BLASTX nr result

ID: Atropa21_contig00000878 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00000878
         (2529 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004246814.1| PREDICTED: uncharacterized protein LOC101252...    74   2e-10
ref|XP_004243109.1| PREDICTED: uncharacterized protein LOC101263...    64   1e-09
gb|AAT66771.2| Putative polyprotein, identical [Solanum demissum]      65   1e-07

>ref|XP_004246814.1| PREDICTED: uncharacterized protein LOC101252518 [Solanum
           lycopersicum]
          Length = 588

 Score = 74.3 bits (181), Expect = 2e-10
 Identities = 53/160 (33%), Positives = 75/160 (46%), Gaps = 1/160 (0%)
 Frame = -3

Query: 931 LFTTWA*WSPMKLNLLLSR*-GEAK*W*RTYVKSRRVKSLSLTWA*FTHIFLKKFIPPSK 755
           +F  W  WS M+L +LL +  G AK W R Y+ SR   S  L+W  FT +FL KFIP S+
Sbjct: 38  IFLDW--WSLMELTILLFQMTGSAKQWWRDYISSRPAGSSPLSWTQFTQVFLSKFIPHSE 95

Query: 754 RDELWGQFEHLRQGDIKYLNCAHTDIRVLSDMCSSMVQFSGVGLTCIVYEMRFIELSCYV 575
           R+    +FE L+QG                             ++   YE +F  L+ + 
Sbjct: 96  RERKRTEFEGLQQG----------------------------SMSVAEYEGKFHALARHA 127

Query: 574 AFLIPIEIENVRRSIEGLIYVSRLDMACEVEHGFYFM*VV 455
           + ++P E E VRR ++GLI   RL  +     G  F  VV
Sbjct: 128 SMILPTEAERVRRFVKGLIIPIRLGFSQVAASGVPFQKVV 167


>ref|XP_004243109.1| PREDICTED: uncharacterized protein LOC101263429 [Solanum
           lycopersicum]
          Length = 413

 Score = 63.5 bits (153), Expect(2) = 1e-09
 Identities = 44/139 (31%), Positives = 62/139 (44%)
 Frame = -3

Query: 871 GEAK*W*RTYVKSRRVKSLSLTWA*FTHIFLKKFIPPSKRDELWGQFEHLRQGDIKYLNC 692
           G A  W R Y+ SR V S  L+W  FT +FL KF P S+R+    QFE L+Q        
Sbjct: 84  GSANQWWRDYISSRPVGSHPLSWTQFTQVFLSKFFPRSERERKRAQFEGLQQN------- 136

Query: 691 AHTDIRVLSDMCSSMVQFSGVGLTCIVYEMRFIELSCYVAFLIPIEIENVRRSIEGLIYV 512
                                G++   YE +F  L+   + ++P E E VRR ++GLI  
Sbjct: 137 ---------------------GMSVAEYEGKFHALARNASMILPTEDERVRRFVKGLIIP 175

Query: 511 SRLDMACEVEHGFYFM*VV 455
            RL ++   +    F  VV
Sbjct: 176 IRLGVSQVADSSVPFQNVV 194



 Score = 28.5 bits (62), Expect(2) = 1e-09
 Identities = 11/23 (47%), Positives = 18/23 (78%)
 Frame = -2

Query: 935 RFIHNLGIVESNEVEFTTI*VGG 867
           + +HNLG+VES+ V++TT  + G
Sbjct: 62  KMLHNLGLVESHGVDYTTFQMTG 84


>gb|AAT66771.2| Putative polyprotein, identical [Solanum demissum]
          Length = 1771

 Score = 65.5 bits (158), Expect = 1e-07
 Identities = 47/141 (33%), Positives = 64/141 (45%)
 Frame = -3

Query: 871 GEAK*W*RTYVKSRRVKSLSLTWA*FTHIFLKKFIPPSKRDELWGQFEHLRQGDIKYLNC 692
           G A+ W R+Y +SR V S  ++W+ F+  FL +F+P S RD L  QF  L QG       
Sbjct: 349 GPARQWWRSYRESRPVGSPHVSWSEFSEAFLARFMPRSVRDRLRDQFSRLEQGP------ 402

Query: 691 AHTDIRVLSDMCSSMVQFSGVGLTCIVYEMRFIELSCYVAFLIPIEIENVRRSIEGLIYV 512
                                 +T   YE RF ELS +   ++P E E VR  + GL Y 
Sbjct: 403 ----------------------MTVSEYETRFHELSRHATMILPTEEERVRCFVRGLRYR 440

Query: 511 SRLDMACEVEHGFYFM*VVTY 449
            R+D    V  G  F+ VV +
Sbjct: 441 LRVDTEHLVSAGRSFLDVVDH 461


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