BLASTX nr result
ID: Atropa21_contig00000150
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00000150
(953 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tu... 611 e-172
gb|AAT38699.2| RNA dependent RNA polymerase family protein [Sola... 611 e-172
ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 608 e-171
ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycoper... 607 e-171
emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum] 604 e-170
ref|XP_006366109.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 603 e-170
gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa... 603 e-170
emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida] 599 e-169
gb|ABI34311.1| RNA dependent RNA polymerase family protein [Sola... 599 e-169
gb|AAT38687.2| RNA-directed RNA polymerase, putative [Solanum de... 597 e-168
gb|AAT38754.2| RNA-directed RNA polymerase, putative [Solanum de... 572 e-161
gb|AAT39936.2| RNA-directed RNA polymerase-like, putative [Solan... 570 e-160
gb|ABO93006.1| putative RNA-dependent RNA-polymerase [Solanum tu... 548 e-154
gb|ABI34378.1| RNA-directed RNA polymerase, putative [Solanum tu... 544 e-152
emb|CBI26820.3| unnamed protein product [Vitis vinifera] 525 e-146
ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [V... 525 e-146
ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [... 516 e-144
ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 514 e-143
emb|CAN82339.1| hypothetical protein VITISV_039922 [Vitis vinifera] 507 e-141
gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum] 506 e-141
>gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
Length = 1115
Score = 611 bits (1575), Expect = e-172
Identities = 290/318 (91%), Positives = 306/318 (96%), Gaps = 1/318 (0%)
Frame = -1
Query: 953 VPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQDLIPPRQVQAMDYSPAPSM 774
VPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQD+IPPRQVQAM+Y PAPS+
Sbjct: 773 VPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQDMIPPRQVQAMEYPPAPSI 832
Query: 773 ESDHDVTIEEVEEYFTNYIVNDSLGIIANAHVAVADREPDMAMSDPCKELAQLFSIAVDF 594
+ DH+VTIEEVEEYFTNYIVNDSLGIIANAHV ADREPDMAMSDPCK+LA+LFSIAVDF
Sbjct: 833 QLDHNVTIEEVEEYFTNYIVNDSLGIIANAHVVFADREPDMAMSDPCKKLAELFSIAVDF 892
Query: 593 PKTGVPAEIPSRLRPKEYPDFMEKP-DKPTYHSERVIGKLFRKVKDKAPQSTSIATFTRD 417
PKTGVPAEIPS+LRPKEYPDFM+KP DK TY SERVIGKLFRKVKDKAPQ++SIA FTRD
Sbjct: 893 PKTGVPAEIPSQLRPKEYPDFMDKPPDKTTYISERVIGKLFRKVKDKAPQASSIAIFTRD 952
Query: 416 VARRSYDTDLEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKASKTF 237
VARRSYD DLEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKASKTF
Sbjct: 953 VARRSYDADLEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKASKTF 1012
