BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00000236
         (749 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera]   336   6e-90
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]   309   6e-82
gb|EEE67150.1| hypothetical protein OsJ_24213 [Oryza sativa Japo...   303   5e-80
dbj|BAC65862.1| hypothetical polyprotein [Oryza sativa Japonica ...   302   7e-80
gb|ABA96132.1| retrotransposon protein, putative, Ty1-copia subc...   302   7e-80
gb|ABA98785.1| retrotransposon protein, putative, Ty1-copia subc...   302   7e-80
gb|ABF94664.1| retrotransposon protein, putative, Ty1-copia subc...   302   7e-80
gb|AAM94928.1| putative polyprotein [Oryza sativa Japonica Group]     302   9e-80
emb|CAH66912.1| OSIGBa0126B18.5 [Oryza sativa Indica Group]           302   9e-80
gb|ABB47865.2| retrotransposon protein, putative, Ty1-copia subc...   302   9e-80
gb|AAV43959.2| putative polyprotein [Oryza sativa Japonica Group]     302   9e-80
gb|AAP50927.1| putative polyprotein [Oryza sativa Japonica Group...   302   9e-80
gb|AAM95676.1| putative polyprotein [Oryza sativa Japonica Group]     302   9e-80
gb|AAK39592.1|AC025296_27 putative retrotransposon polyprotein [...   301   1e-79
gb|ABG66192.1| retrotransposon protein, putative, Ty1-copia subc...   301   1e-79
gb|ABF99156.1| retrotransposon protein, putative, Ty1-copia subc...   301   1e-79
gb|AAM19019.1|AC084748_9 putative polyprotein [Oryza sativa Japo...   301   1e-79
gb|AAK73108.1|AF391808_10 Fourf gag/pol protein [Zea mays] gi|16...   301   1e-79
gb|ABA95374.1| retrotransposon protein, putative, Ty1-copia subc...   301   2e-79
gb|AAP54028.1| retrotransposon protein, putative, Ty1-copia subc...   301   2e-79

>emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera]
          Length = 1096

 Score =  336 bits (861), Expect = 6e-90
 Identities = 157/215 (73%), Positives = 183/215 (85%)
 Frame = +2

Query: 104  LNGPDSQNLEAPEVEPRRSKRTKKDNSFGPDFLTYMVEDEPKTIAEALSTPEASLWKEAI 283
            +N       E  EVEPRRSKR + + SFGPDFLT+M+E EP+T  EA+++ E  +WKEAI
Sbjct: 557  INENSQDQNEEVEVEPRRSKRVRTEKSFGPDFLTFMLEGEPQTFKEAVNSTEGLMWKEAI 616

Query: 284  ESEIDSIMQNHTWEMVDLPPGCKPLGCKWILKRKYKADGTIDKYKARLVVKGYRQKEGLD 463
            +SEIDSI+QNHTWE+VDLPPGCKPL  KWI KRK K DG+IDKYKARLV+KGYRQ EGLD
Sbjct: 617  KSEIDSILQNHTWELVDLPPGCKPLSSKWIFKRKMKVDGSIDKYKARLVIKGYRQTEGLD 676

Query: 464  YFDTYSPVSRLTSIRVFIAIAALHDLEIHQMDVKTAFLNGELEEEIYMEQPEGYVVPGQE 643
            YFDTYSPV+R+ SIR+ +AIAAL +LEIHQMDVKTAFLNG+L+EEIYMEQPEG+  PGQE
Sbjct: 677  YFDTYSPVTRINSIRMVLAIAALRNLEIHQMDVKTAFLNGDLDEEIYMEQPEGFSAPGQE 736

Query: 644  QKVCRLVKSLYGLKQAPKQWHEKFDNTLLSKGFTI 748
            +KVC+LVKSLYGLKQAPKQWHEKFDN +LS GF I
Sbjct: 737  KKVCKLVKSLYGLKQAPKQWHEKFDNVMLSHGFKI 771


>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
          Length = 1316

 Score =  309 bits (792), Expect = 6e-82
 Identities = 147/206 (71%), Positives = 171/206 (83%)
 Frame = +2

Query: 131  EAPEVEPRRSKRTKKDNSFGPDFLTYMVEDEPKTIAEALSTPEASLWKEAIESEIDSIMQ 310
            E  EVEPRRSKR + + SFGPDFLT+M+E EP+T  EA+++ E  +WKEAI+SEIDSI+Q
Sbjct: 783  EEVEVEPRRSKRVRTEKSFGPDFLTFMLEGEPQTFKEAVNSTEGLMWKEAIKSEIDSILQ 842

