BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00000877
         (1781 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006357840.1| PREDICTED: chloroplastic group IIA intron sp...  1004   0.0  
ref|XP_004233710.1| PREDICTED: chloroplastic group IIA intron sp...   937   0.0  
ref|XP_002280704.1| PREDICTED: chloroplastic group IIA intron sp...   740   0.0  
ref|XP_006603054.1| PREDICTED: chloroplastic group IIA intron sp...   689   0.0  
gb|EMJ18512.1| hypothetical protein PRUPE_ppa016241mg [Prunus pe...   689   0.0  
ref|XP_006603055.1| PREDICTED: chloroplastic group IIA intron sp...   689   0.0  
ref|XP_006603058.1| PREDICTED: chloroplastic group IIA intron sp...   685   0.0  
ref|XP_002516757.1| conserved hypothetical protein [Ricinus comm...   684   0.0  
ref|XP_004507538.1| PREDICTED: chloroplastic group IIA intron sp...   683   0.0  
gb|EXC20503.1| Chloroplastic group IIA intron splicing facilitat...   681   0.0  
ref|XP_006482225.1| PREDICTED: chloroplastic group IIA intron sp...   678   0.0  
gb|EOY04144.1| maize chloroplast splicing factor CRS1, putative ...   660   0.0  
gb|EOY04143.1| maize chloroplast splicing factor CRS1, putative ...   660   0.0  
gb|EOY04145.1| maize chloroplast splicing factor CRS1, putative ...   660   0.0  
gb|ESW11169.1| hypothetical protein PHAVU_008G007700g [Phaseolus...   659   0.0  
ref|XP_002306656.2| hypothetical protein POPTR_0005s15420g [Popu...   658   0.0  
gb|EOY04146.1| maize chloroplast splicing factor CRS1, putative ...   658   0.0  
ref|XP_002329296.1| predicted protein [Populus trichocarpa]           658   0.0  
ref|XP_004138635.1| PREDICTED: chloroplastic group IIA intron sp...   655   0.0  
ref|XP_004158502.1| PREDICTED: LOW QUALITY PROTEIN: chloroplasti...   652   0.0  

>ref|XP_006357840.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Solanum tuberosum]
          Length = 802

 Score = 1004 bits (2595), Expect = 0.0
 Identities = 511/594 (86%), Positives = 538/594 (90%), Gaps = 1/594 (0%)
 Frame = +2

Query: 2    RKNGRKMPWESEERIVYRRMKKEKVLTAAESNLDAMLLERLRGEAARIQKWVKVKKAGVT 181
            RK G KMPWESE RIVYRRMKKEKV+  AESNLDAMLLERLRGEAARIQKWVKVKKAGVT
Sbjct: 209  RKIGVKMPWESEVRIVYRRMKKEKVVMTAESNLDAMLLERLRGEAARIQKWVKVKKAGVT 268

Query: 182  RAVVDQIHLVWKNNELAMLKFDLPLCRNMDRAREIIEMKTGGSVVWSKKNALVIYRGCDY 361
            R VVDQIH +WKNNELAMLKFDLPLCRNMDRAREI+EMKTGG VVW K+NALV+YRGC Y
Sbjct: 269  RTVVDQIHFIWKNNELAMLKFDLPLCRNMDRAREIVEMKTGGFVVWMKQNALVVYRGCSY 328

Query: 362  TLRQKDDPELHHDFLCSQQNSSFTENIKETXXXXXXXXXXXXXXXXXXXXXXXXX-LAIN 538
            TL+QK   EL HDFLCS QNSSFTENIK+T                          LA+N
Sbjct: 329  TLQQK---ELQHDFLCSHQNSSFTENIKQTSIFSPLNSSGSSEDEMISVGNSEEDSLAMN 385

Query: 539  ESLYEREANRLLDDLGPRYVDWWWPKPLPVDADLLPEVIPGFKPPFRLCPPRSRSKLTDD 718
            ESLY REANRLLDDLGPRYVDWWWPKPLPV+ADLLPEV+PGFKPPFRLCPPRSRSKLTDD
Sbjct: 386  ESLYVREANRLLDDLGPRYVDWWWPKPLPVNADLLPEVVPGFKPPFRLCPPRSRSKLTDD 445

Query: 719  ELTHLRKLARSLPTHFVLGRNRKLQGLATAVVKLWEKFHIAKIALKWGIPNTSNELMANE 898
            ELT LRKLARSLPTHFVLGRNRKLQGLA AVVKLWEK HIAKIALKWGIPNTSNELMANE
Sbjct: 446  ELTQLRKLARSLPTHFVLGRNRKLQGLAAAVVKLWEKCHIAKIALKWGIPNTSNELMANE 505

Query: 899  LKCLTGGVLLLRNKFFIILYRGKDFLPSQVASLVAEREVELTRYQLEEEVARFKAIETLP 1078
            LK LTGGVLLLRNKFFIILYRGKDFLPSQVA+LVAEREVELTR QLEEEVARFKAIETLP
Sbjct: 506  LKYLTGGVLLLRNKFFIILYRGKDFLPSQVANLVAEREVELTRCQLEEEVARFKAIETLP 565

Query: 1079 ITTEVSMSSSNVGTLSEFQTIAEPGKEKSEIEAQLVAEKERLGKELRNQEHSLYVLQKKT 1258
            IT EVSMSSS+VGTLSEFQTIAEPGKEKSE+E QL++EKERL KELRNQ+++L++L+KK 
Sbjct: 566  ITMEVSMSSSSVGTLSEFQTIAEPGKEKSEVEVQLMSEKERLEKELRNQQNNLHILKKKI 625

Query: 1259 EKSSIALRKLNAAWRPAKQDEDNEILTQEERRSLRQIGLKMDRSLVLGRRGVFDGVLAGL 1438
            EKSSIAL KLNAAWRPAK+D+D EILTQEERRSLRQIGLKMDRSLVLGRRGVFDGVLAGL
Sbjct: 626  EKSSIALGKLNAAWRPAKEDDDKEILTQEERRSLRQIGLKMDRSLVLGRRGVFDGVLAGL 685

Query: 1439 HQHWKHREVVKVITMQKIFSQVIHTAKFLEAESGGILVSVDKLKEGHAIIIYRGKNYRRP 1618
            HQHWKHREV+KVITMQKIFSQVIHTAK LE ESGGIL+SVDK+KEGHAIIIYRGKNYRRP
Sbjct: 686  HQHWKHREVIKVITMQKIFSQVIHTAKLLETESGGILISVDKIKEGHAIIIYRGKNYRRP 745

Query: 1619 ELVPQNLLNKRQALCRSLEMQRIGSLKFYANQTEQAISDLKFKLVEYTVKIGQM 1780
            ELVPQNLLNKRQALCRSLEMQR+GSLKFYANQTEQAISDLK KLVEYTVKIGQM
Sbjct: 746  ELVPQNLLNKRQALCRSLEMQRLGSLKFYANQTEQAISDLKLKLVEYTVKIGQM 799


>ref|XP_004233710.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Solanum lycopersicum]
          Length = 766

 Score =  937 bits (2423), Expect = 0.0
 Identities = 486/600 (81%), Positives = 512/600 (85%), Gaps = 7/600 (1%)
 Frame = +2

Query: 2    RKNGRKMPWESEERIVYRRMKKEKVLTAAESNLDAMLLERLRGEAARIQKWVKVKKAGVT 181
            RK+G +MPWESEERIVYRRMKKEKV+  AESNLDAMLLERLRGEAARIQKWVKVKKAGVT
Sbjct: 209  RKSGARMPWESEERIVYRRMKKEKVVRTAESNLDAMLLERLRGEAARIQKWVKVKKAGVT 268

Query: 182  RAVVDQIHLVWKNNELAMLKFDLPLCRNMDRAREIIEMKTGGSVVWSKKNALVIYRGCDY 361
            R VVDQI  +WKNNELAMLKFDLPLCRNMDRAR+I+EMKTGG VVW K+NALV+YRG + 
Sbjct: 269  RTVVDQIQFIWKNNELAMLKFDLPLCRNMDRARDIVEMKTGGFVVWMKQNALVVYRGYE- 327

Query: 362  TLRQKDDPELHHDFLCSQQNSSFTENIKETXXXXXXXXXXXXXXXXXXXXXXXXXLAINE 541
                          + S  NS                                  L +NE
Sbjct: 328  --------------MISVGNSE------------------------------EDSLVMNE 343

Query: 542  SLYEREANRLLDDLGPRYVDWWWPKPLPVDADLLPEVIPGFKPPFRLCPPRSRSKLTDDE 721
            SLYEREANRLLDDLGPRYVDWWWPKPLPVDADLLPEV+PGFKPPFRLCPPRSRSKLTDDE
Sbjct: 344  SLYEREANRLLDDLGPRYVDWWWPKPLPVDADLLPEVVPGFKPPFRLCPPRSRSKLTDDE 403

Query: 722  LTHLRKLARSLPTHFVLGRNRKLQGLATAVVKLWEKFHIAKIALKWGIPNTSNELMANEL 901
            LT LRKLARSLPTHFVLGRNRKLQGLA A+VKLWEK HIAKIALKWGIPN SNELMANEL
Sbjct: 404  LTQLRKLARSLPTHFVLGRNRKLQGLAAALVKLWEKCHIAKIALKWGIPNASNELMANEL 463

Query: 902  KCLTGGVLLLRNKFFIILYRGKDFLPSQVASLVAEREVELTRYQLEEEVARFKAIETLPI 1081
            K LTGGVLLLRNKFFIILYRGKDFLPSQVA LVAEREVELTR QLEEEVARFKAIETLPI
Sbjct: 464  KYLTGGVLLLRNKFFIILYRGKDFLPSQVAKLVAEREVELTRCQLEEEVARFKAIETLPI 523

Query: 1082 TTEVSMSSSNVGTLSEFQTIAEPGKEKSEIEAQLVAEKERLGKELRNQEHSLYVLQKKTE 1261
            T E SMSSS VGTLSEFQTIAEPGKEKSE+E QL++EKERL KE+RNQ+ SLY+L+KK E
Sbjct: 524  TMEASMSSSIVGTLSEFQTIAEPGKEKSEVEVQLMSEKERLEKEVRNQQDSLYILKKKIE 583

Query: 1262 KSSIALRKLNAAWRPAKQDEDNEILTQEERRSLRQIGLKMDRSLVLGRRGVFDGVLAGLH 1441
            KSSIAL KLNAAWRPAK+D+D EILTQEERRSLRQIGLKMDRSLVLGRRGVFDGVLAGLH
Sbjct: 584  KSSIALGKLNAAWRPAKEDDDKEILTQEERRSLRQIGLKMDRSLVLGRRGVFDGVLAGLH 643

Query: 1442 QHWKHREVVKVITMQKIFSQVIHTAKFLEAESGGILVSVDKLKEGHAIIIYRGKNYRRPE 1621
            QHWKHREV+KVITMQKIFSQVIHTAK LE ESGGIL+SVDK+KEGHAIIIYRGKNYRRPE
Sbjct: 644  QHWKHREVIKVITMQKIFSQVIHTAKLLETESGGILISVDKIKEGHAIIIYRGKNYRRPE 703

Query: 1622 LVPQNLLNKRQALCRSLEMQRIGSLKFYANQTEQAISDLKFKL-------VEYTVKIGQM 1780
            LVPQNLLNKRQALCRSLEMQR+GSLKFYANQTEQAISDLK KL       VEYTVKIGQM
Sbjct: 704  LVPQNLLNKRQALCRSLEMQRLGSLKFYANQTEQAISDLKLKLVISVSVKVEYTVKIGQM 763


>ref|XP_002280704.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Vitis vinifera]
          Length = 1184

 Score =  740 bits (1911), Expect = 0.0
 Identities = 382/604 (63%), Positives = 458/604 (75%), Gaps = 22/604 (3%)
 Frame = +2

Query: 11   GRKMPWESEERIVYRRMKKEKVLTAAESNLDAMLLERLRGEAARIQKWVKVKKAGVTRAV 190
            G KMPW   E++V+RR KKEKV+TAAE  LD MLLERLRGEA +++KWVKVKKAGVT +V
Sbjct: 173  GGKMPWLKTEKVVFRRTKKEKVVTAAELTLDPMLLERLRGEAVKMRKWVKVKKAGVTESV 232

