BLASTX nr result
ID: Atropa21_contig00000324
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00000324
(663 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY09191.1| Cyclin-like family protein isoform 2, partial [Th... 145 8e-56
ref|XP_006351254.1| PREDICTED: transcription initiation factor I... 204 2e-50
ref|XP_006351253.1| PREDICTED: transcription initiation factor I... 204 2e-50
ref|XP_004249217.1| PREDICTED: transcription initiation factor I... 204 2e-50
ref|XP_006351306.1| PREDICTED: transcription initiation factor I... 193 3e-47
ref|XP_004249253.1| PREDICTED: transcription initiation factor I... 193 3e-47
gb|EPS61179.1| hypothetical protein M569_13619, partial [Genlise... 184 2e-44
ref|XP_006298174.1| hypothetical protein CARUB_v10014225mg [Caps... 158 2e-36
ref|XP_006289549.1| hypothetical protein CARUB_v10003094mg [Caps... 158 2e-36
emb|CAA84309.1| AtTFIIB2 [Arabidopsis thaliana] 158 2e-36
ref|NP_187644.1| transcription initiation factor IIB-2 [Arabidop... 158 2e-36
ref|XP_002882661.1| transcription initiation factor IIB-2 [Arabi... 158 2e-36
gb|ESW17584.1| hypothetical protein PHAVU_007G251400g [Phaseolus... 155 1e-35
ref|XP_004304334.1| PREDICTED: transcription initiation factor I... 155 1e-35
gb|EMJ03476.1| hypothetical protein PRUPE_ppa008972mg [Prunus pe... 155 1e-35
ref|XP_004150610.1| PREDICTED: transcription initiation factor I... 155 1e-35
ref|XP_006407583.1| hypothetical protein EUTSA_v100213350mg, par... 154 2e-35
ref|XP_006660890.1| PREDICTED: transcription initiation factor I... 154 2e-35
ref|XP_006421305.1| hypothetical protein CICLE_v10005479mg [Citr... 154 2e-35
ref|XP_006421304.1| hypothetical protein CICLE_v10005479mg [Citr... 154 2e-35
>gb|EOY09191.1| Cyclin-like family protein isoform 2, partial [Theobroma cacao]
Length = 248
Score = 145 bits (367), Expect(2) = 8e-56
Identities = 73/109 (66%), Positives = 87/109 (79%)
Frame = +2
Query: 332 EICSIANGASKKEIGRAKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMNHEEIKV 511
EICS+ANGA+KKEIGRAKE+IVKQL +E G+S+EMGTIHAGD++RRFCSNLGMN++ +K
Sbjct: 141 EICSVANGATKKEIGRAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKA 200
Query: 512 VQETVQKAEEFDXXXXXXXXXXXXXYMVTQLSDSKKPILRDISVATTVA 658
QE VQK+EEFD Y++TQLSD KKP LRDISVAT VA
Sbjct: 201 AQEAVQKSEEFDIRRSPISIAAAVIYIITQLSDDKKP-LRDISVATGVA 248
Score = 98.2 bits (243), Expect(2) = 8e-56
Identities = 50/75 (66%), Positives = 62/75 (82%), Gaps = 3/75 (4%)
Frame = +3
Query: 3 PVNPLLADAGLSTVISKGPNGSNGD---GSLARLQNRGGDPDRAIVLAFKAIATMADRLS 173
P NPLLAD GLSTVI+K PNG++G+ SL R QNRG +PDR ++LAFK IATM+DRL
Sbjct: 62 PTNPLLADGGLSTVIAK-PNGASGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120
Query: 174 LVSTIRDRASEIYKR 218
LV+TI+DRA+EIYK+
Sbjct: 121 LVATIKDRANEIYKK 135
>ref|XP_006351254.1| PREDICTED: transcription initiation factor IIB-2-like isoform X2
[Solanum tuberosum]
Length = 312
Score = 204 bits (519), Expect = 2e-50
Identities = 103/106 (97%), Positives = 103/106 (97%)
Frame = +3
Query: 3 PVNPLLADAGLSTVISKGPNGSNGDGSLARLQNRGGDPDRAIVLAFKAIATMADRLSLVS 182
PVNPLL DA LSTVISKGPNGSNGDGSLARLQNRGGDPDRAIVLAFKAIATMADRLSLVS
Sbjct: 61 PVNPLLGDAALSTVISKGPNGSNGDGSLARLQNRGGDPDRAIVLAFKAIATMADRLSLVS 120
Query: 183 TIRDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQESKPRTVK 320
TIRDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQE KPRTVK