Query: 311  NHTWEMVDLPPGCKPLGCKWILKRKYKADGTIDKYKARLVVKGYRQKEGLDYFDTYSPVS 490
            NHTWE+VDLPPGCKPL  KWI KRK K DG+IDKYKARLV+KGYRQ EGLDYFDTYSPV+
Sbjct: 843  NHTWELVDLPPGCKPLSSKWIFKRKMKVDGSIDKYKARLVIKGYRQTEGLDYFDTYSPVT 902

Query: 491  RLTSIRVFIAIAALHDLEIHQMDVKTAFLNGELEEEIYMEQPEGYVVPGQEQKVCRLVKS 670
            R+ SIR+ +AIAAL +LEIHQMD+K          EIYMEQPEG+  PGQE+KVC+LVKS
Sbjct: 903  RINSIRMVLAIAALRNLEIHQMDMK----------EIYMEQPEGFSAPGQEKKVCKLVKS 952

Query: 671  LYGLKQAPKQWHEKFDNTLLSKGFTI 748
            LYGLKQAPKQWHEKFDN +LS GF I
Sbjct: 953  LYGLKQAPKQWHEKFDNVMLSHGFKI 978


>gb|EEE67150.1| hypothetical protein OsJ_24213 [Oryza sativa Japonica Group]
          Length = 1028

 Score =  303 bits (775), Expect = 5e-80
 Identities = 143/217 (65%), Positives = 174/217 (80%)
 Frame = +2

Query: 98   PELNGPDSQNLEAPEVEPRRSKRTKKDNSFGPDFLTYMVEDEPKTIAEALSTPEASLWKE 277
            PE N P+  N+    V+ RRSKR +   SFG D++ Y+V+D P+TI EA S+P+A  WKE
Sbjct: 479  PEEN-PEEDNI----VDTRRSKRQRVAKSFGDDYIVYLVDDTPRTIEEAYSSPDADYWKE 533

Query: 278  AIESEIDSIMQNHTWEMVDLPPGCKPLGCKWILKRKYKADGTIDKYKARLVVKGYRQKEG 457
            A+ SE+DSIM N TWE V+ P GCKP+GCKW+ K+K + DGTI+KYKARLV KGY QKEG
Sbjct: 534  AVRSEMDSIMSNGTWEFVERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEG 593

Query: 458  LDYFDTYSPVSRLTSIRVFIAIAALHDLEIHQMDVKTAFLNGELEEEIYMEQPEGYVVPG 637
             D+FDTYSPV+RLT+IRV +A+AA H L +HQMDVKTAFLNGELEEEIYM+QP+GYV+ G
Sbjct: 594  EDFFDTYSPVARLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEIYMDQPDGYVLEG 653

Query: 638  QEQKVCRLVKSLYGLKQAPKQWHEKFDNTLLSKGFTI 748
            QE  VC+L+KSLYGLKQAPKQWHEKFD TL S GF +
Sbjct: 654  QEGMVCKLLKSLYGLKQAPKQWHEKFDTTLTSAGFVV 690


>dbj|BAC65862.1| hypothetical polyprotein [Oryza sativa Japonica Group]
          Length = 1268

 Score =  302 bits (774), Expect = 7e-80
 Identities = 140/212 (66%), Positives = 172/212 (81%)
 Frame = +2

Query: 113  PDSQNLEAPEVEPRRSKRTKKDNSFGPDFLTYMVEDEPKTIAEALSTPEASLWKEAIESE 292
            P+  N+    V  R+SKR +   SFG D++ Y+V+D P+TI EA S+P+A  WKEA+ SE
Sbjct: 723  PEEDNI----VATRKSKRQRTAKSFGDDYIVYLVDDTPRTIEEAYSSPDADYWKEAVRSE 778

Query: 293  IDSIMQNHTWEMVDLPPGCKPLGCKWILKRKYKADGTIDKYKARLVVKGYRQKEGLDYFD 472
            +DSIM N TWE+V+ P GCKP+GCKW+ K+K + DGTI+KYKARLV KGY QKEG D+FD
Sbjct: 779  MDSIMSNGTWEVVERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFD 838

Query: 473  TYSPVSRLTSIRVFIAIAALHDLEIHQMDVKTAFLNGELEEEIYMEQPEGYVVPGQEQKV 652
            TYSPV+RLT+IRV +A+AA H L +HQMDVKTAFLNGELEEEIYM+QP+GYV+ GQE  V
Sbjct: 839  TYSPVARLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEIYMDQPDGYVLEGQEGMV 898

Query: 653  CRLVKSLYGLKQAPKQWHEKFDNTLLSKGFTI 748
            C+L+KSLYGLKQAPKQWHEKFDNTL S GF +
Sbjct: 899  CKLLKSLYGLKQAPKQWHEKFDNTLTSAGFVV 930


>gb|ABA96132.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1357

 Score =  302 bits (774), Expect = 7e-80
 Identities = 142/217 (65%), Positives = 175/217 (80%)
 Frame = +2

