BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00000201
         (499 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006349344.1| PREDICTED: ribosome biogenesis protein BOP1 ...   119   6e-25
ref|XP_004230463.1| PREDICTED: ribosome biogenesis protein BOP1 ...   119   6e-25
ref|XP_006349342.1| PREDICTED: ATP-dependent RNA helicase Dhx29-...   112   4e-23
ref|XP_004231331.1| PREDICTED: ATP-dependent RNA helicase Dhx29-...   110   1e-22
gb|EOX97128.1| ATP-dependent RNA helicase, putative isoform 4 [T...   107   1e-21
gb|EOX97127.1| ATP-dependent RNA helicase, putative isoform 3 [T...   107   1e-21
gb|EOX97125.1| ATP-dependent RNA helicase, putative isoform 1 [T...   107   1e-21
ref|XP_006494371.1| PREDICTED: ATP-dependent RNA helicase DHX29-...   106   3e-21
ref|XP_006494370.1| PREDICTED: ATP-dependent RNA helicase DHX29-...   106   3e-21
ref|XP_006300903.1| hypothetical protein CARUB_v10021272mg [Caps...   106   4e-21
gb|AAG50701.1|AC079604_8 hypothetical protein [Arabidopsis thali...   106   4e-21
ref|NP_176103.2| RNA helicase family protein [Arabidopsis thalia...   106   4e-21
ref|XP_002888226.1| helicase domain-containing protein [Arabidop...   106   4e-21
ref|XP_006392346.1| hypothetical protein EUTSA_v10023215mg [Eutr...   105   5e-21
gb|EMJ26663.1| hypothetical protein PRUPE_ppa000230mg [Prunus pe...   105   8e-21
gb|ESW25901.1| hypothetical protein PHAVU_003G075000g [Phaseolus...   104   1e-20
ref|XP_006385023.1| hypothetical protein POPTR_0004s231601g, par...   104   1e-20
ref|XP_004499379.1| PREDICTED: ATP-dependent RNA helicase DHX29-...   104   1e-20
ref|XP_004499378.1| PREDICTED: ATP-dependent RNA helicase DHX29-...   104   1e-20
ref|XP_006431710.1| hypothetical protein CICLE_v100000302mg, par...   103   2e-20

>ref|XP_006349344.1| PREDICTED: ribosome biogenesis protein BOP1 homolog [Solanum
           tuberosum]
          Length = 752

 Score =  119 bits (297), Expect = 6e-25
 Identities = 58/66 (87%), Positives = 60/66 (90%)
 Frame = -3

Query: 200 PFVYPKDEVVQYVRAIRKGLIKFDEKPKEEPSAYLLRGDDSSAIDRQGLAYIPAPKPKLP 21
           P  +   +VVQYVRAIRKGLIKFDEKPKEEPSAYLL GDDSSAIDRQGLAYIPAPKPKLP
Sbjct: 256 PSKWESKKVVQYVRAIRKGLIKFDEKPKEEPSAYLLWGDDSSAIDRQGLAYIPAPKPKLP 315

Query: 20  GHEESY 3
           GHEESY
Sbjct: 316 GHEESY 321


>ref|XP_004230463.1| PREDICTED: ribosome biogenesis protein BOP1 homolog [Solanum
           lycopersicum]
          Length = 757

 Score =  119 bits (297), Expect = 6e-25
 Identities = 58/66 (87%), Positives = 60/66 (90%)
 Frame = -3

Query: 200 PFVYPKDEVVQYVRAIRKGLIKFDEKPKEEPSAYLLRGDDSSAIDRQGLAYIPAPKPKLP 21
           P  +   +VVQYVRAIRKGLIKFDEKPKEEPSAYLL GDDSSAIDRQGLAYIPAPKPKLP
Sbjct: 261 PSKWESKKVVQYVRAIRKGLIKFDEKPKEEPSAYLLWGDDSSAIDRQGLAYIPAPKPKLP 320

Query: 20  GHEESY 3
           GHEESY
Sbjct: 321 GHEESY 326


>ref|XP_006349342.1| PREDICTED: ATP-dependent RNA helicase Dhx29-like [Solanum tuberosum]
          Length = 1438

