVCKTPQTKVDPARDVIYVNGNRLPKK 221

Query: 182 LPSKVYLALNKPKGYICSSGEKETKSVMTLFDDFIKSWDKRHPGQPKPRLFTVGRLDVAT 361
           LP+KVYLALNKPKGYICSSGEKETKSVM+LFDDFIKSWDKRHPGQPKPRLFTVGRLDVAT
Sbjct: 222 LPTKVYLALNKPKGYICSSGEKETKSVMSLFDDFIKSWDKRHPGQPKPRLFTVGRLDVAT 281

Query: 362 TGLIIVTNDGEFAHQISHPSSNLSKEYIATIDGEIHKRHLIAISEGTFIDGVHCTPDNVE 541
           TGLIIVTNDGEF HQISHPSSNLSKEYIATIDGE+HKRHLIAISEGT IDGVHCTPDNVE
Sbjct: 282 TGLIIVTNDGEFTHQISHPSSNLSKEYIATIDGEVHKRHLIAISEGTIIDGVHCTPDNVE 341

Query: 542 LLPRQPDKPRPRLRIVVHEGRNHEVRELVKNAGLQLRALKRIRIGGFRLPADLALGKHVE 721
           LLP QPD  RPRLRIVVHEGRNHEVRELVKNAGLQLRALKRIRIGGFRLPADLALGKHVE
Sbjct: 342 LLPGQPDLSRPRLRIVVHEGRNHEVRELVKNAGLQLRALKRIRIGGFRLPADLALGKHVE 401

Query: 722 LNQANLKALGWKS 760
           LNQANLKALGWKS
Sbjct: 402 LNQANLKALGWKS 414


>ref|XP_006361680.1| PREDICTED: uncharacterized protein LOC102601559 [Solanum tuberosum]
          Length = 413

 Score =  487 bits (1254), Expect = e-135
 Identities = 240/253 (94%), Positives = 246/253 (97%)
 Frame = +2

Query: 2   PPQRLAKVLAASGVASRRSSEELIFQGRVTVNGSVCNTPQTKVDPARDIIYVNGNRLPKK 181
           PPQRL+KVLAA+GVASRRSSEELIFQGRVTVNGSVC TPQTKVDPARD+IYVNGNRLPKK
Sbjct: 161 PPQRLSKVLAAAGVASRRSSEELIFQGRVTVNGSVCKTPQTKVDPARDVIYVNGNRLPKK 220

Query: 182 LPSKVYLALNKPKGYICSSGEKETKSVMTLFDDFIKSWDKRHPGQPKPRLFTVGRLDVAT 361
           LP+KVYLALNKPKGYICSSGEKETKSVM+LFDDFIKSWDKRHPGQPKPRLFTVGRLDVAT
Sbjct: 221 LPTKVYLALNKPKGYICSSGEKETKSVMSLFDDFIKSWDKRHPGQPKPRLFTVGRLDVAT 280

Query: 362 TGLIIVTNDGEFAHQISHPSSNLSKEYIATIDGEIHKRHLIAISEGTFIDGVHCTPDNVE 541
           TGLIIVTNDGEF HQISHPSSNLSKEYIATIDGE+HKRHLIAISEGT IDGVHC PDNVE
Sbjct: 281 TGLIIVTNDGEFTHQISHPSSNLSKEYIATIDGEVHKRHLIAISEGTVIDGVHCIPDNVE 340

Query: 542 LLPRQPDKPRPRLRIVVHEGRNHEVRELVKNAGLQLRALKRIRIGGFRLPADLALGKHVE 721
           LLP QPD  RPRLRIVVHEGRNHEVRELVKNAGLQLRALKRIRIGGFRLPADLALGKHVE
Sbjct: 341 LLPGQPDLSRPRLRIVVHEGRNHEVRELVKNAGLQLRALKRIRIGGFRLPADLALGKHVE 400

Query: 722 LNQANLKALGWKS 760
           LNQANLKALGWKS
Sbjct: 401 LNQANLKALGWKS 413


>emb|CBI31423.3| unnamed protein product [Vitis vinifera]
          Length = 296

 Score =  434 bits (1115), Expect = e-119
 Identities = 208/253 (82%), Positives = 238/253 (94%)
 Frame = +2

Query: 2   PPQRLAKVLAASGVASRRSSEELIFQGRVTVNGSVCNTPQTKVDPARDIIYVNGNRLPKK 181
           PPQRL+KVLAA+GVASRR+SEELIF+GRVTVNGSVCNTPQT+VDPARD+IYVNGNRLPKK
Sbjct: 44  PPQRLSKVLAAAGVASRRNSEELIFEGRVTVNGSVCNTPQTRVDPARDMIYVNGNRLPKK 103

Query: 182 LPSKVYLALNKPKGYICSSGEKETKSVMTLFDDFIKSWDKRHPGQPKPRLFTVGRLDVAT 361
           LP KVYLALNKPKGYICSSGEKE+KSV+ LFDD++KSW+K++PG PKPR+FTVGRLDVAT
Sbjct: 104 LPPKVYLALNKPKGYICSSGEKESKSVLCLFDDYLKSWNKQNPGVPKPRIFTVGRLDVAT 163

Query: 362 TGLIIVTNDGEFAHQISHPSSNLSKEYIATIDGEIHKRHLIAISEGTFIDGVHCTPDNVE 541
           TGLII+TNDG+FA ++SHPSS LSKEYIATIDG ++KRHLIAISEGT I+GVHCTPD+VE
Sbjct: 164 TGLIILTNDGDFAQKLSHPSSKLSKEYIATIDGVVNKRHLIAISEGTVIEGVHCTPDSVE 223