Query: 191  VDQIHLVWKNNELAMLKFDLPLCRNMDRAREIIEMKTGGSVVWSKKNALVIYRGCDYTLR 370
            VDQIH+VWK++ELAM+KFD+PLCRNMDRAREI+E+KT G V+WSKK+ LV+YRG +Y   
Sbjct: 233  VDQIHMVWKSDELAMVKFDMPLCRNMDRAREILEIKTRGLVIWSKKDTLVVYRGSNYQST 292

Query: 371  QKDDPELHHDFLC---------SQQNSSFTENIKETXXXXXXXXXXXXXXXXXXXXXXXX 523
             K   ++    +          +Q N      I E                         
Sbjct: 293  SKHFQKMRPGLVAGADASNSKLNQSNFEDDLTISEIKFHESTTGEKMGRKDGEEDSSPTG 352

Query: 524  XLA--------INESLYEREANRLLDDLGPRYVDWWWPKPLPVDADLLPEVIPGFKPPFR 679
                       +N SLYEREA+RLLD LGPR++DWW PKPLPVDADLLPEV+PGF+PPFR
Sbjct: 353  IFMEEMVDSQPVNGSLYEREADRLLDGLGPRFIDWWRPKPLPVDADLLPEVLPGFRPPFR 412

Query: 680  LCPPRSRSKLTDDELTHLRKLARSLPTHFVLGRNRKLQGLATAVVKLWEKFHIAKIALKW 859
            L PP++RSKLTDDELT+LRKLA +LPTHFVLGRNRKLQGLA A++KLWEK  I KIA+KW
Sbjct: 413  LSPPQTRSKLTDDELTYLRKLAYALPTHFVLGRNRKLQGLAAAILKLWEKSLIVKIAIKW 472

Query: 860  GIPNTSNELMANELKCLTGGVLLLRNKFFIILYRGKDFLPSQVASLVAEREVELTRYQLE 1039
            GIPNT NE MANELKCLTGGVLLLRNKFFIILYRGKDFLP +VA+L+ ERE+E    Q+ 
Sbjct: 473  GIPNTKNEQMANELKCLTGGVLLLRNKFFIILYRGKDFLPCRVANLIVEREMEFKGCQIR 532

Query: 1040 EEVARFKAIETLPITTEVSMSSSNVGTLSEFQTIAEPGK----EKSEIEAQLVAEKERLG 1207
            EE AR KAIET  +T +   ++S  GTLSEFQ I    +      +EIE +L AEKERL 
Sbjct: 533  EEDARLKAIETSFVTDKPLANTSTTGTLSEFQNIETEFRGLKDGNTEIEVELEAEKERLE 592

Query: 1208 KELRNQEHSLYVLQKKTEKSSIALRKLNAAWRPAKQDEDNEILTQEERRSLRQIGLKMDR 1387
            KEL+ QE +L++L++K E+S+  L KLN+AWRPA  D D E++T+EER   R+IG KMD 
Sbjct: 593  KELKKQERNLFILKRKIERSAKVLAKLNSAWRPADHDADKEMITEEERECFRKIGQKMDS 652

Query: 1388 SLVLGRRGVFDGVLAGLHQHWKHREVVKVITMQKIFSQVIHTAKFLEAESGGILVSVDKL 1567
            SL+LGRRGVFDGV+ GLHQHWKHRE+VKVITMQ+ FSQV++TAK LE+ESGG+LVS+DKL
Sbjct: 653  SLLLGRRGVFDGVIEGLHQHWKHREIVKVITMQRSFSQVLYTAKLLESESGGVLVSIDKL 712

Query: 1568 KEGHAIIIYRGKNYRRP-ELVPQNLLNKRQALCRSLEMQRIGSLKFYANQTEQAISDLKF 1744
            KEGHAIIIYRGKNYRRP +LVP+NLL KR+AL RSLEMQRIGSLKF+A Q +QAISDLK 
Sbjct: 713  KEGHAIIIYRGKNYRRPIKLVPKNLLTKREALNRSLEMQRIGSLKFFAYQRQQAISDLKL 772

Query: 1745 KLVE 1756
            KL +
Sbjct: 773  KLAD 776


>ref|XP_006603054.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X1 [Glycine max]
          Length = 750

 Score =  689 bits (1778), Expect = 0.0
 Identities = 364/603 (60%), Positives = 440/603 (72%), Gaps = 19/603 (3%)
 Frame = +2

Query: 2    RKNGRKMPWESEERIVYRRMKKEKVLTAAESNLDAMLLERLRGEAARIQKWVKVKKAGVT 181
            R  GR MPWE +E+  + ++K+EK +TAAE  LD  LL RLR EAAR++ W+KVKKAGVT
Sbjct: 140  RSKGR-MPWEKDEKFGFVKVKREKAVTAAELTLDKALLRRLRNEAARMRTWIKVKKAGVT 198

Query: 182  RAVVDQIHLVWKNNELAMLKFDLPLCRNMDRAREIIEMKTGGSVVWSKKNALVIYRGCDY 361
            + VVDQI   W+ NELAM+KFD+PLCRNMDRAREI+E KTGG VV SKK+ LV+YRGC++
Sbjct: 199  QDVVDQIKRTWRRNELAMIKFDIPLCRNMDRAREIVETKTGGLVVLSKKDFLVVYRGCNH 258

Query: 362  TLRQKDDPEL---HH-----------DFLCSQQNSSFTENIKETXXXXXXXXXXXXXXXX 499
             L  K  P L   H+           D    + N S +E +                   
Sbjct: 259  QLTTKGSPSLRTNHYEMNRVELATKGDIFRVESNHSSSEMLNWNADHKDSISTGIQDVNC 318

Query: 500  XXXXXXXXXLAINESLYEREANRLLDDLGPRYVDWWWPKPLPVDADLLPEVIPGFKPPFR 679
                       +N SLYERE  RLLD LGPR++DWW  KPLPVDADLLPE +PGF+PPFR
Sbjct: 319  QL---------VNGSLYERETERLLDGLGPRFIDWWMHKPLPVDADLLPEEVPGFQPPFR 369

Query: 680  LCPPRSRSKLTDDELTHLRKLARSLPTHFVLGRNRKLQGLATAVVKLWEKFHIAKIALKW 859
            LCPP S +KLTD ELT+ RKLA+SLPTHFVLGRN+ L+GLA+A++KLWEK  IAKIA+K+
Sbjct: 370  LCPPHSSAKLTDYELTYFRKLAQSLPTHFVLGRNKGLKGLASAILKLWEKSLIAKIAIKY 429

Query: 860  GIPNTSNELMANELKCLTGGVLLLRNKFFIILYRGKDFLPSQVASLVAEREVELTRYQLE 1039
            GIPNT NE+MANELKCLTGGVLLLRNKF+I+LYRG DFLP  VASLV +RE+EL   QL 
Sbjct: 430  GIPNTDNEMMANELKCLTGGVLLLRNKFYILLYRGNDFLPRSVASLVEKRELELKSRQLH 489

Query: 1040 EEVARFKAIETLPITTEVSMSSSNVGTLSEFQTIAEPGKEKSEIEA----QLVAEKERLG 1207
            EEVAR KAI+      EV + +S  GTL+EF+ I    ++   +      QL AE  RL 
Sbjct: 490  EEVARMKAIQAFSPIDEVPLDTSTSGTLTEFRKIQTKLEDTKSVNVDSNIQLEAEICRLE 549

Query: 1208 KELRNQEHSLYVLQKKTEKSSIALRKLNAAWRPAKQDEDNEILTQEERRSLRQIGLKMDR 1387
            KEL+ ++   ++L KK ++S   L KLNAAW P++QD D EI+T EER   R+IGLKM  
Sbjct: 550  KELKEEQRRAFILNKKIKRSERELSKLNAAWTPSEQDTDLEIMTDEERECFRKIGLKMQS 609

Query: 1388 SLVLGRRGVFDGVLAGLHQHWKHREVVKVITMQKIFSQVIHTAKFLEAESGGILVSVDKL 1567
            SL+LGRRG+FDGVL GLHQHWKHREVVKVITMQK+FSQVI+TAK LE ESGGILVSVDKL
Sbjct: 610  SLLLGRRGIFDGVLEGLHQHWKHREVVKVITMQKLFSQVINTAKVLETESGGILVSVDKL 669

Query: 1568 KEGHAIIIYRGKNYRRPEL-VPQNLLNKRQALCRSLEMQRIGSLKFYANQTEQAISDLKF 1744
            KEGHAIIIYRGKNY+RP + + +NLL KR+AL RSLEMQRIGS+KF+A+Q EQAIS+L+ 
Sbjct: 670  KEGHAIIIYRGKNYKRPSIKLAKNLLTKREALRRSLEMQRIGSMKFFAHQREQAISELEV 729

Query: 1745 KLV 1753
            KLV
Sbjct: 730  KLV 732


>gb|EMJ18512.1| hypothetical protein PRUPE_ppa016241mg [Prunus persica]
          Length = 809

 Score =  689 bits (1778), Expect = 0.0
 Identities = 373/605 (61%), Positives = 450/605 (74%), Gaps = 22/605 (3%)
 Frame = +2

Query: 11   GRKMPWESEERIVYRRMKKEKVLTAAESNLDAMLLERLRGEAARIQKWVKVKKAGVTRAV 190
            G KMPWE +ERIV++R+KK++V +AAE +L+  LLERLR EAA+++KWVKVKKAGVT+A+
Sbjct: 210  GGKMPWERDERIVFQRIKKKRVASAAELSLEKELLERLRAEAAKMRKWVKVKKAGVTQAI 269

Query: 191  VDQIHLVWKNNELAMLKFDLPLCRNMDRAREIIEMKTGGSVVWSKKNALVIYRGCDYTLR 370
            VD I  +WK NELAM+KFD+PLCRNM RA+EI+E KTGG VVW KK+ LVIYRGC+Y   
Sbjct: 270  VDDIKFIWKTNELAMVKFDVPLCRNMHRAQEIVETKTGGMVVWGKKDTLVIYRGCNYQSS 329

Query: 371  QKDDPELH------HDFLCS-------QQNSSFTENIKETXXXXXXXXXXXXXXXXXXXX 511
             K  P++        + L S       ++NSS+     E+                    
Sbjct: 330  SKFFPKMRPCSADRQETLSSDHMQPDLEENSSYQYKSFESPVDEKMSRKDAEEDCIQSGT 389

Query: 512  XXXXXLAI---NESLYEREANRLLDDLGPRYVDWWWPKPLPVDADLLPEVIPGFKPPFRL 682
                 ++    + SLYE+EA+RLLD LGPR++DWW  KPLPVDADLLPEV+PGFK P R 
Sbjct: 390  FQETSMSCQPTSRSLYEKEADRLLDGLGPRFIDWWMHKPLPVDADLLPEVVPGFKAPIRR 449

Query: 683  CPPRSRSKLTDDELTHLRKLARSLPTHFVLGRNRKLQGLATAVVKLWEKFHIAKIALKWG 862
            CPP +RSKLTDDELT LRK ARSLPTHFVLGRNRKLQGLA A++KLWEK  IAKIA+K+G
Sbjct: 450  CPPHTRSKLTDDELTFLRKFARSLPTHFVLGRNRKLQGLAAAILKLWEKSLIAKIAVKFG 509

Query: 863  IPNTSNELMANELKCLTGGVLLLRNKFFIILYRGKDFLPSQVASLVAEREVELTRYQLEE 1042
            +PNT+NE MA EL+     VL+LRNKF I+LYRGKDFLP  VA LVA+REVELTR+QL E
Sbjct: 510  VPNTNNEQMAYELRAR---VLILRNKFIILLYRGKDFLPCGVADLVAKREVELTRWQLYE 566

Query: 1043 EVARFKAIETLPITTEVSMSSSNVGTLSEFQTI----AEPGKEKSEIEAQLVAEKERLGK 1210
            E AR KAIET   + E  +++  VGTLSEFQ I     E  KE   +E +L AEKE+L +
Sbjct: 567  EHARQKAIETFCESGEPLVNT--VGTLSEFQDIQTEYGELIKENKNVEIKLEAEKEQLER 624