 Score =  112 bits (281), Expect = 4e-23
 Identities = 59/73 (80%), Positives = 61/73 (83%), Gaps = 1/73 (1%)
 Frame = -3

Query: 371  SIYVQVGAVEWDEELTPLGYHLARLPVDVLVGKMLLYGGVFGCLSPILSISTFL-VTSPF 195
            S+  +VGAVE DEELTPLGYHLARLPVDVLVGKMLLYGGVFGCLSPILSIS FL   SPF
Sbjct: 1080 SLLYEVGAVEGDEELTPLGYHLARLPVDVLVGKMLLYGGVFGCLSPILSISAFLSYKSPF 1139

Query: 194  VYPKDEVVQYVRA 156
            VYPKDE     RA
Sbjct: 1140 VYPKDERQNVERA 1152


>ref|XP_004231331.1| PREDICTED: ATP-dependent RNA helicase Dhx29-like [Solanum
            lycopersicum]
          Length = 1453

 Score =  110 bits (276), Expect = 1e-22
 Identities = 58/73 (79%), Positives = 61/73 (83%), Gaps = 1/73 (1%)
 Frame = -3

Query: 371  SIYVQVGAVEWDEELTPLGYHLARLPVDVLVGKMLLYGGVFGCLSPILSISTFL-VTSPF 195
            S+  +VGAVE +EELTPLGYHLARLPVDVLVGKMLLYGGVFGCLSPILSIS FL   SPF
Sbjct: 1095 SLLYEVGAVEGNEELTPLGYHLARLPVDVLVGKMLLYGGVFGCLSPILSISAFLSYKSPF 1154

Query: 194  VYPKDEVVQYVRA 156
            VYPKDE     RA
Sbjct: 1155 VYPKDERQNVERA 1167


>gb|EOX97128.1| ATP-dependent RNA helicase, putative isoform 4 [Theobroma cacao]
          Length = 991

 Score =  107 bits (268), Expect = 1e-21
 Identities = 53/73 (72%), Positives = 61/73 (83%), Gaps = 1/73 (1%)
 Frame = -3

Query: 371 SIYVQVGAVEWDEELTPLGYHLARLPVDVLVGKMLLYGGVFGCLSPILSISTFL-VTSPF 195
           S+  +VGA+E DEELTPLG+HLA+LPVDVL+GKMLLYGG+FGCLSPILSIS FL   SPF
Sbjct: 634 SLLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMLLYGGIFGCLSPILSISAFLSYKSPF 693

Query: 194 VYPKDEVVQYVRA 156
           +YPKDE     RA
Sbjct: 694 LYPKDEKQNVERA 706


>gb|EOX97127.1| ATP-dependent RNA helicase, putative isoform 3 [Theobroma cacao]
          Length = 1305

 Score =  107 bits (268), Expect = 1e-21
 Identities = 53/73 (72%), Positives = 61/73 (83%), Gaps = 1/73 (1%)
 Frame = -3

Query: 371  SIYVQVGAVEWDEELTPLGYHLARLPVDVLVGKMLLYGGVFGCLSPILSISTFL-VTSPF 195
            S+  +VGA+E DEELTPLG+HLA+LPVDVL+GKMLLYGG+FGCLSPILSIS FL   SPF
Sbjct: 1100 SLLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMLLYGGIFGCLSPILSISAFLSYKSPF 1159

Query: 194  VYPKDEVVQYVRA 156
            +YPKDE     RA
Sbjct: 1160 LYPKDEKQNVERA 1172


>gb|EOX97125.1| ATP-dependent RNA helicase, putative isoform 1 [Theobroma cacao]
            gi|508705230|gb|EOX97126.1| ATP-dependent RNA helicase,
            putative isoform 1 [Theobroma cacao]
          Length = 1457

 Score =  107 bits (268), Expect = 1e-21
 Identities = 53/73 (72%), Positives = 61/73 (83%), Gaps = 1/73 (1%)
 Frame = -3

Query: 371  SIYVQVGAVEWDEELTPLGYHLARLPVDVLVGKMLLYGGVFGCLSPILSISTFL-VTSPF 195
            S+  +VGA+E DEELTPLG+HLA+LPVDVL+GKMLLYGG+FGCLSPILSIS FL   SPF
Sbjct: 1100 SLLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMLLYGGIFGCLSPILSISAFLSYKSPF 1159