Sbjct: 121 TIRDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQEGKPRTVK 166
Score = 191 bits (485), Expect = 2e-46
Identities = 106/154 (68%), Positives = 111/154 (72%), Gaps = 10/154 (6%)
Frame = +2
Query: 230 EVYKRQES*CFGR----------CLYLHCLSSRKQTTHCKXXXXEICSIANGASKKEIGR 379
E+YKR E R C+Y+ C K T EICSIANGASKKEIGR
Sbjct: 128 EIYKRLEDQKCTRGRNLDALVAACIYIACRQEGKPRT-----VKEICSIANGASKKEIGR 182
Query: 380 AKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMNHEEIKVVQETVQKAEEFDXXXX 559
AKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMNHEEIKVVQETVQKAEEFD
Sbjct: 183 AKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMNHEEIKVVQETVQKAEEFDIRRS 242
Query: 560 XXXXXXXXXYMVTQLSDSKKPILRDISVATTVAE 661
YM+TQLSDSKKP+LRDISVATTVAE
Sbjct: 243 PISIAAAIIYMITQLSDSKKPVLRDISVATTVAE 276
>ref|XP_006351253.1| PREDICTED: transcription initiation factor IIB-2-like isoform X1
[Solanum tuberosum]
Length = 313
Score = 204 bits (519), Expect = 2e-50
Identities = 103/106 (97%), Positives = 103/106 (97%)
Frame = +3
Query: 3 PVNPLLADAGLSTVISKGPNGSNGDGSLARLQNRGGDPDRAIVLAFKAIATMADRLSLVS 182
PVNPLL DA LSTVISKGPNGSNGDGSLARLQNRGGDPDRAIVLAFKAIATMADRLSLVS
Sbjct: 61 PVNPLLGDAALSTVISKGPNGSNGDGSLARLQNRGGDPDRAIVLAFKAIATMADRLSLVS 120
Query: 183 TIRDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQESKPRTVK 320
TIRDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQE KPRTVK
Sbjct: 121 TIRDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQEGKPRTVK 166
Score = 186 bits (473), Expect = 4e-45
Identities = 106/155 (68%), Positives = 111/155 (71%), Gaps = 11/155 (7%)
Frame = +2
Query: 230 EVYKRQES*CFGR----------CLYLHCLSSRKQTTHCKXXXXEICSIANGASKKEIGR 379
E+YKR E R C+Y+ C K T EICSIANGASKKEIGR
Sbjct: 128 EIYKRLEDQKCTRGRNLDALVAACIYIACRQEGKPRT-----VKEICSIANGASKKEIGR 182
Query: 380 AKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMNHEEIKVVQETVQKAEEFDXXXX 559
AKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMNHEEIKVVQETVQKAEEFD
Sbjct: 183 AKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMNHEEIKVVQETVQKAEEFDIRRS 242
Query: 560 XXXXXXXXXYMVTQLSDSKKPILR-DISVATTVAE 661
YM+TQLSDSKKP+LR DISVATTVAE
Sbjct: 243 PISIAAAIIYMITQLSDSKKPVLRADISVATTVAE 277
>ref|XP_004249217.1| PREDICTED: transcription initiation factor IIB-2-like [Solanum
lycopersicum]
Length = 313
Score = 204 bits (519), Expect = 2e-50
Identities = 103/106 (97%), Positives = 103/106 (97%)
Frame = +3
Query: 3 PVNPLLADAGLSTVISKGPNGSNGDGSLARLQNRGGDPDRAIVLAFKAIATMADRLSLVS 182
PVNPLL DA LSTVISKGPNGSNGDGSLARLQNRGGDPDRAIVLAFKAIATMADRLSLVS
Sbjct: 61 PVNPLLGDAALSTVISKGPNGSNGDGSLARLQNRGGDPDRAIVLAFKAIATMADRLSLVS 120
Query: 183 TIRDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQESKPRTVK 320
TIRDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQE KPRTVK
Sbjct: 121 TIRDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQEGKPRTVK 166
Score = 186 bits (473), Expect = 4e-45
Identities = 106/155 (68%), Positives = 111/155 (71%), Gaps = 11/155 (7%)
Frame = +2
Query: 230 EVYKRQES*CFGR----------CLYLHCLSSRKQTTHCKXXXXEICSIANGASKKEIGR 379
E+YKR E R C+Y+ C K T EICSIANGASKKEIGR
Sbjct: 128 EIYKRLEDQKCTRGRNLDALVAACIYIACRQEGKPRT-----VKEICSIANGASKKEIGR 182
Query: 380 AKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMNHEEIKVVQETVQKAEEFDXXXX 559
AKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMNHEEIKVVQETVQKAEEFD
Sbjct: 183 AKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMNHEEIKVVQETVQKAEEFDIRRS 242
Query: 560 XXXXXXXXXYMVTQLSDSKKPILR-DISVATTVAE 661
YM+TQLSDSKKP+LR DISVATTVAE
Sbjct: 243 PISIAAAIIYMITQLSDSKKPVLRADISVATTVAE 277
>ref|XP_006351306.1| PREDICTED: transcription initiation factor IIB-2-like [Solanum
tuberosum]
Length = 312
Score = 193 bits (491), Expect = 3e-47
Identities = 96/106 (90%), Positives = 100/106 (94%)
Frame = +3
Query: 3 PVNPLLADAGLSTVISKGPNGSNGDGSLARLQNRGGDPDRAIVLAFKAIATMADRLSLVS 182
PVNPLL D GLSTVISKGPNGSNGD SLARLQNRGGDP+RA+V+AFKAIA MADRLSLVS
Sbjct: 62 PVNPLLGDVGLSTVISKGPNGSNGDSSLARLQNRGGDPERALVMAFKAIANMADRLSLVS 121
Query: 183 TIRDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQESKPRTVK 320
TI+DRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQE K RTVK
Sbjct: 122 TIKDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQEGKARTVK 167
Score = 176 bits (445), Expect = 7e-42
Identities = 98/154 (63%), Positives = 109/154 (70%), Gaps = 10/154 (6%)
Frame = +2
Query: 230 EVYKRQES*CFGR----------CLYLHCLSSRKQTTHCKXXXXEICSIANGASKKEIGR 379
E+YKR E R C+Y+ C K T EICSIANGA+KKEIGR
Sbjct: 129 EIYKRLEDQKCTRGRNLDALVAACIYIACRQEGKART-----VKEICSIANGATKKEIGR 183
Query: 380 AKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMNHEEIKVVQETVQKAEEFDXXXX 559
AKEFIVKQLKVEMG+SMEMGTIHAGDYLRRFCSN+GMNHEEIK VQETV+K+EEFD
Sbjct: 184 AKEFIVKQLKVEMGDSMEMGTIHAGDYLRRFCSNIGMNHEEIKAVQETVKKSEEFDIRRS 243
Query: 560 XXXXXXXXXYMVTQLSDSKKPILRDISVATTVAE 661
YM+TQL+DSKKP LRDIS+ATTVAE
Sbjct: 244 PISIAAAIIYMLTQLTDSKKP-LRDISIATTVAE 276
>ref|XP_004249253.1| PREDICTED: transcription initiation factor IIB-2-like [Solanum
lycopersicum]
Length = 312
Score = 193 bits (491), Expect = 3e-47
Identities = 96/106 (90%), Positives = 100/106 (94%)
Frame = +3
Query: 3 PVNPLLADAGLSTVISKGPNGSNGDGSLARLQNRGGDPDRAIVLAFKAIATMADRLSLVS 182
PVNPLL D GLSTVISKGPNGSNGD SLARLQNRGGDP+RA+V+AFKAIA MADRLSLVS
Sbjct: 62 PVNPLLGDVGLSTVISKGPNGSNGDSSLARLQNRGGDPERALVMAFKAIANMADRLSLVS 121
Query: 183 TIRDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQESKPRTVK 320
TI+DRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQE K RTVK
Sbjct: 122 TIKDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQEGKARTVK 167
Score = 176 bits (445), Expect = 7e-42
Identities = 98/154 (63%), Positives = 109/154 (70%), Gaps = 10/154 (6%)
Frame = +2
Query: 230 EVYKRQES*CFGR----------CLYLHCLSSRKQTTHCKXXXXEICSIANGASKKEIGR 379
E+YKR E R C+Y+ C K T EICSIANGA+KKEIGR
Sbjct: 129 EIYKRLEDQKCTRGRNLDALVAACIYIACRQEGKART-----VKEICSIANGATKKEIGR 183
Query: 380 AKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMNHEEIKVVQETVQKAEEFDXXXX 559
AKEFIVKQLKVEMG+SMEMGTIHAGDYLRRFCSN+GMNHEEIK VQETV+K+EEFD
Sbjct: 184 AKEFIVKQLKVEMGDSMEMGTIHAGDYLRRFCSNIGMNHEEIKAVQETVKKSEEFDIRRS 243
Query: 560 XXXXXXXXXYMVTQLSDSKKPILRDISVATTVAE 661
YM+TQL+DSKKP LRDIS+ATTVAE
Sbjct: 244 PISIAAAIIYMLTQLTDSKKP-LRDISIATTVAE 276
>gb|EPS61179.1| hypothetical protein M569_13619, partial [Genlisea aurea]
Length = 211
Score = 184 bits (468), Expect = 2e-44
Identities = 92/106 (86%), Positives = 97/106 (91%)
Frame = +3
Query: 3 PVNPLLADAGLSTVISKGPNGSNGDGSLARLQNRGGDPDRAIVLAFKAIATMADRLSLVS 182
PVNPLLADA LSTVIS+G GSNGD SLARLQNRG DPDRAIVLAFK I+ MADRLSLV+
Sbjct: 62 PVNPLLADAALSTVISRGAGGSNGDASLARLQNRGSDPDRAIVLAFKTISNMADRLSLVT 121
Query: 183 TIRDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQESKPRTVK 320