Query: 236 DRRRDAEAIGVAVRSLRKEARTWFKRRSDIEDMLAKASAWYHVTYHPRYWGCYNEGLKRD 57
DRR+DAEAI VAVR+LRKEARTWFKRR+DI+DML KASAWYHVTYHP YWGCYN+GLKRD
Sbjct: 1013 DRRKDAEAISVAVRALRKEARTWFKRRNDIDDMLPKASAWYHVTYHPTYWGCYNQGLKRD 1072
Query: 56 HFISFPWCVYDQLIQIKK 3
HFISFPWCVYDQLIQIKK
Sbjct: 1073 HFISFPWCVYDQLIQIKK 1090
>gb|AAT38699.2| RNA dependent RNA polymerase family protein [Solanum demissum]
Length = 963
Score = 611 bits (1575), Expect = e-172
Identities = 290/318 (91%), Positives = 306/318 (96%), Gaps = 1/318 (0%)
Frame = -1
Query: 953 VPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQDLIPPRQVQAMDYSPAPSM 774
VPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQD+IPPRQVQAM+Y PAPS+
Sbjct: 621 VPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQDMIPPRQVQAMEYPPAPSI 680
Query: 773 ESDHDVTIEEVEEYFTNYIVNDSLGIIANAHVAVADREPDMAMSDPCKELAQLFSIAVDF 594
+ DH+VTIEEVEEYFTNYIVNDSLGIIANAHV ADREPDMAMSDPCK+LA+LFSIAVDF
Sbjct: 681 QLDHNVTIEEVEEYFTNYIVNDSLGIIANAHVVFADREPDMAMSDPCKKLAELFSIAVDF 740
Query: 593 PKTGVPAEIPSRLRPKEYPDFMEKP-DKPTYHSERVIGKLFRKVKDKAPQSTSIATFTRD 417
PKTGVPAEIPS+LRPKEYPDFM+KP DK TY SERVIGKLFRKVKDKAPQ++SIA FTRD
Sbjct: 741 PKTGVPAEIPSQLRPKEYPDFMDKPPDKTTYISERVIGKLFRKVKDKAPQASSIAIFTRD 800
Query: 416 VARRSYDTDLEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKASKTF 237
VARRSYD DLEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKASKTF
Sbjct: 801 VARRSYDADLEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKASKTF 860
Query: 236 DRRRDAEAIGVAVRSLRKEARTWFKRRSDIEDMLAKASAWYHVTYHPRYWGCYNEGLKRD 57
DRR+DAEAI VAVR+LRKEARTWFKRR+DI+DML KASAWYHVTYHP YWGCYN+GLKRD
Sbjct: 861 DRRKDAEAISVAVRALRKEARTWFKRRNDIDDMLPKASAWYHVTYHPTYWGCYNQGLKRD 920
Query: 56 HFISFPWCVYDQLIQIKK 3
HFISFPWCVYDQLIQIKK
Sbjct: 921 HFISFPWCVYDQLIQIKK 938
>ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Solanum tuberosum]
Length = 1115
Score = 608 bits (1567), Expect = e-171
Identities = 287/318 (90%), Positives = 304/318 (95%), Gaps = 1/318 (0%)
Frame = -1
Query: 953 VPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQDLIPPRQVQAMDYSPAPSM 774
VPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQD+IPPRQVQAM+Y PAPS+
Sbjct: 773 VPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQDMIPPRQVQAMEYPPAPSI 832
Query: 773 ESDHDVTIEEVEEYFTNYIVNDSLGIIANAHVAVADREPDMAMSDPCKELAQLFSIAVDF 594
+ DHDVTIEEVEEYFTNYIVNDSLGIIANAHV ADREPDMAMSDPCK+LA+LFSIAVDF
Sbjct: 833 QLDHDVTIEEVEEYFTNYIVNDSLGIIANAHVVFADREPDMAMSDPCKKLAELFSIAVDF 892
Query: 593 PKTGVPAEIPSRLRPKEYPDFMEKP-DKPTYHSERVIGKLFRKVKDKAPQSTSIATFTRD 417
PKTGVPAEIPS+LRPKEYPDFM+KP DK TY SERVIGKL+RKVKDKAPQ++S A FTRD
Sbjct: 893 PKTGVPAEIPSQLRPKEYPDFMDKPPDKTTYISERVIGKLYRKVKDKAPQASSTAIFTRD 952