Query: 194  VYPKDEVVQYVRA 156
            +YPKDE     RA
Sbjct: 1160 LYPKDEKQNVERA 1172


>ref|XP_006494371.1| PREDICTED: ATP-dependent RNA helicase DHX29-like isoform X2 [Citrus
            sinensis]
          Length = 1245

 Score =  106 bits (265), Expect = 3e-21
 Identities = 51/73 (69%), Positives = 61/73 (83%), Gaps = 1/73 (1%)
 Frame = -3

Query: 371  SIYVQVGAVEWDEELTPLGYHLARLPVDVLVGKMLLYGGVFGCLSPILSISTFL-VTSPF 195
            S+  +VGA+E DEELTPLG+HLA+LPVDVL+GKM+L+GG+FGCLSPILSIS FL   SPF
Sbjct: 887  SVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPF 946

Query: 194  VYPKDEVVQYVRA 156
            +YPKDE     RA
Sbjct: 947  IYPKDEKQNVERA 959


>ref|XP_006494370.1| PREDICTED: ATP-dependent RNA helicase DHX29-like isoform X1 [Citrus
            sinensis]
          Length = 1455

 Score =  106 bits (265), Expect = 3e-21
 Identities = 51/73 (69%), Positives = 61/73 (83%), Gaps = 1/73 (1%)
 Frame = -3

Query: 371  SIYVQVGAVEWDEELTPLGYHLARLPVDVLVGKMLLYGGVFGCLSPILSISTFL-VTSPF 195
            S+  +VGA+E DEELTPLG+HLA+LPVDVL+GKM+L+GG+FGCLSPILSIS FL   SPF
Sbjct: 1097 SVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPF 1156

Query: 194  VYPKDEVVQYVRA 156
            +YPKDE     RA
Sbjct: 1157 IYPKDEKQNVERA 1169


>ref|XP_006300903.1| hypothetical protein CARUB_v10021272mg [Capsella rubella]
            gi|482569613|gb|EOA33801.1| hypothetical protein
            CARUB_v10021272mg [Capsella rubella]
          Length = 1455

 Score =  106 bits (264), Expect = 4e-21
 Identities = 51/66 (77%), Positives = 59/66 (89%), Gaps = 1/66 (1%)
 Frame = -3

Query: 371  SIYVQVGAVEWDEELTPLGYHLARLPVDVLVGKMLLYGGVFGCLSPILSISTFL-VTSPF 195
            S+  +VGAVE DEELTPLG+HLA+LPVDVL+GKMLLYGG+FGCLSPILSI+ FL   SPF
Sbjct: 1097 SLLHEVGAVEGDEELTPLGHHLAKLPVDVLIGKMLLYGGIFGCLSPILSIAAFLSYKSPF 1156

Query: 194  VYPKDE 177
            +YPKDE
Sbjct: 1157 IYPKDE 1162


>gb|AAG50701.1|AC079604_8 hypothetical protein [Arabidopsis thaliana]
          Length = 1453

 Score =  106 bits (264), Expect = 4e-21
 Identities = 51/66 (77%), Positives = 59/66 (89%), Gaps = 1/66 (1%)
 Frame = -3

Query: 371  SIYVQVGAVEWDEELTPLGYHLARLPVDVLVGKMLLYGGVFGCLSPILSISTFL-VTSPF 195
            S+  +VGAVE DEELTPLG+HLA+LPVDVL+GKMLLYGG+FGCLSPILSI+ FL   SPF
Sbjct: 1101 SLLHEVGAVEGDEELTPLGHHLAKLPVDVLIGKMLLYGGIFGCLSPILSIAAFLSYKSPF 1160

Query: 194  VYPKDE 177
            +YPKDE
Sbjct: 1161 IYPKDE 1166


>ref|NP_176103.2| RNA helicase family protein [Arabidopsis thaliana]
            gi|332195372|gb|AEE33493.1| RNA helicase family protein
            [Arabidopsis thaliana]
          Length = 1459

 Score =  106 bits (264), Expect = 4e-21
 Identities = 51/66 (77%), Positives = 59/66 (89%), Gaps = 1/66 (1%)
 Frame = -3