Query: 542 LLPRQPDKPRPRLRIVVHEGRNHEVRELVKNAGLQLRALKRIRIGGFRLPADLALGKHVE 721
           LLP QP+  +PRLR+VVHEGRNHEVRELVK+AGLQ+ +LKRIRIGGFRLP+DL  GKHVE
Sbjct: 224 LLPPQPNISKPRLRVVVHEGRNHEVRELVKSAGLQIHSLKRIRIGGFRLPSDLGHGKHVE 283

Query: 722 LNQANLKALGWKS 760
           L Q +LKALGWKS
Sbjct: 284 LKQGDLKALGWKS 296


>ref|XP_002270186.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464
           isoform 1 [Vitis vinifera]
          Length = 393

 Score =  434 bits (1115), Expect = e-119
 Identities = 208/253 (82%), Positives = 238/253 (94%)
 Frame = +2

Query: 2   PPQRLAKVLAASGVASRRSSEELIFQGRVTVNGSVCNTPQTKVDPARDIIYVNGNRLPKK 181
           PPQRL+KVLAA+GVASRR+SEELIF+GRVTVNGSVCNTPQT+VDPARD+IYVNGNRLPKK
Sbjct: 141 PPQRLSKVLAAAGVASRRNSEELIFEGRVTVNGSVCNTPQTRVDPARDMIYVNGNRLPKK 200

Query: 182 LPSKVYLALNKPKGYICSSGEKETKSVMTLFDDFIKSWDKRHPGQPKPRLFTVGRLDVAT 361
           LP KVYLALNKPKGYICSSGEKE+KSV+ LFDD++KSW+K++PG PKPR+FTVGRLDVAT
Sbjct: 201 LPPKVYLALNKPKGYICSSGEKESKSVLCLFDDYLKSWNKQNPGVPKPRIFTVGRLDVAT 260

Query: 362 TGLIIVTNDGEFAHQISHPSSNLSKEYIATIDGEIHKRHLIAISEGTFIDGVHCTPDNVE 541
           TGLII+TNDG+FA ++SHPSS LSKEYIATIDG ++KRHLIAISEGT I+GVHCTPD+VE
Sbjct: 261 TGLIILTNDGDFAQKLSHPSSKLSKEYIATIDGVVNKRHLIAISEGTVIEGVHCTPDSVE 320

Query: 542 LLPRQPDKPRPRLRIVVHEGRNHEVRELVKNAGLQLRALKRIRIGGFRLPADLALGKHVE 721
           LLP QP+  +PRLR+VVHEGRNHEVRELVK+AGLQ+ +LKRIRIGGFRLP+DL  GKHVE
Sbjct: 321 LLPPQPNISKPRLRVVVHEGRNHEVRELVKSAGLQIHSLKRIRIGGFRLPSDLGHGKHVE 380

Query: 722 LNQANLKALGWKS 760
           L Q +LKALGWKS
Sbjct: 381 LKQGDLKALGWKS 393


>ref|XP_006485600.1| PREDICTED: uncharacterized protein LOC102619728 [Citrus sinensis]
          Length = 401

 Score =  432 bits (1111), Expect = e-118
 Identities = 208/252 (82%), Positives = 233/252 (92%)
 Frame = +2

Query: 5   PQRLAKVLAASGVASRRSSEELIFQGRVTVNGSVCNTPQTKVDPARDIIYVNGNRLPKKL 184
           P+RL+KVLAA+GVASRRSSEELIFQG+VTVNGSVCNTPQT+VDPARDIIYVNG RLPKKL
Sbjct: 150 PERLSKVLAAAGVASRRSSEELIFQGQVTVNGSVCNTPQTRVDPARDIIYVNGKRLPKKL 209

Query: 185 PSKVYLALNKPKGYICSSGEKETKSVMTLFDDFIKSWDKRHPGQPKPRLFTVGRLDVATT 364
           P KVYLALNKPKGYICS+GEKE KSVM+LFDD++KSWDKR+PG P+PRLFTVGRLDVATT
Sbjct: 210 PPKVYLALNKPKGYICSAGEKEVKSVMSLFDDYLKSWDKRNPGLPRPRLFTVGRLDVATT 269

Query: 365 GLIIVTNDGEFAHQISHPSSNLSKEYIATIDGEIHKRHLIAISEGTFIDGVHCTPDNVEL 544
           GLIIVTNDG+FA  +SHPSS L KEYIATIDG ++KRHLIAISEGT I+G HCTPD VEL
Sbjct: 270 GLIIVTNDGDFAQAVSHPSSKLQKEYIATIDGAVNKRHLIAISEGTVIEGTHCTPDVVEL 329

Query: 545 LPRQPDKPRPRLRIVVHEGRNHEVRELVKNAGLQLRALKRIRIGGFRLPADLALGKHVEL 724
           LP QPD PRPR+RIVVHEGRNHEVRELVKNAGL+L +LKR+RIGGFRLP+DL +G HVEL
Sbjct: 330 LPPQPDIPRPRIRIVVHEGRNHEVRELVKNAGLKLYSLKRLRIGGFRLPSDLGIGMHVEL 389

Query: 725 NQANLKALGWKS 760
            Q++LK +GWKS
Sbjct: 390 KQSDLKLMGWKS 401


>ref|XP_006436494.1| hypothetical protein CICLE_v10031516mg [Citrus clementina]
           gi|557538690|gb|ESR49734.1| hypothetical protein
           CICLE_v10031516mg [Citrus clementina]
          Length = 451

 Score =  432 bits (1111), Expect = e-118
 Identities = 208/252 (82%), Positives = 233/252 (92%)
 Frame = +2

Query: 5   PQRLAKVLAASGVASRRSSEELIFQGRVTVNGSVCNTPQTKVDPARDIIYVNGNRLPKKL 184
           P+RL+KVLAA+GVASRRSSEELIFQG+VTVNGSVCNTPQT+VDPARDIIYVNG RLPKKL
Sbjct: 200 PERLSKVLAAAGVASRRSSEELIFQGQVTVNGSVCNTPQTRVDPARDIIYVNGKRLPKKL 259

