BLASTX nr result

ID: Atropa21_contig00000512 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00000512
         (553 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAO49734.1| nuclear pore complex protein Nup98a [Nicotiana b...   119   6e-25
ref|XP_004236952.1| PREDICTED: nuclear pore complex protein Nup9...   114   2e-23
ref|XP_006360453.1| PREDICTED: nuclear pore complex protein Nup9...   110   2e-22
ref|XP_006360451.1| PREDICTED: nuclear pore complex protein Nup9...   110   2e-22
ref|XP_006840418.1| hypothetical protein AMTR_s00045p00157300, p...    94   3e-17
dbj|BAF98996.1| nucleoporin 98 [Daucus carota]                         93   4e-17
ref|XP_002277144.1| PREDICTED: nuclear pore complex protein Nup9...    93   5e-17
ref|XP_006439171.1| hypothetical protein CICLE_v10018664mg [Citr...    88   1e-15
ref|XP_006439170.1| hypothetical protein CICLE_v10018664mg [Citr...    88   1e-15
ref|XP_006476243.1| PREDICTED: nuclear pore complex protein Nup9...    86   5e-15
ref|XP_006476241.1| PREDICTED: nuclear pore complex protein Nup9...    86   5e-15
ref|XP_004148101.1| PREDICTED: nucleoporin nup189-like [Cucumis ...    86   6e-15
ref|NP_172510.2| nucleoporin autopeptidase [Arabidopsis thaliana...    86   8e-15
gb|EOY23794.1| Nucleoporin autopeptidase, putative [Theobroma ca...    85   1e-14
gb|ESW21495.1| hypothetical protein PHAVU_005G075600g [Phaseolus...    84   2e-14
gb|ESW21494.1| hypothetical protein PHAVU_005G075600g [Phaseolus...    84   2e-14
ref|XP_006417471.1| hypothetical protein EUTSA_v10006652mg [Eutr...    82   9e-14
gb|EMJ11603.1| hypothetical protein PRUPE_ppa000784mg [Prunus pe...    82   9e-14
ref|XP_004495519.1| PREDICTED: nuclear pore complex protein Nup9...    82   1e-13
ref|XP_004495517.1| PREDICTED: nuclear pore complex protein Nup9...    82   1e-13

>dbj|BAO49734.1| nuclear pore complex protein Nup98a [Nicotiana benthamiana]
          Length = 1023

 Score =  119 bits (297), Expect = 6e-25
 Identities = 60/82 (73%), Positives = 61/82 (74%)
 Frame = +2

Query: 308 MFGSTNAFGQSSTSPFGSQSGFGQTSNNPFAPQPFGSTNPXXXXXXXXXXXXXXXXXXXX 487
           MFGSTNAFGQSSTSPFGSQSGFGQTSNNPFAP+PFGSTNP                    
Sbjct: 1   MFGSTNAFGQSSTSPFGSQSGFGQTSNNPFAPKPFGSTNPFGSQSGGSFFGSTSTGVFGT 60

Query: 488 PQSSSPLGSTPGFGASSSPAFG 553
           PQSSSPLGSTP FGASSSPAFG
Sbjct: 61  PQSSSPLGSTPVFGASSSPAFG 82


>ref|XP_004236952.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like [Solanum
           lycopersicum]
          Length = 994

 Score =  114 bits (285), Expect = 2e-23
 Identities = 58/82 (70%), Positives = 60/82 (73%)
 Frame = +2

Query: 308 MFGSTNAFGQSSTSPFGSQSGFGQTSNNPFAPQPFGSTNPXXXXXXXXXXXXXXXXXXXX 487
           MFGSTNAFGQSS+SPFGSQSGFGQTSNNPFAP+PFGSTNP                    
Sbjct: 1   MFGSTNAFGQSSSSPFGSQSGFGQTSNNPFAPKPFGSTNPFGSQSGASFFGSTSTGVFGT 60

Query: 488 PQSSSPLGSTPGFGASSSPAFG 553
           PQSSSPLGST  FGASSSPAFG
Sbjct: 61  PQSSSPLGSTSVFGASSSPAFG 82


>ref|XP_006360453.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X3
           [Solanum tuberosum]
          Length = 993

 Score =  110 bits (276), Expect = 2e-22
 Identities = 57/82 (69%), Positives = 59/82 (71%)
 Frame = +2