Query: 371  SIYVQVGAVEWDEELTPLGYHLARLPVDVLVGKMLLYGGVFGCLSPILSISTFL-VTSPF 195
            S+  +VGAVE DEELTPLG+HLA+LPVDVL+GKMLLYGG+FGCLSPILSI+ FL   SPF
Sbjct: 1101 SLLHEVGAVEGDEELTPLGHHLAKLPVDVLIGKMLLYGGIFGCLSPILSIAAFLSYKSPF 1160

Query: 194  VYPKDE 177
            +YPKDE
Sbjct: 1161 IYPKDE 1166


>ref|XP_002888226.1| helicase domain-containing protein [Arabidopsis lyrata subsp. lyrata]
            gi|297334067|gb|EFH64485.1| helicase domain-containing
            protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1458

 Score =  106 bits (264), Expect = 4e-21
 Identities = 51/66 (77%), Positives = 59/66 (89%), Gaps = 1/66 (1%)
 Frame = -3

Query: 371  SIYVQVGAVEWDEELTPLGYHLARLPVDVLVGKMLLYGGVFGCLSPILSISTFL-VTSPF 195
            S+  +VGAVE DEELTPLG+HLA+LPVDVL+GKMLLYGG+FGCLSPILSI+ FL   SPF
Sbjct: 1100 SLLHEVGAVEGDEELTPLGHHLAKLPVDVLIGKMLLYGGIFGCLSPILSIAAFLSYKSPF 1159

Query: 194  VYPKDE 177
            +YPKDE
Sbjct: 1160 IYPKDE 1165


>ref|XP_006392346.1| hypothetical protein EUTSA_v10023215mg [Eutrema salsugineum]
            gi|557088852|gb|ESQ29632.1| hypothetical protein
            EUTSA_v10023215mg [Eutrema salsugineum]
          Length = 1455

 Score =  105 bits (263), Expect = 5e-21
 Identities = 60/100 (60%), Positives = 72/100 (72%), Gaps = 1/100 (1%)
 Frame = -3

Query: 371  SIYVQVGAVEWDEELTPLGYHLARLPVDVLVGKMLLYGGVFGCLSPILSISTFL-VTSPF 195
            S+  +VGAVE DEELTPLG+HLA+LPVDVL+GKMLLYGG+FGCLSPILSI+ FL   +PF
Sbjct: 1097 SLLHEVGAVEGDEELTPLGHHLAKLPVDVLIGKMLLYGGIFGCLSPILSIAAFLSYKTPF 1156

Query: 194  VYPKDEVVQYVRAIRKGLIKFDEKPKEEPSAYLLRGDDSS 75
            VYPKDE  Q V  ++  L+      K E S+ L   D  S
Sbjct: 1157 VYPKDE-KQNVDRVKLALL----SDKLEKSSDLNNNDKQS 1191


>gb|EMJ26663.1| hypothetical protein PRUPE_ppa000230mg [Prunus persica]
          Length = 1426

 Score =  105 bits (261), Expect = 8e-21
 Identities = 52/69 (75%), Positives = 59/69 (85%), Gaps = 1/69 (1%)
 Frame = -3

Query: 359  QVGAVEWDEELTPLGYHLARLPVDVLVGKMLLYGGVFGCLSPILSISTFL-VTSPFVYPK 183
            +VGA+E DEELTPLG+HLA+LPVDVL+GKM+LYGG+FGCLSPILSIS FL   SPFVYPK
Sbjct: 1072 EVGALEADEELTPLGHHLAKLPVDVLIGKMMLYGGIFGCLSPILSISAFLSYKSPFVYPK 1131

Query: 182  DEVVQYVRA 156
            DE     RA
Sbjct: 1132 DERQNVERA 1140


>gb|ESW25901.1| hypothetical protein PHAVU_003G075000g [Phaseolus vulgaris]
          Length = 855

 Score =  104 bits (260), Expect = 1e-20
 Identities = 52/73 (71%), Positives = 60/73 (82%), Gaps = 1/73 (1%)
 Frame = -3

Query: 371 SIYVQVGAVEWDEELTPLGYHLARLPVDVLVGKMLLYGGVFGCLSPILSISTFL-VTSPF 195
           S+  +VGA+E DEELTPLG+HLA+LPVDVL+GKMLLYG +FGCLSPILSI+ FL   SPF
Sbjct: 497 SLLYEVGALEGDEELTPLGHHLAKLPVDVLIGKMLLYGAIFGCLSPILSIAAFLSYKSPF 556