Query: 185 PSKVYLALNKPKGYICSSGEKETKSVMTLFDDFIKSWDKRHPGQPKPRLFTVGRLDVATT 364
           P KVYLALNKPKGYICS+GEKE KSVM+LFDD++KSWDKR+PG P+PRLFTVGRLDVATT
Sbjct: 260 PPKVYLALNKPKGYICSAGEKEVKSVMSLFDDYLKSWDKRNPGLPRPRLFTVGRLDVATT 319

Query: 365 GLIIVTNDGEFAHQISHPSSNLSKEYIATIDGEIHKRHLIAISEGTFIDGVHCTPDNVEL 544
           GLIIVTNDG+FA  +SHPSS L KEYIATIDG ++KRHLIAISEGT I+G HCTPD VEL
Sbjct: 320 GLIIVTNDGDFAQAVSHPSSKLQKEYIATIDGAVNKRHLIAISEGTVIEGTHCTPDVVEL 379

Query: 545 LPRQPDKPRPRLRIVVHEGRNHEVRELVKNAGLQLRALKRIRIGGFRLPADLALGKHVEL 724
           LP QPD PRPR+RIVVHEGRNHEVRELVKNAGL+L +LKR+RIGGFRLP+DL +G HVEL
Sbjct: 380 LPPQPDIPRPRIRIVVHEGRNHEVRELVKNAGLKLYSLKRLRIGGFRLPSDLGIGMHVEL 439

Query: 725 NQANLKALGWKS 760
            Q++LK +GWKS
Sbjct: 440 KQSDLKLMGWKS 451


>gb|EOY18774.1| Pseudouridine synthase family protein isoform 2, partial [Theobroma
           cacao]
          Length = 398

 Score =  432 bits (1110), Expect = e-118
 Identities = 206/253 (81%), Positives = 234/253 (92%)
 Frame = +2

Query: 2   PPQRLAKVLAASGVASRRSSEELIFQGRVTVNGSVCNTPQTKVDPARDIIYVNGNRLPKK 181
           PPQRL+KVLAA+GVASRR SEELIF G+VTVNGSVCN PQT+VDPA+DIIYVNG+RLPKK
Sbjct: 146 PPQRLSKVLAAAGVASRRGSEELIFDGKVTVNGSVCNAPQTRVDPAKDIIYVNGSRLPKK 205

Query: 182 LPSKVYLALNKPKGYICSSGEKETKSVMTLFDDFIKSWDKRHPGQPKPRLFTVGRLDVAT 361
           LP K+YLALNKPKGYICSSGEKE KSV+ LF+D++K WDK + G PKPRLFTVGRLDVAT
Sbjct: 206 LPPKIYLALNKPKGYICSSGEKEFKSVLDLFEDYLKRWDKMNRGSPKPRLFTVGRLDVAT 265

Query: 362 TGLIIVTNDGEFAHQISHPSSNLSKEYIATIDGEIHKRHLIAISEGTFIDGVHCTPDNVE 541
           TGLIIVTNDG+FA ++SHPSSNL+KEYIATIDGE+ KRHLIAISEGT I+G+HC PD+VE
Sbjct: 266 TGLIIVTNDGDFAQKLSHPSSNLNKEYIATIDGEVKKRHLIAISEGTEIEGIHCIPDSVE 325

Query: 542 LLPRQPDKPRPRLRIVVHEGRNHEVRELVKNAGLQLRALKRIRIGGFRLPADLALGKHVE 721
           LLPRQPD  RPRLRIVVHEGRNHEVRELVKNAGL++ +LKR+RIGGFRLPADL LGKHVE
Sbjct: 326 LLPRQPDLSRPRLRIVVHEGRNHEVRELVKNAGLEIHSLKRVRIGGFRLPADLGLGKHVE 385

Query: 722 LNQANLKALGWKS 760
           L Q++L+A+GWKS
Sbjct: 386 LKQSDLRAMGWKS 398


>ref|XP_002311995.2| hypothetical protein POPTR_0008s03540g [Populus trichocarpa]
           gi|550332354|gb|EEE89362.2| hypothetical protein
           POPTR_0008s03540g [Populus trichocarpa]
          Length = 397

 Score =  426 bits (1094), Expect = e-116
 Identities = 202/250 (80%), Positives = 228/250 (91%)
 Frame = +2

Query: 8   QRLAKVLAASGVASRRSSEELIFQGRVTVNGSVCNTPQTKVDPARDIIYVNGNRLPKKLP 187
           QRL+KVLAA+GVASRRSSE LIF+G+VTVNGSVCNTPQT+VDP RD IYVNGNRLPKKLP
Sbjct: 147 QRLSKVLAAAGVASRRSSEALIFEGKVTVNGSVCNTPQTRVDPGRDAIYVNGNRLPKKLP 206

Query: 188 SKVYLALNKPKGYICSSGEKETKSVMTLFDDFIKSWDKRHPGQPKPRLFTVGRLDVATTG 367
            K+Y+ALNKPKGYICS GEKE+KSVM L DD+ +SWDKR+PG PKPRLFTVGRLDVATTG
Sbjct: 207 PKIYIALNKPKGYICSLGEKESKSVMCLLDDYFQSWDKRNPGLPKPRLFTVGRLDVATTG 266

Query: 368 LIIVTNDGEFAHQISHPSSNLSKEYIATIDGEIHKRHLIAISEGTFIDGVHCTPDNVELL 547
           LIIVTNDG+FA QI+HPSSNLSKEYIAT+DG + KRHL A+SEGT I+GV C PD+VELL
Sbjct: 267 LIIVTNDGDFAQQIAHPSSNLSKEYIATVDGVVSKRHLFAVSEGTVIEGVRCVPDSVELL 326