Query: 98   PELNGPDSQNLEAPEVEPRRSKRTKKDNSFGPDFLTYMVEDEPKTIAEALSTPEASLWKE 277
            PE N P+  N+    V+ R+SKR +   SFG D++ Y+V+D P+TI EA S+P+A  WKE
Sbjct: 808  PEKN-PEEDNI----VDTRKSKRQRVAKSFGDDYIVYLVDDTPRTIEEAYSSPDADYWKE 862

Query: 278  AIESEIDSIMQNHTWEMVDLPPGCKPLGCKWILKRKYKADGTIDKYKARLVVKGYRQKEG 457
            A+ SE+DSIM N TWE+V+ P GCKP+GCKW+ K+K + DGTI+KYKARLV KGY QKEG
Sbjct: 863  AVRSEMDSIMSNGTWEVVERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEG 922

Query: 458  LDYFDTYSPVSRLTSIRVFIAIAALHDLEIHQMDVKTAFLNGELEEEIYMEQPEGYVVPG 637
             D+FDTYSPV+RLT+IRV +A+AA H L +HQMDVKTAFLNGELEEEIYM+QP+GYV+ G
Sbjct: 923  EDFFDTYSPVARLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEIYMDQPDGYVLEG 982

Query: 638  QEQKVCRLVKSLYGLKQAPKQWHEKFDNTLLSKGFTI 748
            QE  VC+L+KSLYGLKQAPKQWHEKFD TL S GF +
Sbjct: 983  QEGMVCKLLKSLYGLKQAPKQWHEKFDTTLTSAGFVV 1019


>gb|ABA98785.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1303

 Score =  302 bits (774), Expect = 7e-80
 Identities = 143/217 (65%), Positives = 175/217 (80%)
 Frame = +2

Query: 98   PELNGPDSQNLEAPEVEPRRSKRTKKDNSFGPDFLTYMVEDEPKTIAEALSTPEASLWKE 277
            PE N P+  N+    V+ R+SKR +   SFG D++ Y+V+D P+TI EA S+P+A  WKE
Sbjct: 864  PEEN-PEEDNI----VDTRKSKRQRVAKSFGDDYIVYLVDDTPRTIEEAYSSPDADYWKE 918

Query: 278  AIESEIDSIMQNHTWEMVDLPPGCKPLGCKWILKRKYKADGTIDKYKARLVVKGYRQKEG 457
            A+ SE+DSIM N TWE+V+ P GCKP+GCKW+ K+K + DGTI+KYKARLV KGY QKEG
Sbjct: 919  AVRSEMDSIMSNGTWEVVERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEG 978

Query: 458  LDYFDTYSPVSRLTSIRVFIAIAALHDLEIHQMDVKTAFLNGELEEEIYMEQPEGYVVPG 637
             D+FDTYSPV+RLT+IRV +A+AA H L IHQMDVKTAFLNGELEEEIYM+QP+GYV+ G
Sbjct: 979  EDFFDTYSPVARLTTIRVLLALAASHGLLIHQMDVKTAFLNGELEEEIYMDQPDGYVLEG 1038

Query: 638  QEQKVCRLVKSLYGLKQAPKQWHEKFDNTLLSKGFTI 748
            QE  VC+L+KSLYGLKQAPKQWHEKFD TL S GF +
Sbjct: 1039 QEGMVCKLLKSLYGLKQAPKQWHEKFDTTLTSAGFVV 1075


>gb|ABF94664.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1286

 Score =  302 bits (774), Expect = 7e-80
 Identities = 142/217 (65%), Positives = 176/217 (81%)
 Frame = +2

Query: 98   PELNGPDSQNLEAPEVEPRRSKRTKKDNSFGPDFLTYMVEDEPKTIAEALSTPEASLWKE 277
            PE N P+  N+    V+ R+SKR +   SFG D++ Y+V+D P+TI EA S+P+A  WKE
Sbjct: 737  PEEN-PEEDNI----VDTRKSKRQRVAKSFGDDYIVYLVDDTPRTIEEAYSSPDADYWKE 791

Query: 278  AIESEIDSIMQNHTWEMVDLPPGCKPLGCKWILKRKYKADGTIDKYKARLVVKGYRQKEG 457
            A+ SE+DSIM N TWE+V+ P GCKP+GCKW+ K+K + DGTI+KYKARLV KGY QKEG
Sbjct: 792  AVRSEMDSIMSNGTWEVVERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEG 851

Query: 458  LDYFDTYSPVSRLTSIRVFIAIAALHDLEIHQMDVKTAFLNGELEEEIYMEQPEGYVVPG 637
             D+FDTYSPV+RLT+IRV +A+AA H L +HQMDVKTAFLNGELEEEIYM+QP+GYV+ G
Sbjct: 852  EDFFDTYSPVARLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEIYMDQPDGYVLEG 911

Query: 638  QEQKVCRLVKSLYGLKQAPKQWHEKFDNTLLSKGFTI 748
            QE+ VC+L+KSLYGLKQAPKQWHEKFD TL S GF +
Sbjct: 912  QEEMVCKLLKSLYGLKQAPKQWHEKFDITLTSAGFVV 948


>gb|AAM94928.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 619

 Score =  302 bits (773), Expect = 9e-80
 Identities = 142/217 (65%), Positives = 175/217 (80%)
 Frame = +2

Query: 98  PELNGPDSQNLEAPEVEPRRSKRTKKDNSFGPDFLTYMVEDEPKTIAEALSTPEASLWKE 277
           PE N P+  N+    V+ R+SKR +   SFG D++ Y+V+D P+TI EA S+P+A  WKE
Sbjct: 287 PEEN-PEEDNI----VDTRKSKRQRVAKSFGDDYIVYLVDDTPRTIEEAYSSPDADYWKE 341

Query: 278 AIESEIDSIMQNHTWEMVDLPPGCKPLGCKWILKRKYKADGTIDKYKARLVVKGYRQKEG 457
           A+ SE+DSIM N TWE+V+ P GCKP+GCKW+ K+K + DGTI+KYKARLV KGY QKEG
Sbjct: 342 AVRSEMDSIMSNGTWEVVERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEG 401

Query: 458 LDYFDTYSPVSRLTSIRVFIAIAALHDLEIHQMDVKTAFLNGELEEEIYMEQPEGYVVPG 637
            D+FDTYSPV+RLT+IRV +A+AA H L +HQMDVKTAFLNGELEEEIYM+QP+GYV+ G
Sbjct: 402 EDFFDTYSPVARLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEIYMDQPDGYVLEG 461

Query: 638 QEQKVCRLVKSLYGLKQAPKQWHEKFDNTLLSKGFTI 748
           QE  VC+L+KSLYGLKQAPKQWHEKFD TL S GF +
Sbjct: 462 QEGMVCKLLKSLYGLKQAPKQWHEKFDTTLTSAGFVV 498


>emb|CAH66912.1| OSIGBa0126B18.5 [Oryza sativa Indica Group]
          Length = 1413

 Score =  302 bits (773), Expect = 9e-80
 Identities = 142/217 (65%), Positives = 175/217 (80%)
 Frame = +2

Query: 98   PELNGPDSQNLEAPEVEPRRSKRTKKDNSFGPDFLTYMVEDEPKTIAEALSTPEASLWKE 277
            PE N P+  N+    V+ R+SKR +   SFG D++ Y+V+D P+TI EA S+P+A  WKE
Sbjct: 864  PEEN-PEEDNI----VDTRKSKRQRVAKSFGDDYIVYLVDDTPRTIEEAYSSPDADYWKE 918

Query: 278  AIESEIDSIMQNHTWEMVDLPPGCKPLGCKWILKRKYKADGTIDKYKARLVVKGYRQKEG 457
            A+ SE+DSIM N TWE+V+ P GCKP+GCKW+ K+K + DGTI+KYKARLV KGY QKEG
Sbjct: 919  AVRSEMDSIMSNGTWEVVERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEG 978

Query: 458  LDYFDTYSPVSRLTSIRVFIAIAALHDLEIHQMDVKTAFLNGELEEEIYMEQPEGYVVPG 637
             D+FDTYSPV+RLT+IRV +A+AA H L +HQMDVKTAFLNGELEEEIYM+QP+GYV+ G
Sbjct: 979  EDFFDTYSPVARLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEIYMDQPDGYVLEG 1038

Query: 638  QEQKVCRLVKSLYGLKQAPKQWHEKFDNTLLSKGFTI 748
            QE  VC+L+KSLYGLKQAPKQWHEKFD TL S GF +
Sbjct: 1039 QEGMVCKLLKSLYGLKQAPKQWHEKFDTTLTSAGFVV 1075


>gb|ABB47865.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1126

 Score =  302 bits (773), Expect = 9e-80
 Identities = 142/217 (65%), Positives = 175/217 (80%)
 Frame = +2

Query: 98   PELNGPDSQNLEAPEVEPRRSKRTKKDNSFGPDFLTYMVEDEPKTIAEALSTPEASLWKE 277
            PE N P+  N+    V+ R+SKR +   SFG D++ Y+V+D P+TI EA S+P+A  WKE
Sbjct: 608  PEEN-PEEDNI----VDTRKSKRQRVAKSFGDDYIVYLVDDTPRTIEEAYSSPDADYWKE 662