Query: 194 VYPKDEVVQYVRA 156
           VYPKDE     RA
Sbjct: 557 VYPKDEKQNVERA 569


>ref|XP_006385023.1| hypothetical protein POPTR_0004s231601g, partial [Populus
           trichocarpa] gi|550341791|gb|ERP62820.1| hypothetical
           protein POPTR_0004s231601g, partial [Populus
           trichocarpa]
          Length = 1051

 Score =  104 bits (260), Expect = 1e-20
 Identities = 52/73 (71%), Positives = 60/73 (82%), Gaps = 1/73 (1%)
 Frame = -3

Query: 371 SIYVQVGAVEWDEELTPLGYHLARLPVDVLVGKMLLYGGVFGCLSPILSISTFL-VTSPF 195
           S+  +VGA+E DE+LTPLG+HLA+LPVDVL+GKMLLYG +FGCLSPILSIS FL   SPF
Sbjct: 693 SLLYEVGALEGDEQLTPLGHHLAKLPVDVLIGKMLLYGAIFGCLSPILSISAFLSYKSPF 752

Query: 194 VYPKDEVVQYVRA 156
           VYPKDE     RA
Sbjct: 753 VYPKDEKQNVERA 765


>ref|XP_004499379.1| PREDICTED: ATP-dependent RNA helicase DHX29-like isoform X2 [Cicer
            arietinum]
          Length = 1309

 Score =  104 bits (259), Expect = 1e-20
 Identities = 51/73 (69%), Positives = 60/73 (82%), Gaps = 1/73 (1%)
 Frame = -3

Query: 371  SIYVQVGAVEWDEELTPLGYHLARLPVDVLVGKMLLYGGVFGCLSPILSISTFL-VTSPF 195
            S+  +VGA+E DEELTPLG+HLA+LPVDVL+GKM+LYG +FGCLSPILS+S FL   SPF
Sbjct: 902  SLLYEVGALEGDEELTPLGHHLAKLPVDVLIGKMMLYGAIFGCLSPILSVSAFLSYKSPF 961

Query: 194  VYPKDEVVQYVRA 156
            VYPKDE     RA
Sbjct: 962  VYPKDERQNVERA 974


>ref|XP_004499378.1| PREDICTED: ATP-dependent RNA helicase DHX29-like isoform X1 [Cicer
            arietinum]
          Length = 1442

 Score =  104 bits (259), Expect = 1e-20
 Identities = 51/73 (69%), Positives = 60/73 (82%), Gaps = 1/73 (1%)
 Frame = -3

Query: 371  SIYVQVGAVEWDEELTPLGYHLARLPVDVLVGKMLLYGGVFGCLSPILSISTFL-VTSPF 195
            S+  +VGA+E DEELTPLG+HLA+LPVDVL+GKM+LYG +FGCLSPILS+S FL   SPF
Sbjct: 1084 SLLYEVGALEGDEELTPLGHHLAKLPVDVLIGKMMLYGAIFGCLSPILSVSAFLSYKSPF 1143

Query: 194  VYPKDEVVQYVRA 156
            VYPKDE     RA
Sbjct: 1144 VYPKDERQNVERA 1156


>ref|XP_006431710.1| hypothetical protein CICLE_v100000302mg, partial [Citrus
           clementina] gi|557533832|gb|ESR44950.1| hypothetical
           protein CICLE_v100000302mg, partial [Citrus clementina]
          Length = 332

 Score =  103 bits (258), Expect = 2e-20
 Identities = 50/68 (73%), Positives = 58/68 (85%), Gaps = 1/68 (1%)
 Frame = -3

Query: 356 VGAVEWDEELTPLGYHLARLPVDVLVGKMLLYGGVFGCLSPILSISTFL-VTSPFVYPKD 180
           VGA+E DEELTPLG+HLA+LPVDVL+GKM+L+GG+FGCLSPILSIS FL   SPF+YPKD
Sbjct: 1   VGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKD 60

Query: 179 EVVQYVRA 156
           E     RA
Sbjct: 61  EKQNVERA 68