Query: 416 VARRSYDTDLEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKASKTF 237
VARRSYD DLEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMK SKTF
Sbjct: 953 VARRSYDADLEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKTSKTF 1012
Query: 236 DRRRDAEAIGVAVRSLRKEARTWFKRRSDIEDMLAKASAWYHVTYHPRYWGCYNEGLKRD 57
DRR+DAEAI +AVR+LRKEARTWFKRR+DI+DML KASAWYHVTYHP YWGCYN+GLKRD
Sbjct: 1013 DRRKDAEAISIAVRALRKEARTWFKRRNDIDDMLPKASAWYHVTYHPTYWGCYNQGLKRD 1072
Query: 56 HFISFPWCVYDQLIQIKK 3
HFISFPWCVYDQLIQIKK
Sbjct: 1073 HFISFPWCVYDQLIQIKK 1090
>ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycopersicum]
gi|4038592|emb|CAA71421.1| RNA-directed RNA polymerase
[Solanum lycopersicum]
Length = 1114
Score = 607 bits (1565), Expect = e-171
Identities = 286/317 (90%), Positives = 303/317 (95%)
Frame = -1
Query: 953 VPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQDLIPPRQVQAMDYSPAPSM 774
V ALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQD+IPPRQVQ M+Y PAPS+
Sbjct: 773 VRALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQDMIPPRQVQPMEYPPAPSI 832
Query: 773 ESDHDVTIEEVEEYFTNYIVNDSLGIIANAHVAVADREPDMAMSDPCKELAQLFSIAVDF 594
+ DHDVTIEEVEEYFTNYIVNDSLGIIANAHV ADREPDMAMSDPCK+LA+LFSIAVDF
Sbjct: 833 QLDHDVTIEEVEEYFTNYIVNDSLGIIANAHVVFADREPDMAMSDPCKKLAELFSIAVDF 892
Query: 593 PKTGVPAEIPSRLRPKEYPDFMEKPDKPTYHSERVIGKLFRKVKDKAPQSTSIATFTRDV 414
PKTGVPAEIPS+LRPKEYPDFM+KPDK +Y SERVIGKLFRKVKDKAPQ++SIATFTRDV
Sbjct: 893 PKTGVPAEIPSQLRPKEYPDFMDKPDKTSYISERVIGKLFRKVKDKAPQASSIATFTRDV 952
Query: 413 ARRSYDTDLEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKASKTFD 234
ARRSYD D+EVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKASKTFD
Sbjct: 953 ARRSYDADMEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKASKTFD 1012
Query: 233 RRRDAEAIGVAVRSLRKEARTWFKRRSDIEDMLAKASAWYHVTYHPRYWGCYNEGLKRDH 54
RR+DAEAI VAVR+LRKEAR WFKRR+DI+DML KASAWYHVTYHP YWGCYN+GLKR H
Sbjct: 1013 RRKDAEAISVAVRALRKEARAWFKRRNDIDDMLPKASAWYHVTYHPTYWGCYNQGLKRAH 1072
Query: 53 FISFPWCVYDQLIQIKK 3
FISFPWCVYDQLIQIKK
Sbjct: 1073 FISFPWCVYDQLIQIKK 1089
>emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]
Length = 1116
Score = 604 bits (1557), Expect = e-170
Identities = 285/317 (89%), Positives = 303/317 (95%)
Frame = -1
Query: 953 VPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQDLIPPRQVQAMDYSPAPSM 774
VPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWD DLIPPRQVQ+MDY+PAP+
Sbjct: 775 VPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDPDLIPPRQVQSMDYTPAPTT 834
Query: 773 ESDHDVTIEEVEEYFTNYIVNDSLGIIANAHVAVADREPDMAMSDPCKELAQLFSIAVDF 594
+ DHDVTIEEVEEYFTNYI+NDSLGIIANAHV ADREPDMAMSDPCK+LAQLFSIAVDF
Sbjct: 835 QLDHDVTIEEVEEYFTNYIINDSLGIIANAHVVFADREPDMAMSDPCKQLAQLFSIAVDF 894