TI+DRASEIYKRLEDQKCTRGRNL+ALVA CIYIACRQE KPRTVK
Sbjct: 122 TIKDRASEIYKRLEDQKCTRGRNLEALVAGCIYIACRQEGKPRTVK 167
Score = 89.0 bits (219), Expect = 1e-15
Identities = 51/88 (57%), Positives = 56/88 (63%), Gaps = 10/88 (11%)
Frame = +2
Query: 230 EVYKRQES*CFGR----------CLYLHCLSSRKQTTHCKXXXXEICSIANGASKKEIGR 379
E+YKR E R C+Y+ C K T EICS+ GA+KKEIGR
Sbjct: 129 EIYKRLEDQKCTRGRNLEALVAGCIYIACRQEGKPRT-----VKEICSVVAGATKKEIGR 183
Query: 380 AKEFIVKQLKVEMGESMEMGTIHAGDYL 463
AKEFIVKQLKVEMGESMEMGTIHAGDYL
Sbjct: 184 AKEFIVKQLKVEMGESMEMGTIHAGDYL 211
>ref|XP_006298174.1| hypothetical protein CARUB_v10014225mg [Capsella rubella]
gi|482566883|gb|EOA31072.1| hypothetical protein
CARUB_v10014225mg [Capsella rubella]
Length = 277
Score = 158 bits (399), Expect = 2e-36
Identities = 80/109 (73%), Positives = 93/109 (85%), Gaps = 3/109 (2%)
Frame = +3
Query: 3 PVNPLLADAGLSTVISKGPNGSNGD---GSLARLQNRGGDPDRAIVLAFKAIATMADRLS 173
P NPLLAD GL+TVISK PNGS+GD SL R QNRG +PDR +++AFK IATMADRL
Sbjct: 62 PTNPLLADGGLTTVISK-PNGSSGDFLSSSLGRWQNRGSNPDRGLIVAFKTIATMADRLG 120
Query: 174 LVSTIRDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQESKPRTVK 320
LV+TI+DRA+EIYKR+EDQK +RGRN DAL+AAC+YIACRQE KPRTVK
Sbjct: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVK 169
Score = 140 bits (352), Expect = 4e-31
Identities = 74/142 (52%), Positives = 92/142 (64%), Gaps = 10/142 (7%)
Frame = +2
Query: 230 EVYKRQES*CFGR----------CLYLHCLSSRKQTTHCKXXXXEICSIANGASKKEIGR 379
E+YKR E R CLY+ C K T EICS+ANGA+KKEIGR
Sbjct: 131 EIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRT-----VKEICSVANGATKKEIGR 185
Query: 380 AKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMNHEEIKVVQETVQKAEEFDXXXX 559
AKE+IVKQL +E G+S+EMGTIHAGD++RRFCSNLGM ++ +K QE+VQK+EEFD
Sbjct: 186 AKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMTNQTVKAAQESVQKSEEFDIRRS 245
Query: 560 XXXXXXXXXYMVTQLSDSKKPI 625
Y++TQLSD KKP+
Sbjct: 246 PISIAAAVIYIITQLSDEKKPL 267
>ref|XP_006289549.1| hypothetical protein CARUB_v10003094mg [Capsella rubella]
gi|482558255|gb|EOA22447.1| hypothetical protein
CARUB_v10003094mg [Capsella rubella]
Length = 312
Score = 158 bits (399), Expect = 2e-36
Identities = 80/109 (73%), Positives = 93/109 (85%), Gaps = 3/109 (2%)
Frame = +3
Query: 3 PVNPLLADAGLSTVISKGPNGSNGD---GSLARLQNRGGDPDRAIVLAFKAIATMADRLS 173
P NPLLAD GL+TVISK PNGS+GD SL R QNRG +PDR +++AFK IATMADRL
Sbjct: 62 PTNPLLADGGLTTVISK-PNGSSGDFLSSSLGRWQNRGSNPDRGLIVAFKTIATMADRLG 120
Query: 174 LVSTIRDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQESKPRTVK 320
LV+TI+DRA+EIYKR+EDQK +RGRN DAL+AAC+YIACRQE KPRTVK
Sbjct: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVK 169
Score = 150 bits (379), Expect = 3e-34
Identities = 83/154 (53%), Positives = 102/154 (66%), Gaps = 10/154 (6%)
Frame = +2
Query: 230 EVYKRQES*CFGR----------CLYLHCLSSRKQTTHCKXXXXEICSIANGASKKEIGR 379
E+YKR E R CLY+ C K T EICS+ANGA+KKEIGR
Sbjct: 131 EIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRT-----VKEICSVANGATKKEIGR 185
Query: 380 AKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMNHEEIKVVQETVQKAEEFDXXXX 559
AKE+I+KQL +E G+S+EMGTIHAGD++RRFCSNLGM ++ +K QE+VQK+EEFD
Sbjct: 186 AKEYIIKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMGNQTVKAAQESVQKSEEFDIRRS 245
Query: 560 XXXXXXXXXYMVTQLSDSKKPILRDISVATTVAE 661
Y++TQLSD KK +LRDISVAT VAE
Sbjct: 246 PISIAAAVIYIITQLSDDKK-LLRDISVATGVAE 278