Query: 278  AIESEIDSIMQNHTWEMVDLPPGCKPLGCKWILKRKYKADGTIDKYKARLVVKGYRQKEG 457
            A+ SE+DSIM N TWE+V+ P GCKP+GCKW+ K+K + DGTI+KYKARLV KGY QKEG
Sbjct: 663  AVRSEMDSIMSNGTWEVVERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEG 722

Query: 458  LDYFDTYSPVSRLTSIRVFIAIAALHDLEIHQMDVKTAFLNGELEEEIYMEQPEGYVVPG 637
             D+FDTYSPV+RLT+IRV +A+AA H L +HQMDVKTAFLNGELEEEIYM+QP+GYV+ G
Sbjct: 723  EDFFDTYSPVARLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEIYMDQPDGYVLEG 782

Query: 638  QEQKVCRLVKSLYGLKQAPKQWHEKFDNTLLSKGFTI 748
            QE  VC+L+KSLYGLKQAPKQWHEKFD TL S GF +
Sbjct: 783  QEGMVCKLLKSLYGLKQAPKQWHEKFDTTLTSAGFVV 819


>gb|AAV43959.2| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1268

 Score =  302 bits (773), Expect = 9e-80
 Identities = 142/217 (65%), Positives = 175/217 (80%)
 Frame = +2

Query: 98   PELNGPDSQNLEAPEVEPRRSKRTKKDNSFGPDFLTYMVEDEPKTIAEALSTPEASLWKE 277
            PE N P+  N+    V+ R+SKR +   SFG D++ Y+V+D P+TI EA S+P+A  WKE
Sbjct: 719  PEEN-PEEDNI----VDTRKSKRQRVAKSFGDDYIVYLVDDTPRTIEEAYSSPDADYWKE 773

Query: 278  AIESEIDSIMQNHTWEMVDLPPGCKPLGCKWILKRKYKADGTIDKYKARLVVKGYRQKEG 457
            A+ SE+DSIM N TWE+V+ P GCKP+GCKW+ K+K + DGTI+KYKARLV KGY QKEG
Sbjct: 774  AVRSEMDSIMSNGTWEVVERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEG 833

Query: 458  LDYFDTYSPVSRLTSIRVFIAIAALHDLEIHQMDVKTAFLNGELEEEIYMEQPEGYVVPG 637
             D+FDTYSPV+RLT+IRV +A+AA H L +HQMDVKTAFLNGELEEEIYM+QP+GYV+ G
Sbjct: 834  EDFFDTYSPVARLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEIYMDQPDGYVLEG 893

Query: 638  QEQKVCRLVKSLYGLKQAPKQWHEKFDNTLLSKGFTI 748
            QE  VC+L+KSLYGLKQAPKQWHEKFD TL S GF +
Sbjct: 894  QEGMVCKLLKSLYGLKQAPKQWHEKFDTTLTSAGFVV 930


>gb|AAP50927.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108708705|gb|ABF96500.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1240

 Score =  302 bits (773), Expect = 9e-80
 Identities = 142/217 (65%), Positives = 175/217 (80%)
 Frame = +2

Query: 98   PELNGPDSQNLEAPEVEPRRSKRTKKDNSFGPDFLTYMVEDEPKTIAEALSTPEASLWKE 277
            PE N P+  N+    V+ R+SKR +   SFG D++ Y+V+D P+TI EA S+P+A  WKE
Sbjct: 719  PEEN-PEEDNI----VDTRKSKRQRVAKSFGDDYIVYLVDDTPRTIEEAYSSPDADYWKE 773

Query: 278  AIESEIDSIMQNHTWEMVDLPPGCKPLGCKWILKRKYKADGTIDKYKARLVVKGYRQKEG 457
            A+ SE+DSIM N TWE+V+ P GCKP+GCKW+ K+K + DGTI+KYKARLV KGY QKEG
Sbjct: 774  AVRSEMDSIMSNGTWEVVERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEG 833

Query: 458  LDYFDTYSPVSRLTSIRVFIAIAALHDLEIHQMDVKTAFLNGELEEEIYMEQPEGYVVPG 637
             D+FDTYSPV+RLT+IRV +A+AA H L +HQMDVKTAFLNGELEEEIYM+QP+GYV+ G
Sbjct: 834  EDFFDTYSPVARLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEIYMDQPDGYVLEG 893

Query: 638  QEQKVCRLVKSLYGLKQAPKQWHEKFDNTLLSKGFTI 748
            QE  VC+L+KSLYGLKQAPKQWHEKFD TL S GF +
Sbjct: 894  QEGMVCKLLKSLYGLKQAPKQWHEKFDTTLTSAGFVV 930


>gb|AAM95676.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1138

 Score =  302 bits (773), Expect = 9e-80
 Identities = 142/217 (65%), Positives = 175/217 (80%)
 Frame = +2

