BLASTX nr result

ID: Atropa21_contig00000324 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00000324
         (663 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY09191.1| Cyclin-like family protein isoform 2, partial [Th...   145   8e-56
ref|XP_006351254.1| PREDICTED: transcription initiation factor I...   204   2e-50
ref|XP_006351253.1| PREDICTED: transcription initiation factor I...   204   2e-50
ref|XP_004249217.1| PREDICTED: transcription initiation factor I...   204   2e-50
ref|XP_006351306.1| PREDICTED: transcription initiation factor I...   193   3e-47
ref|XP_004249253.1| PREDICTED: transcription initiation factor I...   193   3e-47
gb|EPS61179.1| hypothetical protein M569_13619, partial [Genlise...   184   2e-44
ref|XP_006298174.1| hypothetical protein CARUB_v10014225mg [Caps...   158   2e-36
ref|XP_006289549.1| hypothetical protein CARUB_v10003094mg [Caps...   158   2e-36
emb|CAA84309.1| AtTFIIB2 [Arabidopsis thaliana]                       158   2e-36
ref|NP_187644.1| transcription initiation factor IIB-2 [Arabidop...   158   2e-36
ref|XP_002882661.1| transcription initiation factor IIB-2 [Arabi...   158   2e-36
gb|ESW17584.1| hypothetical protein PHAVU_007G251400g [Phaseolus...   155   1e-35
ref|XP_004304334.1| PREDICTED: transcription initiation factor I...   155   1e-35
gb|EMJ03476.1| hypothetical protein PRUPE_ppa008972mg [Prunus pe...   155   1e-35
ref|XP_004150610.1| PREDICTED: transcription initiation factor I...   155   1e-35
ref|XP_006407583.1| hypothetical protein EUTSA_v100213350mg, par...   154   2e-35
ref|XP_006660890.1| PREDICTED: transcription initiation factor I...   154   2e-35
ref|XP_006421305.1| hypothetical protein CICLE_v10005479mg [Citr...   154   2e-35
ref|XP_006421304.1| hypothetical protein CICLE_v10005479mg [Citr...   154   2e-35

>gb|EOY09191.1| Cyclin-like family protein isoform 2, partial [Theobroma cacao]
          Length = 248

 Score =  145 bits (367), Expect(2) = 8e-56
 Identities = 73/109 (66%), Positives = 87/109 (79%)
 Frame = +2

Query: 332 EICSIANGASKKEIGRAKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMNHEEIKV 511
           EICS+ANGA+KKEIGRAKE+IVKQL +E G+S+EMGTIHAGD++RRFCSNLGMN++ +K 
Sbjct: 141 EICSVANGATKKEIGRAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKA 200

Query: 512 VQETVQKAEEFDXXXXXXXXXXXXXYMVTQLSDSKKPILRDISVATTVA 658
            QE VQK+EEFD             Y++TQLSD KKP LRDISVAT VA
Sbjct: 201 AQEAVQKSEEFDIRRSPISIAAAVIYIITQLSDDKKP-LRDISVATGVA 248



 Score = 98.2 bits (243), Expect(2) = 8e-56
 Identities = 50/75 (66%), Positives = 62/75 (82%), Gaps = 3/75 (4%)
 Frame = +3

Query: 3   PVNPLLADAGLSTVISKGPNGSNGD---GSLARLQNRGGDPDRAIVLAFKAIATMADRLS 173
           P NPLLAD GLSTVI+K PNG++G+    SL R QNRG +PDR ++LAFK IATM+DRL 
Sbjct: 62  PTNPLLADGGLSTVIAK-PNGASGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 174 LVSTIRDRASEIYKR 218
           LV+TI+DRA+EIYK+
Sbjct: 121 LVATIKDRANEIYKK 135


>ref|XP_006351254.1| PREDICTED: transcription initiation factor IIB-2-like isoform X2
           [Solanum tuberosum]
          Length = 312

 Score =  204 bits (519), Expect = 2e-50
 Identities = 103/106 (97%), Positives = 103/106 (97%)
 Frame = +3

Query: 3   PVNPLLADAGLSTVISKGPNGSNGDGSLARLQNRGGDPDRAIVLAFKAIATMADRLSLVS 182
           PVNPLL DA LSTVISKGPNGSNGDGSLARLQNRGGDPDRAIVLAFKAIATMADRLSLVS
Sbjct: 61  PVNPLLGDAALSTVISKGPNGSNGDGSLARLQNRGGDPDRAIVLAFKAIATMADRLSLVS 120

Query: 183 TIRDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQESKPRTVK 320
           TIRDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQE KPRTVK
Sbjct: 121 TIRDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQEGKPRTVK 166



 Score =  191 bits (485), Expect = 2e-46
 Identities = 106/154 (68%), Positives = 111/154 (72%), Gaps = 10/154 (6%)
 Frame = +2

Query: 230 EVYKRQES*CFGR----------CLYLHCLSSRKQTTHCKXXXXEICSIANGASKKEIGR 379
           E+YKR E     R          C+Y+ C    K  T       EICSIANGASKKEIGR
Sbjct: 128 EIYKRLEDQKCTRGRNLDALVAACIYIACRQEGKPRT-----VKEICSIANGASKKEIGR 182

Query: 380 AKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMNHEEIKVVQETVQKAEEFDXXXX 559
           AKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMNHEEIKVVQETVQKAEEFD    
Sbjct: 183 AKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMNHEEIKVVQETVQKAEEFDIRRS 242