>emb|CAA84309.1| AtTFIIB2 [Arabidopsis thaliana]
Length = 301
Score = 158 bits (399), Expect = 2e-36
Identities = 80/109 (73%), Positives = 93/109 (85%), Gaps = 3/109 (2%)
Frame = +3
Query: 3 PVNPLLADAGLSTVISKGPNGSNGD---GSLARLQNRGGDPDRAIVLAFKAIATMADRLS 173
P NPLLAD GL+TVISK PNGS+GD SL R QNRG +PDR +++AFK IATMADRL
Sbjct: 51 PTNPLLADGGLTTVISK-PNGSSGDFLSSSLGRWQNRGSNPDRGLIVAFKTIATMADRLG 109
Query: 174 LVSTIRDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQESKPRTVK 320
LV+TI+DRA+EIYKR+EDQK +RGRN DAL+AAC+YIACRQE KPRTVK
Sbjct: 110 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVK 158
Score = 150 bits (379), Expect = 3e-34
Identities = 84/154 (54%), Positives = 101/154 (65%), Gaps = 10/154 (6%)
Frame = +2
Query: 230 EVYKRQES*CFGR----------CLYLHCLSSRKQTTHCKXXXXEICSIANGASKKEIGR 379
E+YKR E R CLY+ C K T EICS+ANGA+KKEIGR
Sbjct: 120 EIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRT-----VKEICSVANGATKKEIGR 174
Query: 380 AKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMNHEEIKVVQETVQKAEEFDXXXX 559
AKE+IVKQL +E G+ +EMGTIHAGD++RRFCSNLGM ++ +K QE+VQK+EEFD
Sbjct: 175 AKEYIVKQLGLETGQLVEMGTIHAGDFMRRFCSNLGMTNQTVKAAQESVQKSEEFDIRRS 234
Query: 560 XXXXXXXXXYMVTQLSDSKKPILRDISVATTVAE 661
Y++TQLSD KKP LRDISVAT VAE
Sbjct: 235 PISIAAAVIYIITQLSDEKKP-LRDISVATGVAE 267
>ref|NP_187644.1| transcription initiation factor IIB-2 [Arabidopsis thaliana]
gi|21363045|sp|Q9SS44.1|TF2B2_ARATH RecName:
Full=Transcription initiation factor IIB-2; AltName:
Full=General transcription factor TFIIB-2;
Short=AtTFIIB2 gi|6056193|gb|AAF02810.1|AC009400_6
transcription initiation factor IIB (TFIIB) [Arabidopsis
thaliana] gi|15215784|gb|AAK91437.1| AT3g10330/F14P13_7
[Arabidopsis thaliana] gi|16974427|gb|AAL31139.1|
AT3g10330/F14P13_7 [Arabidopsis thaliana]
gi|21593436|gb|AAM65403.1| transcription initiation
factor IIB (TFIIB) [Arabidopsis thaliana]
gi|39545880|gb|AAR28003.1| TFIIB2 [Arabidopsis thaliana]
gi|332641371|gb|AEE74892.1| transcription initiation
factor IIB-2 [Arabidopsis thaliana]
Length = 312
Score = 158 bits (399), Expect = 2e-36
Identities = 80/109 (73%), Positives = 93/109 (85%), Gaps = 3/109 (2%)
Frame = +3
Query: 3 PVNPLLADAGLSTVISKGPNGSNGD---GSLARLQNRGGDPDRAIVLAFKAIATMADRLS 173
P NPLLAD GL+TVISK PNGS+GD SL R QNRG +PDR +++AFK IATMADRL
Sbjct: 62 PTNPLLADGGLTTVISK-PNGSSGDFLSSSLGRWQNRGSNPDRGLIVAFKTIATMADRLG 120
Query: 174 LVSTIRDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQESKPRTVK 320
LV+TI+DRA+EIYKR+EDQK +RGRN DAL+AAC+YIACRQE KPRTVK
Sbjct: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVK 169
Score = 150 bits (379), Expect = 3e-34
Identities = 84/154 (54%), Positives = 101/154 (65%), Gaps = 10/154 (6%)
Frame = +2
Query: 230 EVYKRQES*CFGR----------CLYLHCLSSRKQTTHCKXXXXEICSIANGASKKEIGR 379
E+YKR E R CLY+ C K T EICS+ANGA+KKEIGR
Sbjct: 131 EIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRT-----VKEICSVANGATKKEIGR 185
Query: 380 AKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMNHEEIKVVQETVQKAEEFDXXXX 559
AKE+IVKQL +E G+ +EMGTIHAGD++RRFCSNLGM ++ +K QE+VQK+EEFD
Sbjct: 186 AKEYIVKQLGLETGQLVEMGTIHAGDFMRRFCSNLGMTNQTVKAAQESVQKSEEFDIRRS 245
Query: 560 XXXXXXXXXYMVTQLSDSKKPILRDISVATTVAE 661
Y++TQLSD KKP LRDISVAT VAE
Sbjct: 246 PISIAAAVIYIITQLSDEKKP-LRDISVATGVAE 278
>ref|XP_002882661.1| transcription initiation factor IIB-2 [Arabidopsis lyrata subsp.