Query: 548 PRQPDKPRPRLRIVVHEGRNHEVRELVKNAGLQLRALKRIRIGGFRLPADLALGKHVELN 727
           P+QPD+PRPRLRIVVHEGRNHEVRELVKNAGL++ +LKR+RIGGFRLP+DL LGKH EL 
Sbjct: 327 PQQPDRPRPRLRIVVHEGRNHEVRELVKNAGLEIHSLKRVRIGGFRLPSDLGLGKHAELK 386

Query: 728 QANLKALGWK 757
           Q +LK LGWK
Sbjct: 387 QTDLKTLGWK 396


>gb|EOY18773.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao]
          Length = 453

 Score =  425 bits (1093), Expect = e-116
 Identities = 206/259 (79%), Positives = 234/259 (90%), Gaps = 6/259 (2%)
 Frame = +2

Query: 2   PPQRLAKVLAASGVASRRSSEELIFQGRVTVNGSVCNTPQ------TKVDPARDIIYVNG 163
           PPQRL+KVLAA+GVASRR SEELIF G+VTVNGSVCN PQ      T+VDPA+DIIYVNG
Sbjct: 195 PPQRLSKVLAAAGVASRRGSEELIFDGKVTVNGSVCNAPQASDNLQTRVDPAKDIIYVNG 254

Query: 164 NRLPKKLPSKVYLALNKPKGYICSSGEKETKSVMTLFDDFIKSWDKRHPGQPKPRLFTVG 343
           +RLPKKLP K+YLALNKPKGYICSSGEKE KSV+ LF+D++K WDK + G PKPRLFTVG
Sbjct: 255 SRLPKKLPPKIYLALNKPKGYICSSGEKEFKSVLDLFEDYLKRWDKMNRGSPKPRLFTVG 314

Query: 344 RLDVATTGLIIVTNDGEFAHQISHPSSNLSKEYIATIDGEIHKRHLIAISEGTFIDGVHC 523
           RLDVATTGLIIVTNDG+FA ++SHPSSNL+KEYIATIDGE+ KRHLIAISEGT I+G+HC
Sbjct: 315 RLDVATTGLIIVTNDGDFAQKLSHPSSNLNKEYIATIDGEVKKRHLIAISEGTEIEGIHC 374

Query: 524 TPDNVELLPRQPDKPRPRLRIVVHEGRNHEVRELVKNAGLQLRALKRIRIGGFRLPADLA 703
            PD+VELLPRQPD  RPRLRIVVHEGRNHEVRELVKNAGL++ +LKR+RIGGFRLPADL 
Sbjct: 375 IPDSVELLPRQPDLSRPRLRIVVHEGRNHEVRELVKNAGLEIHSLKRVRIGGFRLPADLG 434

Query: 704 LGKHVELNQANLKALGWKS 760
           LGKHVEL Q++L+A+GWKS
Sbjct: 435 LGKHVELKQSDLRAMGWKS 453


>ref|XP_004140075.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464-like
           [Cucumis sativus] gi|449490423|ref|XP_004158601.1|
           PREDICTED: uncharacterized RNA pseudouridine synthase
           aq_1464-like [Cucumis sativus]
          Length = 398

 Score =  424 bits (1089), Expect = e-116
 Identities = 207/251 (82%), Positives = 231/251 (92%)
 Frame = +2

Query: 8   QRLAKVLAASGVASRRSSEELIFQGRVTVNGSVCNTPQTKVDPARDIIYVNGNRLPKKLP 187
           QRL+KVLAA+GVASRRSSEELIF GRVTVNGSVCNTPQT+VDPARDIIYVNGNRLPKKLP
Sbjct: 148 QRLSKVLAAAGVASRRSSEELIFGGRVTVNGSVCNTPQTRVDPARDIIYVNGNRLPKKLP 207

Query: 188 SKVYLALNKPKGYICSSGEKETKSVMTLFDDFIKSWDKRHPGQPKPRLFTVGRLDVATTG 367
            KVYLALNKPKGYICSSG+KE+KSV++LFDD++KSWDK +PGQPKPRLFTVGRLDVATTG
Sbjct: 208 PKVYLALNKPKGYICSSGKKESKSVISLFDDYLKSWDKTYPGQPKPRLFTVGRLDVATTG 267

Query: 368 LIIVTNDGEFAHQISHPSSNLSKEYIATIDGEIHKRHLIAISEGTFIDGVHCTPDNVELL 547
           LIIVTNDG+FA  ISHPSS LSKEYIA IDG + K++LIAISEGT IDGVHCTPD+VELL
Sbjct: 268 LIIVTNDGDFAQGISHPSSGLSKEYIAAIDGTVSKQNLIAISEGTIIDGVHCTPDSVELL 327

Query: 548 PRQPDKPRPRLRIVVHEGRNHEVRELVKNAGLQLRALKRIRIGGFRLPADLALGKHVELN 727
           PRQPD  + RLRIVVHEGRNHEVRELVK AGL++ +LKR+RIGGFRLP+DL LG + EL 
Sbjct: 328 PRQPDISKSRLRIVVHEGRNHEVRELVKAAGLEIYSLKRVRIGGFRLPSDLGLGSYTELK 387

Query: 728 QANLKALGWKS 760
           Q+ LKA+GWKS
Sbjct: 388 QSELKAIGWKS 398


>ref|XP_002879786.1| pseudouridine synthase family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297325625|gb|EFH56045.1| pseudouridine
           synthase family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 412

 Score =  424 bits (1089), Expect = e-116
 Identities = 198/253 (78%), Positives = 233/253 (92%)
 Frame = +2

