BLASTX nr result

ID: Atropa21_contig00000641 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00000641
         (656 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006347800.1| PREDICTED: 40S ribosomal protein S24-1-like ...    67   4e-09
ref|XP_004247175.1| PREDICTED: 40S ribosomal protein S24-2-like ...    67   4e-09
ref|XP_004230123.1| PREDICTED: 40S ribosomal protein S24-2-like ...    67   4e-09
ref|XP_004242335.1| PREDICTED: 40S ribosomal protein S24-2-like ...    67   5e-09
prf||1909359A ribosomal protein S19                                    65   2e-08
gb|EOY11138.1| Ribosomal protein S24e family protein [Theobroma ...    65   2e-08
gb|EOY05681.1| Ribosomal protein S24e family protein isoform 2 [...    65   2e-08
gb|EOY05680.1| Ribosomal protein S24e family protein isoform 1 [...    65   2e-08
ref|XP_002319622.1| predicted protein [Populus trichocarpa]            64   4e-08
ref|XP_002328359.1| predicted protein [Populus trichocarpa]            64   4e-08
ref|XP_006389325.1| 40S ribosomal protein S24 [Populus trichocar...    64   4e-08
ref|XP_006382757.1| 40S ribosomal protein S24 [Populus trichocar...    64   4e-08
gb|AAM63791.1| 40S ribosomal protein S19-like [Arabidopsis thali...    64   4e-08
ref|NP_001105635.1| LOC542641 [Zea mays] gi|10803047|gb|AAG23693...    64   5e-08
gb|AFW83774.1| hypothetical protein ZEAMMB73_672763 [Zea mays]         64   5e-08
ref|XP_002453563.1| hypothetical protein SORBIDRAFT_04g008130 [S...    64   5e-08
gb|ACG33565.1| 40S ribosomal protein S24 [Zea mays]                    64   5e-08
ref|NP_001146968.1| ribosomal protein S24 [Zea mays] gi|19560595...    64   5e-08
gb|ACF82120.1| unknown [Zea mays] gi|195605604|gb|ACG24632.1| 40...    64   5e-08
gb|ABJ74185.1| putative ribosomal protein [Artemisia annua]            64   5e-08

>ref|XP_006347800.1| PREDICTED: 40S ribosomal protein S24-1-like [Solanum tuberosum]
          Length = 133

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 36/51 (70%), Positives = 38/51 (74%), Gaps = 11/51 (21%)
 Frame = -1

Query: 656 NAKKYEPKYRLIR-----------KQMKERKTRAKKVHGVKQTKSGDAKKK 537
           NAKKYEPKYRLIR           KQMKERK RAKKV GVK+TK+GDAKKK
Sbjct: 83  NAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKVRGVKKTKAGDAKKK 133


>ref|XP_004247175.1| PREDICTED: 40S ribosomal protein S24-2-like [Solanum lycopersicum]
           gi|565366008|ref|XP_006349688.1| PREDICTED: 40S
           ribosomal protein S24-1-like isoform X1 [Solanum
           tuberosum] gi|565366010|ref|XP_006349689.1| PREDICTED:
           40S ribosomal protein S24-1-like isoform X2 [Solanum
           tuberosum] gi|565372375|ref|XP_006352771.1| PREDICTED:
           40S ribosomal protein S24-1-like [Solanum tuberosum]
          Length = 133

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 36/51 (70%), Positives = 38/51 (74%), Gaps = 11/51 (21%)
 Frame = -1

Query: 656 NAKKYEPKYRLIR-----------KQMKERKTRAKKVHGVKQTKSGDAKKK 537
           NAKKYEPKYRLIR           KQMKERK RAKKV GVK+TK+GDAKKK
Sbjct: 83  NAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKVRGVKKTKAGDAKKK 133


>ref|XP_004230123.1| PREDICTED: 40S ribosomal protein S24-2-like [Solanum lycopersicum]
          Length = 133