Query: 1211 ELRNQEHSLYVLQKKTEKSSIALRKLNAAWRPAKQDEDNEILTQEERRSLRQIGLKMDRS 1390
            ELRNQE   ++L KK EKS+  L KLN+   PA+QD D E++T+EE+  LR +GLKM   
Sbjct: 625  ELRNQERKFFILNKKIEKSTNELSKLNSQRTPAEQDVDQEMMTEEEKECLRTVGLKMHSC 684

Query: 1391 LVLGRRGVFDGVLAGLHQHWKHREVVKVITMQKIFSQVIHTAKFLEAESGGILVSVDKLK 1570
            LVLGRRGVF+GV+ GLHQHWKHREVVKVITMQK+F QV+HTAK LEAESGGILVSVDKLK
Sbjct: 685  LVLGRRGVFNGVMEGLHQHWKHREVVKVITMQKLFRQVMHTAKLLEAESGGILVSVDKLK 744

Query: 1571 EGHAIIIYRGKNYRRPELVPQ--NLLNKRQALCRSLEMQRIGSLKFYANQTEQAISDLKF 1744
            EGHAIIIYRGKNYRRP L+P   NLL+KR+AL RSLEMQRIGSLKF+A+Q +QA  DLK 
Sbjct: 745  EGHAIIIYRGKNYRRP-LMPTGGNLLSKRKALHRSLEMQRIGSLKFFASQRQQATLDLKL 803

Query: 1745 KLVEY 1759
            KL  +
Sbjct: 804  KLSHF 808


>ref|XP_006603055.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X2 [Glycine max]
            gi|571550194|ref|XP_006603056.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X3 [Glycine max]
            gi|571550197|ref|XP_006603057.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X4 [Glycine max]
          Length = 747

 Score =  689 bits (1777), Expect = 0.0
 Identities = 364/608 (59%), Positives = 441/608 (72%), Gaps = 19/608 (3%)
 Frame = +2

Query: 2    RKNGRKMPWESEERIVYRRMKKEKVLTAAESNLDAMLLERLRGEAARIQKWVKVKKAGVT 181
            R  GR MPWE +E+  + ++K+EK +TAAE  LD  LL RLR EAAR++ W+KVKKAGVT
Sbjct: 140  RSKGR-MPWEKDEKFGFVKVKREKAVTAAELTLDKALLRRLRNEAARMRTWIKVKKAGVT 198

Query: 182  RAVVDQIHLVWKNNELAMLKFDLPLCRNMDRAREIIEMKTGGSVVWSKKNALVIYRGCDY 361
            + VVDQI   W+ NELAM+KFD+PLCRNMDRAREI+E KTGG VV SKK+ LV+YRGC++
Sbjct: 199  QDVVDQIKRTWRRNELAMIKFDIPLCRNMDRAREIVETKTGGLVVLSKKDFLVVYRGCNH 258

Query: 362  TLRQKDDPEL---HH-----------DFLCSQQNSSFTENIKETXXXXXXXXXXXXXXXX 499
             L  K  P L   H+           D    + N S +E +                   
Sbjct: 259  QLTTKGSPSLRTNHYEMNRVELATKGDIFRVESNHSSSEMLNWNADHKDSISTGIQDVNC 318

Query: 500  XXXXXXXXXLAINESLYEREANRLLDDLGPRYVDWWWPKPLPVDADLLPEVIPGFKPPFR 679
                       +N SLYERE  RLLD LGPR++DWW  KPLPVDADLLPE +PGF+PPFR
Sbjct: 319  QL---------VNGSLYERETERLLDGLGPRFIDWWMHKPLPVDADLLPEEVPGFQPPFR 369

Query: 680  LCPPRSRSKLTDDELTHLRKLARSLPTHFVLGRNRKLQGLATAVVKLWEKFHIAKIALKW 859
            LCPP S +KLTD ELT+ RKLA+SLPTHFVLGRN+ L+GLA+A++KLWEK  IAKIA+K+
Sbjct: 370  LCPPHSSAKLTDYELTYFRKLAQSLPTHFVLGRNKGLKGLASAILKLWEKSLIAKIAIKY 429

Query: 860  GIPNTSNELMANELKCLTGGVLLLRNKFFIILYRGKDFLPSQVASLVAEREVELTRYQLE 1039
            GIPNT NE+MANELKCLTGGVLLLRNKF+I+LYRG DFLP  VASLV +RE+EL   QL 
Sbjct: 430  GIPNTDNEMMANELKCLTGGVLLLRNKFYILLYRGNDFLPRSVASLVEKRELELKSRQLH 489

Query: 1040 EEVARFKAIETLPITTEVSMSSSNVGTLSEFQTIAEPGKEKSEIEA----QLVAEKERLG 1207
            EEVAR KAI+      EV + +S  GTL+EF+ I    ++   +      QL AE  RL 
Sbjct: 490  EEVARMKAIQAFSPIDEVPLDTSTSGTLTEFRKIQTKLEDTKSVNVDSNIQLEAEICRLE 549

Query: 1208 KELRNQEHSLYVLQKKTEKSSIALRKLNAAWRPAKQDEDNEILTQEERRSLRQIGLKMDR 1387
            KEL+ ++   ++L KK ++S   L KLNAAW P++QD D EI+T EER   R+IGLKM  
Sbjct: 550  KELKEEQRRAFILNKKIKRSERELSKLNAAWTPSEQDTDLEIMTDEERECFRKIGLKMQS 609

Query: 1388 SLVLGRRGVFDGVLAGLHQHWKHREVVKVITMQKIFSQVIHTAKFLEAESGGILVSVDKL 1567
            SL+LGRRG+FDGVL GLHQHWKHREVVKVITMQK+FSQVI+TAK LE ESGGILVSVDKL
Sbjct: 610  SLLLGRRGIFDGVLEGLHQHWKHREVVKVITMQKLFSQVINTAKVLETESGGILVSVDKL 669

Query: 1568 KEGHAIIIYRGKNYRRPEL-VPQNLLNKRQALCRSLEMQRIGSLKFYANQTEQAISDLKF 1744
            KEGHAIIIYRGKNY+RP + + +NLL KR+AL RSLEMQRIGS+KF+A+Q EQAIS+L+ 
Sbjct: 670  KEGHAIIIYRGKNYKRPSIKLAKNLLTKREALRRSLEMQRIGSMKFFAHQREQAISELEV 729

Query: 1745 KLVEYTVK 1768
            KL +   K
Sbjct: 730  KLADLQQK 737


>ref|XP_006603058.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X5 [Glycine max]
          Length = 744

 Score =  685 bits (1767), Expect = 0.0
 Identities = 362/602 (60%), Positives = 438/602 (72%), Gaps = 19/602 (3%)
 Frame = +2

Query: 2    RKNGRKMPWESEERIVYRRMKKEKVLTAAESNLDAMLLERLRGEAARIQKWVKVKKAGVT 181
            R  GR MPWE +E+  + ++K+EK +TAAE  LD  LL RLR EAAR++ W+KVKKAGVT
Sbjct: 140  RSKGR-MPWEKDEKFGFVKVKREKAVTAAELTLDKALLRRLRNEAARMRTWIKVKKAGVT 198

Query: 182  RAVVDQIHLVWKNNELAMLKFDLPLCRNMDRAREIIEMKTGGSVVWSKKNALVIYRGCDY 361
            + VVDQI   W+ NELAM+KFD+PLCRNMDRAREI+E KTGG VV SKK+ LV+YRGC++
Sbjct: 199  QDVVDQIKRTWRRNELAMIKFDIPLCRNMDRAREIVETKTGGLVVLSKKDFLVVYRGCNH 258

Query: 362  TLRQKDDPEL---HH-----------DFLCSQQNSSFTENIKETXXXXXXXXXXXXXXXX 499
             L  K  P L   H+           D    + N S +E +                   
Sbjct: 259  QLTTKGSPSLRTNHYEMNRVELATKGDIFRVESNHSSSEMLNWNADHKDSISTGIQDVNC 318

Query: 500  XXXXXXXXXLAINESLYEREANRLLDDLGPRYVDWWWPKPLPVDADLLPEVIPGFKPPFR 679
                       +N SLYERE  RLLD LGPR++DWW  KPLPVDADLLPE +PGF+PPFR
Sbjct: 319  QL---------VNGSLYERETERLLDGLGPRFIDWWMHKPLPVDADLLPEEVPGFQPPFR 369

Query: 680  LCPPRSRSKLTDDELTHLRKLARSLPTHFVLGRNRKLQGLATAVVKLWEKFHIAKIALKW 859
            LCPP S +KLTD ELT+ RKLA+SLPTHFVLGRN+ L+GLA+A++KLWEK  IAKIA+K+
Sbjct: 370  LCPPHSSAKLTDYELTYFRKLAQSLPTHFVLGRNKGLKGLASAILKLWEKSLIAKIAIKY 429

Query: 860  GIPNTSNELMANELKCLTGGVLLLRNKFFIILYRGKDFLPSQVASLVAEREVELTRYQLE 1039
            GIPNT NE+MANELKCLTGGVLLLRNKF+I+LYRG DFLP  VASLV +RE+EL   QL 
Sbjct: 430  GIPNTDNEMMANELKCLTGGVLLLRNKFYILLYRGNDFLPRSVASLVEKRELELKSRQLH 489

Query: 1040 EEVARFKAIETLPITTEVSMSSSNVGTLSEFQTIAEPGKEKSEIEA----QLVAEKERLG 1207
            EEVAR KAI+      EV + +S  GTL+EF+ I    ++   +      QL AE  RL 
Sbjct: 490  EEVARMKAIQAFSPIDEVPLDTSTSGTLTEFRKIQTKLEDTKSVNVDSNIQLEAEICRLE 549

Query: 1208 KELRNQEHSLYVLQKKTEKSSIALRKLNAAWRPAKQDEDNEILTQEERRSLRQIGLKMDR 1387
            KEL+ ++   ++L KK ++S   L KLNAAW P++QD D EI+T EER   R+IGLKM  
Sbjct: 550  KELKEEQRRAFILNKKIKRSERELSKLNAAWTPSEQDTDLEIMTDEERECFRKIGLKMQS 609

Query: 1388 SLVLGRRGVFDGVLAGLHQHWKHREVVKVITMQKIFSQVIHTAKFLEAESGGILVSVDKL 1567
            SL+LGRRG+FDGVL GLHQHWKHREVVKVITMQK+FSQVI+TAK LE ESGGILVSVDKL
Sbjct: 610  SLLLGRRGIFDGVLEGLHQHWKHREVVKVITMQKLFSQVINTAKVLETESGGILVSVDKL 669

Query: 1568 KEGHAIIIYRGKNYRRPEL-VPQNLLNKRQALCRSLEMQRIGSLKFYANQTEQAISDLKF 1744
            KEGHAIIIYRGKNY+RP + + +NLL KR+AL RSLEMQRIGS+KF+A+Q EQAIS+L+ 
Sbjct: 670  KEGHAIIIYRGKNYKRPSIKLAKNLLTKREALRRSLEMQRIGSMKFFAHQREQAISELEA 729

Query: 1745 KL 1750
             L
Sbjct: 730  DL 731


>ref|XP_002516757.1| conserved hypothetical protein [Ricinus communis]
            gi|223544130|gb|EEF45655.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 742

 Score =  684 bits (1765), Expect = 0.0
 Identities = 362/587 (61%), Positives = 440/587 (74%), Gaps = 4/587 (0%)
 Frame = +2

Query: 8    NGRKMPWESEERIVYRRMKKEKVLTAAESNLDAMLLERLRGEAARIQKWVKVKKAGVTRA 187
            N +  PWE EE+ VY R+KKEK +T AE  L+  LLE LR EA++++KWVKV KAGVT++
Sbjct: 168  NKKLKPWEREEKFVYWRIKKEKAVTKAELILEKELLEILRTEASKMRKWVKVMKAGVTQS 227