lyrata] gi|565481070|ref|XP_006298175.1| hypothetical
protein CARUB_v10014225mg [Capsella rubella]
gi|297328501|gb|EFH58920.1| transcription initiation
factor IIB-2 [Arabidopsis lyrata subsp. lyrata]
gi|482566884|gb|EOA31073.1| hypothetical protein
CARUB_v10014225mg [Capsella rubella]
Length = 312
Score = 158 bits (399), Expect = 2e-36
Identities = 80/109 (73%), Positives = 93/109 (85%), Gaps = 3/109 (2%)
Frame = +3
Query: 3 PVNPLLADAGLSTVISKGPNGSNGD---GSLARLQNRGGDPDRAIVLAFKAIATMADRLS 173
P NPLLAD GL+TVISK PNGS+GD SL R QNRG +PDR +++AFK IATMADRL
Sbjct: 62 PTNPLLADGGLTTVISK-PNGSSGDFLSSSLGRWQNRGSNPDRGLIVAFKTIATMADRLG 120
Query: 174 LVSTIRDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQESKPRTVK 320
LV+TI+DRA+EIYKR+EDQK +RGRN DAL+AAC+YIACRQE KPRTVK
Sbjct: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVK 169
Score = 152 bits (385), Expect = 7e-35
Identities = 85/154 (55%), Positives = 102/154 (66%), Gaps = 10/154 (6%)
Frame = +2
Query: 230 EVYKRQES*CFGR----------CLYLHCLSSRKQTTHCKXXXXEICSIANGASKKEIGR 379
E+YKR E R CLY+ C K T EICS+ANGA+KKEIGR
Sbjct: 131 EIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRT-----VKEICSVANGATKKEIGR 185
Query: 380 AKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMNHEEIKVVQETVQKAEEFDXXXX 559
AKE+IVKQL +E G+S+EMGTIHAGD++RRFCSNLGM ++ +K QE+VQK+EEFD
Sbjct: 186 AKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMTNQTVKAAQESVQKSEEFDIRRS 245
Query: 560 XXXXXXXXXYMVTQLSDSKKPILRDISVATTVAE 661
Y++TQLSD KKP LRDISVAT VAE
Sbjct: 246 PISIAAAVIYIITQLSDEKKP-LRDISVATGVAE 278
>gb|ESW17584.1| hypothetical protein PHAVU_007G251400g [Phaseolus vulgaris]
Length = 312
Score = 155 bits (392), Expect = 1e-35
Identities = 79/109 (72%), Positives = 92/109 (84%), Gaps = 3/109 (2%)
Frame = +3
Query: 3 PVNPLLADAGLSTVISKGPNGSNGD---GSLARLQNRGGDPDRAIVLAFKAIATMADRLS 173
P NPLL D GLSTVI+K PNGS G+ SL R QNRG +PDRA++LAFK IATM+DRL
Sbjct: 62 PSNPLLTDGGLSTVIAK-PNGSGGEFLSSSLGRWQNRGSNPDRALILAFKTIATMSDRLG 120
Query: 174 LVSTIRDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQESKPRTVK 320
LV+TI+DRA+EIYKR+EDQK +RGRN DAL+AAC+YIACRQE KPRTVK
Sbjct: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVK 169
Score = 152 bits (384), Expect = 9e-35
Identities = 83/154 (53%), Positives = 102/154 (66%), Gaps = 10/154 (6%)
Frame = +2
Query: 230 EVYKRQES*CFGR----------CLYLHCLSSRKQTTHCKXXXXEICSIANGASKKEIGR 379
E+YKR E R CLY+ C K T EICS+ANGA+KKE+GR
Sbjct: 131 EIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRT-----VKEICSVANGATKKEVGR 185
Query: 380 AKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMNHEEIKVVQETVQKAEEFDXXXX 559
AKE+IVKQL +E G+S+EMGTIHAGD++RRFCSNLGMN++ +K QE VQK+EEFD
Sbjct: 186 AKEYIVKQLGLENGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQKSEEFDIRRS 245
Query: 560 XXXXXXXXXYMVTQLSDSKKPILRDISVATTVAE 661
Y++TQLSD KKP L+DIS+AT VAE
Sbjct: 246 PISIAAAVIYIITQLSDDKKP-LKDISIATGVAE 278
>ref|XP_004304334.1| PREDICTED: transcription initiation factor IIB-like [Fragaria vesca
subsp. vesca]
Length = 312
Score = 155 bits (392), Expect = 1e-35
Identities = 78/109 (71%), Positives = 93/109 (85%), Gaps = 3/109 (2%)
Frame = +3
Query: 3 PVNPLLADAGLSTVISKGPNGSNGD---GSLARLQNRGGDPDRAIVLAFKAIATMADRLS 173
P NPLLAD GLSTVI+K PNG++G+ SL R QNRG +PDR ++LAFK IATM+DRL
Sbjct: 62 PTNPLLADGGLSTVIAK-PNGASGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120
Query: 174 LVSTIRDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQESKPRTVK 320
LV+TI+DRA+EIYKR+EDQK +RGRN DAL+AAC+YIACRQE KPRTVK
Sbjct: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVK 169
Score = 152 bits (384), Expect = 9e-35
Identities = 84/154 (54%), Positives = 102/154 (66%), Gaps = 10/154 (6%)
Frame = +2
Query: 230 EVYKRQES*CFGR----------CLYLHCLSSRKQTTHCKXXXXEICSIANGASKKEIGR 379
E+YKR E R CLY+ C K T EICS+ANGA+KKEIGR
Sbjct: 131 EIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRT-----VKEICSVANGATKKEIGR 185