Query: 98   PELNGPDSQNLEAPEVEPRRSKRTKKDNSFGPDFLTYMVEDEPKTIAEALSTPEASLWKE 277
            PE N P+  N+    V+ R+SKR +   SFG D++ Y+V+D P+TI EA S+P+A  WKE
Sbjct: 620  PEEN-PEEDNI----VDTRKSKRQRVAKSFGDDYIVYLVDDTPRTIEEAYSSPDADYWKE 674

Query: 278  AIESEIDSIMQNHTWEMVDLPPGCKPLGCKWILKRKYKADGTIDKYKARLVVKGYRQKEG 457
            A+ SE+DSIM N TWE+V+ P GCKP+GCKW+ K+K + DGTI+KYKARLV KGY QKEG
Sbjct: 675  AVRSEMDSIMSNGTWEVVERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEG 734

Query: 458  LDYFDTYSPVSRLTSIRVFIAIAALHDLEIHQMDVKTAFLNGELEEEIYMEQPEGYVVPG 637
             D+FDTYSPV+RLT+IRV +A+AA H L +HQMDVKTAFLNGELEEEIYM+QP+GYV+ G
Sbjct: 735  EDFFDTYSPVARLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEIYMDQPDGYVLEG 794

Query: 638  QEQKVCRLVKSLYGLKQAPKQWHEKFDNTLLSKGFTI 748
            QE  VC+L+KSLYGLKQAPKQWHEKFD TL S GF +
Sbjct: 795  QEGMVCKLLKSLYGLKQAPKQWHEKFDTTLTSAGFVV 831


>gb|AAK39592.1|AC025296_27 putative retrotransposon polyprotein [Oryza sativa Japonica Group]
          Length = 804

 Score =  301 bits (772), Expect = 1e-79
 Identities = 142/217 (65%), Positives = 175/217 (80%)
 Frame = +2

Query: 98  PELNGPDSQNLEAPEVEPRRSKRTKKDNSFGPDFLTYMVEDEPKTIAEALSTPEASLWKE 277
           PE N P+  N+    V+ R+SKR +   SFG D++ Y+V+D P+TI EA S+P+A  WKE
Sbjct: 255 PEEN-PEEDNI----VDTRKSKRQRVAKSFGDDYIVYLVDDTPRTIEEAYSSPDADYWKE 309

Query: 278 AIESEIDSIMQNHTWEMVDLPPGCKPLGCKWILKRKYKADGTIDKYKARLVVKGYRQKEG 457
           A+ SE+DSIM N TWE+V+ P GCKP+GCKW+ K+K + DGTI+KYKARLV KGY QKEG
Sbjct: 310 AVRSEMDSIMSNGTWEVVEHPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEG 369

Query: 458 LDYFDTYSPVSRLTSIRVFIAIAALHDLEIHQMDVKTAFLNGELEEEIYMEQPEGYVVPG 637
            D+FDTYSPV+RLT+IRV +A+AA H L +HQMDVKTAFLNGELEEEIYM+QP+GYV+ G
Sbjct: 370 EDFFDTYSPVARLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEIYMDQPDGYVLEG 429

Query: 638 QEQKVCRLVKSLYGLKQAPKQWHEKFDNTLLSKGFTI 748
           QE  VC+L+KSLYGLKQAPKQWHEKFD TL S GF +
Sbjct: 430 QEGMVCKLLKSLYGLKQAPKQWHEKFDTTLTSAGFVV 466


>gb|ABG66192.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1457

 Score =  301 bits (772), Expect = 1e-79
 Identities = 142/217 (65%), Positives = 175/217 (80%)
 Frame = +2

Query: 98   PELNGPDSQNLEAPEVEPRRSKRTKKDNSFGPDFLTYMVEDEPKTIAEALSTPEASLWKE 277
            PE N P+  N+    V+ R+SKR +   SFG D++ Y+V+D P+TI EA S+P+A  WKE
Sbjct: 908  PEEN-PEEDNI----VDTRKSKRQRVAKSFGDDYIVYLVDDTPRTIEEAYSSPDADYWKE 962

Query: 278  AIESEIDSIMQNHTWEMVDLPPGCKPLGCKWILKRKYKADGTIDKYKARLVVKGYRQKEG 457
            A+ SE+DSIM N TWE+V+ P GCKP+GCKW+ K+K + DGTI+KYKARLV KGY QKEG
Sbjct: 963  AVRSEMDSIMSNGTWEVVEHPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEG 1022

Query: 458  LDYFDTYSPVSRLTSIRVFIAIAALHDLEIHQMDVKTAFLNGELEEEIYMEQPEGYVVPG 637
             D+FDTYSPV+RLT+IRV +A+AA H L +HQMDVKTAFLNGELEEEIYM+QP+GYV+ G
Sbjct: 1023 EDFFDTYSPVARLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEIYMDQPDGYVLEG 1082

Query: 638  QEQKVCRLVKSLYGLKQAPKQWHEKFDNTLLSKGFTI 748
            QE  VC+L+KSLYGLKQAPKQWHEKFD TL S GF +
Sbjct: 1083 QEGMVCKLLKSLYGLKQAPKQWHEKFDTTLTSAGFVV 1119


>gb|ABF99156.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1413

 Score =  301 bits (772), Expect = 1e-79
 Identities = 142/217 (65%), Positives = 175/217 (80%)
 Frame = +2

Query: 98   PELNGPDSQNLEAPEVEPRRSKRTKKDNSFGPDFLTYMVEDEPKTIAEALSTPEASLWKE 277
            PE N P+  N+    V+ R+SKR +   SFG D++ Y+V+D P+TI EA S+P+A  WKE
Sbjct: 864  PEEN-PEEDNI----VDTRKSKRQRVVKSFGDDYIVYLVDDTPRTIEEAYSSPDADYWKE 918

Query: 278  AIESEIDSIMQNHTWEMVDLPPGCKPLGCKWILKRKYKADGTIDKYKARLVVKGYRQKEG 457
            A+ SE+DSIM N TWE+V+ P GCKP+GCKW+ K+K + DGTI+KYKARLV KGY QKEG
Sbjct: 919  AVRSEMDSIMSNGTWEIVERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEG 978

Query: 458  LDYFDTYSPVSRLTSIRVFIAIAALHDLEIHQMDVKTAFLNGELEEEIYMEQPEGYVVPG 637
             D+FDTYSPV+RLT+IRV +A+AA H L +HQMDVKTAFLNGELEEEIYM+QP+GYV+ G
Sbjct: 979  EDFFDTYSPVARLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEIYMDQPDGYVLEG 1038

Query: 638  QEQKVCRLVKSLYGLKQAPKQWHEKFDNTLLSKGFTI 748
            QE  VC+L+KSLYGLKQAPKQWHEKFD TL S GF +
Sbjct: 1039 QEGMVCKLLKSLYGLKQAPKQWHEKFDTTLTSAGFVV 1075


>gb|AAM19019.1|AC084748_9 putative polyprotein [Oryza sativa Japonica Group]
          Length = 1394

 Score =  301 bits (772), Expect = 1e-79
 Identities = 142/217 (65%), Positives = 175/217 (80%)
 Frame = +2

Query: 98   PELNGPDSQNLEAPEVEPRRSKRTKKDNSFGPDFLTYMVEDEPKTIAEALSTPEASLWKE 277
            PE N P+  N+    V+ R+SKR +   SFG D++ Y+V+D P+TI EA S+P+A  WKE
Sbjct: 845  PEEN-PEEDNI----VDTRKSKRQRVVKSFGDDYIVYLVDDTPRTIEEAYSSPDADYWKE 899

Query: 278  AIESEIDSIMQNHTWEMVDLPPGCKPLGCKWILKRKYKADGTIDKYKARLVVKGYRQKEG 457
            A+ SE+DSIM N TWE+V+ P GCKP+GCKW+ K+K + DGTI+KYKARLV KGY QKEG
Sbjct: 900  AVRSEMDSIMSNGTWEIVERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEG 959

Query: 458  LDYFDTYSPVSRLTSIRVFIAIAALHDLEIHQMDVKTAFLNGELEEEIYMEQPEGYVVPG 637
             D+FDTYSPV+RLT+IRV +A+AA H L +HQMDVKTAFLNGELEEEIYM+QP+GYV+ G
Sbjct: 960  EDFFDTYSPVARLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEIYMDQPDGYVLEG 1019

Query: 638  QEQKVCRLVKSLYGLKQAPKQWHEKFDNTLLSKGFTI 748
            QE  VC+L+KSLYGLKQAPKQWHEKFD TL S GF +
Sbjct: 1020 QEGMVCKLLKSLYGLKQAPKQWHEKFDTTLTSAGFVV 1056


>gb|AAK73108.1|AF391808_10 Fourf gag/pol protein [Zea mays] gi|168251067|gb|ACA21850.1| Fourf
            gag/pol protein [Zea mays]
          Length = 1279

 Score =  301 bits (772), Expect = 1e-79
 Identities = 139/206 (67%), Positives = 169/206 (82%)
 Frame = +2

Query: 131  EAPEVEPRRSKRTKKDNSFGPDFLTYMVEDEPKTIAEALSTPEASLWKEAIESEIDSIMQ 310
            E   +  R+SKR +   SFG DF+ Y+VED P TI+EA S+P+A LWKEA+ SE++SIM 
Sbjct: 736  EDDTIVTRKSKRQRVAKSFGNDFIVYLVEDTPTTISEAYSSPDADLWKEAVRSEMESIMS 795