Query: 560 XXXXXXXXXYMVTQLSDSKKPILRDISVATTVAE 661
                    YM+TQLSDSKKP+LRDISVATTVAE
Sbjct: 243 PISIAAAIIYMITQLSDSKKPVLRDISVATTVAE 276


>ref|XP_006351253.1| PREDICTED: transcription initiation factor IIB-2-like isoform X1
           [Solanum tuberosum]
          Length = 313

 Score =  204 bits (519), Expect = 2e-50
 Identities = 103/106 (97%), Positives = 103/106 (97%)
 Frame = +3

Query: 3   PVNPLLADAGLSTVISKGPNGSNGDGSLARLQNRGGDPDRAIVLAFKAIATMADRLSLVS 182
           PVNPLL DA LSTVISKGPNGSNGDGSLARLQNRGGDPDRAIVLAFKAIATMADRLSLVS
Sbjct: 61  PVNPLLGDAALSTVISKGPNGSNGDGSLARLQNRGGDPDRAIVLAFKAIATMADRLSLVS 120

Query: 183 TIRDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQESKPRTVK 320
           TIRDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQE KPRTVK
Sbjct: 121 TIRDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQEGKPRTVK 166



 Score =  186 bits (473), Expect = 4e-45
 Identities = 106/155 (68%), Positives = 111/155 (71%), Gaps = 11/155 (7%)
 Frame = +2

Query: 230 EVYKRQES*CFGR----------CLYLHCLSSRKQTTHCKXXXXEICSIANGASKKEIGR 379
           E+YKR E     R          C+Y+ C    K  T       EICSIANGASKKEIGR
Sbjct: 128 EIYKRLEDQKCTRGRNLDALVAACIYIACRQEGKPRT-----VKEICSIANGASKKEIGR 182

Query: 380 AKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMNHEEIKVVQETVQKAEEFDXXXX 559
           AKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMNHEEIKVVQETVQKAEEFD    
Sbjct: 183 AKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMNHEEIKVVQETVQKAEEFDIRRS 242

Query: 560 XXXXXXXXXYMVTQLSDSKKPILR-DISVATTVAE 661
                    YM+TQLSDSKKP+LR DISVATTVAE
Sbjct: 243 PISIAAAIIYMITQLSDSKKPVLRADISVATTVAE 277


>ref|XP_004249217.1| PREDICTED: transcription initiation factor IIB-2-like [Solanum
           lycopersicum]
          Length = 313

 Score =  204 bits (519), Expect = 2e-50
 Identities = 103/106 (97%), Positives = 103/106 (97%)
 Frame = +3

Query: 3   PVNPLLADAGLSTVISKGPNGSNGDGSLARLQNRGGDPDRAIVLAFKAIATMADRLSLVS 182
           PVNPLL DA LSTVISKGPNGSNGDGSLARLQNRGGDPDRAIVLAFKAIATMADRLSLVS
Sbjct: 61  PVNPLLGDAALSTVISKGPNGSNGDGSLARLQNRGGDPDRAIVLAFKAIATMADRLSLVS 120

Query: 183 TIRDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQESKPRTVK 320
           TIRDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQE KPRTVK
Sbjct: 121 TIRDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQEGKPRTVK 166



 Score =  186 bits (473), Expect = 4e-45
 Identities = 106/155 (68%), Positives = 111/155 (71%), Gaps = 11/155 (7%)
 Frame = +2

Query: 230 EVYKRQES*CFGR----------CLYLHCLSSRKQTTHCKXXXXEICSIANGASKKEIGR 379
           E+YKR E     R          C+Y+ C    K  T       EICSIANGASKKEIGR
Sbjct: 128 EIYKRLEDQKCTRGRNLDALVAACIYIACRQEGKPRT-----VKEICSIANGASKKEIGR 182

Query: 380 AKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMNHEEIKVVQETVQKAEEFDXXXX 559
           AKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMNHEEIKVVQETVQKAEEFD    
Sbjct: 183 AKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMNHEEIKVVQETVQKAEEFDIRRS 242

Query: 560 XXXXXXXXXYMVTQLSDSKKPILR-DISVATTVAE 661
                    YM+TQLSDSKKP+LR DISVATTVAE
Sbjct: 243 PISIAAAIIYMITQLSDSKKPVLRADISVATTVAE 277


>ref|XP_006351306.1| PREDICTED: transcription initiation factor IIB-2-like [Solanum
           tuberosum]
          Length = 312

 Score =  193 bits (491), Expect = 3e-47
 Identities = 96/106 (90%), Positives = 100/106 (94%)
 Frame = +3

Query: 3   PVNPLLADAGLSTVISKGPNGSNGDGSLARLQNRGGDPDRAIVLAFKAIATMADRLSLVS 182
           PVNPLL D GLSTVISKGPNGSNGD SLARLQNRGGDP+RA+V+AFKAIA MADRLSLVS
Sbjct: 62  PVNPLLGDVGLSTVISKGPNGSNGDSSLARLQNRGGDPERALVMAFKAIANMADRLSLVS 121

Query: 183 TIRDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQESKPRTVK 320
           TI+DRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQE K RTVK
Sbjct: 122 TIKDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQEGKARTVK 167



 Score =  176 bits (445), Expect = 7e-42
 Identities = 98/154 (63%), Positives = 109/154 (70%), Gaps = 10/154 (6%)
 Frame = +2