Query: 308 MFGSTNAFGQSSTSPFGSQSGFGQTSNNPFAPQPFGSTNPXXXXXXXXXXXXXXXXXXXX 487
           MFGSTNAFGQSS+SPFGSQS FGQTSNNPFAP+PFGSTNP                    
Sbjct: 1   MFGSTNAFGQSSSSPFGSQSVFGQTSNNPFAPKPFGSTNPFGSQSGGSFFGSTSTGVFGT 60

Query: 488 PQSSSPLGSTPGFGASSSPAFG 553
           PQSSSPLGST  FGASSSPAFG
Sbjct: 61  PQSSSPLGSTSVFGASSSPAFG 82


>ref|XP_006360451.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X1
           [Solanum tuberosum] gi|565389417|ref|XP_006360452.1|
           PREDICTED: nuclear pore complex protein Nup98-Nup96-like
           isoform X2 [Solanum tuberosum]
          Length = 994

 Score =  110 bits (276), Expect = 2e-22
 Identities = 57/82 (69%), Positives = 59/82 (71%)
 Frame = +2

Query: 308 MFGSTNAFGQSSTSPFGSQSGFGQTSNNPFAPQPFGSTNPXXXXXXXXXXXXXXXXXXXX 487
           MFGSTNAFGQSS+SPFGSQS FGQTSNNPFAP+PFGSTNP                    
Sbjct: 1   MFGSTNAFGQSSSSPFGSQSVFGQTSNNPFAPKPFGSTNPFGSQSGGSFFGSTSTGVFGT 60

Query: 488 PQSSSPLGSTPGFGASSSPAFG 553
           PQSSSPLGST  FGASSSPAFG
Sbjct: 61  PQSSSPLGSTSVFGASSSPAFG 82


>ref|XP_006840418.1| hypothetical protein AMTR_s00045p00157300, partial [Amborella
           trichopoda] gi|548842136|gb|ERN02093.1| hypothetical
           protein AMTR_s00045p00157300, partial [Amborella
           trichopoda]
          Length = 1086

 Score = 93.6 bits (231), Expect = 3e-17
 Identities = 50/86 (58%), Positives = 54/86 (62%), Gaps = 3/86 (3%)
 Frame = +2

Query: 305 TMFGSTNAFGQSSTSPFGSQSGFGQ---TSNNPFAPQPFGSTNPXXXXXXXXXXXXXXXX 475
           TMFGSTN FGQSS+SPFGS S FGQ    +NNPFAP+PFGS  P                
Sbjct: 13  TMFGSTNPFGQSSSSPFGSPSVFGQPTNANNNPFAPKPFGSPTPFGSQTGSSIFGGTSTG 72

Query: 476 XXXXPQSSSPLGSTPGFGASSSPAFG 553
                Q SSPLGSTP FGASS+PAFG
Sbjct: 73  VFGATQPSSPLGSTPAFGASSTPAFG 98


>dbj|BAF98996.1| nucleoporin 98 [Daucus carota]
          Length = 1005

 Score = 93.2 bits (230), Expect = 4e-17
 Identities = 51/85 (60%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
 Frame = +2

Query: 308 MFGSTNAFGQSSTSPFGSQSGFGQT---SNNPFAPQPFGSTNPXXXXXXXXXXXXXXXXX 478
           MFGSTN FGQSSTSPFG+QS FGQ    S+NPFAP PFGST P                 
Sbjct: 1   MFGSTNPFGQSSTSPFGTQSTFGQASSGSSNPFAPNPFGSTTPFGTQTGGSLFGGSATGV 60

Query: 479 XXXPQSSSPLGSTPGFGASSSPAFG 553
               Q+SSPL STP FGASSSPAFG
Sbjct: 61  FGSNQASSPLPSTPVFGASSSPAFG 85


>ref|XP_002277144.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform 1
           [Vitis vinifera]
          Length = 1013

 Score = 92.8 bits (229), Expect = 5e-17
 Identities = 51/85 (60%), Positives = 55/85 (64%), Gaps = 3/85 (3%)
 Frame = +2

Query: 308 MFGSTNAFGQSSTSPFGSQSGFGQTSN---NPFAPQPFGSTNPXXXXXXXXXXXXXXXXX 478
           MFGS+N FGQSS+SPFGSQS FGQT+N   NPFAP+PFGST P                 
Sbjct: 1   MFGSSNPFGQSSSSPFGSQSVFGQTNNATTNPFAPKPFGSTTPFGAQTGGSIFGGTSTGV 60