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 36/51 (70%), Positives = 38/51 (74%), Gaps = 11/51 (21%)
 Frame = -1

Query: 656 NAKKYEPKYRLIR-----------KQMKERKTRAKKVHGVKQTKSGDAKKK 537
           NAKKYEPKYRLIR           KQMKERK RAKKV GVK+TK+GDAKKK
Sbjct: 83  NAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKVRGVKKTKAGDAKKK 133


>ref|XP_004242335.1| PREDICTED: 40S ribosomal protein S24-2-like isoform 1 [Solanum
           lycopersicum] gi|460393478|ref|XP_004242336.1|
           PREDICTED: 40S ribosomal protein S24-2-like isoform 2
           [Solanum lycopersicum]
          Length = 133

 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 35/51 (68%), Positives = 38/51 (74%), Gaps = 11/51 (21%)
 Frame = -1

Query: 656 NAKKYEPKYRLIR-----------KQMKERKTRAKKVHGVKQTKSGDAKKK 537
           NAKKYEPKYRLIR           KQMKERK RAKK+ GVK+TK+GDAKKK
Sbjct: 83  NAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKKTKAGDAKKK 133


>prf||1909359A ribosomal protein S19
          Length = 133

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 35/51 (68%), Positives = 37/51 (72%), Gaps = 11/51 (21%)
 Frame = -1

Query: 656 NAKKYEPKYRLIR-----------KQMKERKTRAKKVHGVKQTKSGDAKKK 537
           NAKKYEPKYRLIR           KQMKERK RAKKV GVK+ K+GDAKKK
Sbjct: 83  NAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKVRGVKKIKAGDAKKK 133


>gb|EOY11138.1| Ribosomal protein S24e family protein [Theobroma cacao]
          Length = 134

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 34/51 (66%), Positives = 37/51 (72%), Gaps = 11/51 (21%)
 Frame = -1

Query: 656 NAKKYEPKYRLIR-----------KQMKERKTRAKKVHGVKQTKSGDAKKK 537
           NAKKYEPKYRLIR           KQMKERK RAKK+ GVK+TK+GDA KK
Sbjct: 83  NAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKKTKAGDAAKK 133


>gb|EOY05681.1| Ribosomal protein S24e family protein isoform 2 [Theobroma cacao]
          Length = 120

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 34/51 (66%), Positives = 37/51 (72%), Gaps = 11/51 (21%)
 Frame = -1

Query: 656 NAKKYEPKYRLIR-----------KQMKERKTRAKKVHGVKQTKSGDAKKK 537
           NAKKYEPKYRLIR           KQMKERK RAKK+ GVK+TK+GDA KK
Sbjct: 69  NAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKKTKAGDAAKK 119


>gb|EOY05680.1| Ribosomal protein S24e family protein isoform 1 [Theobroma cacao]
          Length = 139

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 34/51 (66%), Positives = 37/51 (72%), Gaps = 11/51 (21%)
 Frame = -1

Query: 656 NAKKYEPKYRLIR-----------KQMKERKTRAKKVHGVKQTKSGDAKKK 537
           NAKKYEPKYRLIR           KQMKERK RAKK+ GVK+TK+GDA KK
Sbjct: 83  NAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKKTKAGDAAKK 133


>ref|XP_002319622.1| predicted protein [Populus trichocarpa]
          Length = 133

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 34/51 (66%), Positives = 37/51 (72%), Gaps = 11/51 (21%)
 Frame = -1

Query: 656 NAKKYEPKYRLIR-----------KQMKERKTRAKKVHGVKQTKSGDAKKK 537
           NAKKYEPKYRLIR           KQ+KERK RAKKV GVK+TK+GDA KK
Sbjct: 83  NAKKYEPKYRLIRNGLATKIEKSRKQLKERKNRAKKVRGVKKTKAGDAAKK 133


>ref|XP_002328359.1| predicted protein [Populus trichocarpa]
          Length = 133