Query: 230 EVYKRQES*CFGR----------CLYLHCLSSRKQTTHCKXXXXEICSIANGASKKEIGR 379
           E+YKR E     R          C+Y+ C    K  T       EICSIANGA+KKEIGR
Sbjct: 129 EIYKRLEDQKCTRGRNLDALVAACIYIACRQEGKART-----VKEICSIANGATKKEIGR 183

Query: 380 AKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMNHEEIKVVQETVQKAEEFDXXXX 559
           AKEFIVKQLKVEMG+SMEMGTIHAGDYLRRFCSN+GMNHEEIK VQETV+K+EEFD    
Sbjct: 184 AKEFIVKQLKVEMGDSMEMGTIHAGDYLRRFCSNIGMNHEEIKAVQETVKKSEEFDIRRS 243

Query: 560 XXXXXXXXXYMVTQLSDSKKPILRDISVATTVAE 661
                    YM+TQL+DSKKP LRDIS+ATTVAE
Sbjct: 244 PISIAAAIIYMLTQLTDSKKP-LRDISIATTVAE 276


>ref|XP_004249253.1| PREDICTED: transcription initiation factor IIB-2-like [Solanum
           lycopersicum]
          Length = 312

 Score =  193 bits (491), Expect = 3e-47
 Identities = 96/106 (90%), Positives = 100/106 (94%)
 Frame = +3

Query: 3   PVNPLLADAGLSTVISKGPNGSNGDGSLARLQNRGGDPDRAIVLAFKAIATMADRLSLVS 182
           PVNPLL D GLSTVISKGPNGSNGD SLARLQNRGGDP+RA+V+AFKAIA MADRLSLVS
Sbjct: 62  PVNPLLGDVGLSTVISKGPNGSNGDSSLARLQNRGGDPERALVMAFKAIANMADRLSLVS 121

Query: 183 TIRDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQESKPRTVK 320
           TI+DRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQE K RTVK
Sbjct: 122 TIKDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQEGKARTVK 167



 Score =  176 bits (445), Expect = 7e-42
 Identities = 98/154 (63%), Positives = 109/154 (70%), Gaps = 10/154 (6%)
 Frame = +2

Query: 230 EVYKRQES*CFGR----------CLYLHCLSSRKQTTHCKXXXXEICSIANGASKKEIGR 379
           E+YKR E     R          C+Y+ C    K  T       EICSIANGA+KKEIGR
Sbjct: 129 EIYKRLEDQKCTRGRNLDALVAACIYIACRQEGKART-----VKEICSIANGATKKEIGR 183

Query: 380 AKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMNHEEIKVVQETVQKAEEFDXXXX 559
           AKEFIVKQLKVEMG+SMEMGTIHAGDYLRRFCSN+GMNHEEIK VQETV+K+EEFD    
Sbjct: 184 AKEFIVKQLKVEMGDSMEMGTIHAGDYLRRFCSNIGMNHEEIKAVQETVKKSEEFDIRRS 243

Query: 560 XXXXXXXXXYMVTQLSDSKKPILRDISVATTVAE 661
                    YM+TQL+DSKKP LRDIS+ATTVAE
Sbjct: 244 PISIAAAIIYMLTQLTDSKKP-LRDISIATTVAE 276


>gb|EPS61179.1| hypothetical protein M569_13619, partial [Genlisea aurea]
          Length = 211

 Score =  184 bits (468), Expect = 2e-44
 Identities = 92/106 (86%), Positives = 97/106 (91%)
 Frame = +3

Query: 3   PVNPLLADAGLSTVISKGPNGSNGDGSLARLQNRGGDPDRAIVLAFKAIATMADRLSLVS 182
           PVNPLLADA LSTVIS+G  GSNGD SLARLQNRG DPDRAIVLAFK I+ MADRLSLV+
Sbjct: 62  PVNPLLADAALSTVISRGAGGSNGDASLARLQNRGSDPDRAIVLAFKTISNMADRLSLVT 121

Query: 183 TIRDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQESKPRTVK 320
           TI+DRASEIYKRLEDQKCTRGRNL+ALVA CIYIACRQE KPRTVK
Sbjct: 122 TIKDRASEIYKRLEDQKCTRGRNLEALVAGCIYIACRQEGKPRTVK 167



 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 51/88 (57%), Positives = 56/88 (63%), Gaps = 10/88 (11%)
 Frame = +2

Query: 230 EVYKRQES*CFGR----------CLYLHCLSSRKQTTHCKXXXXEICSIANGASKKEIGR 379
           E+YKR E     R          C+Y+ C    K  T       EICS+  GA+KKEIGR
Sbjct: 129 EIYKRLEDQKCTRGRNLEALVAGCIYIACRQEGKPRT-----VKEICSVVAGATKKEIGR 183

Query: 380 AKEFIVKQLKVEMGESMEMGTIHAGDYL 463
           AKEFIVKQLKVEMGESMEMGTIHAGDYL
Sbjct: 184 AKEFIVKQLKVEMGESMEMGTIHAGDYL 211


>ref|XP_006298174.1| hypothetical protein CARUB_v10014225mg [Capsella rubella]
           gi|482566883|gb|EOA31072.1| hypothetical protein
           CARUB_v10014225mg [Capsella rubella]
          Length = 277

 Score =  158 bits (399), Expect = 2e-36
 Identities = 80/109 (73%), Positives = 93/109 (85%), Gaps = 3/109 (2%)
 Frame = +3

