BLASTX nr result

ID: Atropa21_contig00000756 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00000756
         (1355 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001275346.1| transcription factor MYB1R1 [Solanum tuberos...   144   7e-32
ref|XP_004241521.1| PREDICTED: transcription factor MYB1R1-like ...   137   8e-30
gb|EXB29768.1| Transcription factor [Morus notabilis]                  60   2e-06
ref|XP_006344987.1| PREDICTED: transcription factor MYB1R1-like ...    60   2e-06

>ref|NP_001275346.1| transcription factor MYB1R1 [Solanum tuberosum]
           gi|122232932|sp|Q2V9B0.1|MY1R1_SOLTU RecName:
           Full=Transcription factor MYB1R1; AltName:
           Full=Myb-related protein R1; Short=StMYB1R-1
           gi|82621140|gb|ABB86258.1| putative DNA binding
           protein-like [Solanum tuberosum]
          Length = 297

 Score =  144 bits (364), Expect = 7e-32
 Identities = 84/145 (57%), Positives = 90/145 (62%)
 Frame = -1

Query: 752 FSFHDKQVSVMPIEEGGNNQEISVVXXXXXXXXXXXXXXXXXPVAPAVGPIMLPVQIDKS 573
           F      VSVMPIEE  N QEI VV                  VAP VGPI+ PVQIDKS
Sbjct: 157 FDITTDSVSVMPIEEVENKQEIPVVAPATLPTTKTNAFP----VAPTVGPIIFPVQIDKS 212

Query: 572 RESPILFQRDQGNSSMPARSLPMFSMPDPSTVIDLNANQNLTIEPXXXXXXXXXXLDQGQ 393
           RE P L + D GNSSM    +PMFSMP+PST IDLNAN N TIEP          LDQGQ
Sbjct: 213 REYPTLLRHDHGNSSMLVGPVPMFSMPNPSTAIDLNANHNSTIEPSSLSLRLSLSLDQGQ 272

Query: 392 ASSSRHPAFKAMSSFSNGESIIRVA 318
           ASS+RH A+  MSSFSNGESIIRVA
Sbjct: 273 ASSTRHSAYNVMSSFSNGESIIRVA 297


>ref|XP_004241521.1| PREDICTED: transcription factor MYB1R1-like [Solanum lycopersicum]
           gi|62733650|gb|AAX95766.1| Putative DNA binding protein,
           identical [Solanum lycopersicum]
          Length = 302

 Score =  137 bits (346), Expect = 8e-30
 Identities = 80/145 (55%), Positives = 89/145 (61%)
 Frame = -1

Query: 752 FSFHDKQVSVMPIEEGGNNQEISVVXXXXXXXXXXXXXXXXXPVAPAVGPIMLPVQIDKS 573
           F      VSVMPIEE  N QEI V                   VAPAV PI+ PVQ++KS
Sbjct: 159 FDITTDSVSVMPIEEVENKQEIPV-PAPATLPPVETTKTNAFSVAPAVAPIIFPVQVNKS 217

Query: 572 RESPILFQRDQGNSSMPARSLPMFSMPDPSTVIDLNANQNLTIEPXXXXXXXXXXLDQGQ 393
           RE+P LF+ D  NSSM    +PMFSMP+PS  IDLNAN N TIEP          LDQGQ
Sbjct: 218 RENPTLFRHDHANSSMLVGPVPMFSMPNPSKSIDLNANHNSTIEPSSLSLRLSLSLDQGQ 277

Query: 392 ASSSRHPAFKAMSSFSNGESIIRVA 318
           ASS+RH A+  MSSFSNGESIIRVA
Sbjct: 278 ASSTRHSAYNVMSSFSNGESIIRVA 302


>gb|EXB29768.1| Transcription factor [Morus notabilis]
          Length = 316

 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 35/100 (35%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
 Frame = -1

Query: 611 VGPIMLPVQIDKSRESPILFQRDQGNSSMP--ARSLPMFSMPDPSTVIDLNANQNLTIEP 438
           VG  +LP  ++   E   L Q +   +S P   R + + S+P  +   DL+ N    I+P
Sbjct: 217 VGSSVLPTPVENPMEKLTLGQTNPETTSSPKLVRPIALLSIPHGTATADLSLNLKSAIDP 276

Query: 437 XXXXXXXXXXLDQGQASSSRHPAFKAMSSFSNGESIIRVA 318
                      D  ++SS+RH AF++MSSF+NG+SII VA
Sbjct: 277 SALSLKLSLPSDPRESSSARHSAFQSMSSFNNGDSIITVA 316


>ref|XP_006344987.1| PREDICTED: transcription factor MYB1R1-like [Solanum tuberosum]
          Length = 314

 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 50/151 (33%), Positives = 69/151 (45%), Gaps = 6/151 (3%)
 Frame = -1

Query: 752 FSFHDKQVSVMPIEEGGNNQEISVVXXXXXXXXXXXXXXXXXPVAPAVGPIMLPVQIDKS 573
           F      VSV+P EE  N Q+ S+                   +    GP+MLP +I+K 
Sbjct: 171 FDITTDSVSVLPTEETKNRQQHSI-PSLRHVESSKMNAFQVTSMPVNFGPVMLPAEIEK- 228

Query: 572 RESPILFQRDQ-----GNSSMPARSLPMF-SMPDPSTVIDLNANQNLTIEPXXXXXXXXX 411
              PIL Q  Q     G+SS+  R  P+   + + S + D N NQ+  +E          
Sbjct: 229 ---PILRQGSQSYYYNGSSSIFLRPAPVVVPISNSSRIADFNLNQSSAMETSSLSLTLSL 285

Query: 410 XLDQGQASSSRHPAFKAMSSFSNGESIIRVA 318
                 +SS+RH  F+ MSSF+NGESII VA
Sbjct: 286 --SSPSSSSTRHSGFQVMSSFNNGESIISVA 314


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