Query: 188  VVDQIHLVWKNNELAMLKFDLPLCRNMDRAREIIEMKTGGSVVWSKKNALVIYRGCDYTL 367
            VVDQI   W+NNELAM+KFDLPLCRNMDRAREI+E+KTGG VVW++K++LVIYRGC+Y L
Sbjct: 228  VVDQIRYAWRNNELAMVKFDLPLCRNMDRAREIVELKTGGLVVWTRKDSLVIYRGCNYHL 287

Query: 368  RQKDDPELHHDFLCSQQNSSFTENIKETXXXXXXXXXXXXXXXXXXXXXXXXXLAINESL 547
             +        + + S+      E I  +                           IN SL
Sbjct: 288  TKSSHVSTMDEKIGSKDGEE--EYIPTSIFIGDDANTP----------------TINGSL 329

Query: 548  YEREANRLLDDLGPRYVDWWWPKPLPVDADLLPEVIPGFKPPFRLCPPRSRSKLTDDELT 727
            +ERE +RLLD LGPR+VDWW  KPLPVDADLLPEV+ GF PP R     +R+KL DDELT
Sbjct: 330  FERETDRLLDGLGPRFVDWWMRKPLPVDADLLPEVVAGFMPPSRF--HYARAKLKDDELT 387

Query: 728  HLRKLARSLPTHFVLGRNRKLQGLATAVVKLWEKFHIAKIALKWGIPNTSNELMANELKC 907
            +LRKLA +LPTHFVLGRNR+LQGLA A++KLWE+  IAKIA+KWGIPNT NE MANELK 
Sbjct: 388  YLRKLAYALPTHFVLGRNRRLQGLAAAILKLWERSLIAKIAVKWGIPNTDNEQMANELKH 447

Query: 908  LTGGVLLLRNKFFIILYRGKDFLPSQVASLVAEREVELTRYQLEEEVARFKAIETLPITT 1087
            LTGGVLLLRNKFFIIL+RGKDFLP QVA LV +RE EL   QL EE AR KAIET     
Sbjct: 448  LTGGVLLLRNKFFIILFRGKDFLPCQVADLVVKRENELKICQLNEEGARLKAIETSFTDD 507

Query: 1088 EVSMSSSNVGTLSEFQTIAEPGKEKS----EIEAQLVAEKERLGKELRNQEHSLYVLQKK 1255
            E+ + ++ +GTL+EFQ I    KE +    + + QL AEKE+L +ELR QEH L +L+ K
Sbjct: 508  ELVVKATKIGTLNEFQDIQVRFKELAKGYRDSKLQLEAEKEKLERELRIQEHKLLILKSK 567

Query: 1256 TEKSSIALRKLNAAWRPAKQDEDNEILTQEERRSLRQIGLKMDRSLVLGRRGVFDGVLAG 1435
             EKS+  L KLN+AW PA QD D E++T+EER  LR+IGLKM  SL+LGRRGVFDGV+ G
Sbjct: 568  IEKSARELSKLNSAWAPADQDADLEMMTEEERECLRKIGLKMRSSLLLGRRGVFDGVIEG 627

Query: 1436 LHQHWKHREVVKVITMQKIFSQVIHTAKFLEAESGGILVSVDKLKEGHAIIIYRGKNYRR 1615
            LHQHWKHREVVKVI++Q++F+QVI TAKFLEAE+GGILVS+DKLKEGHAIIIYRGKNYRR
Sbjct: 628  LHQHWKHREVVKVISLQRMFAQVIRTAKFLEAETGGILVSIDKLKEGHAIIIYRGKNYRR 687

Query: 1616 PELVPQNLLNKRQALCRSLEMQRIGSLKFYANQTEQAISDLKFKLVE 1756
            P+ +  NLL KR+ALCRSLEMQRIGSL+F+A Q + +I +LKF+L +
Sbjct: 688  PQRLLNNLLTKRKALCRSLEMQRIGSLRFFAYQRQHSIRELKFQLAQ 734


>ref|XP_004507538.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Cicer arietinum]
          Length = 764

 Score =  683 bits (1762), Expect = 0.0
 Identities = 350/601 (58%), Positives = 441/601 (73%), Gaps = 20/601 (3%)
 Frame = +2

Query: 8    NGRKMPWESEERIVYRRMKKEKVLTAAESNLDAMLLERLRGEAARIQKWVKVKKAGVTRA 187
            N  +MPWE +E+I + ++K+EK  +AA+ N+D ++L RLRGEAAR++KWVKVKK GVT+ 
Sbjct: 148  NKGRMPWEKDEKIGFFKVKREKTFSAADLNVDKVVLHRLRGEAARMRKWVKVKKIGVTQD 207

Query: 188  VVDQIHLVWKNNELAMLKFDLPLCRNMDRAREIIEMKTGGSVVWSKKNALVIYRGCDYTL 367
            VVD+I   W+ NELAM+KFD+PLC+NM RAREI+E KTGG V+W KK+ LV+YRGC+Y L
Sbjct: 208  VVDEIKRSWRMNELAMVKFDIPLCQNMGRAREIVETKTGGLVIWCKKDTLVVYRGCNYQL 267

Query: 368  RQKDDPELHHDFLCSQQNSSF-TENIKETXXXXXXXXXXXXXXXXXXXXXXXXXLAINE- 541
              K  P++H  ++ SQ+ +S+ T  +K                            +++  
Sbjct: 268  TSKSSPKIHTGYIRSQKTNSYETNEVKSATKGDLSRVESTQSSSEILSSNAEHKDSLSTD 327

Query: 542  -----------SLYEREANRLLDDLGPRYVDWWWPKPLPVDADLLPEVIPGFKPPFRLCP 688
                       SLYE+E +RLLD LGPR+VDWW  KPLPVDADLLPEV+PGF+PPFRLCP
Sbjct: 328  NYNMNYQPRSGSLYEKECDRLLDGLGPRFVDWWMDKPLPVDADLLPEVVPGFEPPFRLCP 387

Query: 689  PRSRSKLTDDELTHLRKLARSLPTHFVLGRNRKLQGLATAVVKLWEKFHIAKIALKWGIP 868
            P +RSKLTDDELT+ RK++  LPTHFVLGRNR LQGLA A++KLW+K H AKIA+K+G+P
Sbjct: 388  PHARSKLTDDELTYFRKISHPLPTHFVLGRNRGLQGLAAAILKLWQKSHTAKIAIKYGVP 447

Query: 869  NTSNELMANELKCLTGGVLLLRNKFFIILYRGKDFLPSQVASLVAEREVELTRYQLEEEV 1048
            NT NE+MANELK LTGGVLLLRNKF+I+LYRGKDFLP +VA+LV  RE+EL   QL EEV
Sbjct: 448  NTDNEVMANELKRLTGGVLLLRNKFYILLYRGKDFLPRRVAALVERRELELKSCQLHEEV 507

Query: 1049 ARFKAIETLPITTEVSM--SSSNVGTLSEFQTIAEPGKEKSEIEAQ----LVAEKERLGK 1210
            AR KAI+      E+ +   +S  GTL+EF  I    ++  E+       L AE  RL K
Sbjct: 508  ARAKAIQAFSSFDELQLPQEASTSGTLTEFMKIQMKFEDIKEVNVDSNIALEAEIYRLEK 567

Query: 1211 ELRNQEHSLYVLQKKTEKSSIALRKLNAAWRPAKQDEDNEILTQEERRSLRQIGLKMDRS 1390
            EL+ Q+H  ++L KK E+S++ L KLNA W PA +D D EI+T EER   R++GLKM   
Sbjct: 568  ELKEQQHKAFILNKKIERSAMELSKLNAVWTPAGEDIDLEIMTDEERECFRKMGLKMRSC 627

Query: 1391 LVLGRRGVFDGVLAGLHQHWKHREVVKVITMQKIFSQVIHTAKFLEAESGGILVSVDKLK 1570
            LVLGRRG+FDGVL GLHQ+WKHRE+ KVITMQ++ SQVI+T++FLE ESGGILVSVDKLK
Sbjct: 628  LVLGRRGIFDGVLEGLHQYWKHREIAKVITMQRLLSQVIYTSQFLERESGGILVSVDKLK 687

Query: 1571 EGHAIIIYRGKNYRRP-ELVPQNLLNKRQALCRSLEMQRIGSLKFYANQTEQAISDLKFK 1747
            EGHAIIIYRGKNY RP + + +NLL KR+AL RSLEMQRIGSLKF+A Q E+ IS+LK K
Sbjct: 688  EGHAIIIYRGKNYSRPSQKIAKNLLTKRKALRRSLEMQRIGSLKFFAYQREKTISNLKLK 747

Query: 1748 L 1750
            L
Sbjct: 748  L 748


>gb|EXC20503.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Morus
            notabilis]
          Length = 828

 Score =  681 bits (1757), Expect = 0.0
 Identities = 360/607 (59%), Positives = 433/607 (71%), Gaps = 24/607 (3%)
 Frame = +2

Query: 2    RKNGRKMPWESEERIVYRRMKKEKVLTAAESNLDAMLLERLRGEAARIQKWVKVKKAGVT 181
            R  G +MPWE +E  V+RRMKKEK++++AE  L+  LLERLR EA +++KWVKVKKAGVT
Sbjct: 160  RSGGERMPWEKDEGFVFRRMKKEKIVSSAELRLERELLERLRSEARKMRKWVKVKKAGVT 219

Query: 182  RAVVDQIHLVWKNNELAMLKFDLPLCRNMDRAREIIEMKTGGSVVWSKKNALVIYRGCDY 361
            + VV+ +  VWK+NELAM+KFD+PLCRNMDRA+EI+EMKTGG VVW +K+A VIYRGC+Y
Sbjct: 220  KEVVEDVKFVWKSNELAMVKFDVPLCRNMDRAQEILEMKTGGLVVWRRKDAQVIYRGCNY 279

Query: 362  TLRQKDDPELHHDFLCSQQ---------NSSFTENIKETXXXXXXXXXXXXXXXXXXXXX 514
                K  P  +  F   Q+         +S    ++ E                      
Sbjct: 280  QPTSKTFPRTYAGFSGHQETPFSNLVQLDSRKGNSVSEVKSYENTIERKISKKNTEGETI 339

Query: 515  XXXXLAINE-------SLYEREANRLLDDLGPRYVDWWWPKPLPVDADLLPEVIPGFKPP 673
                +  N+       SLY REA+RLLD LGPR++DWW  KPLPVDADLLPEV+PGF+PP
Sbjct: 340  PTAIILKNDANFQPSSSLYVREADRLLDGLGPRFIDWWMNKPLPVDADLLPEVVPGFRPP 399

Query: 674  FRLCPPRSRSKLTDDELTHLRKLARSLPTHFVLGRNRKLQGLATAVVKLWEKFHIAKIAL 853
            FR CPP +RSKLTD+ELT+LRKLA SLPTHFVLGRNRKLQGLA A++KLWEK HIAKIA+
Sbjct: 400  FRRCPPHTRSKLTDEELTYLRKLAHSLPTHFVLGRNRKLQGLAAAILKLWEKCHIAKIAV 459

Query: 854  KWGIPNTSNELMANELK---CLTGGVLLLRNKFFIILYRGKDFLPSQVASLVAEREVELT 1024
            K G+PNT+NE MA ELK   CLTGG LLLRNKF IILYRGKDFLP Q+A L+ +RE EL 
Sbjct: 460  KLGVPNTNNEQMAYELKARICLTGGDLLLRNKFIIILYRGKDFLPDQIAELITKRETELE 519

Query: 1025 RYQLEEEVARFKAIETLPITTEVSMSSSNVGTLSEFQTI----AEPGKEKSEIEAQLVAE 1192
              QL EE AR    E + +  E    +S  GTLSEF  I     +  K   E++    AE
Sbjct: 520  YCQLYEEHARLVVAEKVFVADEPLKKTSPAGTLSEFHDIQIEYGDSNKGNIEVKLPFEAE 579

Query: 1193 KERLGKELRNQEHSLYVLQKKTEKSSIALRKLNAAWRPAKQDEDNEILTQEERRSLRQIG 1372
            KERL  ELR QE  L +L  K +KS+  L KLN AW+P+++D D E+LT+EER   R+IG
Sbjct: 580  KERLESELRKQERKLLILNSKIKKSTKELLKLNTAWKPSERDGDQEMLTEEERECFRKIG 639