Query: 3   PVNPLLADAGLSTVISKGPNGSNGD---GSLARLQNRGGDPDRAIVLAFKAIATMADRLS 173
           P NPLLAD GL+TVISK PNGS+GD    SL R QNRG +PDR +++AFK IATMADRL 
Sbjct: 62  PTNPLLADGGLTTVISK-PNGSSGDFLSSSLGRWQNRGSNPDRGLIVAFKTIATMADRLG 120

Query: 174 LVSTIRDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQESKPRTVK 320
           LV+TI+DRA+EIYKR+EDQK +RGRN DAL+AAC+YIACRQE KPRTVK
Sbjct: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVK 169



 Score =  140 bits (352), Expect = 4e-31
 Identities = 74/142 (52%), Positives = 92/142 (64%), Gaps = 10/142 (7%)
 Frame = +2

Query: 230 EVYKRQES*CFGR----------CLYLHCLSSRKQTTHCKXXXXEICSIANGASKKEIGR 379
           E+YKR E     R          CLY+ C    K  T       EICS+ANGA+KKEIGR
Sbjct: 131 EIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRT-----VKEICSVANGATKKEIGR 185

Query: 380 AKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMNHEEIKVVQETVQKAEEFDXXXX 559
           AKE+IVKQL +E G+S+EMGTIHAGD++RRFCSNLGM ++ +K  QE+VQK+EEFD    
Sbjct: 186 AKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMTNQTVKAAQESVQKSEEFDIRRS 245

Query: 560 XXXXXXXXXYMVTQLSDSKKPI 625
                    Y++TQLSD KKP+
Sbjct: 246 PISIAAAVIYIITQLSDEKKPL 267


>ref|XP_006289549.1| hypothetical protein CARUB_v10003094mg [Capsella rubella]
           gi|482558255|gb|EOA22447.1| hypothetical protein
           CARUB_v10003094mg [Capsella rubella]
          Length = 312

 Score =  158 bits (399), Expect = 2e-36
 Identities = 80/109 (73%), Positives = 93/109 (85%), Gaps = 3/109 (2%)
 Frame = +3

Query: 3   PVNPLLADAGLSTVISKGPNGSNGD---GSLARLQNRGGDPDRAIVLAFKAIATMADRLS 173
           P NPLLAD GL+TVISK PNGS+GD    SL R QNRG +PDR +++AFK IATMADRL 
Sbjct: 62  PTNPLLADGGLTTVISK-PNGSSGDFLSSSLGRWQNRGSNPDRGLIVAFKTIATMADRLG 120

Query: 174 LVSTIRDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQESKPRTVK 320
           LV+TI+DRA+EIYKR+EDQK +RGRN DAL+AAC+YIACRQE KPRTVK
Sbjct: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVK 169



 Score =  150 bits (379), Expect = 3e-34
 Identities = 83/154 (53%), Positives = 102/154 (66%), Gaps = 10/154 (6%)
 Frame = +2

Query: 230 EVYKRQES*CFGR----------CLYLHCLSSRKQTTHCKXXXXEICSIANGASKKEIGR 379
           E+YKR E     R          CLY+ C    K  T       EICS+ANGA+KKEIGR
Sbjct: 131 EIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRT-----VKEICSVANGATKKEIGR 185

Query: 380 AKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMNHEEIKVVQETVQKAEEFDXXXX 559
           AKE+I+KQL +E G+S+EMGTIHAGD++RRFCSNLGM ++ +K  QE+VQK+EEFD    
Sbjct: 186 AKEYIIKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMGNQTVKAAQESVQKSEEFDIRRS 245

Query: 560 XXXXXXXXXYMVTQLSDSKKPILRDISVATTVAE 661
                    Y++TQLSD KK +LRDISVAT VAE
Sbjct: 246 PISIAAAVIYIITQLSDDKK-LLRDISVATGVAE 278


>emb|CAA84309.1| AtTFIIB2 [Arabidopsis thaliana]
          Length = 301

 Score =  158 bits (399), Expect = 2e-36
 Identities = 80/109 (73%), Positives = 93/109 (85%), Gaps = 3/109 (2%)
 Frame = +3

Query: 3   PVNPLLADAGLSTVISKGPNGSNGD---GSLARLQNRGGDPDRAIVLAFKAIATMADRLS 173
           P NPLLAD GL+TVISK PNGS+GD    SL R QNRG +PDR +++AFK IATMADRL 
Sbjct: 51  PTNPLLADGGLTTVISK-PNGSSGDFLSSSLGRWQNRGSNPDRGLIVAFKTIATMADRLG 109

Query: 174 LVSTIRDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQESKPRTVK 320
           LV+TI+DRA+EIYKR+EDQK +RGRN DAL+AAC+YIACRQE KPRTVK
Sbjct: 110 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVK 158



 Score =  150 bits (379), Expect = 3e-34
 Identities = 84/154 (54%), Positives = 101/154 (65%), Gaps = 10/154 (6%)
 Frame = +2

Query: 230 EVYKRQES*CFGR----------CLYLHCLSSRKQTTHCKXXXXEICSIANGASKKEIGR 379
           E+YKR E     R          CLY+ C    K  T       EICS+ANGA+KKEIGR
Sbjct: 120 EIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRT-----VKEICSVANGATKKEIGR 174