Query: 380 AKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMNHEEIKVVQETVQKAEEFDXXXX 559
AKE+IVKQL +E G+S+EMGTIHAGD++RRFCSNLGMN++ +K QE VQK+EEFD
Sbjct: 186 AKEYIVKQLGLEKGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQKSEEFDIRRS 245
Query: 560 XXXXXXXXXYMVTQLSDSKKPILRDISVATTVAE 661
Y++TQLSD KKP L+DIS+AT VAE
Sbjct: 246 PISIAAAVIYIITQLSDDKKP-LKDISLATGVAE 278
>gb|EMJ03476.1| hypothetical protein PRUPE_ppa008972mg [Prunus persica]
Length = 312
Score = 155 bits (392), Expect = 1e-35
Identities = 78/109 (71%), Positives = 93/109 (85%), Gaps = 3/109 (2%)
Frame = +3
Query: 3 PVNPLLADAGLSTVISKGPNGSNGD---GSLARLQNRGGDPDRAIVLAFKAIATMADRLS 173
P NPLLAD GLSTVI+K PNG++G+ SL R QNRG +PDR ++LAFK IATM+DRL
Sbjct: 62 PTNPLLADGGLSTVIAK-PNGASGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120
Query: 174 LVSTIRDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQESKPRTVK 320
LV+TI+DRA+EIYKR+EDQK +RGRN DAL+AAC+YIACRQE KPRTVK
Sbjct: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVK 169
Score = 154 bits (390), Expect = 2e-35
Identities = 86/154 (55%), Positives = 102/154 (66%), Gaps = 10/154 (6%)
Frame = +2
Query: 230 EVYKRQES*CFGR----------CLYLHCLSSRKQTTHCKXXXXEICSIANGASKKEIGR 379
E+YKR E R CLY+ C K T EICS+ANGASKKEIGR
Sbjct: 131 EIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRT-----VKEICSVANGASKKEIGR 185
Query: 380 AKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMNHEEIKVVQETVQKAEEFDXXXX 559
AKE+IVKQL +E G+S+EMGTIHAGD++RRFCSNLGMN++ +K QE VQK+EEFD
Sbjct: 186 AKEYIVKQLGLEKGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQKSEEFDIRRS 245
Query: 560 XXXXXXXXXYMVTQLSDSKKPILRDISVATTVAE 661
Y++TQLSD KKP L+DISVAT VAE
Sbjct: 246 PISIAAAVIYIITQLSDDKKP-LKDISVATGVAE 278
>ref|XP_004150610.1| PREDICTED: transcription initiation factor IIB-2-like [Cucumis
sativus] gi|449529834|ref|XP_004171903.1| PREDICTED:
transcription initiation factor IIB-2-like [Cucumis
sativus]
Length = 312
Score = 155 bits (391), Expect = 1e-35
Identities = 78/109 (71%), Positives = 92/109 (84%), Gaps = 3/109 (2%)
Frame = +3
Query: 3 PVNPLLADAGLSTVISKGPNGSNGD---GSLARLQNRGGDPDRAIVLAFKAIATMADRLS 173
P NPLLAD GLSTVI+K PNG+ G+ SL R QNRG +PDR ++LAFK IATM+DRL
Sbjct: 62 PTNPLLADGGLSTVIAK-PNGTTGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120
Query: 174 LVSTIRDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQESKPRTVK 320
LV+TI+DRA+EIYKR+EDQK +RGRN DAL+AAC+YIACRQE KPRTVK
Sbjct: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVK 169
Score = 153 bits (387), Expect = 4e-35
Identities = 85/154 (55%), Positives = 102/154 (66%), Gaps = 10/154 (6%)
Frame = +2
Query: 230 EVYKRQES*CFGR----------CLYLHCLSSRKQTTHCKXXXXEICSIANGASKKEIGR 379
E+YKR E R CLY+ C K T EICS+ANGA+KKEIGR
Sbjct: 131 EIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRT-----VKEICSVANGATKKEIGR 185
Query: 380 AKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMNHEEIKVVQETVQKAEEFDXXXX 559
AKE+IVKQL +E G+S+EMGTIHAGD++RRFCSNLGMN++ +K QE VQK+EEFD
Sbjct: 186 AKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQKSEEFDIRRS 245
Query: 560 XXXXXXXXXYMVTQLSDSKKPILRDISVATTVAE 661
Y++TQLSD KKP L+DISVAT VAE
Sbjct: 246 PISIAAAVIYIITQLSDDKKP-LKDISVATGVAE 278
>ref|XP_006407583.1| hypothetical protein EUTSA_v100213350mg, partial [Eutrema
salsugineum] gi|557108729|gb|ESQ49036.1| hypothetical
protein EUTSA_v100213350mg, partial [Eutrema
salsugineum]
Length = 167
Score = 154 bits (390), Expect = 2e-35
Identities = 78/107 (72%), Positives = 91/107 (85%), Gaps = 3/107 (2%)
Frame = +3
Query: 3 PVNPLLADAGLSTVISKGPNGSNGD---GSLARLQNRGGDPDRAIVLAFKAIATMADRLS 173
P NPLLAD GL+TVISK PNGS+GD SL R QNRG +PDR +++AFK IATMADRL
Sbjct: 62 PTNPLLADGGLTTVISK-PNGSSGDFLSSSLGRWQNRGSNPDRGLIVAFKTIATMADRLG 120
Query: 174 LVSTIRDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQESKPRT 314
LV+TI+DRA+EIYKR+EDQK +RGRN DAL+AAC+YIACRQE KPRT
Sbjct: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRT 167