Query: 2   PPQRLAKVLAASGVASRRSSEELIFQGRVTVNGSVCNTPQTKVDPARDIIYVNGNRLPKK 181
           PPQRL+KVLAA+GVASRR+SEELIF G+VTVNG +CNTPQT+VDP+RDIIYVNGNR+PKK
Sbjct: 160 PPQRLSKVLAAAGVASRRTSEELIFDGKVTVNGILCNTPQTRVDPSRDIIYVNGNRIPKK 219

Query: 182 LPSKVYLALNKPKGYICSSGEKETKSVMTLFDDFIKSWDKRHPGQPKPRLFTVGRLDVAT 361
           LP KVY ALNKPKGYICSSGEKE KSV++LFD+++ SWDKR+PG PKPRLFTVGRLDVAT
Sbjct: 220 LPPKVYFALNKPKGYICSSGEKEIKSVISLFDEYLSSWDKRNPGTPKPRLFTVGRLDVAT 279

Query: 362 TGLIIVTNDGEFAHQISHPSSNLSKEYIATIDGEIHKRHLIAISEGTFIDGVHCTPDNVE 541
           TGLI+VTNDG+FA ++SHPSS+L KEYI T+ G+IHKRHL+AISEGT ++GVHC PD+VE
Sbjct: 280 TGLIVVTNDGDFAQKLSHPSSSLPKEYITTVVGDIHKRHLMAISEGTIVEGVHCVPDSVE 339

Query: 542 LLPRQPDKPRPRLRIVVHEGRNHEVRELVKNAGLQLRALKRIRIGGFRLPADLALGKHVE 721
           L+P+Q D PR RLRIVVHEGRNHEVRELVKNAGL++ +LKR+RIGGFRLP+DL LGKHVE
Sbjct: 340 LMPKQHDIPRARLRIVVHEGRNHEVRELVKNAGLEVHSLKRVRIGGFRLPSDLGLGKHVE 399

Query: 722 LNQANLKALGWKS 760
           L Q+ LKA+GWK+
Sbjct: 400 LKQSELKAMGWKN 412


>ref|XP_006411139.1| hypothetical protein EUTSA_v10016747mg [Eutrema salsugineum]
           gi|557112308|gb|ESQ52592.1| hypothetical protein
           EUTSA_v10016747mg [Eutrema salsugineum]
          Length = 403

 Score =  420 bits (1080), Expect = e-115
 Identities = 196/253 (77%), Positives = 229/253 (90%)
 Frame = +2

Query: 2   PPQRLAKVLAASGVASRRSSEELIFQGRVTVNGSVCNTPQTKVDPARDIIYVNGNRLPKK 181
           PPQRL+KVLAA+GVASRR+SEELIF G+VTVNGS+C  PQ +VDP RDIIYVNGNR+PKK
Sbjct: 151 PPQRLSKVLAAAGVASRRTSEELIFDGKVTVNGSLCTAPQIRVDPTRDIIYVNGNRIPKK 210

Query: 182 LPSKVYLALNKPKGYICSSGEKETKSVMTLFDDFIKSWDKRHPGQPKPRLFTVGRLDVAT 361
           LP KVY ALNKPKGYICSSGEKE KSV++LFDDF+ SWDKR+PG PKPRLFTVGRLDVAT
Sbjct: 211 LPPKVYFALNKPKGYICSSGEKEVKSVISLFDDFLASWDKRNPGTPKPRLFTVGRLDVAT 270

Query: 362 TGLIIVTNDGEFAHQISHPSSNLSKEYIATIDGEIHKRHLIAISEGTFIDGVHCTPDNVE 541
           TGLI+VTNDG+FA ++SHPSS+L KEYI T+ G++HKRHL+ ISEGT ++GVHC PD+VE
Sbjct: 271 TGLIVVTNDGDFAQKLSHPSSSLPKEYITTVVGDVHKRHLMTISEGTIVEGVHCVPDSVE 330

Query: 542 LLPRQPDKPRPRLRIVVHEGRNHEVRELVKNAGLQLRALKRIRIGGFRLPADLALGKHVE 721
           L+P+Q D PR RLRIVVHEGRNHEVRE+VKNAGL++ +LKR+RIGGFRLP+DL LGKHVE
Sbjct: 331 LMPKQHDIPRARLRIVVHEGRNHEVREIVKNAGLEVHSLKRVRIGGFRLPSDLGLGKHVE 390

Query: 722 LNQANLKALGWKS 760
           L Q+ LKA+GWKS
Sbjct: 391 LKQSELKAMGWKS 403


>ref|NP_181447.2| protein SUPPRESSOR OF VARIEGATION 1 [Arabidopsis thaliana]
           gi|21617894|gb|AAM66944.1| unknown [Arabidopsis
           thaliana] gi|26450440|dbj|BAC42334.1| unknown protein
           [Arabidopsis thaliana] gi|330254545|gb|AEC09639.1|
           pseudouridine synthase family protein [Arabidopsis
           thaliana]
          Length = 410

 Score =  420 bits (1080), Expect = e-115
 Identities = 197/252 (78%), Positives = 231/252 (91%)
 Frame = +2

Query: 5   PQRLAKVLAASGVASRRSSEELIFQGRVTVNGSVCNTPQTKVDPARDIIYVNGNRLPKKL 184
           PQRL+KVLAA+GVASRR+SEELIF G+VTVNG +CNTPQT+VDP+RDIIYVNGNR+PKKL
Sbjct: 159 PQRLSKVLAAAGVASRRTSEELIFDGKVTVNGILCNTPQTRVDPSRDIIYVNGNRIPKKL 218