Query: 380 AKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMNHEEIKVVQETVQKAEEFDXXXX 559
           AKE+IVKQL +E G+ +EMGTIHAGD++RRFCSNLGM ++ +K  QE+VQK+EEFD    
Sbjct: 175 AKEYIVKQLGLETGQLVEMGTIHAGDFMRRFCSNLGMTNQTVKAAQESVQKSEEFDIRRS 234

Query: 560 XXXXXXXXXYMVTQLSDSKKPILRDISVATTVAE 661
                    Y++TQLSD KKP LRDISVAT VAE
Sbjct: 235 PISIAAAVIYIITQLSDEKKP-LRDISVATGVAE 267


>ref|NP_187644.1| transcription initiation factor IIB-2 [Arabidopsis thaliana]
           gi|21363045|sp|Q9SS44.1|TF2B2_ARATH RecName:
           Full=Transcription initiation factor IIB-2; AltName:
           Full=General transcription factor TFIIB-2;
           Short=AtTFIIB2 gi|6056193|gb|AAF02810.1|AC009400_6
           transcription initiation factor IIB (TFIIB) [Arabidopsis
           thaliana] gi|15215784|gb|AAK91437.1| AT3g10330/F14P13_7
           [Arabidopsis thaliana] gi|16974427|gb|AAL31139.1|
           AT3g10330/F14P13_7 [Arabidopsis thaliana]
           gi|21593436|gb|AAM65403.1| transcription initiation
           factor IIB (TFIIB) [Arabidopsis thaliana]
           gi|39545880|gb|AAR28003.1| TFIIB2 [Arabidopsis thaliana]
           gi|332641371|gb|AEE74892.1| transcription initiation
           factor IIB-2 [Arabidopsis thaliana]
          Length = 312

 Score =  158 bits (399), Expect = 2e-36
 Identities = 80/109 (73%), Positives = 93/109 (85%), Gaps = 3/109 (2%)
 Frame = +3

Query: 3   PVNPLLADAGLSTVISKGPNGSNGD---GSLARLQNRGGDPDRAIVLAFKAIATMADRLS 173
           P NPLLAD GL+TVISK PNGS+GD    SL R QNRG +PDR +++AFK IATMADRL 
Sbjct: 62  PTNPLLADGGLTTVISK-PNGSSGDFLSSSLGRWQNRGSNPDRGLIVAFKTIATMADRLG 120

Query: 174 LVSTIRDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQESKPRTVK 320
           LV+TI+DRA+EIYKR+EDQK +RGRN DAL+AAC+YIACRQE KPRTVK
Sbjct: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVK 169



 Score =  150 bits (379), Expect = 3e-34
 Identities = 84/154 (54%), Positives = 101/154 (65%), Gaps = 10/154 (6%)
 Frame = +2

Query: 230 EVYKRQES*CFGR----------CLYLHCLSSRKQTTHCKXXXXEICSIANGASKKEIGR 379
           E+YKR E     R          CLY+ C    K  T       EICS+ANGA+KKEIGR
Sbjct: 131 EIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRT-----VKEICSVANGATKKEIGR 185

Query: 380 AKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMNHEEIKVVQETVQKAEEFDXXXX 559
           AKE+IVKQL +E G+ +EMGTIHAGD++RRFCSNLGM ++ +K  QE+VQK+EEFD    
Sbjct: 186 AKEYIVKQLGLETGQLVEMGTIHAGDFMRRFCSNLGMTNQTVKAAQESVQKSEEFDIRRS 245

Query: 560 XXXXXXXXXYMVTQLSDSKKPILRDISVATTVAE 661
                    Y++TQLSD KKP LRDISVAT VAE
Sbjct: 246 PISIAAAVIYIITQLSDEKKP-LRDISVATGVAE 278


>ref|XP_002882661.1| transcription initiation factor IIB-2 [Arabidopsis lyrata subsp.
           lyrata] gi|565481070|ref|XP_006298175.1| hypothetical
           protein CARUB_v10014225mg [Capsella rubella]
           gi|297328501|gb|EFH58920.1| transcription initiation
           factor IIB-2 [Arabidopsis lyrata subsp. lyrata]
           gi|482566884|gb|EOA31073.1| hypothetical protein
           CARUB_v10014225mg [Capsella rubella]
          Length = 312

 Score =  158 bits (399), Expect = 2e-36
 Identities = 80/109 (73%), Positives = 93/109 (85%), Gaps = 3/109 (2%)
 Frame = +3

Query: 3   PVNPLLADAGLSTVISKGPNGSNGD---GSLARLQNRGGDPDRAIVLAFKAIATMADRLS 173
           P NPLLAD GL+TVISK PNGS+GD    SL R QNRG +PDR +++AFK IATMADRL 
Sbjct: 62  PTNPLLADGGLTTVISK-PNGSSGDFLSSSLGRWQNRGSNPDRGLIVAFKTIATMADRLG 120

Query: 174 LVSTIRDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQESKPRTVK 320
           LV+TI+DRA+EIYKR+EDQK +RGRN DAL+AAC+YIACRQE KPRTVK
Sbjct: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVK 169



 Score =  152 bits (385), Expect = 7e-35
 Identities = 85/154 (55%), Positives = 102/154 (66%), Gaps = 10/154 (6%)
 Frame = +2

Query: 230 EVYKRQES*CFGR----------CLYLHCLSSRKQTTHCKXXXXEICSIANGASKKEIGR 379
           E+YKR E     R          CLY+ C    K  T       EICS+ANGA+KKEIGR
Sbjct: 131 EIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRT-----VKEICSVANGATKKEIGR 185