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 34/51 (66%), Positives = 37/51 (72%), Gaps = 11/51 (21%)
 Frame = -1

Query: 656 NAKKYEPKYRLIR-----------KQMKERKTRAKKVHGVKQTKSGDAKKK 537
           NAKKYEPKYRLIR           KQ+KERK RAKKV GVK+TK+GDA KK
Sbjct: 83  NAKKYEPKYRLIRNGLATKVEKSRKQLKERKNRAKKVRGVKKTKAGDAAKK 133


>ref|XP_006389325.1| 40S ribosomal protein S24 [Populus trichocarpa]
           gi|118483753|gb|ABK93769.1| unknown [Populus
           trichocarpa] gi|550312085|gb|ERP48239.1| 40S ribosomal
           protein S24 [Populus trichocarpa]
          Length = 134

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 34/51 (66%), Positives = 37/51 (72%), Gaps = 11/51 (21%)
 Frame = -1

Query: 656 NAKKYEPKYRLIR-----------KQMKERKTRAKKVHGVKQTKSGDAKKK 537
           NAKKYEPKYRLIR           KQ+KERK RAKKV GVK+TK+GDA KK
Sbjct: 83  NAKKYEPKYRLIRNGLATKIEKSRKQLKERKNRAKKVRGVKKTKAGDAAKK 133


>ref|XP_006382757.1| 40S ribosomal protein S24 [Populus trichocarpa]
           gi|118481816|gb|ABK92845.1| unknown [Populus
           trichocarpa] gi|550338124|gb|ERP60554.1| 40S ribosomal
           protein S24 [Populus trichocarpa]
          Length = 134

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 34/51 (66%), Positives = 37/51 (72%), Gaps = 11/51 (21%)
 Frame = -1

Query: 656 NAKKYEPKYRLIR-----------KQMKERKTRAKKVHGVKQTKSGDAKKK 537
           NAKKYEPKYRLIR           KQ+KERK RAKKV GVK+TK+GDA KK
Sbjct: 83  NAKKYEPKYRLIRNGLATKVEKSRKQLKERKNRAKKVRGVKKTKAGDAAKK 133


>gb|AAM63791.1| 40S ribosomal protein S19-like [Arabidopsis thaliana]
          Length = 133

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 33/51 (64%), Positives = 38/51 (74%), Gaps = 11/51 (21%)
 Frame = -1

Query: 656 NAKKYEPKYRLIR-----------KQMKERKTRAKKVHGVKQTKSGDAKKK 537
           NAKK+EPKYRLIR           KQ+KERK RAKK+ GVK+TK+GDAKKK
Sbjct: 83  NAKKFEPKYRLIRNGLDTKIEKSRKQIKERKNRAKKIRGVKKTKAGDAKKK 133


>ref|NP_001105635.1| LOC542641 [Zea mays] gi|10803047|gb|AAG23693.1| 40S ribosomal
           protein S24 [Zea mays]
          Length = 137

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 33/51 (64%), Positives = 38/51 (74%), Gaps = 11/51 (21%)
 Frame = -1

Query: 656 NAKKYEPKYRLIR-----------KQMKERKTRAKKVHGVKQTKSGDAKKK 537
           +AKK+EPKYRLIR           KQMKERK RAKK+ GVK+TK+GDAKKK
Sbjct: 87  SAKKFEPKYRLIRNGLATKVEKSRKQMKERKNRAKKIRGVKKTKAGDAKKK 137


>gb|AFW83774.1| hypothetical protein ZEAMMB73_672763 [Zea mays]
          Length = 86

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 33/51 (64%), Positives = 38/51 (74%), Gaps = 11/51 (21%)
 Frame = -1

Query: 656 NAKKYEPKYRLIR-----------KQMKERKTRAKKVHGVKQTKSGDAKKK 537
           +AKK+EPKYRLIR           KQMKERK RAKK+ GVK+TK+GDAKKK
Sbjct: 36  SAKKFEPKYRLIRNGLATKVEKSRKQMKERKNRAKKIRGVKKTKAGDAKKK 86