Query: 1373 LKMDRSLVLGRRGVFDGVLAGLHQHWKHREVVKVITMQKIFSQVIHTAKFLEAESGGILV 1552
            LKM   LVLGRRG+FDGV+ GL QHWKHREV KVITMQ+ F QV++TA  LEAESGG+LV
Sbjct: 640  LKMRSVLVLGRRGIFDGVIEGLRQHWKHREVAKVITMQRYFWQVMYTATSLEAESGGLLV 699

Query: 1553 SVDKLKEGHAIIIYRGKNYRRP-ELVPQNLLNKRQALCRSLEMQRIGSLKFYANQTEQAI 1729
            SV+KLKEGHAIIIYRGKNYRRP +L+  NLL KR+AL RSLEMQRIGSLKF+A Q  +AI
Sbjct: 700  SVEKLKEGHAIIIYRGKNYRRPLKLISVNLLTKRKALSRSLEMQRIGSLKFFAYQRHRAI 759

Query: 1730 SDLKFKL 1750
            SDLK KL
Sbjct: 760  SDLKLKL 766


>ref|XP_006482225.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X1 [Citrus sinensis]
            gi|568857343|ref|XP_006482226.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X2 [Citrus sinensis]
          Length = 771

 Score =  678 bits (1750), Expect = 0.0
 Identities = 364/598 (60%), Positives = 438/598 (73%), Gaps = 16/598 (2%)
 Frame = +2

Query: 11   GRKMPWESEERIVYRRMKKEKVLTAAESNLDAMLLERLRGEAARIQKWVKVKKAGVTRAV 190
            G K+PW  E+R V+RRMKKE+++T AE+ LD  LLERL+ EA +++KWVKVKKAGVT +V
Sbjct: 152  GGKVPWLREDRFVFRRMKKERMVTKAETMLDGELLERLKDEARKMRKWVKVKKAGVTESV 211

Query: 191  VDQIHLVWKNNELAMLKFDLPLCRNMDRAREIIEMKTGGSVVWSKKNALVIYRG------ 352
            V +I L W+ NELAM+KFD+PLCRNMDRAREI+E+KTGG V+W+KK+A V+YRG      
Sbjct: 212  VFEIRLAWRRNELAMVKFDVPLCRNMDRAREILELKTGGLVIWTKKDAHVVYRGDSSKSS 271

Query: 353  CDYTLRQKDDPELH-----HDFLCSQQNSSFTENIKETXXXXXXXXXXXXXXXXXXXXXX 517
                 R  DD E       H  L  + N S+ ++   T                      
Sbjct: 272  VKMCPRSADDQEAPLSKSTHLHLEKKVNVSWIKSNTATLDQNRSLKDGEENSLPTSIFMD 331

Query: 518  XXXLAINESLYEREANRLLDDLGPRYVDWWWPKPLPVDADLLPEVIPGFKPPFRLCPPRS 697
               L I++SLYERE +RLLD LGPR+VDWW  KPLPVD DLLPEV+PGFKPPFRL PP +
Sbjct: 332  KN-LRIDKSLYEREGDRLLDGLGPRFVDWWMWKPLPVDGDLLPEVVPGFKPPFRLSPPDA 390

Query: 698  RSKLTDDELTHLRKLARSLPTHFVLGRNRKLQGLATAVVKLWEKFHIAKIALKWGIPNTS 877
            RSKLTDDELT+LRKLA  LPTHFVLGRNR LQGLATA++KLWEK  +AKI +KWGIPNT 
Sbjct: 391  RSKLTDDELTYLRKLAHPLPTHFVLGRNRGLQGLATAILKLWEKSLVAKITVKWGIPNTD 450

Query: 878  NELMANELKCLTGGVLLLRNKFFIILYRGKDFLPSQVASLVAEREVELTRYQLEEEVARF 1057
            NE MANELK LTGGVLLLRNKF IILYRG DFLP  V +L+ ERE EL   Q  EE AR 
Sbjct: 451  NEQMANELKHLTGGVLLLRNKFLIILYRGNDFLPCGVENLIVERERELQICQNHEEGARL 510

Query: 1058 KAIETLPITTEVSMSSSNVGTLSEFQTIAEPGKE----KSEIEAQLVAEKERLGKELRNQ 1225
            KAIET  +  E    +S  GTLSEFQ I     +      E E QL AE E L +ELR Q
Sbjct: 511  KAIETFHLPHEPLEKTSKAGTLSEFQNIQSDFGDLKMGNREFELQLEAEIEDLERELRKQ 570

Query: 1226 EHSLYVLQKKTEKSSIALRKLNAAWRPAKQDEDNEILTQEERRSLRQIGLKMDRSLVLGR 1405
            E  L++L  K EKS+  L +LN+AW+P +QD D E++T+EER+ L +IG+KM+ +L+LGR
Sbjct: 571  ERKLFILNIKIEKSAKELSRLNSAWKPREQDPDLEMITEEERQCLHKIGMKMNSNLLLGR 630

Query: 1406 RGVFDGVLAGLHQHWKHREVVKVITMQKIFSQVIHTAKFLEAESGGILVSVDKLKEGHAI 1585
            RGVFDGV+ GLHQHWK+REV +VIT QK+F+QVI+TAK L AESGGIL+SVDKLKEGHAI
Sbjct: 631  RGVFDGVIEGLHQHWKYREVARVITKQKLFAQVIYTAKSLVAESGGILISVDKLKEGHAI 690

Query: 1586 IIYRGKNYRRP-ELVPQNLLNKRQALCRSLEMQRIGSLKFYANQTEQAISDLKFKLVE 1756
            IIYRGKNYRRP +L+ QNLL+KRQAL RSLEMQR+GSLKF+A Q ++ IS+LK KL E
Sbjct: 691  IIYRGKNYRRPLKLMTQNLLSKRQALRRSLEMQRLGSLKFFAYQRQRVISNLKIKLAE 748


>gb|EOY04144.1| maize chloroplast splicing factor CRS1, putative isoform 2 [Theobroma
            cacao]
          Length = 804

 Score =  660 bits (1703), Expect = 0.0
 Identities = 357/603 (59%), Positives = 431/603 (71%), Gaps = 23/603 (3%)
 Frame = +2

Query: 17   KMPW-ESEERIVYRRMKKEKVLTAAESNLDAMLLERLRGEAARIQKWVKVKKAGVTRAVV 193
            KMPW   EE++V+RRMKKEK+LT AE +LD  LLERLR +A R++KW+KV K GVT+AVV
Sbjct: 191  KMPWLREEEKVVFRRMKKEKLLTQAEISLDKDLLERLRRKAMRMRKWIKVMKLGVTKAVV 250

Query: 194  DQIHLVWKNNELAMLKFDLPLCRNMDRAREIIEMKTGGSVVWSKKNALVIYRGCDYTLRQ 373
            D+I L W+ NEL M+KF +PLCRNMDRAREIIEMKT G VVW KK+ALV+YRGC + L  
Sbjct: 251  DEIKLAWRKNELVMVKFGVPLCRNMDRAREIIEMKTRGLVVWGKKDALVVYRGCSHGLTS 310

Query: 374  KDDPELHHDFLCSQQNSSFT-------ENIK---ETXXXXXXXXXXXXXXXXXXXXXXXX 523
            K     +      Q+ SS T        NI    E                         
Sbjct: 311  KISSMKYPRCADGQEISSSTFSHLTSSNNINMSLEKFNGSTLQSGLYREDREKESMPINI 370

Query: 524  XLAINE-------SLYEREANRLLDDLGPRYVDWWWPKPLPVDADLLPEVIPGFKPPFRL 682
             +  +E       SLYERE +RLLD LGPR++DWW  KPLP+DADLLPE +PGF+PP RL
Sbjct: 371  FMKEDENNQPVIGSLYERETDRLLDGLGPRFIDWWMRKPLPIDADLLPEEVPGFRPPLRL 430

Query: 683  CPPRSRSKLTDDELTHLRKLARSLPTHFVLGRNRKLQGLATAVVKLWEKFHIAKIALKWG 862
             PP +R  LTDDEL +LRKL   LP HF LG+NR LQGLA A++KLWEK  IAKIA+KWG
Sbjct: 431  SPPNTRPNLTDDELKYLRKLTHPLPFHFALGKNRNLQGLAAAILKLWEKSLIAKIAIKWG 490

Query: 863  IPNTSNELMANELKCLTGGVLLLRNKFFIILYRGKDFLPSQVASLVAEREVELTRYQLEE 1042
            I NT NE MA ELK LTGGVLL+RNKF +ILYRGKDFLP  VA+LV ERE+ L R QL E
Sbjct: 491  IQNTDNEQMAYELKNLTGGVLLVRNKFLLILYRGKDFLPQGVANLVVEREMALRRCQLNE 550

Query: 1043 EVARFKAIETLPITTEVSMSSSNVGTLSEFQTI----AEPGKEKSEIEAQLVAEKERLGK 1210
            E AR K  ET  +  E    +S VGTLSEF+ I     +  KE SE+E QL A+KE L +
Sbjct: 551  EGARVKVAETCQVADEPLAKTSTVGTLSEFEDIQTRFGDLKKESSELELQLEAQKENLER 610

Query: 1211 ELRNQEHSLYVLQKKTEKSSIALRKLNAAWRPAKQDEDNEILTQEERRSLRQIGLKMDRS 1390
            ELRNQE  L +L  K EKS+  L KL ++ +PA+QD D EI+T+EER  LR+IGLK++  
Sbjct: 611  ELRNQERKLSILNIKIEKSAKELAKLKSSRQPAEQDVDLEIITEEERECLRKIGLKLNSF 670

Query: 1391 LVLGRRGVFDGVLAGLHQHWKHREVVKVITMQKIFSQVIHTAKFLEAESGGILVSVDKLK 1570
            LVLGRRGVF+GV+ G++QHWKHREVVKVITMQ++F++VI+TAKFL AE+GGILVSV+KLK
Sbjct: 671  LVLGRRGVFNGVIEGVYQHWKHREVVKVITMQRVFARVIYTAKFLVAETGGILVSVEKLK 730

Query: 1571 EGHAIIIYRGKNYRRP-ELVPQNLLNKRQALCRSLEMQRIGSLKFYANQTEQAISDLKFK 1747
            EGHA+IIYRGKNYRRP +L+  NLL KR+AL +S+E+QRIGSLKF+A Q  QAI DLK K
Sbjct: 731  EGHALIIYRGKNYRRPLKLMTNNLLTKREALRQSIELQRIGSLKFFAYQRRQAILDLKLK 790

Query: 1748 LVE 1756
            L E
Sbjct: 791  LAE 793


>gb|EOY04143.1| maize chloroplast splicing factor CRS1, putative isoform 1 [Theobroma
            cacao]
          Length = 818

 Score =  660 bits (1703), Expect = 0.0
 Identities = 357/603 (59%), Positives = 431/603 (71%), Gaps = 23/603 (3%)
 Frame = +2

Query: 17   KMPW-ESEERIVYRRMKKEKVLTAAESNLDAMLLERLRGEAARIQKWVKVKKAGVTRAVV 193
            KMPW   EE++V+RRMKKEK+LT AE +LD  LLERLR +A R++KW+KV K GVT+AVV
Sbjct: 191  KMPWLREEEKVVFRRMKKEKLLTQAEISLDKDLLERLRRKAMRMRKWIKVMKLGVTKAVV 250

Query: 194  DQIHLVWKNNELAMLKFDLPLCRNMDRAREIIEMKTGGSVVWSKKNALVIYRGCDYTLRQ 373
            D+I L W+ NEL M+KF +PLCRNMDRAREIIEMKT G VVW KK+ALV+YRGC + L  
Sbjct: 251  DEIKLAWRKNELVMVKFGVPLCRNMDRAREIIEMKTRGLVVWGKKDALVVYRGCSHGLTS 310

Query: 374  KDDPELHHDFLCSQQNSSFT-------ENIK---ETXXXXXXXXXXXXXXXXXXXXXXXX 523
            K     +      Q+ SS T        NI    E                         
Sbjct: 311  KISSMKYPRCADGQEISSSTFSHLTSSNNINMSLEKFNGSTLQSGLYREDREKESMPINI 370