Query: 380 AKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMNHEEIKVVQETVQKAEEFDXXXX 559
           AKE+IVKQL +E G+S+EMGTIHAGD++RRFCSNLGM ++ +K  QE+VQK+EEFD    
Sbjct: 186 AKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMTNQTVKAAQESVQKSEEFDIRRS 245

Query: 560 XXXXXXXXXYMVTQLSDSKKPILRDISVATTVAE 661
                    Y++TQLSD KKP LRDISVAT VAE
Sbjct: 246 PISIAAAVIYIITQLSDEKKP-LRDISVATGVAE 278


>gb|ESW17584.1| hypothetical protein PHAVU_007G251400g [Phaseolus vulgaris]
          Length = 312

 Score =  155 bits (392), Expect = 1e-35
 Identities = 79/109 (72%), Positives = 92/109 (84%), Gaps = 3/109 (2%)
 Frame = +3

Query: 3   PVNPLLADAGLSTVISKGPNGSNGD---GSLARLQNRGGDPDRAIVLAFKAIATMADRLS 173
           P NPLL D GLSTVI+K PNGS G+    SL R QNRG +PDRA++LAFK IATM+DRL 
Sbjct: 62  PSNPLLTDGGLSTVIAK-PNGSGGEFLSSSLGRWQNRGSNPDRALILAFKTIATMSDRLG 120

Query: 174 LVSTIRDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQESKPRTVK 320
           LV+TI+DRA+EIYKR+EDQK +RGRN DAL+AAC+YIACRQE KPRTVK
Sbjct: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVK 169



 Score =  152 bits (384), Expect = 9e-35
 Identities = 83/154 (53%), Positives = 102/154 (66%), Gaps = 10/154 (6%)
 Frame = +2

Query: 230 EVYKRQES*CFGR----------CLYLHCLSSRKQTTHCKXXXXEICSIANGASKKEIGR 379
           E+YKR E     R          CLY+ C    K  T       EICS+ANGA+KKE+GR
Sbjct: 131 EIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRT-----VKEICSVANGATKKEVGR 185

Query: 380 AKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMNHEEIKVVQETVQKAEEFDXXXX 559
           AKE+IVKQL +E G+S+EMGTIHAGD++RRFCSNLGMN++ +K  QE VQK+EEFD    
Sbjct: 186 AKEYIVKQLGLENGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQKSEEFDIRRS 245

Query: 560 XXXXXXXXXYMVTQLSDSKKPILRDISVATTVAE 661
                    Y++TQLSD KKP L+DIS+AT VAE
Sbjct: 246 PISIAAAVIYIITQLSDDKKP-LKDISIATGVAE 278


>ref|XP_004304334.1| PREDICTED: transcription initiation factor IIB-like [Fragaria vesca
           subsp. vesca]
          Length = 312

 Score =  155 bits (392), Expect = 1e-35
 Identities = 78/109 (71%), Positives = 93/109 (85%), Gaps = 3/109 (2%)
 Frame = +3

Query: 3   PVNPLLADAGLSTVISKGPNGSNGD---GSLARLQNRGGDPDRAIVLAFKAIATMADRLS 173
           P NPLLAD GLSTVI+K PNG++G+    SL R QNRG +PDR ++LAFK IATM+DRL 
Sbjct: 62  PTNPLLADGGLSTVIAK-PNGASGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 174 LVSTIRDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQESKPRTVK 320
           LV+TI+DRA+EIYKR+EDQK +RGRN DAL+AAC+YIACRQE KPRTVK
Sbjct: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVK 169



 Score =  152 bits (384), Expect = 9e-35
 Identities = 84/154 (54%), Positives = 102/154 (66%), Gaps = 10/154 (6%)
 Frame = +2

Query: 230 EVYKRQES*CFGR----------CLYLHCLSSRKQTTHCKXXXXEICSIANGASKKEIGR 379
           E+YKR E     R          CLY+ C    K  T       EICS+ANGA+KKEIGR
Sbjct: 131 EIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRT-----VKEICSVANGATKKEIGR 185

Query: 380 AKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMNHEEIKVVQETVQKAEEFDXXXX 559
           AKE+IVKQL +E G+S+EMGTIHAGD++RRFCSNLGMN++ +K  QE VQK+EEFD    
Sbjct: 186 AKEYIVKQLGLEKGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQKSEEFDIRRS 245

Query: 560 XXXXXXXXXYMVTQLSDSKKPILRDISVATTVAE 661
                    Y++TQLSD KKP L+DIS+AT VAE
Sbjct: 246 PISIAAAVIYIITQLSDDKKP-LKDISLATGVAE 278


>gb|EMJ03476.1| hypothetical protein PRUPE_ppa008972mg [Prunus persica]
          Length = 312

 Score =  155 bits (392), Expect = 1e-35
 Identities = 78/109 (71%), Positives = 93/109 (85%), Gaps = 3/109 (2%)
 Frame = +3

Query: 3   PVNPLLADAGLSTVISKGPNGSNGD---GSLARLQNRGGDPDRAIVLAFKAIATMADRLS 173
           P NPLLAD GLSTVI+K PNG++G+    SL R QNRG +PDR ++LAFK IATM+DRL 
Sbjct: 62  PTNPLLADGGLSTVIAK-PNGASGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 174 LVSTIRDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQESKPRTVK 320
           LV+TI+DRA+EIYKR+EDQK +RGRN DAL+AAC+YIACRQE KPRTVK
Sbjct: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVK 169