Query: 185 PSKVYLALNKPKGYICSSGEKETKSVMTLFDDFIKSWDKRHPGQPKPRLFTVGRLDVATT 364
           P KVY ALNKPKGYICSSGEKE KS ++LFD+++ SWDKR+PG PKPRLFTVGRLDVATT
Sbjct: 219 PPKVYFALNKPKGYICSSGEKEIKSAISLFDEYLSSWDKRNPGTPKPRLFTVGRLDVATT 278

Query: 365 GLIIVTNDGEFAHQISHPSSNLSKEYIATIDGEIHKRHLIAISEGTFIDGVHCTPDNVEL 544
           GLI+VTNDG+FA ++SHPSS+L KEYI T+ G+IHKRHL+AISEGT ++GVHC PD+VEL
Sbjct: 279 GLIVVTNDGDFAQKLSHPSSSLPKEYITTVVGDIHKRHLMAISEGTMVEGVHCVPDSVEL 338

Query: 545 LPRQPDKPRPRLRIVVHEGRNHEVRELVKNAGLQLRALKRIRIGGFRLPADLALGKHVEL 724
           +P+Q D PR RLRIVVHEGRNHEVRELVKNAGL++ +LKR+RIGGFRLP+DL LGKHVEL
Sbjct: 339 MPKQHDIPRARLRIVVHEGRNHEVRELVKNAGLEVHSLKRVRIGGFRLPSDLGLGKHVEL 398

Query: 725 NQANLKALGWKS 760
            Q+ LKALGWK+
Sbjct: 399 KQSELKALGWKN 410


>ref|XP_006294188.1| hypothetical protein CARUB_v10023183mg, partial [Capsella rubella]
           gi|482562896|gb|EOA27086.1| hypothetical protein
           CARUB_v10023183mg, partial [Capsella rubella]
          Length = 456

 Score =  419 bits (1078), Expect = e-114
 Identities = 199/252 (78%), Positives = 228/252 (90%)
 Frame = +2

Query: 2   PPQRLAKVLAASGVASRRSSEELIFQGRVTVNGSVCNTPQTKVDPARDIIYVNGNRLPKK 181
           PPQRL+KVLAA+GVASRR+SEELIF G+VTVNG +CNTPQT+VDP+RDIIYVNGNR+PKK
Sbjct: 204 PPQRLSKVLAAAGVASRRTSEELIFDGKVTVNGILCNTPQTRVDPSRDIIYVNGNRIPKK 263

Query: 182 LPSKVYLALNKPKGYICSSGEKETKSVMTLFDDFIKSWDKRHPGQPKPRLFTVGRLDVAT 361
           LP KVY ALNKPKGYICSSGEKE KSV++LFD+++ SWDKR+PG PKPRLFTVGRLDVAT
Sbjct: 264 LPPKVYFALNKPKGYICSSGEKEVKSVISLFDEYMASWDKRNPGTPKPRLFTVGRLDVAT 323

Query: 362 TGLIIVTNDGEFAHQISHPSSNLSKEYIATIDGEIHKRHLIAISEGTFIDGVHCTPDNVE 541
           TGLIIVTNDG+FA Q+SHPSS+L KEYI T+ G+IHKRHL+AISEGT ++GVHC PD VE
Sbjct: 324 TGLIIVTNDGDFAQQLSHPSSSLPKEYITTVVGDIHKRHLMAISEGTIVEGVHCVPDLVE 383

Query: 542 LLPRQPDKPRPRLRIVVHEGRNHEVRELVKNAGLQLRALKRIRIGGFRLPADLALGKHVE 721
           L+P+Q D PR RLRIVVHEGRNHEVRELVKNAGL + +LKR+RIGGFRLP+DL LGKH E
Sbjct: 384 LMPKQHDIPRARLRIVVHEGRNHEVRELVKNAGLVVHSLKRVRIGGFRLPSDLGLGKHAE 443

Query: 722 LNQANLKALGWK 757
           L Q+ LK LGWK
Sbjct: 444 LKQSELKVLGWK 455


>gb|EXB96209.1| putative RNA pseudouridine synthase [Morus notabilis]
          Length = 404

 Score =  415 bits (1067), Expect = e-113
 Identities = 198/251 (78%), Positives = 230/251 (91%)
 Frame = +2

Query: 8   QRLAKVLAASGVASRRSSEELIFQGRVTVNGSVCNTPQTKVDPARDIIYVNGNRLPKKLP 187
           QRL+KVLAA+GVASRR+SEELI +GRVTVNGSVCNTPQT+VDPA+D+IYVNGNRLPK+LP
Sbjct: 156 QRLSKVLAAAGVASRRNSEELILEGRVTVNGSVCNTPQTRVDPAKDVIYVNGNRLPKRLP 215

Query: 188 SKVYLALNKPKGYICSSGEKETKSVMTLFDDFIKSWDKRHPGQPKPRLFTVGRLDVATTG 367
            KVYLALNKPKGYICS G+K  KSVM+LFDD++K WDKR+ GQ KPRLFTVGRLDVATTG
Sbjct: 216 PKVYLALNKPKGYICSVGDK--KSVMSLFDDYLKIWDKRNLGQSKPRLFTVGRLDVATTG 273

Query: 368 LIIVTNDGEFAHQISHPSSNLSKEYIATIDGEIHKRHLIAISEGTFIDGVHCTPDNVELL 547
           LIIVTNDG+FA ++SHPSSNLSKEYIATI+G + K+HL+ ISEGTFIDGVHC PD+VELL
Sbjct: 274 LIIVTNDGDFAQKLSHPSSNLSKEYIATIEGTVSKKHLLVISEGTFIDGVHCVPDSVELL 333

Query: 548 PRQPDKPRPRLRIVVHEGRNHEVRELVKNAGLQLRALKRIRIGGFRLPADLALGKHVELN 727
           P QP+ PRPRLR+VVH+GR HEVREL+KNAGL++ +LKR+RIGG+RLP+DL LGKHVEL 
Sbjct: 334 PNQPEMPRPRLRVVVHDGRKHEVRELMKNAGLEIHSLKRVRIGGYRLPSDLGLGKHVELK 393