Query: 593 PKTGVPAEIPSRLRPKEYPDFMEKPDKPTYHSERVIGKLFRKVKDKAPQSTSIATFTRDV 414
PKTGVPAEIPS+LRPKEYPDFMEKPDKPTY SE+VIGKLF+KVK+K PQ++SIATFTRDV
Sbjct: 895 PKTGVPAEIPSQLRPKEYPDFMEKPDKPTYPSEKVIGKLFQKVKNKTPQASSIATFTRDV 954
Query: 413 ARRSYDTDLEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKASKTFD 234
AR+SYD+D+ VDGFEDYIDEAF YK+EYDNKLGNLMDYYGIKTEAEILSGGIMKASKTFD
Sbjct: 955 ARKSYDSDMIVDGFEDYIDEAFYYKSEYDNKLGNLMDYYGIKTEAEILSGGIMKASKTFD 1014
Query: 233 RRRDAEAIGVAVRSLRKEARTWFKRRSDIEDMLAKASAWYHVTYHPRYWGCYNEGLKRDH 54
RR+DAEAIGVAVR LRKEAR WFKRRSDI+DMLAKASAWYHVTYH YWG YNEGLKRDH
Sbjct: 1015 RRKDAEAIGVAVRCLRKEARAWFKRRSDIDDMLAKASAWYHVTYHHTYWGLYNEGLKRDH 1074
Query: 53 FISFPWCVYDQLIQIKK 3
FISFPWCVYDQLIQIKK
Sbjct: 1075 FISFPWCVYDQLIQIKK 1091
>ref|XP_006366109.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Solanum
tuberosum] gi|565401229|ref|XP_006366110.1| PREDICTED:
RNA-dependent RNA polymerase 1-like isoform X2 [Solanum
tuberosum]
Length = 1115
Score = 603 bits (1554), Expect = e-170
Identities = 285/318 (89%), Positives = 302/318 (94%), Gaps = 1/318 (0%)
Frame = -1
Query: 953 VPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQDLIPPRQVQAMDYSPAPSM 774
VPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQD+IPPRQVQAM+Y PAPS+
Sbjct: 773 VPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQDMIPPRQVQAMEYPPAPSI 832
Query: 773 ESDHDVTIEEVEEYFTNYIVNDSLGIIANAHVAVADREPDMAMSDPCKELAQLFSIAVDF 594
+ DHDVTIEEVEEYFTNYIVNDSLGIIANAHV ADREPDMAMSDPCK+LA+L SIAVDF
Sbjct: 833 QLDHDVTIEEVEEYFTNYIVNDSLGIIANAHVVFADREPDMAMSDPCKKLAELCSIAVDF 892
Query: 593 PKTGVPAEIPSRLRPKEYPDFMEKP-DKPTYHSERVIGKLFRKVKDKAPQSTSIATFTRD 417
PKTGVPAEIP +LRPKEYPDFM+KP DK TY SERVIGKL+RKVKDKAPQ++S A FTRD
Sbjct: 893 PKTGVPAEIPPQLRPKEYPDFMDKPPDKTTYISERVIGKLYRKVKDKAPQASSTAIFTRD 952
Query: 416 VARRSYDTDLEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKASKTF 237
VARRSYD DLEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMK SKTF
Sbjct: 953 VARRSYDADLEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKTSKTF 1012
Query: 236 DRRRDAEAIGVAVRSLRKEARTWFKRRSDIEDMLAKASAWYHVTYHPRYWGCYNEGLKRD 57
DRR+DAEAI +AVR+LRKEARTWFKRR+DI+DML KASAWYHVTYHP YWGCYN+GLKRD
Sbjct: 1013 DRRKDAEAISIAVRALRKEARTWFKRRNDIDDMLPKASAWYHVTYHPTYWGCYNQGLKRD 1072
Query: 56 HFISFPWCVYDQLIQIKK 3
HFISFPWCVYDQLIQIKK
Sbjct: 1073 HFISFPWCVYDQLIQIKK 1090
>gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa]
gi|209420668|gb|ACI46982.1| RNA-dependent RNA polymerase
[Nicotiana glutinosa]
Length = 1117
Score = 603 bits (1554), Expect = e-170
Identities = 284/317 (89%), Positives = 301/317 (94%)
Frame = -1
Query: 953 VPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQDLIPPRQVQAMDYSPAPSM 774
VPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWD DL+PPRQ Q MDY+PAPS
Sbjct: 776 VPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDPDLVPPRQFQPMDYTPAPST 835
Query: 773 ESDHDVTIEEVEEYFTNYIVNDSLGIIANAHVAVADREPDMAMSDPCKELAQLFSIAVDF 594
+ DHDVTIEEVEEYFTNYIVNDSLGIIANAHV ADREPDMAMSDPCK+LAQLFSIAVDF
Sbjct: 836 QLDHDVTIEEVEEYFTNYIVNDSLGIIANAHVVFADREPDMAMSDPCKQLAQLFSIAVDF 895
Query: 593 PKTGVPAEIPSRLRPKEYPDFMEKPDKPTYHSERVIGKLFRKVKDKAPQSTSIATFTRDV 414
PKTGVPAEIPS+LRPKEYPDFMEKPDKPTYHSE+VIGKLF+KVKDK PQ++SIA FT DV
Sbjct: 896 PKTGVPAEIPSQLRPKEYPDFMEKPDKPTYHSEKVIGKLFQKVKDKTPQASSIANFTMDV 955
Query: 413 ARRSYDTDLEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKASKTFD 234
AR+SYD D+ V+GFEDYIDEAF YK+EYDNKLGNLMDYYGIKTEAEILSGGIMKASKTFD
Sbjct: 956 ARKSYDGDMIVNGFEDYIDEAFYYKSEYDNKLGNLMDYYGIKTEAEILSGGIMKASKTFD 1015
Query: 233 RRRDAEAIGVAVRSLRKEARTWFKRRSDIEDMLAKASAWYHVTYHPRYWGCYNEGLKRDH 54
RR+DA+AIGVAVRSLRKEARTWFKRRSDI+DMLAKASAWYHVTYH YWG YNEGLKRDH
Sbjct: 1016 RRKDADAIGVAVRSLRKEARTWFKRRSDIDDMLAKASAWYHVTYHHTYWGFYNEGLKRDH 1075
Query: 53 FISFPWCVYDQLIQIKK 3
FISFPWC+YDQLIQIKK
Sbjct: 1076 FISFPWCIYDQLIQIKK 1092
>emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida]
Length = 775
Score = 599 bits (1545), Expect = e-169
Identities = 281/310 (90%), Positives = 295/310 (95%)
Frame = -1
Query: 953 VPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQDLIPPRQVQAMDYSPAPSM 774
VPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWD DLIPPRQVQ MDY+PAPS+
Sbjct: 466 VPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDPDLIPPRQVQPMDYTPAPSI 525
Query: 773 ESDHDVTIEEVEEYFTNYIVNDSLGIIANAHVAVADREPDMAMSDPCKELAQLFSIAVDF 594
+ DHDVTIEEVEEYFTNY+VND LG+IANAHV ADREP+MAMSDPC ELAQLFSIAVDF
Sbjct: 526 QLDHDVTIEEVEEYFTNYMVNDGLGVIANAHVVFADREPNMAMSDPCIELAQLFSIAVDF 585
Query: 593 PKTGVPAEIPSRLRPKEYPDFMEKPDKPTYHSERVIGKLFRKVKDKAPQSTSIATFTRDV 414
PKTGVPAEIPS+LRPKEYPDFMEKPDK TYHSE+VIGKLFR+VKDK Q++SI TFTRDV
Sbjct: 586 PKTGVPAEIPSQLRPKEYPDFMEKPDKTTYHSEKVIGKLFREVKDKTTQASSITTFTRDV 645
Query: 413 ARRSYDTDLEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKASKTFD 234
ARRSYDTDLEVDGFEDYIDEAFDYK+EYD KLGNLMDYYGIKTEAE LSGGIMKASKTFD
Sbjct: 646 ARRSYDTDLEVDGFEDYIDEAFDYKSEYDKKLGNLMDYYGIKTEAETLSGGIMKASKTFD 705
Query: 233 RRRDAEAIGVAVRSLRKEARTWFKRRSDIEDMLAKASAWYHVTYHPRYWGCYNEGLKRDH 54
RRRDAEAIGVAVRSLRKEARTWFKRRSDI+D+LAKASAWYHV YHP YWGCYNEGLKRDH
Sbjct: 706 RRRDAEAIGVAVRSLRKEARTWFKRRSDIDDLLAKASAWYHVAYHPTYWGCYNEGLKRDH 765
Query: 53 FISFPWCVYD 24
FISFPWCVYD
Sbjct: 766 FISFPWCVYD 775
>gb|ABI34311.1| RNA dependent RNA polymerase family protein [Solanum demissum]
Length = 963
Score = 599 bits (1544), Expect = e-169
Identities = 283/318 (88%), Positives = 301/318 (94%), Gaps = 1/318 (0%)