Query: 479 XXXPQSSSPLGSTPGFGASSSPAFG 553
               QSSSPL ST  FGASSSPAFG
Sbjct: 61  FGATQSSSPLPSTATFGASSSPAFG 85


>ref|XP_006439171.1| hypothetical protein CICLE_v10018664mg [Citrus clementina]
           gi|557541433|gb|ESR52411.1| hypothetical protein
           CICLE_v10018664mg [Citrus clementina]
          Length = 1006

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 50/85 (58%), Positives = 53/85 (62%), Gaps = 3/85 (3%)
 Frame = +2

Query: 308 MFGSTNAFGQSSTSPFGSQSGFGQ---TSNNPFAPQPFGSTNPXXXXXXXXXXXXXXXXX 478
           MFGSTN FGQSS+SPFGSQS FGQ    SNNPFAP+PFG+T P                 
Sbjct: 1   MFGSTNPFGQSSSSPFGSQSIFGQNNNASNNPFAPKPFGTTTP-FGSTGSSIFGGTSTGV 59

Query: 479 XXXPQSSSPLGSTPGFGASSSPAFG 553
              PQSSSP  S   FGASSSPAFG
Sbjct: 60  FGAPQSSSPFSSATTFGASSSPAFG 84


>ref|XP_006439170.1| hypothetical protein CICLE_v10018664mg [Citrus clementina]
           gi|557541432|gb|ESR52410.1| hypothetical protein
           CICLE_v10018664mg [Citrus clementina]
          Length = 1017

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 50/85 (58%), Positives = 53/85 (62%), Gaps = 3/85 (3%)
 Frame = +2

Query: 308 MFGSTNAFGQSSTSPFGSQSGFGQ---TSNNPFAPQPFGSTNPXXXXXXXXXXXXXXXXX 478
           MFGSTN FGQSS+SPFGSQS FGQ    SNNPFAP+PFG+T P                 
Sbjct: 1   MFGSTNPFGQSSSSPFGSQSIFGQNNNASNNPFAPKPFGTTTP-FGSTGSSIFGGTSTGV 59

Query: 479 XXXPQSSSPLGSTPGFGASSSPAFG 553
              PQSSSP  S   FGASSSPAFG
Sbjct: 60  FGAPQSSSPFSSATTFGASSSPAFG 84


>ref|XP_006476243.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X3
           [Citrus sinensis]
          Length = 998

 Score = 86.3 bits (212), Expect = 5e-15
 Identities = 49/85 (57%), Positives = 52/85 (61%), Gaps = 3/85 (3%)
 Frame = +2

Query: 308 MFGSTNAFGQSSTSPFGSQSGFGQ---TSNNPFAPQPFGSTNPXXXXXXXXXXXXXXXXX 478
           MFGSTN FGQSS+SPFGSQS FGQ    SNNPFAP+PFG+T P                 
Sbjct: 1   MFGSTNPFGQSSSSPFGSQSVFGQNNNASNNPFAPKPFGTTTP-FGSTGSSIFGGTSTGV 59

Query: 479 XXXPQSSSPLGSTPGFGASSSPAFG 553
              P SSSP  S   FGASSSPAFG
Sbjct: 60  FGAPPSSSPFSSATTFGASSSPAFG 84


>ref|XP_006476241.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X1
           [Citrus sinensis] gi|568844741|ref|XP_006476242.1|
           PREDICTED: nuclear pore complex protein Nup98-Nup96-like
           isoform X2 [Citrus sinensis]
          Length = 1009

 Score = 86.3 bits (212), Expect = 5e-15
 Identities = 49/85 (57%), Positives = 52/85 (61%), Gaps = 3/85 (3%)
 Frame = +2

Query: 308 MFGSTNAFGQSSTSPFGSQSGFGQ---TSNNPFAPQPFGSTNPXXXXXXXXXXXXXXXXX 478
           MFGSTN FGQSS+SPFGSQS FGQ    SNNPFAP+PFG+T P                 
Sbjct: 1   MFGSTNPFGQSSSSPFGSQSVFGQNNNASNNPFAPKPFGTTTP-FGSTGSSIFGGTSTGV 59

Query: 479 XXXPQSSSPLGSTPGFGASSSPAFG 553
              P SSSP  S   FGASSSPAFG
Sbjct: 60  FGAPPSSSPFSSATTFGASSSPAFG 84


>ref|XP_004148101.1| PREDICTED: nucleoporin nup189-like [Cucumis sativus]
          Length = 994