Query: 728 QANLKALGWKS 760
           Q +L ALGWKS
Sbjct: 394 QGDLSALGWKS 404


>gb|EPS61841.1| hypothetical protein M569_12954, partial [Genlisea aurea]
          Length = 273

 Score =  414 bits (1064), Expect = e-113
 Identities = 201/252 (79%), Positives = 228/252 (90%)
 Frame = +2

Query: 2   PPQRLAKVLAASGVASRRSSEELIFQGRVTVNGSVCNTPQTKVDPARDIIYVNGNRLPKK 181
           PPQRLAKVLA++GVASRRS EELIFQG+V+VNGSVC TPQT+VDP +D+IYVNG RL KK
Sbjct: 19  PPQRLAKVLASAGVASRRSCEELIFQGKVSVNGSVCKTPQTRVDPGQDVIYVNGCRLAKK 78

Query: 182 LPSKVYLALNKPKGYICSSGEKETKSVMTLFDDFIKSWDKRHPGQPKPRLFTVGRLDVAT 361
           LP KVYLALNKPKGYICS GEKETKSV++L DDF KSW +R+PG P+PRLFTVGRLDVAT
Sbjct: 79  LPPKVYLALNKPKGYICSVGEKETKSVISLLDDFTKSWRRRNPGVPQPRLFTVGRLDVAT 138

Query: 362 TGLIIVTNDGEFAHQISHPSSNLSKEYIATIDGEIHKRHLIAISEGTFIDGVHCTPDNVE 541
           +GLIIVTNDGEFA++ISHPSSNLSKEYIATI+G + K+ L+ IS+GT IDGVHCTPD+VE
Sbjct: 139 SGLIIVTNDGEFANKISHPSSNLSKEYIATINGTVSKQSLLTISKGTTIDGVHCTPDSVE 198

Query: 542 LLPRQPDKPRPRLRIVVHEGRNHEVRELVKNAGLQLRALKRIRIGGFRLPADLALGKHVE 721
           LLP QPD  +PR+RIVVHEGR HEVRELV+NAGLQ+ ALKR+RIGGFRLP DL LGKHVE
Sbjct: 199 LLPPQPDVSKPRIRIVVHEGRKHEVRELVENAGLQIHALKRVRIGGFRLPRDLGLGKHVE 258

Query: 722 LNQANLKALGWK 757
           LN ANL+ALGWK
Sbjct: 259 LNDANLRALGWK 270


>gb|EMJ19261.1| hypothetical protein PRUPE_ppa006826mg [Prunus persica]
          Length = 393

 Score =  413 bits (1061), Expect = e-112
 Identities = 199/251 (79%), Positives = 230/251 (91%)
 Frame = +2

Query: 8   QRLAKVLAASGVASRRSSEELIFQGRVTVNGSVCNTPQTKVDPARDIIYVNGNRLPKKLP 187
           QRL+KVLAA+GVASRRSSE+LIF G+VTVNGSVCNTPQ++VDP RDIIYVNGNRLPK+LP
Sbjct: 145 QRLSKVLAAAGVASRRSSEQLIFDGKVTVNGSVCNTPQSRVDPGRDIIYVNGNRLPKRLP 204

Query: 188 SKVYLALNKPKGYICSSGEKETKSVMTLFDDFIKSWDKRHPGQPKPRLFTVGRLDVATTG 367
            KVYLALNKPKGYIC+SGE   KSV++LF+D++K+WDKR+ G P+PRLFTVGRLDVATTG
Sbjct: 205 PKVYLALNKPKGYICASGEN--KSVLSLFEDYLKTWDKRNSGIPRPRLFTVGRLDVATTG 262

Query: 368 LIIVTNDGEFAHQISHPSSNLSKEYIATIDGEIHKRHLIAISEGTFIDGVHCTPDNVELL 547
           LIIVTNDG+FA +ISHPSSNLSKEYIA I+G + KRHL+AISEGT I+GVHCTPD+VELL
Sbjct: 263 LIIVTNDGDFAQKISHPSSNLSKEYIAAIEGVVSKRHLLAISEGTVIEGVHCTPDSVELL 322

Query: 548 PRQPDKPRPRLRIVVHEGRNHEVRELVKNAGLQLRALKRIRIGGFRLPADLALGKHVELN 727
           P+QPD  RPRLRIVVHEGRNHEVRELVKNAGL++ +LKR+RIGGFRLP+DL LGKH+ L 
Sbjct: 323 PQQPDMSRPRLRIVVHEGRNHEVRELVKNAGLEIHSLKRVRIGGFRLPSDLGLGKHMALK 382

Query: 728 QANLKALGWKS 760
           Q +L ALGWKS
Sbjct: 383 QGDLSALGWKS 393


>gb|ESW15747.1| hypothetical protein PHAVU_007G098900g [Phaseolus vulgaris]
          Length = 403

 Score =  412 bits (1058), Expect = e-112
 Identities = 197/250 (78%), Positives = 225/250 (90%)
 Frame = +2

Query: 11  RLAKVLAASGVASRRSSEELIFQGRVTVNGSVCNTPQTKVDPARDIIYVNGNRLPKKLPS 190
           RL+KVLAASGVASRRS EELIF+G+VTVNGSVCNTPQT+VDPA+D+IYVNGNRLPK+ P 
Sbjct: 154 RLSKVLAASGVASRRSCEELIFEGKVTVNGSVCNTPQTRVDPAKDVIYVNGNRLPKRQPQ 213

