BLASTX nr result

ID: Atropa21_contig00000755 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00000755
         (727 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004241521.1| PREDICTED: transcription factor MYB1R1-like ...   147   3e-33
ref|NP_001275346.1| transcription factor MYB1R1 [Solanum tuberos...   147   3e-33

>ref|XP_004241521.1| PREDICTED: transcription factor MYB1R1-like [Solanum lycopersicum]
           gi|62733650|gb|AAX95766.1| Putative DNA binding protein,
           identical [Solanum lycopersicum]
          Length = 302

 Score =  147 bits (372), Expect = 3e-33
 Identities = 76/119 (63%), Positives = 84/119 (70%)
 Frame = -1

Query: 727 KNNQEISVVAPAASPTAETTKTNALPMAPAVGPIMLPAQIDKSRESPTLFQRDQANSPML 548
           +N QEI V APA  P  ETTKTNA  +APAV PI+ P Q++KSRE+PTLF+ D ANS ML
Sbjct: 175 ENKQEIPVPAPATLPPVETTKTNAFSVAPAVAPIIFPVQVNKSRENPTLFRHDHANSSML 234

Query: 547 VRPVPMFSMPNPKTVIDLNTNQNSTIEPXXXXXXXXXXLDQGQASSTRHPTFKVMSSIS 371
           V PVPMFSMPNP   IDLN N NSTIEP          LDQGQASSTRH  + VMSS S
Sbjct: 235 VGPVPMFSMPNPSKSIDLNANHNSTIEPSSLSLRLSLSLDQGQASSTRHSAYNVMSSFS 293


>ref|NP_001275346.1| transcription factor MYB1R1 [Solanum tuberosum]
           gi|122232932|sp|Q2V9B0.1|MY1R1_SOLTU RecName:
           Full=Transcription factor MYB1R1; AltName:
           Full=Myb-related protein R1; Short=StMYB1R-1
           gi|82621140|gb|ABB86258.1| putative DNA binding
           protein-like [Solanum tuberosum]
          Length = 297

 Score =  147 bits (371), Expect = 3e-33
 Identities = 78/119 (65%), Positives = 83/119 (69%)
 Frame = -1

Query: 727 KNNQEISVVAPAASPTAETTKTNALPMAPAVGPIMLPAQIDKSRESPTLFQRDQANSPML 548
           +N QEI VVAPA  PT   TKTNA P+AP VGPI+ P QIDKSRE PTL + D  NS ML
Sbjct: 173 ENKQEIPVVAPATLPT---TKTNAFPVAPTVGPIIFPVQIDKSREYPTLLRHDHGNSSML 229

Query: 547 VRPVPMFSMPNPKTVIDLNTNQNSTIEPXXXXXXXXXXLDQGQASSTRHPTFKVMSSIS 371
           V PVPMFSMPNP T IDLN N NSTIEP          LDQGQASSTRH  + VMSS S
Sbjct: 230 VGPVPMFSMPNPSTAIDLNANHNSTIEPSSLSLRLSLSLDQGQASSTRHSAYNVMSSFS 288


Top