>ref|XP_002453563.1| hypothetical protein SORBIDRAFT_04g008130 [Sorghum bicolor]
           gi|241933394|gb|EES06539.1| hypothetical protein
           SORBIDRAFT_04g008130 [Sorghum bicolor]
          Length = 137

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 33/51 (64%), Positives = 38/51 (74%), Gaps = 11/51 (21%)
 Frame = -1

Query: 656 NAKKYEPKYRLIR-----------KQMKERKTRAKKVHGVKQTKSGDAKKK 537
           +AKK+EPKYRLIR           KQMKERK RAKK+ GVK+TK+GDAKKK
Sbjct: 87  SAKKFEPKYRLIRNGLATKVEKSRKQMKERKNRAKKIRGVKKTKAGDAKKK 137


>gb|ACG33565.1| 40S ribosomal protein S24 [Zea mays]
          Length = 120

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 33/51 (64%), Positives = 38/51 (74%), Gaps = 11/51 (21%)
 Frame = -1

Query: 656 NAKKYEPKYRLIR-----------KQMKERKTRAKKVHGVKQTKSGDAKKK 537
           +AKK+EPKYRLIR           KQMKERK RAKK+ GVK+TK+GDAKKK
Sbjct: 70  SAKKFEPKYRLIRNGLATKVEKSRKQMKERKNRAKKIRGVKKTKAGDAKKK 120


>ref|NP_001146968.1| ribosomal protein S24 [Zea mays] gi|195605952|gb|ACG24806.1| 40S
           ribosomal protein S24 [Zea mays]
           gi|195608026|gb|ACG25843.1| 40S ribosomal protein S24
           [Zea mays] gi|238013252|gb|ACR37661.1| unknown [Zea
           mays] gi|413936689|gb|AFW71240.1| 40S ribosomal protein
           S24 [Zea mays]
          Length = 137

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 33/51 (64%), Positives = 38/51 (74%), Gaps = 11/51 (21%)
 Frame = -1

Query: 656 NAKKYEPKYRLIR-----------KQMKERKTRAKKVHGVKQTKSGDAKKK 537
           +AKK+EPKYRLIR           KQMKERK RAKK+ GVK+TK+GDAKKK
Sbjct: 87  SAKKFEPKYRLIRNGLATKVEKSRKQMKERKNRAKKIRGVKKTKAGDAKKK 137


>gb|ACF82120.1| unknown [Zea mays] gi|195605604|gb|ACG24632.1| 40S ribosomal
           protein S24 [Zea mays] gi|195657831|gb|ACG48383.1| 40S
           ribosomal protein S24 [Zea mays]
           gi|413951128|gb|AFW83777.1| 40S ribosomal protein S24
           [Zea mays]
          Length = 137

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 33/51 (64%), Positives = 38/51 (74%), Gaps = 11/51 (21%)
 Frame = -1

Query: 656 NAKKYEPKYRLIR-----------KQMKERKTRAKKVHGVKQTKSGDAKKK 537
           +AKK+EPKYRLIR           KQMKERK RAKK+ GVK+TK+GDAKKK
Sbjct: 87  SAKKFEPKYRLIRNGLATKVEKSRKQMKERKNRAKKIRGVKKTKAGDAKKK 137


>gb|ABJ74185.1| putative ribosomal protein [Artemisia annua]
          Length = 102

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 33/51 (64%), Positives = 37/51 (72%), Gaps = 11/51 (21%)
 Frame = -1

Query: 656 NAKKYEPKYRLIR-----------KQMKERKTRAKKVHGVKQTKSGDAKKK 537
           NAKKYEPKYRLIR           KQ+KERK RAKK+ GVK+TK+GDA KK
Sbjct: 50  NAKKYEPKYRLIRNGLDTKVERSRKQLKERKNRAKKIRGVKKTKAGDAAKK 100


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