Query: 191 KVYLALNKPKGYICSSGEKETKSVMTLFDDFIKSWDKRHPGQPKPRLFTVGRLDVATTGL 370
           KVYLALNKPKGYICSSGE E+KSV++LFDDF+ +W K+ PG P PRLFTVGRLDVATTGL
Sbjct: 214 KVYLALNKPKGYICSSGENESKSVISLFDDFLNTWGKKRPGVPTPRLFTVGRLDVATTGL 273

Query: 371 IIVTNDGEFAHQISHPSSNLSKEYIATIDGEIHKRHLIAISEGTFIDGVHCTPDNVELLP 550
           IIVTNDG+FA ++SHPSSNLSKEYIAT+DG ++KRHL+AISEGT I+GVHC PD VE+LP
Sbjct: 274 IIVTNDGDFAQKLSHPSSNLSKEYIATVDGLVYKRHLMAISEGTTIEGVHCVPDAVEILP 333

Query: 551 RQPDKPRPRLRIVVHEGRNHEVRELVKNAGLQLRALKRIRIGGFRLPADLALGKHVELNQ 730
           RQ D  R R+RIVVHEGR HEVRELVKNAGL++ +LKRIRIGGFRLP DL LGK++ELN 
Sbjct: 334 RQADMQRARIRIVVHEGRKHEVRELVKNAGLEIHSLKRIRIGGFRLPPDLGLGKYIELNP 393

Query: 731 ANLKALGWKS 760
            NL ALGWKS
Sbjct: 394 TNLNALGWKS 403


>gb|AFK43008.1| unknown [Medicago truncatula]
          Length = 408

 Score =  407 bits (1047), Expect = e-111
 Identities = 194/247 (78%), Positives = 224/247 (90%)
 Frame = +2

Query: 11  RLAKVLAASGVASRRSSEELIFQGRVTVNGSVCNTPQTKVDPARDIIYVNGNRLPKKLPS 190
           RL+KVLAASGVASRRS E+LIF+G+VTVNGSVCNTPQTKVDP++D IYVNG+RLPK+ P 
Sbjct: 154 RLSKVLAASGVASRRSCEDLIFKGKVTVNGSVCNTPQTKVDPSKDNIYVNGSRLPKRQPH 213

Query: 191 KVYLALNKPKGYICSSGEKETKSVMTLFDDFIKSWDKRHPGQPKPRLFTVGRLDVATTGL 370
           KVYLALNKPKGYICSSGEKE+KSV++LFDDF+ SWDK+HPG P PRLFTVGRLDVATTGL
Sbjct: 214 KVYLALNKPKGYICSSGEKESKSVISLFDDFLSSWDKKHPGVPPPRLFTVGRLDVATTGL 273

Query: 371 IIVTNDGEFAHQISHPSSNLSKEYIATIDGEIHKRHLIAISEGTFIDGVHCTPDNVELLP 550
           +IVTNDG+FA ++SHPSSN SKEYIAT+DG +HKRHL AISEGT I+GVHC PD+VELLP
Sbjct: 274 LIVTNDGDFAQKLSHPSSNFSKEYIATVDGLVHKRHLTAISEGTTIEGVHCVPDSVELLP 333

Query: 551 RQPDKPRPRLRIVVHEGRNHEVRELVKNAGLQLRALKRIRIGGFRLPADLALGKHVELNQ 730
           R PD  R RLRIVVH+GR HEVRELVK+AGL++ +LKR+RIGGFRLP DL +GK++ELN 
Sbjct: 334 RMPDTQRSRLRIVVHDGRKHEVRELVKSAGLEIHSLKRVRIGGFRLPPDLGIGKYIELNP 393

Query: 731 ANLKALG 751
            NLKALG
Sbjct: 394 TNLKALG 400


>ref|XP_004496237.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464-like
           [Cicer arietinum]
          Length = 410

 Score =  407 bits (1045), Expect = e-111
 Identities = 193/247 (78%), Positives = 223/247 (90%)
 Frame = +2

Query: 11  RLAKVLAASGVASRRSSEELIFQGRVTVNGSVCNTPQTKVDPARDIIYVNGNRLPKKLPS 190
           RL+KVLAASGVASRRS E+LIF+G+VTVNGSVCNTPQT+VDPA+D+IYVNG+RLPK+ P 
Sbjct: 155 RLSKVLAASGVASRRSCEDLIFEGKVTVNGSVCNTPQTRVDPAKDVIYVNGSRLPKRQPH 214

Query: 191 KVYLALNKPKGYICSSGEKETKSVMTLFDDFIKSWDKRHPGQPKPRLFTVGRLDVATTGL 370
           KVYLALNKPKGYICSSGEKE+KSV++LFDDF+ SWDK+HPG P PRLFTVGRLDVATTGL
Sbjct: 215 KVYLALNKPKGYICSSGEKESKSVLSLFDDFLSSWDKKHPGVPMPRLFTVGRLDVATTGL 274

Query: 371 IIVTNDGEFAHQISHPSSNLSKEYIATIDGEIHKRHLIAISEGTFIDGVHCTPDNVELLP 550
           +IVTNDG+FA ++SHPSSN SKEYIAT++G +HKRHL AISEGT I+GVHC PD+VELLP
Sbjct: 275 LIVTNDGDFAQRLSHPSSNFSKEYIATVNGLVHKRHLTAISEGTTIEGVHCVPDSVELLP 334

Query: 551 RQPDKPRPRLRIVVHEGRNHEVRELVKNAGLQLRALKRIRIGGFRLPADLALGKHVELNQ 730
             PD  R RLRIVVH+GR HEVRELVKNAGL++ +LKR+RIGGFRLP DL LGK++ELN 
Sbjct: 335 SMPDAQRARLRIVVHDGRKHEVRELVKNAGLEIHSLKRVRIGGFRLPPDLGLGKYIELNP 394

Query: 731 ANLKALG 751
             LKALG
Sbjct: 395 TKLKALG 401