 Score = 85.9 bits (211), Expect = 6e-15
 Identities = 48/85 (56%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
 Frame = +2

Query: 308 MFGSTNAFGQSSTSPFGSQSGFGQT---SNNPFAPQPFGSTNPXXXXXXXXXXXXXXXXX 478
           MFGS N FGQ STSPF SQ  FGQT   SNNPFAP+PFGST+P                 
Sbjct: 1   MFGSPNPFGQPSTSPFASQPVFGQTANASNNPFAPKPFGSTSPFGPQTGNTVFGGTSTGV 60

Query: 479 XXXPQSSSPLGSTPGFGASSSPAFG 553
               QSSSP  ST  FG SSSPAFG
Sbjct: 61  FGAAQSSSPFPSTTTFGGSSSPAFG 85


>ref|NP_172510.2| nucleoporin autopeptidase [Arabidopsis thaliana]
           gi|79317517|ref|NP_001031018.1| nucleoporin
           autopeptidase [Arabidopsis thaliana]
           gi|19310423|gb|AAL84948.1| At1g10390/F14N23_29
           [Arabidopsis thaliana] gi|27764948|gb|AAO23595.1|
           At1g10390/F14N23_29 [Arabidopsis thaliana]
           gi|110742211|dbj|BAE99032.1| hypothetical protein
           [Arabidopsis thaliana] gi|332190453|gb|AEE28574.1|
           nucleoporin autopeptidase [Arabidopsis thaliana]
           gi|332190454|gb|AEE28575.1| nucleoporin autopeptidase
           [Arabidopsis thaliana]
          Length = 1041

 Score = 85.5 bits (210), Expect = 8e-15
 Identities = 51/88 (57%), Positives = 55/88 (62%), Gaps = 6/88 (6%)
 Frame = +2

Query: 308 MFGSTNAFGQSS-TSPFGSQSGFGQTSN----NPFAPQ-PFGSTNPXXXXXXXXXXXXXX 469
           MFGS+N FGQSS TSPFGSQS FGQTSN    NPFAP  PFG++ P              
Sbjct: 1   MFGSSNPFGQSSGTSPFGSQSLFGQTSNTSSNNPFAPATPFGTSAPFAAQSGSSIFGSTS 60

Query: 470 XXXXXXPQSSSPLGSTPGFGASSSPAFG 553
                 PQ+SSP  STP FGASSSPAFG
Sbjct: 61  TGVFGAPQTSSPFASTPTFGASSSPAFG 88


>gb|EOY23794.1| Nucleoporin autopeptidase, putative [Theobroma cacao]
          Length = 1009

 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 49/86 (56%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
 Frame = +2

Query: 308 MFGSTNAFGQSSTSPFGSQSGFGQTSN---NPFAPQP-FGSTNPXXXXXXXXXXXXXXXX 475
           MFGSTN FGQSS+SPF SQS FGQT+N   NPFAP+P FGS  P                
Sbjct: 1   MFGSTNPFGQSSSSPFASQSVFGQTNNASTNPFAPKPSFGSPTPFGSQTGGSIFGGTSTG 60

Query: 476 XXXXPQSSSPLGSTPGFGASSSPAFG 553
                QSSSP  ST  FGASSSPAFG
Sbjct: 61  VFGAAQSSSPFSSTTAFGASSSPAFG 86


>gb|ESW21495.1| hypothetical protein PHAVU_005G075600g [Phaseolus vulgaris]
          Length = 1041

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 48/84 (57%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
 Frame = +2

Query: 308 MFGSTNAFGQSSTSPFGSQSGFGQT--SNNPFAPQPFGSTNPXXXXXXXXXXXXXXXXXX 481
           MFGS N FGQSS+SPFGSQS FGQT  S NPFAP+PFGST+P                  
Sbjct: 1   MFGS-NPFGQSSSSPFGSQSVFGQTNSSTNPFAPKPFGSTSPFGSQTGSSMFGGTSTGVF 59

Query: 482 XXPQSSSPLGSTPGFGASSSPAFG 553
              Q SSP  S   FGASSSPAFG
Sbjct: 60  GAAQQSSPFASNTAFGASSSPAFG 83


>gb|ESW21494.1| hypothetical protein PHAVU_005G075600g [Phaseolus vulgaris]
          Length = 1044

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 48/84 (57%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
 Frame = +2