>ref|XP_006660890.1| PREDICTED: transcription initiation factor IIB-like [Oryza
brachyantha]
Length = 312
Score = 154 bits (389), Expect = 2e-35
Identities = 81/140 (57%), Positives = 97/140 (69%)
Frame = +2
Query: 242 RQES*CFGRCLYLHCLSSRKQTTHCKXXXXEICSIANGASKKEIGRAKEFIVKQLKVEMG 421
R + CLY+ C + T EICS+ANGA+KKEIGRAKEFIVKQL+VEMG
Sbjct: 145 RNQDAILAACLYIACRQEDRPRT-----VKEICSVANGATKKEIGRAKEFIVKQLEVEMG 199
Query: 422 ESMEMGTIHAGDYLRRFCSNLGMNHEEIKVVQETVQKAEEFDXXXXXXXXXXXXXYMVTQ 601
+SMEMGTIHAGD+LRRFCS LGMN++ +K QE VQ++EE D YM+TQ
Sbjct: 200 QSMEMGTIHAGDFLRRFCSTLGMNNQAVKAAQEAVQRSEELDIRRSPISIAAAVIYMITQ 259
Query: 602 LSDSKKPILRDISVATTVAE 661
LSD KKP L+DIS+AT VAE
Sbjct: 260 LSDDKKP-LKDISLATGVAE 278
Score = 145 bits (366), Expect = 1e-32
Identities = 72/109 (66%), Positives = 89/109 (81%), Gaps = 3/109 (2%)
Frame = +3
Query: 3 PVNPLLADAGLSTVISKGPNGSNGD---GSLARLQNRGGDPDRAIVLAFKAIATMADRLS 173
P NPLL D GLSTVI+K PNG+ G+ SL R QNRG +PDR+++LAF+ IA MADRL
Sbjct: 62 PTNPLLTDGGLSTVIAK-PNGAQGEFLSSSLGRWQNRGSNPDRSLILAFRTIANMADRLG 120
Query: 174 LVSTIRDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQESKPRTVK 320
LV+TI+DRA+EIYK++ED K RGRN DA++AAC+YIACRQE +PRTVK
Sbjct: 121 LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVK 169
>ref|XP_006421305.1| hypothetical protein CICLE_v10005479mg [Citrus clementina]
gi|557523178|gb|ESR34545.1| hypothetical protein
CICLE_v10005479mg [Citrus clementina]
Length = 245
Score = 154 bits (389), Expect = 2e-35
Identities = 77/109 (70%), Positives = 93/109 (85%), Gaps = 3/109 (2%)
Frame = +3
Query: 3 PVNPLLADAGLSTVISKGPNGSNGD---GSLARLQNRGGDPDRAIVLAFKAIATMADRLS 173
P NPLLAD GLSTVI+K PNG++G+ SL R QNRG +PDR ++LAFK IATM+DRL
Sbjct: 62 PTNPLLADGGLSTVIAK-PNGASGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120
Query: 174 LVSTIRDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQESKPRTVK 320
LV+TI+DRA+EIYK++EDQK +RGRN DAL+AAC+YIACRQE KPRTVK
Sbjct: 121 LVATIKDRANEIYKKVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVK 169
Score = 125 bits (314), Expect = 1e-26
Identities = 61/102 (59%), Positives = 75/102 (73%)
Frame = +2
Query: 242 RQES*CFGRCLYLHCLSSRKQTTHCKXXXXEICSIANGASKKEIGRAKEFIVKQLKVEMG 421
R + CLY+ C K T EICS+ANGA+KKEIGRAKE+IVKQL +E G
Sbjct: 145 RNQDALLAACLYIACRQEDKPRT-----VKEICSVANGATKKEIGRAKEYIVKQLGLETG 199
Query: 422 ESMEMGTIHAGDYLRRFCSNLGMNHEEIKVVQETVQKAEEFD 547
+S+EMGTIHAGD++RRFCSNLGMN++ +K QE VQK+EEFD
Sbjct: 200 QSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQKSEEFD 241
>ref|XP_006421304.1| hypothetical protein CICLE_v10005479mg [Citrus clementina]
gi|568880032|ref|XP_006492943.1| PREDICTED:
transcription initiation factor IIB-2-like [Citrus
sinensis] gi|557523177|gb|ESR34544.1| hypothetical
protein CICLE_v10005479mg [Citrus clementina]
Length = 312
Score = 154 bits (389), Expect = 2e-35
Identities = 77/109 (70%), Positives = 93/109 (85%), Gaps = 3/109 (2%)
Frame = +3
Query: 3 PVNPLLADAGLSTVISKGPNGSNGD---GSLARLQNRGGDPDRAIVLAFKAIATMADRLS 173
P NPLLAD GLSTVI+K PNG++G+ SL R QNRG +PDR ++LAFK IATM+DRL
Sbjct: 62 PTNPLLADGGLSTVIAK-PNGASGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120
Query: 174 LVSTIRDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQESKPRTVK 320
LV+TI+DRA+EIYK++EDQK +RGRN DAL+AAC+YIACRQE KPRTVK
Sbjct: 121 LVATIKDRANEIYKKVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVK 169
Score = 152 bits (385), Expect = 7e-35
Identities = 80/140 (57%), Positives = 97/140 (69%)
Frame = +2
Query: 242 RQES*CFGRCLYLHCLSSRKQTTHCKXXXXEICSIANGASKKEIGRAKEFIVKQLKVEMG 421
R + CLY+ C K T EICS+ANGA+KKEIGRAKE+IVKQL +E G
Sbjct: 145 RNQDALLAACLYIACRQEDKPRT-----VKEICSVANGATKKEIGRAKEYIVKQLGLETG 199
Query: 422 ESMEMGTIHAGDYLRRFCSNLGMNHEEIKVVQETVQKAEEFDXXXXXXXXXXXXXYMVTQ 601
+S+EMGTIHAGD++RRFCSNLGMN++ +K QE VQK+EEFD Y++TQ
Sbjct: 200 QSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQKSEEFDIRRSPISIAAAVIYIITQ 259
Query: 602 LSDSKKPILRDISVATTVAE 661
LSD KKP L+DISVAT VAE
Sbjct: 260 LSDDKKP-LKDISVATGVAE 278