Query: 524  XLAINE-------SLYEREANRLLDDLGPRYVDWWWPKPLPVDADLLPEVIPGFKPPFRL 682
             +  +E       SLYERE +RLLD LGPR++DWW  KPLP+DADLLPE +PGF+PP RL
Sbjct: 371  FMKEDENNQPVIGSLYERETDRLLDGLGPRFIDWWMRKPLPIDADLLPEEVPGFRPPLRL 430

Query: 683  CPPRSRSKLTDDELTHLRKLARSLPTHFVLGRNRKLQGLATAVVKLWEKFHIAKIALKWG 862
             PP +R  LTDDEL +LRKL   LP HF LG+NR LQGLA A++KLWEK  IAKIA+KWG
Sbjct: 431  SPPNTRPNLTDDELKYLRKLTHPLPFHFALGKNRNLQGLAAAILKLWEKSLIAKIAIKWG 490

Query: 863  IPNTSNELMANELKCLTGGVLLLRNKFFIILYRGKDFLPSQVASLVAEREVELTRYQLEE 1042
            I NT NE MA ELK LTGGVLL+RNKF +ILYRGKDFLP  VA+LV ERE+ L R QL E
Sbjct: 491  IQNTDNEQMAYELKNLTGGVLLVRNKFLLILYRGKDFLPQGVANLVVEREMALRRCQLNE 550

Query: 1043 EVARFKAIETLPITTEVSMSSSNVGTLSEFQTI----AEPGKEKSEIEAQLVAEKERLGK 1210
            E AR K  ET  +  E    +S VGTLSEF+ I     +  KE SE+E QL A+KE L +
Sbjct: 551  EGARVKVAETCQVADEPLAKTSTVGTLSEFEDIQTRFGDLKKESSELELQLEAQKENLER 610

Query: 1211 ELRNQEHSLYVLQKKTEKSSIALRKLNAAWRPAKQDEDNEILTQEERRSLRQIGLKMDRS 1390
            ELRNQE  L +L  K EKS+  L KL ++ +PA+QD D EI+T+EER  LR+IGLK++  
Sbjct: 611  ELRNQERKLSILNIKIEKSAKELAKLKSSRQPAEQDVDLEIITEEERECLRKIGLKLNSF 670

Query: 1391 LVLGRRGVFDGVLAGLHQHWKHREVVKVITMQKIFSQVIHTAKFLEAESGGILVSVDKLK 1570
            LVLGRRGVF+GV+ G++QHWKHREVVKVITMQ++F++VI+TAKFL AE+GGILVSV+KLK
Sbjct: 671  LVLGRRGVFNGVIEGVYQHWKHREVVKVITMQRVFARVIYTAKFLVAETGGILVSVEKLK 730

Query: 1571 EGHAIIIYRGKNYRRP-ELVPQNLLNKRQALCRSLEMQRIGSLKFYANQTEQAISDLKFK 1747
            EGHA+IIYRGKNYRRP +L+  NLL KR+AL +S+E+QRIGSLKF+A Q  QAI DLK K
Sbjct: 731  EGHALIIYRGKNYRRPLKLMTNNLLTKREALRQSIELQRIGSLKFFAYQRRQAILDLKLK 790

Query: 1748 LVE 1756
            L E
Sbjct: 791  LAE 793


>gb|EOY04145.1| maize chloroplast splicing factor CRS1, putative isoform 3 [Theobroma
            cacao]
          Length = 788

 Score =  660 bits (1702), Expect = 0.0
 Identities = 357/602 (59%), Positives = 431/602 (71%), Gaps = 23/602 (3%)
 Frame = +2

Query: 17   KMPW-ESEERIVYRRMKKEKVLTAAESNLDAMLLERLRGEAARIQKWVKVKKAGVTRAVV 193
            KMPW   EE++V+RRMKKEK+LT AE +LD  LLERLR +A R++KW+KV K GVT+AVV
Sbjct: 165  KMPWLREEEKVVFRRMKKEKLLTQAEISLDKDLLERLRRKAMRMRKWIKVMKLGVTKAVV 224

Query: 194  DQIHLVWKNNELAMLKFDLPLCRNMDRAREIIEMKTGGSVVWSKKNALVIYRGCDYTLRQ 373
            D+I L W+ NEL M+KF +PLCRNMDRAREIIEMKT G VVW KK+ALV+YRGC + L  
Sbjct: 225  DEIKLAWRKNELVMVKFGVPLCRNMDRAREIIEMKTRGLVVWGKKDALVVYRGCSHGLTS 284

Query: 374  KDDPELHHDFLCSQQNSSFT-------ENIK---ETXXXXXXXXXXXXXXXXXXXXXXXX 523
            K     +      Q+ SS T        NI    E                         
Sbjct: 285  KISSMKYPRCADGQEISSSTFSHLTSSNNINMSLEKFNGSTLQSGLYREDREKESMPINI 344

Query: 524  XLAINE-------SLYEREANRLLDDLGPRYVDWWWPKPLPVDADLLPEVIPGFKPPFRL 682
             +  +E       SLYERE +RLLD LGPR++DWW  KPLP+DADLLPE +PGF+PP RL
Sbjct: 345  FMKEDENNQPVIGSLYERETDRLLDGLGPRFIDWWMRKPLPIDADLLPEEVPGFRPPLRL 404

Query: 683  CPPRSRSKLTDDELTHLRKLARSLPTHFVLGRNRKLQGLATAVVKLWEKFHIAKIALKWG 862
             PP +R  LTDDEL +LRKL   LP HF LG+NR LQGLA A++KLWEK  IAKIA+KWG
Sbjct: 405  SPPNTRPNLTDDELKYLRKLTHPLPFHFALGKNRNLQGLAAAILKLWEKSLIAKIAIKWG 464

Query: 863  IPNTSNELMANELKCLTGGVLLLRNKFFIILYRGKDFLPSQVASLVAEREVELTRYQLEE 1042
            I NT NE MA ELK LTGGVLL+RNKF +ILYRGKDFLP  VA+LV ERE+ L R QL E
Sbjct: 465  IQNTDNEQMAYELKNLTGGVLLVRNKFLLILYRGKDFLPQGVANLVVEREMALRRCQLNE 524

Query: 1043 EVARFKAIETLPITTEVSMSSSNVGTLSEFQTI----AEPGKEKSEIEAQLVAEKERLGK 1210
            E AR K  ET  +  E    +S VGTLSEF+ I     +  KE SE+E QL A+KE L +
Sbjct: 525  EGARVKVAETCQVADEPLAKTSTVGTLSEFEDIQTRFGDLKKESSELELQLEAQKENLER 584

Query: 1211 ELRNQEHSLYVLQKKTEKSSIALRKLNAAWRPAKQDEDNEILTQEERRSLRQIGLKMDRS 1390
            ELRNQE  L +L  K EKS+  L KL ++ +PA+QD D EI+T+EER  LR+IGLK++  
Sbjct: 585  ELRNQERKLSILNIKIEKSAKELAKLKSSRQPAEQDVDLEIITEEERECLRKIGLKLNSF 644

Query: 1391 LVLGRRGVFDGVLAGLHQHWKHREVVKVITMQKIFSQVIHTAKFLEAESGGILVSVDKLK 1570
            LVLGRRGVF+GV+ G++QHWKHREVVKVITMQ++F++VI+TAKFL AE+GGILVSV+KLK
Sbjct: 645  LVLGRRGVFNGVIEGVYQHWKHREVVKVITMQRVFARVIYTAKFLVAETGGILVSVEKLK 704

Query: 1571 EGHAIIIYRGKNYRRP-ELVPQNLLNKRQALCRSLEMQRIGSLKFYANQTEQAISDLKFK 1747
            EGHA+IIYRGKNYRRP +L+  NLL KR+AL +S+E+QRIGSLKF+A Q  QAI DLK K
Sbjct: 705  EGHALIIYRGKNYRRPLKLMTNNLLTKREALRQSIELQRIGSLKFFAYQRRQAILDLKLK 764

Query: 1748 LV 1753
            LV
Sbjct: 765  LV 766


>gb|ESW11169.1| hypothetical protein PHAVU_008G007700g [Phaseolus vulgaris]
          Length = 744

 Score =  659 bits (1699), Expect = 0.0
 Identities = 347/604 (57%), Positives = 430/604 (71%), Gaps = 19/604 (3%)
 Frame = +2

Query: 2    RKNGRKMPWESEERIVYRRMKKEKVLTAAESNLDAMLLERLRGEAARIQKWVKVKKAGVT 181
            R+   +MPWE++ + VY ++K+++ +TAAE  LD +L  RLR EAA ++ W+KVKKAGVT
Sbjct: 136  RRTKGRMPWENDWKFVYEKIKRKRTVTAAELTLDKVLFRRLRNEAATMRTWIKVKKAGVT 195

Query: 182  RAVVDQIHLVWKNNELAMLKFDLPLCRNMDRAREIIEMKTGGSVVWSKKNALVIYRGCDY 361
            + VVDQI   W+ NELAM+KFD+PLCRNM RAREI+E KTGG VV SKK+ LV+Y G ++
Sbjct: 196  QDVVDQIKWTWRRNELAMVKFDIPLCRNMSRAREIVETKTGGLVVLSKKDFLVVYHGGNH 255

Query: 362  TLRQKDDPELHHDF-------------LCS-QQNSSFTENIKETXXXXXXXXXXXXXXXX 499
             L     P L  +              +CS   N S +E +                   
Sbjct: 256  QLTTTGYPSLRTNHSEMSGAELATTGDICSVDSNHSLSEMLN---------FIAEDKDSI 306

Query: 500  XXXXXXXXXLAINESLYEREANRLLDDLGPRYVDWWWPKPLPVDADLLPEVIPGFKPPFR 679
                        N SLYERE +RLLDDLGPR++DWW  KPLPVDADLLPE +PGF+PP R
Sbjct: 307  ATSEQNMNFQTANGSLYERETDRLLDDLGPRFIDWWMAKPLPVDADLLPEDVPGFQPPLR 366

Query: 680  LCPPRSRSKLTDDELTHLRKLARSLPTHFVLGRNRKLQGLATAVVKLWEKFHIAKIALKW 859
            +CPP S +KL+D ELT+ RKLA+ LPTHFVLGRN++L+GLA A++KLWEK  IAKI++K+
Sbjct: 367  ICPPHSCAKLSDYELTYFRKLAQLLPTHFVLGRNKRLKGLAAAILKLWEKSLIAKISIKY 426

Query: 860  GIPNTSNELMANELKCLTGGVLLLRNKFFIILYRGKDFLPSQVASLVAEREVELTRYQLE 1039
            GIPNT NE+MANELK LTGGVLLLRNKF+IILYRG DFLP +VA+LV  RE+EL  ++L 
Sbjct: 427  GIPNTDNEMMANELKYLTGGVLLLRNKFYIILYRGNDFLPKRVATLVENRELELKSFELH 486

Query: 1040 EEVARFKAIETLPITTEVSMSSSNVGTLSEFQTI----AEPGKEKSEIEAQLVAEKERLG 1207
            EEVAR KA+E L    EV   +S  GTL+EF+ I     +  K   E+  QL AE  RL 
Sbjct: 487  EEVARMKALEALSPIDEVPQDTSTSGTLTEFKEIQTKFEDAKKGDIELNLQLEAEICRLE 546

Query: 1208 KELRNQEHSLYVLQKKTEKSSIALRKLNAAWRPAKQDEDNEILTQEERRSLRQIGLKMDR 1387
            KEL+ ++H   +L KK EKS   L KLNAAW P++QD D E++T EER   R+IGLKM  
Sbjct: 547  KELKEEQHRALILNKKMEKSGKELSKLNAAWTPSEQDTDLEMMTDEERECFRKIGLKMQS 606

Query: 1388 SLVLGRRGVFDGVLAGLHQHWKHREVVKVITMQKIFSQVIHTAKFLEAESGGILVSVDKL 1567
             L+LGRRG+FDGVL GLHQHWKHREVVKVITMQK+FSQVI+TAK LE ESGGILVSVD L
Sbjct: 607  FLLLGRRGIFDGVLEGLHQHWKHREVVKVITMQKLFSQVINTAKLLETESGGILVSVDNL 666