Query: 308 MFGSTNAFGQSSTSPFGSQSGFGQT--SNNPFAPQPFGSTNPXXXXXXXXXXXXXXXXXX 481
           MFGS N FGQSS+SPFGSQS FGQT  S NPFAP+PFGST+P                  
Sbjct: 1   MFGS-NPFGQSSSSPFGSQSVFGQTNSSTNPFAPKPFGSTSPFGSQTGSSMFGGTSTGVF 59

Query: 482 XXPQSSSPLGSTPGFGASSSPAFG 553
              Q SSP  S   FGASSSPAFG
Sbjct: 60  GAAQQSSPFASNTAFGASSSPAFG 83


>ref|XP_006417471.1| hypothetical protein EUTSA_v10006652mg [Eutrema salsugineum]
           gi|557095242|gb|ESQ35824.1| hypothetical protein
           EUTSA_v10006652mg [Eutrema salsugineum]
          Length = 1042

 Score = 82.0 bits (201), Expect = 9e-14
 Identities = 50/88 (56%), Positives = 54/88 (61%), Gaps = 6/88 (6%)
 Frame = +2

Query: 308 MFGSTNAFGQSS-TSPFGSQSGFGQTSN----NPFAPQ-PFGSTNPXXXXXXXXXXXXXX 469
           MFGS+N FGQSS +SPFGSQS FGQTSN    NPFAP  PFGS+ P              
Sbjct: 1   MFGSSNPFGQSSGSSPFGSQSLFGQTSNSSSNNPFAPATPFGSSAPFAAQTGSSIFGGTS 60

Query: 470 XXXXXXPQSSSPLGSTPGFGASSSPAFG 553
                 PQ+SSP  ST  FGASSSPAFG
Sbjct: 61  TGVFGAPQTSSPFASTTTFGASSSPAFG 88


>gb|EMJ11603.1| hypothetical protein PRUPE_ppa000784mg [Prunus persica]
          Length = 1004

 Score = 82.0 bits (201), Expect = 9e-14
 Identities = 48/86 (55%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
 Frame = +2

Query: 308 MFGSTNAFGQSSTSPFGSQSGFGQ---TSNNPFAPQPFGSTNPXXXXXXXXXXXXXXXXX 478
           MFGSTN FGQSS+SPF SQ  FGQ   TSNNPF P+PFGST P                 
Sbjct: 1   MFGSTNPFGQSSSSPFASQPVFGQTSNTSNNPFVPKPFGSTTPFGAQTGSSIFGGTSTGV 60

Query: 479 XXXPQSSSPLGSTPGFG-ASSSPAFG 553
               QSSSP  S+  FG ASSSPAFG
Sbjct: 61  FGAAQSSSPFPSSTTFGAASSSPAFG 86


>ref|XP_004495519.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X4
           [Cicer arietinum]
          Length = 1022

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 46/86 (53%), Positives = 53/86 (61%), Gaps = 4/86 (4%)
 Frame = +2

Query: 308 MFGSTNAFGQSSTSPFG-SQSGFGQ---TSNNPFAPQPFGSTNPXXXXXXXXXXXXXXXX 475
           MFGS+N FGQ+S+SPFG SQS FGQ   +SNNPFAP+PFG+T P                
Sbjct: 1   MFGSSNPFGQASSSPFGSSQSVFGQQNNSSNNPFAPKPFGTTTPFGSQTGNSMFGGTSTG 60

Query: 476 XXXXPQSSSPLGSTPGFGASSSPAFG 553
                Q+SSP  S   FGASSSPAFG
Sbjct: 61  VFGAAQTSSPFSSNTTFGASSSPAFG 86


>ref|XP_004495517.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X2
           [Cicer arietinum]
          Length = 1025

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 46/86 (53%), Positives = 53/86 (61%), Gaps = 4/86 (4%)
 Frame = +2

Query: 308 MFGSTNAFGQSSTSPFG-SQSGFGQ---TSNNPFAPQPFGSTNPXXXXXXXXXXXXXXXX 475
           MFGS+N FGQ+S+SPFG SQS FGQ   +SNNPFAP+PFG+T P                
Sbjct: 1   MFGSSNPFGQASSSPFGSSQSVFGQQNNSSNNPFAPKPFGTTTPFGSQTGNSMFGGTSTG 60

Query: 476 XXXXPQSSSPLGSTPGFGASSSPAFG 553
                Q+SSP  S   FGASSSPAFG
Sbjct: 61  VFGAAQTSSPFSSNTTFGASSSPAFG 86


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