 Score =  154 bits (390), Expect = 2e-35
 Identities = 86/154 (55%), Positives = 102/154 (66%), Gaps = 10/154 (6%)
 Frame = +2

Query: 230 EVYKRQES*CFGR----------CLYLHCLSSRKQTTHCKXXXXEICSIANGASKKEIGR 379
           E+YKR E     R          CLY+ C    K  T       EICS+ANGASKKEIGR
Sbjct: 131 EIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRT-----VKEICSVANGASKKEIGR 185

Query: 380 AKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMNHEEIKVVQETVQKAEEFDXXXX 559
           AKE+IVKQL +E G+S+EMGTIHAGD++RRFCSNLGMN++ +K  QE VQK+EEFD    
Sbjct: 186 AKEYIVKQLGLEKGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQKSEEFDIRRS 245

Query: 560 XXXXXXXXXYMVTQLSDSKKPILRDISVATTVAE 661
                    Y++TQLSD KKP L+DISVAT VAE
Sbjct: 246 PISIAAAVIYIITQLSDDKKP-LKDISVATGVAE 278


>ref|XP_004150610.1| PREDICTED: transcription initiation factor IIB-2-like [Cucumis
           sativus] gi|449529834|ref|XP_004171903.1| PREDICTED:
           transcription initiation factor IIB-2-like [Cucumis
           sativus]
          Length = 312

 Score =  155 bits (391), Expect = 1e-35
 Identities = 78/109 (71%), Positives = 92/109 (84%), Gaps = 3/109 (2%)
 Frame = +3

Query: 3   PVNPLLADAGLSTVISKGPNGSNGD---GSLARLQNRGGDPDRAIVLAFKAIATMADRLS 173
           P NPLLAD GLSTVI+K PNG+ G+    SL R QNRG +PDR ++LAFK IATM+DRL 
Sbjct: 62  PTNPLLADGGLSTVIAK-PNGTTGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 174 LVSTIRDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQESKPRTVK 320
           LV+TI+DRA+EIYKR+EDQK +RGRN DAL+AAC+YIACRQE KPRTVK
Sbjct: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVK 169



 Score =  153 bits (387), Expect = 4e-35
 Identities = 85/154 (55%), Positives = 102/154 (66%), Gaps = 10/154 (6%)
 Frame = +2

Query: 230 EVYKRQES*CFGR----------CLYLHCLSSRKQTTHCKXXXXEICSIANGASKKEIGR 379
           E+YKR E     R          CLY+ C    K  T       EICS+ANGA+KKEIGR
Sbjct: 131 EIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRT-----VKEICSVANGATKKEIGR 185

Query: 380 AKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMNHEEIKVVQETVQKAEEFDXXXX 559
           AKE+IVKQL +E G+S+EMGTIHAGD++RRFCSNLGMN++ +K  QE VQK+EEFD    
Sbjct: 186 AKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQKSEEFDIRRS 245

Query: 560 XXXXXXXXXYMVTQLSDSKKPILRDISVATTVAE 661
                    Y++TQLSD KKP L+DISVAT VAE
Sbjct: 246 PISIAAAVIYIITQLSDDKKP-LKDISVATGVAE 278


>ref|XP_006407583.1| hypothetical protein EUTSA_v100213350mg, partial [Eutrema
           salsugineum] gi|557108729|gb|ESQ49036.1| hypothetical
           protein EUTSA_v100213350mg, partial [Eutrema
           salsugineum]
          Length = 167

 Score =  154 bits (390), Expect = 2e-35
 Identities = 78/107 (72%), Positives = 91/107 (85%), Gaps = 3/107 (2%)
 Frame = +3

Query: 3   PVNPLLADAGLSTVISKGPNGSNGD---GSLARLQNRGGDPDRAIVLAFKAIATMADRLS 173
           P NPLLAD GL+TVISK PNGS+GD    SL R QNRG +PDR +++AFK IATMADRL 
Sbjct: 62  PTNPLLADGGLTTVISK-PNGSSGDFLSSSLGRWQNRGSNPDRGLIVAFKTIATMADRLG 120

Query: 174 LVSTIRDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQESKPRT 314
           LV+TI+DRA+EIYKR+EDQK +RGRN DAL+AAC+YIACRQE KPRT
Sbjct: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRT 167


>ref|XP_006660890.1| PREDICTED: transcription initiation factor IIB-like [Oryza
           brachyantha]
          Length = 312

 Score =  154 bits (389), Expect = 2e-35
 Identities = 81/140 (57%), Positives = 97/140 (69%)
 Frame = +2

Query: 242 RQES*CFGRCLYLHCLSSRKQTTHCKXXXXEICSIANGASKKEIGRAKEFIVKQLKVEMG 421
           R +      CLY+ C    +  T       EICS+ANGA+KKEIGRAKEFIVKQL+VEMG
Sbjct: 145 RNQDAILAACLYIACRQEDRPRT-----VKEICSVANGATKKEIGRAKEFIVKQLEVEMG 199

Query: 422 ESMEMGTIHAGDYLRRFCSNLGMNHEEIKVVQETVQKAEEFDXXXXXXXXXXXXXYMVTQ 601
           +SMEMGTIHAGD+LRRFCS LGMN++ +K  QE VQ++EE D             YM+TQ
Sbjct: 200 QSMEMGTIHAGDFLRRFCSTLGMNNQAVKAAQEAVQRSEELDIRRSPISIAAAVIYMITQ 259