Frame = -1
Query: 953 VPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQDLIPPRQVQAMDYSPAPSM 774
VPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQD+IPPRQVQ M+Y PAPS+
Sbjct: 621 VPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQDMIPPRQVQPMEYPPAPSI 680
Query: 773 ESDHDVTIEEVEEYFTNYIVNDSLGIIANAHVAVADREPDMAMSDPCKELAQLFSIAVDF 594
+ DHDVTIEEVEEYFTNYIVNDSLGII+NAHV ADREPDMAMSDPCK+LA+L SIAVDF
Sbjct: 681 QLDHDVTIEEVEEYFTNYIVNDSLGIISNAHVVFADREPDMAMSDPCKKLAELCSIAVDF 740
Query: 593 PKTGVPAEIPSRLRPKEYPDFMEKP-DKPTYHSERVIGKLFRKVKDKAPQSTSIATFTRD 417
PKTGVPAEIPS+LRPKEYPDFM+KP DK TY SERVIGKLFRKVKDKAPQ++S A FTRD
Sbjct: 741 PKTGVPAEIPSQLRPKEYPDFMDKPPDKTTYISERVIGKLFRKVKDKAPQASSTAIFTRD 800
Query: 416 VARRSYDTDLEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKASKTF 237
VARRSYD DLEVDGFEDYIDEAFDYKTEYD+KLGNLMDYYGIKTEAEILSGGIMK SKTF
Sbjct: 801 VARRSYDADLEVDGFEDYIDEAFDYKTEYDSKLGNLMDYYGIKTEAEILSGGIMKTSKTF 860
Query: 236 DRRRDAEAIGVAVRSLRKEARTWFKRRSDIEDMLAKASAWYHVTYHPRYWGCYNEGLKRD 57
DRR+DAEAI +AVR+LRKEARTWFKR +DI+DML KASAWYHVTYHP YWGCYN+GLKRD
Sbjct: 861 DRRKDAEAISIAVRALRKEARTWFKRHNDIDDMLPKASAWYHVTYHPTYWGCYNQGLKRD 920
Query: 56 HFISFPWCVYDQLIQIKK 3
HFISFPWCVYDQLIQIKK
Sbjct: 921 HFISFPWCVYDQLIQIKK 938
>gb|AAT38687.2| RNA-directed RNA polymerase, putative [Solanum demissum]
Length = 1139
Score = 597 bits (1538), Expect = e-168
Identities = 288/350 (82%), Positives = 304/350 (86%), Gaps = 33/350 (9%)
Frame = -1
Query: 953 VPALHHMVDCVVFPQKGKR---------------------------------PHPNECSG 873
VPALHHMVDCVVFPQKGKR PHPNECSG
Sbjct: 765 VPALHHMVDCVVFPQKGKRLGMYFNCLPTSEVEVKSAYTLPSSDPTLCFDDRPHPNECSG 824
Query: 872 SDLDGDIYFVCWDQDLIPPRQVQAMDYSPAPSMESDHDVTIEEVEEYFTNYIVNDSLGII 693
SDLDGDIYFVCWDQD+IPPRQVQ M+Y PAPS++ DHDVTIEEVEEYFTNYIVNDSLGII
Sbjct: 825 SDLDGDIYFVCWDQDMIPPRQVQPMEYPPAPSIQLDHDVTIEEVEEYFTNYIVNDSLGII 884
Query: 692 ANAHVAVADREPDMAMSDPCKELAQLFSIAVDFPKTGVPAEIPSRLRPKEYPDFMEKPDK 513
ANAHV ADREPDMAMSDPCK+LA+LFSIAVDFPKTGVPAEIPS+LRPKEYPDFM+KPDK
Sbjct: 885 ANAHVVFADREPDMAMSDPCKKLAELFSIAVDFPKTGVPAEIPSQLRPKEYPDFMDKPDK 944
Query: 512 PTYHSERVIGKLFRKVKDKAPQSTSIATFTRDVARRSYDTDLEVDGFEDYIDEAFDYKTE 333
TY SERVIGKLFRKVKDKAPQ++SIA FTRDVARRSYD DLEVDGFEDYIDEAFDYKTE
Sbjct: 945 TTYISERVIGKLFRKVKDKAPQASSIAIFTRDVARRSYDVDLEVDGFEDYIDEAFDYKTE 1004
Query: 332 YDNKLGNLMDYYGIKTEAEILSGGIMKASKTFDRRRDAEAIGVAVRSLRKEARTWFKRRS 153
YDNKLGNLMDYYGIKTEAEILSGGIMK SKTFDRR+DAEAI +AVR+LRKEARTWFKRR+
Sbjct: 1005 YDNKLGNLMDYYGIKTEAEILSGGIMKTSKTFDRRKDAEAISIAVRALRKEARTWFKRRN 1064
Query: 152 DIEDMLAKASAWYHVTYHPRYWGCYNEGLKRDHFISFPWCVYDQLIQIKK 3
DI+DML KASAWYHVTYHP YWGCYN+GLKRDHFISFPWCVYDQLIQIKK
Sbjct: 1065 DIDDMLPKASAWYHVTYHPTYWGCYNQGLKRDHFISFPWCVYDQLIQIKK 1114