Query: 1568 KEGHAIIIYRGKNYRRPEL-VPQNLLNKRQALCRSLEMQRIGSLKFYANQTEQAISDLKF 1744
            K GHAIIIYRGKNY RP + + +NLL KR+AL RSLE+QR GSLKF+A Q EQ++S+L+ 
Sbjct: 667  KRGHAIIIYRGKNYTRPSVKLAKNLLTKRKALRRSLELQRFGSLKFFARQREQSVSELEQ 726

Query: 1745 KLVE 1756
            KL +
Sbjct: 727  KLAD 730


>ref|XP_002306656.2| hypothetical protein POPTR_0005s15420g [Populus trichocarpa]
            gi|550339039|gb|EEE93652.2| hypothetical protein
            POPTR_0005s15420g [Populus trichocarpa]
          Length = 729

 Score =  658 bits (1698), Expect = 0.0
 Identities = 354/597 (59%), Positives = 436/597 (73%), Gaps = 15/597 (2%)
 Frame = +2

Query: 14   RKMPWESEERIVYRRMKKEKVLTAAESNLDAMLLERLRGEAARIQKWVKVKKAGVTRAVV 193
            +K+PW  EER+   RMKKEKV++ AE +LD  LLERLRGEAA+++ WVKVKKAGVT++VV
Sbjct: 157  KKLPWVREERVGNWRMKKEKVVSKAELSLDKELLERLRGEAAKMRTWVKVKKAGVTQSVV 216

Query: 194  DQIHLVWKNNELAMLKFDLPLCRNMDRAREIIEMKTGGSVVWSKKNALVIYRGCDYTLRQ 373
            D+I L W+ +ELAM+KF +PLCRNM+RAR+I+E  TGG VVW++K+  V+YRGC+Y  ++
Sbjct: 217  DEIRLTWRTSELAMIKFYMPLCRNMNRARDIVE--TGGLVVWTRKDIHVVYRGCNYQWKK 274

Query: 374  KDDPELHHDFLCSQQNSSFTENIKETXXXXXXXXXXXXXXXXXXXXXXXXXLAINESLYE 553
              +             ++  EN+                              IN SL+E
Sbjct: 275  NFN------------TATIEENLNTQP--------------------------INGSLFE 296

Query: 554  REANRLLDDLGPRYVDWWWPKPLPVDADLLPEVIPGFKPPFRLCPPRSRSKLTDDELTHL 733
            RE +RLLD LGPR+VDWW  KPLPVDADLLPEV+ GF+ P RLCPPR RSKL DDELT+L
Sbjct: 297  RETDRLLDGLGPRFVDWWMRKPLPVDADLLPEVVKGFRSPSRLCPPRMRSKLKDDELTYL 356

Query: 734  RKLARSLPTHFVLGRNRKLQGLATAVVKLWEKFHIAKIALKWGIPNTSNELMANELKC-- 907
            RKLA+SLPTHFVLGRNR+LQGLA A++KLWEK  IAKIA+KWG+PNT+NE MA+ELK   
Sbjct: 357  RKLAQSLPTHFVLGRNRRLQGLAAAILKLWEKTIIAKIAVKWGVPNTNNEQMADELKAKI 416

Query: 908  ----------LTGGVLLLRNKFFIILYRGKDFLPSQVASLVAEREVELTRYQLEEEVARF 1057
                      LTGGVLLLRNKFFIILYRGKDFLP QVA+++ +RE+ L + Q  EE AR 
Sbjct: 417  FLMLMLYTQSLTGGVLLLRNKFFIILYRGKDFLPGQVANVIVDREIALRKCQTNEEGARM 476

Query: 1058 KAIETLPITTEVSMSSSNVGTLSEFQT--IAEPGKEKSEIEAQLVAEKERLGKELRNQEH 1231
            KAIET  +    + ++S  GTL EFQ   I      K + E QL A KE+L +ELRNQE+
Sbjct: 477  KAIETSYMPGGPT-NTSRCGTLYEFQEFQIKFQKTAKGDSEIQLEAYKEKLERELRNQEY 535

Query: 1232 SLYVLQKKTEKSSIALRKLNAAWRPAKQDEDNEILTQEERRSLRQIGLKMDRSLVLGRRG 1411
             L +L+ K EK +  L KLN+AW P+ +D D  I+T+EER   R+IGLK+  SLVLGRRG
Sbjct: 536  RLRILKSKIEKPARDLSKLNSAWVPSPRDADQGIMTEEERECFRKIGLKLRGSLVLGRRG 595

Query: 1412 VFDGVLAGLHQHWKHREVVKVITMQKIFSQVIHTAKFLEAESGGILVSVDKLKEGHAIII 1591
            VF+GV+ GLHQHWKHREVVKVITMQ++FSQVIHTA  LEAES GILVSVDKLKEGHAIII
Sbjct: 596  VFEGVMEGLHQHWKHREVVKVITMQRVFSQVIHTATLLEAESDGILVSVDKLKEGHAIII 655

Query: 1592 YRGKNYRRP-ELVPQNLLNKRQALCRSLEMQRIGSLKFYANQTEQAISDLKFKLVEY 1759
            YRGKNY+RP  L+ +NLL KR+AL RSL +QR+GSLK++ANQ E+ ISDLK KLV +
Sbjct: 656  YRGKNYKRPLRLLKKNLLTKREALKRSLLIQRVGSLKYFANQRERVISDLKLKLVYF 712


>gb|EOY04146.1| maize chloroplast splicing factor CRS1, putative isoform 4 [Theobroma
            cacao]
          Length = 767

 Score =  658 bits (1698), Expect = 0.0
 Identities = 356/601 (59%), Positives = 430/601 (71%), Gaps = 23/601 (3%)
 Frame = +2

Query: 17   KMPW-ESEERIVYRRMKKEKVLTAAESNLDAMLLERLRGEAARIQKWVKVKKAGVTRAVV 193
            KMPW   EE++V+RRMKKEK+LT AE +LD  LLERLR +A R++KW+KV K GVT+AVV
Sbjct: 165  KMPWLREEEKVVFRRMKKEKLLTQAEISLDKDLLERLRRKAMRMRKWIKVMKLGVTKAVV 224

Query: 194  DQIHLVWKNNELAMLKFDLPLCRNMDRAREIIEMKTGGSVVWSKKNALVIYRGCDYTLRQ 373
            D+I L W+ NEL M+KF +PLCRNMDRAREIIEMKT G VVW KK+ALV+YRGC + L  
Sbjct: 225  DEIKLAWRKNELVMVKFGVPLCRNMDRAREIIEMKTRGLVVWGKKDALVVYRGCSHGLTS 284

Query: 374  KDDPELHHDFLCSQQNSSFT-------ENIK---ETXXXXXXXXXXXXXXXXXXXXXXXX 523
            K     +      Q+ SS T        NI    E                         
Sbjct: 285  KISSMKYPRCADGQEISSSTFSHLTSSNNINMSLEKFNGSTLQSGLYREDREKESMPINI 344

Query: 524  XLAINE-------SLYEREANRLLDDLGPRYVDWWWPKPLPVDADLLPEVIPGFKPPFRL 682
             +  +E       SLYERE +RLLD LGPR++DWW  KPLP+DADLLPE +PGF+PP RL
Sbjct: 345  FMKEDENNQPVIGSLYERETDRLLDGLGPRFIDWWMRKPLPIDADLLPEEVPGFRPPLRL 404

Query: 683  CPPRSRSKLTDDELTHLRKLARSLPTHFVLGRNRKLQGLATAVVKLWEKFHIAKIALKWG 862
             PP +R  LTDDEL +LRKL   LP HF LG+NR LQGLA A++KLWEK  IAKIA+KWG
Sbjct: 405  SPPNTRPNLTDDELKYLRKLTHPLPFHFALGKNRNLQGLAAAILKLWEKSLIAKIAIKWG 464

Query: 863  IPNTSNELMANELKCLTGGVLLLRNKFFIILYRGKDFLPSQVASLVAEREVELTRYQLEE 1042
            I NT NE MA ELK LTGGVLL+RNKF +ILYRGKDFLP  VA+LV ERE+ L R QL E
Sbjct: 465  IQNTDNEQMAYELKNLTGGVLLVRNKFLLILYRGKDFLPQGVANLVVEREMALRRCQLNE 524

Query: 1043 EVARFKAIETLPITTEVSMSSSNVGTLSEFQTI----AEPGKEKSEIEAQLVAEKERLGK 1210
            E AR K  ET  +  E    +S VGTLSEF+ I     +  KE SE+E QL A+KE L +
Sbjct: 525  EGARVKVAETCQVADEPLAKTSTVGTLSEFEDIQTRFGDLKKESSELELQLEAQKENLER 584

Query: 1211 ELRNQEHSLYVLQKKTEKSSIALRKLNAAWRPAKQDEDNEILTQEERRSLRQIGLKMDRS 1390
            ELRNQE  L +L  K EKS+  L KL ++ +PA+QD D EI+T+EER  LR+IGLK++  
Sbjct: 585  ELRNQERKLSILNIKIEKSAKELAKLKSSRQPAEQDVDLEIITEEERECLRKIGLKLNSF 644

Query: 1391 LVLGRRGVFDGVLAGLHQHWKHREVVKVITMQKIFSQVIHTAKFLEAESGGILVSVDKLK 1570
            LVLGRRGVF+GV+ G++QHWKHREVVKVITMQ++F++VI+TAKFL AE+GGILVSV+KLK
Sbjct: 645  LVLGRRGVFNGVIEGVYQHWKHREVVKVITMQRVFARVIYTAKFLVAETGGILVSVEKLK 704

Query: 1571 EGHAIIIYRGKNYRRP-ELVPQNLLNKRQALCRSLEMQRIGSLKFYANQTEQAISDLKFK 1747
            EGHA+IIYRGKNYRRP +L+  NLL KR+AL +S+E+QRIGSLKF+A Q  QAI DLK K
Sbjct: 705  EGHALIIYRGKNYRRPLKLMTNNLLTKREALRQSIELQRIGSLKFFAYQRRQAILDLKLK 764

Query: 1748 L 1750
            L
Sbjct: 765  L 765


>ref|XP_002329296.1| predicted protein [Populus trichocarpa]
          Length = 687

 Score =  658 bits (1698), Expect = 0.0
 Identities = 354/597 (59%), Positives = 436/597 (73%), Gaps = 15/597 (2%)
 Frame = +2

Query: 14   RKMPWESEERIVYRRMKKEKVLTAAESNLDAMLLERLRGEAARIQKWVKVKKAGVTRAVV 193
            +K+PW  EER+   RMKKEKV++ AE +LD  LLERLRGEAA+++ WVKVKKAGVT++VV
Sbjct: 115  KKLPWVREERVGNWRMKKEKVVSKAELSLDKELLERLRGEAAKMRTWVKVKKAGVTQSVV 174

Query: 194  DQIHLVWKNNELAMLKFDLPLCRNMDRAREIIEMKTGGSVVWSKKNALVIYRGCDYTLRQ 373
            D+I L W+ +ELAM+KF +PLCRNM+RAR+I+E  TGG VVW++K+  V+YRGC+Y  ++
Sbjct: 175  DEIRLTWRTSELAMIKFYMPLCRNMNRARDIVE--TGGLVVWTRKDIHVVYRGCNYQWKK 232

Query: 374  KDDPELHHDFLCSQQNSSFTENIKETXXXXXXXXXXXXXXXXXXXXXXXXXLAINESLYE 553
              +             ++  EN+                              IN SL+E
Sbjct: 233  NFN------------TATIEENLNTQP--------------------------INGSLFE 254

Query: 554  REANRLLDDLGPRYVDWWWPKPLPVDADLLPEVIPGFKPPFRLCPPRSRSKLTDDELTHL 733
            RE +RLLD LGPR+VDWW  KPLPVDADLLPEV+ GF+ P RLCPPR RSKL DDELT+L
Sbjct: 255  RETDRLLDGLGPRFVDWWMRKPLPVDADLLPEVVKGFRSPSRLCPPRMRSKLKDDELTYL 314