Query: 602 LSDSKKPILRDISVATTVAE 661
           LSD KKP L+DIS+AT VAE
Sbjct: 260 LSDDKKP-LKDISLATGVAE 278



 Score =  145 bits (366), Expect = 1e-32
 Identities = 72/109 (66%), Positives = 89/109 (81%), Gaps = 3/109 (2%)
 Frame = +3

Query: 3   PVNPLLADAGLSTVISKGPNGSNGD---GSLARLQNRGGDPDRAIVLAFKAIATMADRLS 173
           P NPLL D GLSTVI+K PNG+ G+    SL R QNRG +PDR+++LAF+ IA MADRL 
Sbjct: 62  PTNPLLTDGGLSTVIAK-PNGAQGEFLSSSLGRWQNRGSNPDRSLILAFRTIANMADRLG 120

Query: 174 LVSTIRDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQESKPRTVK 320
           LV+TI+DRA+EIYK++ED K  RGRN DA++AAC+YIACRQE +PRTVK
Sbjct: 121 LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVK 169


>ref|XP_006421305.1| hypothetical protein CICLE_v10005479mg [Citrus clementina]
           gi|557523178|gb|ESR34545.1| hypothetical protein
           CICLE_v10005479mg [Citrus clementina]
          Length = 245

 Score =  154 bits (389), Expect = 2e-35
 Identities = 77/109 (70%), Positives = 93/109 (85%), Gaps = 3/109 (2%)
 Frame = +3

Query: 3   PVNPLLADAGLSTVISKGPNGSNGD---GSLARLQNRGGDPDRAIVLAFKAIATMADRLS 173
           P NPLLAD GLSTVI+K PNG++G+    SL R QNRG +PDR ++LAFK IATM+DRL 
Sbjct: 62  PTNPLLADGGLSTVIAK-PNGASGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 174 LVSTIRDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQESKPRTVK 320
           LV+TI+DRA+EIYK++EDQK +RGRN DAL+AAC+YIACRQE KPRTVK
Sbjct: 121 LVATIKDRANEIYKKVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVK 169



 Score =  125 bits (314), Expect = 1e-26
 Identities = 61/102 (59%), Positives = 75/102 (73%)
 Frame = +2

Query: 242 RQES*CFGRCLYLHCLSSRKQTTHCKXXXXEICSIANGASKKEIGRAKEFIVKQLKVEMG 421
           R +      CLY+ C    K  T       EICS+ANGA+KKEIGRAKE+IVKQL +E G
Sbjct: 145 RNQDALLAACLYIACRQEDKPRT-----VKEICSVANGATKKEIGRAKEYIVKQLGLETG 199

Query: 422 ESMEMGTIHAGDYLRRFCSNLGMNHEEIKVVQETVQKAEEFD 547
           +S+EMGTIHAGD++RRFCSNLGMN++ +K  QE VQK+EEFD
Sbjct: 200 QSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQKSEEFD 241


>ref|XP_006421304.1| hypothetical protein CICLE_v10005479mg [Citrus clementina]
           gi|568880032|ref|XP_006492943.1| PREDICTED:
           transcription initiation factor IIB-2-like [Citrus
           sinensis] gi|557523177|gb|ESR34544.1| hypothetical
           protein CICLE_v10005479mg [Citrus clementina]
          Length = 312

 Score =  154 bits (389), Expect = 2e-35
 Identities = 77/109 (70%), Positives = 93/109 (85%), Gaps = 3/109 (2%)
 Frame = +3

Query: 3   PVNPLLADAGLSTVISKGPNGSNGD---GSLARLQNRGGDPDRAIVLAFKAIATMADRLS 173
           P NPLLAD GLSTVI+K PNG++G+    SL R QNRG +PDR ++LAFK IATM+DRL 
Sbjct: 62  PTNPLLADGGLSTVIAK-PNGASGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 174 LVSTIRDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQESKPRTVK 320
           LV+TI+DRA+EIYK++EDQK +RGRN DAL+AAC+YIACRQE KPRTVK
Sbjct: 121 LVATIKDRANEIYKKVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVK 169



 Score =  152 bits (385), Expect = 7e-35
 Identities = 80/140 (57%), Positives = 97/140 (69%)
 Frame = +2

Query: 242 RQES*CFGRCLYLHCLSSRKQTTHCKXXXXEICSIANGASKKEIGRAKEFIVKQLKVEMG 421
           R +      CLY+ C    K  T       EICS+ANGA+KKEIGRAKE+IVKQL +E G
Sbjct: 145 RNQDALLAACLYIACRQEDKPRT-----VKEICSVANGATKKEIGRAKEYIVKQLGLETG 199

Query: 422 ESMEMGTIHAGDYLRRFCSNLGMNHEEIKVVQETVQKAEEFDXXXXXXXXXXXXXYMVTQ 601
           +S+EMGTIHAGD++RRFCSNLGMN++ +K  QE VQK+EEFD             Y++TQ
Sbjct: 200 QSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQKSEEFDIRRSPISIAAAVIYIITQ 259

Query: 602 LSDSKKPILRDISVATTVAE 661
           LSD KKP L+DISVAT VAE
Sbjct: 260 LSDDKKP-LKDISVATGVAE 278


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