>gb|AAT38754.2| RNA-directed RNA polymerase, putative [Solanum demissum]
Length = 1021
Score = 572 bits (1474), Expect = e-161
Identities = 285/376 (75%), Positives = 302/376 (80%), Gaps = 59/376 (15%)
Frame = -1
Query: 953 VPALHHMVDCVVFPQKGKR---------------------------------PHPNECSG 873
VPALHHMVDCVVFPQKGKR PHPNECSG
Sbjct: 621 VPALHHMVDCVVFPQKGKRLGMYFNCFPTSEVEVKSAYTLPSSDPTLWYLTGPHPNECSG 680
Query: 872 SDLDGDIYFVCWDQDLIPPRQVQAMDYSPAPSMESDHDVTIE------------------ 747
SDLDGDIYFVCWDQD+IPPRQVQ M+Y PAPS++ DHDVTIE
Sbjct: 681 SDLDGDIYFVCWDQDMIPPRQVQPMEYPPAPSIQLDHDVTIERGDWPVCATTVQVLRNSF 740
Query: 746 -------EVEEYFTNYIVNDSLGIIANAHVAVADREPDMAMSDPCKELAQLFSIAVDFPK 588
EVEEYFTNYIVNDSLGII+NAHV ADREPDMAMSDPCK+LA+L SIAVDFPK
Sbjct: 741 SPVCLLQEVEEYFTNYIVNDSLGIISNAHVVFADREPDMAMSDPCKKLAELCSIAVDFPK 800
Query: 587 TGVPAEIPSRLRPKEYPDFMEKP-DKPTYHSERVIGKLFRKVKDKAPQSTSIATFTRDVA 411
TGVPAEIPS+LRPKEYPDFM+KP DK TY SERVIGKLFRKVKDKAPQ++S A FTRDVA
Sbjct: 801 TGVPAEIPSQLRPKEYPDFMDKPPDKTTYISERVIGKLFRKVKDKAPQASSTAIFTRDVA 860
Query: 410 RRSYDTDLEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKASKTFDR 231
RRSYD DLEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMK SKTFDR
Sbjct: 861 RRSYDADLEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKTSKTFDR 920
Query: 230 RRDAEAIGVAVRSLRKEARTWFKRRSDIEDMLAKASAWYHVTYHPRYWGCYNEGLKRDHF 51
R+DAEAI +AVR+LRKEARTWFKRR+DI+DML KASAWYHVTYHP YWGCYN+GLKRDHF
Sbjct: 921 RKDAEAISIAVRALRKEARTWFKRRNDIDDMLPKASAWYHVTYHPTYWGCYNQGLKRDHF 980
Query: 50 ISFPWCVYDQLIQIKK 3
ISFPWCVYDQLIQIKK
Sbjct: 981 ISFPWCVYDQLIQIKK 996
>gb|AAT39936.2| RNA-directed RNA polymerase-like, putative [Solanum demissum]
Length = 1137
Score = 570 bits (1468), Expect = e-160
Identities = 273/318 (85%), Positives = 289/318 (90%), Gaps = 1/318 (0%)
Frame = -1
Query: 953 VPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQDLIPPRQVQAMDYSPAPSM 774
VPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQD+IPPRQVQAM++ P PS+
Sbjct: 809 VPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQDMIPPRQVQAMEFPPPPSI 868
Query: 773 ESDHDVTIEEVEEYFTNYIVNDSLGIIANAHVAVADREPDMAMSDPCKELAQLFSIAVDF 594
+ DHDVTIEEVEEYFTNYIVND LGIIANAHV ADREPDMAM +DF
Sbjct: 869 QLDHDVTIEEVEEYFTNYIVNDGLGIIANAHVVFADREPDMAM--------------MDF 914
Query: 593 PKTGVPAEIPSRLRPKEYPDFMEKP-DKPTYHSERVIGKLFRKVKDKAPQSTSIATFTRD 417
PKTGVPAEIPS+LRPKEYPDFM+KP DK TY SERVIGKLFRKVKDKAPQ++SIA FTRD
Sbjct: 915 PKTGVPAEIPSQLRPKEYPDFMDKPPDKTTYISERVIGKLFRKVKDKAPQASSIAIFTRD 974
Query: 416 VARRSYDTDLEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKASKTF 237
ARRSYDTDLEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMK SKTF
Sbjct: 975 DARRSYDTDLEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKTSKTF 1034