Query: 311  NHTWEMVDLPPGCKPLGCKWILKRKYKADGTIDKYKARLVVKGYRQKEGLDYFDTYSPVS 490
            N TWE+VD P GC+P+GCKWI K+K + DGTI++YKARLV KGY QKEG D+FDTYSPV+
Sbjct: 796  NGTWEVVDRPYGCQPIGCKWIFKKKLRPDGTIERYKARLVAKGYTQKEGEDFFDTYSPVA 855

Query: 491  RLTSIRVFIAIAALHDLEIHQMDVKTAFLNGELEEEIYMEQPEGYVVPGQEQKVCRLVKS 670
            RLT+IR  IA+AA + L IHQMDVKTAFLNGEL+EEIYM+QPEG++  GQE KVCRL+KS
Sbjct: 856  RLTTIRTLIAVAASYGLIIHQMDVKTAFLNGELDEEIYMDQPEGFIADGQENKVCRLIKS 915

Query: 671  LYGLKQAPKQWHEKFDNTLLSKGFTI 748
            LYGLKQAPKQWHEKFDNTL + GF +
Sbjct: 916  LYGLKQAPKQWHEKFDNTLTAAGFVV 941


>gb|ABA95374.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1314

 Score =  301 bits (771), Expect = 2e-79
 Identities = 140/219 (63%), Positives = 173/219 (78%)
 Frame = +2

Query: 92   DYPELNGPDSQNLEAPEVEPRRSKRTKKDNSFGPDFLTYMVEDEPKTIAEALSTPEASLW 271
            D      P+  N+    V+ R+SKR +   SFG D++ Y+V+D P+TI EA S+P+A  W
Sbjct: 888  DQTPKENPEEDNI----VDTRKSKRQRVAKSFGDDYIVYLVDDTPRTIEEAYSSPDADYW 943

Query: 272  KEAIESEIDSIMQNHTWEMVDLPPGCKPLGCKWILKRKYKADGTIDKYKARLVVKGYRQK 451
            KEA+ SE+DSIM N TWE+V+ P GCKP+GCKW+ K+K + DGTI+KYKARLV KGY QK
Sbjct: 944  KEAVRSEMDSIMSNGTWEVVERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQK 1003

Query: 452  EGLDYFDTYSPVSRLTSIRVFIAIAALHDLEIHQMDVKTAFLNGELEEEIYMEQPEGYVV 631
            EG D+FDTYSPV+RLT+IRV +A+AA H L +HQMDVKTAFLNGELEEEIYM+QP+GYV+
Sbjct: 1004 EGEDFFDTYSPVARLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEIYMDQPDGYVL 1063

Query: 632  PGQEQKVCRLVKSLYGLKQAPKQWHEKFDNTLLSKGFTI 748
             GQE  VC+L+KSLYGLKQAPKQWHEKFD TL S GF +
Sbjct: 1064 EGQEGMVCKLLKSLYGLKQAPKQWHEKFDTTLTSAGFVV 1102


>gb|AAP54028.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1361

 Score =  301 bits (770), Expect = 2e-79
 Identities = 142/217 (65%), Positives = 175/217 (80%)
 Frame = +2

Query: 98   PELNGPDSQNLEAPEVEPRRSKRTKKDNSFGPDFLTYMVEDEPKTIAEALSTPEASLWKE 277
            PE N P+  N+    V+ R+SKR +   SFG D++ Y+V+D P+TI EA S+P+A  WKE
Sbjct: 886  PEEN-PEEDNI----VDTRKSKRQRVAKSFGDDYIVYLVDDTPRTIEEAYSSPDADYWKE 940

Query: 278  AIESEIDSIMQNHTWEMVDLPPGCKPLGCKWILKRKYKADGTIDKYKARLVVKGYRQKEG 457
            A+ SE+DSIM N TWE+V+ P GCKP+GCKW+ K+K + DGTI+KYKARLV KGY QKEG
Sbjct: 941  AVRSEMDSIMSNGTWEVVERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEG 1000

Query: 458  LDYFDTYSPVSRLTSIRVFIAIAALHDLEIHQMDVKTAFLNGELEEEIYMEQPEGYVVPG 637
             D+FDTYSPV+RLT+IRV +A+AA H L +HQMDVKTAFLNGELEEEIYM+QP+GYV+ G
Sbjct: 1001 EDFFDTYSPVARLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEIYMDQPDGYVLEG 1060

Query: 638  QEQKVCRLVKSLYGLKQAPKQWHEKFDNTLLSKGFTI 748
            QE  VC+L+KSLYGLKQAPKQWHEKFD TL S GF +
Sbjct: 1061 QEGMVCKLLKSLYGLKQAPKQWHEKFDITLTSAGFVV 1097