Query: 734  RKLARSLPTHFVLGRNRKLQGLATAVVKLWEKFHIAKIALKWGIPNTSNELMANELKC-- 907
            RKLA+SLPTHFVLGRNR+LQGLA A++KLWEK  IAKIA+KWG+PNT+NE MA+ELK   
Sbjct: 315  RKLAQSLPTHFVLGRNRRLQGLAAAILKLWEKTIIAKIAVKWGVPNTNNEQMADELKAKI 374

Query: 908  ----------LTGGVLLLRNKFFIILYRGKDFLPSQVASLVAEREVELTRYQLEEEVARF 1057
                      LTGGVLLLRNKFFIILYRGKDFLP QVA+++ +RE+ L + Q  EE AR 
Sbjct: 375  FLMLMLYTQSLTGGVLLLRNKFFIILYRGKDFLPGQVANVIVDREIALRKCQTNEEGARM 434

Query: 1058 KAIETLPITTEVSMSSSNVGTLSEFQT--IAEPGKEKSEIEAQLVAEKERLGKELRNQEH 1231
            KAIET  +    + ++S  GTL EFQ   I      K + E QL A KE+L +ELRNQE+
Sbjct: 435  KAIETSYMPGGPT-NTSRCGTLYEFQEFQIKFQKTAKGDSEIQLEAYKEKLERELRNQEY 493

Query: 1232 SLYVLQKKTEKSSIALRKLNAAWRPAKQDEDNEILTQEERRSLRQIGLKMDRSLVLGRRG 1411
             L +L+ K EK +  L KLN+AW P+ +D D  I+T+EER   R+IGLK+  SLVLGRRG
Sbjct: 494  RLRILKSKIEKPAKDLSKLNSAWVPSPRDADQGIMTEEERECFRKIGLKLRGSLVLGRRG 553

Query: 1412 VFDGVLAGLHQHWKHREVVKVITMQKIFSQVIHTAKFLEAESGGILVSVDKLKEGHAIII 1591
            VF+GV+ GLHQHWKHREVVKVITMQ++FSQVIHTA  LEAES GILVSVDKLKEGHAIII
Sbjct: 554  VFEGVMEGLHQHWKHREVVKVITMQRVFSQVIHTATLLEAESDGILVSVDKLKEGHAIII 613

Query: 1592 YRGKNYRRP-ELVPQNLLNKRQALCRSLEMQRIGSLKFYANQTEQAISDLKFKLVEY 1759
            YRGKNY+RP  L+ +NLL KR+AL RSL +QR+GSLK++ANQ E+ ISDLK KLV +
Sbjct: 614  YRGKNYKRPLRLLKKNLLTKREALKRSLLIQRVGSLKYFANQRERVISDLKLKLVYF 670


>ref|XP_004138635.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Cucumis sativus]
          Length = 760

 Score =  655 bits (1689), Expect = 0.0
 Identities = 353/602 (58%), Positives = 425/602 (70%), Gaps = 23/602 (3%)
 Frame = +2

Query: 14   RKMPWESEER-IVYRRMKKEKVLTAAESNLDAMLLERLRGEAARIQKWVKVKKAGVTRAV 190
            R+MPWE ++  IV RRMKK K +T+AE NLD +LLERL+GEA++++KWVKV K GVT+ V
Sbjct: 161  RRMPWEKDDDGIVLRRMKK-KTVTSAELNLDRVLLERLKGEASKMEKWVKVNKVGVTQDV 219

Query: 191  VDQIHLVWKNNELAMLKFDLPLCRNMDRAREIIEMKTGGSVVWSKKNALVIYRGCDYTLR 370
            V+QI  +W+ NELAMLKFD+PL RNMDRAREI+EMKTGG VVWSKKNALV+YRGC+Y L 
Sbjct: 220  VNQIQFMWERNELAMLKFDVPLSRNMDRAREIVEMKTGGMVVWSKKNALVVYRGCNYPLN 279

Query: 371  QKDDP--ELH-------------HDFLCSQQNSSFTENIKETXXXXXXXXXXXXXXXXXX 505
             K     ++H             H  L     S    +I +                   
Sbjct: 280  LKHSTKKQVHISPQNPVKVETDTHFSLSGHYESGLNRSINDNDGEWEEASSFFLIRHENL 339

Query: 506  XXXXXXXLAINESLYEREANRLLDDLGPRYVDWWWPKPLPVDADLLPEVIPGFKPPFRLC 685
                     ++ SLYERE +RLLDDLGPR++DWW  KPLPVDAD+LPEV+PG+ PPFR C
Sbjct: 340  QP-------LSGSLYERETDRLLDDLGPRFIDWWMHKPLPVDADMLPEVVPGYMPPFRRC 392

Query: 686  PPRSRSKLTDDELTHLRKLARSLPTHFVLGRNRKLQGLATAVVKLWEKFHIAKIALKWGI 865
            PP ++  LTD  L HLRKLA SLPTHFVLGRNRKLQGLA +++KLWEK  IAKIALKWG+
Sbjct: 393  PPYTKQNLTDAGLQHLRKLAHSLPTHFVLGRNRKLQGLAASILKLWEKSMIAKIALKWGV 452

Query: 866  PNTSNELMANELKCLTGGVLLLRNKFFIILYRGKDFLPSQVASLVAEREVELTRYQLEEE 1045
            PNT NE MA ELK LTGG LLLRNKF IILYRG DFLP  VA  + +REVEL R+QL EE
Sbjct: 453  PNTDNEQMALELKNLTGGTLLLRNKFVIILYRGNDFLPVGVADSIIQREVELQRWQLHEE 512

Query: 1046 VARFKAIETLPITTEVSMSSSNVGTLSEFQTIA------EPGKEKSEIEAQLVAEKERLG 1207
             +R KA E     TE        GTLS+F+ I         G  +S ++A+  AEK ++ 
Sbjct: 513  NSRLKASEFFCFDTENMEERGKAGTLSDFKDITVGYEDLSTGSTESRLQAE--AEKGKII 570

Query: 1208 KELRNQEHSLYVLQKKTEKSSIALRKLNAAWRPAKQDEDNEILTQEERRSLRQIGLKMDR 1387
            + LR QE  L +L  K EKS+  L KLNA+WR  + D D E++T EER   R++GLKMD 
Sbjct: 571  RGLRMQERRLKILNFKVEKSTKELTKLNASWRRVEPDADQELITNEERICFRKMGLKMDS 630

Query: 1388 SLVLGRRGVFDGVLAGLHQHWKHREVVKVITMQKIFSQVIHTAKFLEAESGGILVSVDKL 1567
             L LGRRGVFDGV+ GLHQHWKHREVVKVITMQ+ F+QV +TAK LEAESGGILVSVDKL
Sbjct: 631  CLTLGRRGVFDGVIEGLHQHWKHREVVKVITMQRAFNQVNYTAKLLEAESGGILVSVDKL 690

Query: 1568 KEGHAIIIYRGKNYRRP-ELVPQNLLNKRQALCRSLEMQRIGSLKFYANQTEQAISDLKF 1744
            KEG+AIII+RGKNY+RP   V +NLL KR+AL RSLEMQRIGSLKF+ANQ +Q I +L+ 
Sbjct: 691  KEGYAIIIFRGKNYKRPLHSVSKNLLTKRKALSRSLEMQRIGSLKFFANQRQQKIYELQH 750

Query: 1745 KL 1750
            +L
Sbjct: 751  EL 752


>ref|XP_004158502.1| PREDICTED: LOW QUALITY PROTEIN: chloroplastic group IIA intron
            splicing facilitator CRS1, chloroplastic-like [Cucumis
            sativus]
          Length = 760

 Score =  652 bits (1683), Expect = 0.0
 Identities = 353/602 (58%), Positives = 424/602 (70%), Gaps = 23/602 (3%)
 Frame = +2

Query: 14   RKMPWESEER-IVYRRMKKEKVLTAAESNLDAMLLERLRGEAARIQKWVKVKKAGVTRAV 190
            R+MPWE ++  IV RRMKK K +T+AE NLD +LLERL+GEA++++KWVKV K GVT+ V
Sbjct: 161  RRMPWEKDDDGIVLRRMKK-KTVTSAELNLDRVLLERLKGEASKMEKWVKVNKVGVTQDV 219

Query: 191  VDQIHLVWKNNELAMLKFDLPLCRNMDRAREIIEMKTGGSVVWSKKNALVIYRGCDYTLR 370
            V+QI  +W+ NELAMLKFD+PL RNMDRAREI+EMKTGG VVWSKKNALVIYRGC+Y L 
Sbjct: 220  VNQIQFMWERNELAMLKFDVPLSRNMDRAREIVEMKTGGMVVWSKKNALVIYRGCNYPLN 279

Query: 371  QKDDP--ELH-------------HDFLCSQQNSSFTENIKETXXXXXXXXXXXXXXXXXX 505
             K     ++H             H  L     S    +I +                   
Sbjct: 280  LKHSTKKQVHISPQNPVKVETDTHFSLSGHYESGLNRSINDNDGEWEEASSFFLIRHENL 339

Query: 506  XXXXXXXLAINESLYEREANRLLDDLGPRYVDWWWPKPLPVDADLLPEVIPGFKPPFRLC 685
                     ++ SLYERE +RLLDDLGPR++DWW  KPLPVDAD+L EV+PG+ PPFR C
Sbjct: 340  QP-------LSGSLYERETDRLLDDLGPRFIDWWMHKPLPVDADMLQEVVPGYMPPFRRC 392

Query: 686  PPRSRSKLTDDELTHLRKLARSLPTHFVLGRNRKLQGLATAVVKLWEKFHIAKIALKWGI 865
            PP ++  LTD  L HLRKLA SLPTHFVLGRNRKLQGLA +++KLWEK  IAKIALKWG+
Sbjct: 393  PPYTKQNLTDAGLQHLRKLAHSLPTHFVLGRNRKLQGLAASILKLWEKSMIAKIALKWGV 452

Query: 866  PNTSNELMANELKCLTGGVLLLRNKFFIILYRGKDFLPSQVASLVAEREVELTRYQLEEE 1045
            PNT NE MA ELK LTGG LLLRNKF IILYRG DFLP  VA  + +REVEL R+QL EE
Sbjct: 453  PNTDNEQMALELKNLTGGTLLLRNKFVIILYRGNDFLPVGVADSIIQREVELQRWQLHEE 512

Query: 1046 VARFKAIETLPITTEVSMSSSNVGTLSEFQTIA------EPGKEKSEIEAQLVAEKERLG 1207
             +R KA E     TE        GTLS+F+ I         G  +S ++A+  AEK ++ 
Sbjct: 513  NSRLKASEFFCFDTENMEERGKAGTLSDFKDITVGYEDLSTGSTESRLQAE--AEKXKII 570

Query: 1208 KELRNQEHSLYVLQKKTEKSSIALRKLNAAWRPAKQDEDNEILTQEERRSLRQIGLKMDR 1387
            + LR QE  L +L  K EKS+  L KLNA+WR  + D D E++T EER   R++GLKMD 
Sbjct: 571  RGLRMQERRLKILNFKVEKSTKELTKLNASWRRVEPDADQELITNEERICFRKMGLKMDS 630

Query: 1388 SLVLGRRGVFDGVLAGLHQHWKHREVVKVITMQKIFSQVIHTAKFLEAESGGILVSVDKL 1567
             L LGRRGVFDGV+ GLHQHWKHREVVKVITMQ+ F+QV +TAK LEAESGGILVSVDKL
Sbjct: 631  CLTLGRRGVFDGVIEGLHQHWKHREVVKVITMQRAFNQVNYTAKLLEAESGGILVSVDKL 690

Query: 1568 KEGHAIIIYRGKNYRRP-ELVPQNLLNKRQALCRSLEMQRIGSLKFYANQTEQAISDLKF 1744
            KEG+AIII+RGKNY+RP   V +NLL KR+AL RSLEMQRIGSLKF+ANQ +Q I +L+ 
Sbjct: 691  KEGYAIIIFRGKNYKRPLHSVSKNLLTKRKALSRSLEMQRIGSLKFFANQRQQKIYELQH 750

Query: 1745 KL 1750
            +L
Sbjct: 751  EL 752