Query: 236 DRRRDAEAIGVAVRSLRKEARTWFKRRSDIEDMLAKASAWYHVTYHPRYWGCYNEGLKRD 57
DRR+DAEAI +AVR+LRKEARTWFKRR+DI+DML KASAWYHVTYHP YWGCYN+GLKRD
Sbjct: 1035 DRRKDAEAISIAVRALRKEARTWFKRRNDIDDMLPKASAWYHVTYHPTYWGCYNQGLKRD 1094
Query: 56 HFISFPWCVYDQLIQIKK 3
HFISFPWCVYDQLIQIKK
Sbjct: 1095 HFISFPWCVYDQLIQIKK 1112
>gb|ABO93006.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
Length = 1065
Score = 548 bits (1413), Expect = e-154
Identities = 260/294 (88%), Positives = 277/294 (94%), Gaps = 1/294 (0%)
Frame = -1
Query: 953 VPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQDLIPPRQVQAMDYSPAPSM 774
VPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQD+IPPRQVQ M+Y PAPS+
Sbjct: 772 VPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQDMIPPRQVQPMEYPPAPSI 831
Query: 773 ESDHDVTIEEVEEYFTNYIVNDSLGIIANAHVAVADREPDMAMSDPCKELAQLFSIAVDF 594
+ DHDVTIEEVEEYFTNYIVNDSLGII+NAHV ADREPDMAMSDPCK+LA+L SIAVDF
Sbjct: 832 QLDHDVTIEEVEEYFTNYIVNDSLGIISNAHVVFADREPDMAMSDPCKKLAELCSIAVDF 891
Query: 593 PKTGVPAEIPSRLRPKEYPDFMEK-PDKPTYHSERVIGKLFRKVKDKAPQSTSIATFTRD 417
PKTGVPAEIPS+ RPKEYPDFM+K PDK TY SERVIGKL+RKVKDKAPQ++S A FTRD
Sbjct: 892 PKTGVPAEIPSQWRPKEYPDFMDKPPDKTTYISERVIGKLYRKVKDKAPQASSTAIFTRD 951
Query: 416 VARRSYDTDLEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKASKTF 237
VARRSYD DLEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMK SKTF
Sbjct: 952 VARRSYDADLEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKTSKTF 1011
Query: 236 DRRRDAEAIGVAVRSLRKEARTWFKRRSDIEDMLAKASAWYHVTYHPRYWGCYN 75
DRR+DAEAI +AVR+LRKEARTWFKRR+DI+DML KASAWYHVTYHP YWGCYN
Sbjct: 1012 DRRKDAEAISIAVRALRKEARTWFKRRNDIDDMLPKASAWYHVTYHPTYWGCYN 1065
>gb|ABI34378.1| RNA-directed RNA polymerase, putative [Solanum tuberosum]
Length = 1050
Score = 544 bits (1402), Expect = e-152
Identities = 264/324 (81%), Positives = 282/324 (87%), Gaps = 26/324 (8%)
Frame = -1
Query: 896 PHPNECSGSDLDGDIYFVCWDQDLIPPRQVQAMDYSPAPSMESDHDVTIE---------- 747
PHPNECSGSDLDGDIYFVCWD D+IPPRQVQ M+Y PAPS++ DHDVTIE
Sbjct: 702 PHPNECSGSDLDGDIYFVCWDPDMIPPRQVQPMEYPPAPSIQLDHDVTIERGDWPVCATT 761
Query: 746 ---------------EVEEYFTNYIVNDSLGIIANAHVAVADREPDMAMSDPCKELAQLF 612
EVEEYFTNYIVNDSLGII+NAHV ADREPDMAMSDPCK+LA+L
Sbjct: 762 VQVLRNSFSPVCLLQEVEEYFTNYIVNDSLGIISNAHVVFADREPDMAMSDPCKKLAELC 821
Query: 611 SIAVDFPKTGVPAEIPSRLRPKEYPDFMEKP-DKPTYHSERVIGKLFRKVKDKAPQSTSI 435
SIAVDFPKTGVPAEIPS+LRPKEYPDFM+KP DK TY SERVIGKLFRKVKDKAPQ++S
Sbjct: 822 SIAVDFPKTGVPAEIPSQLRPKEYPDFMDKPPDKTTYISERVIGKLFRKVKDKAPQASST 881
Query: 434 ATFTRDVARRSYDTDLEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIM 255
A FTRDVARRSYD DLEVDGFEDYIDEAFDYKTEYDNKLGNLM+YYGIKTEAEILSGGIM
Sbjct: 882 AIFTRDVARRSYDADLEVDGFEDYIDEAFDYKTEYDNKLGNLMEYYGIKTEAEILSGGIM 941
Query: 254 KASKTFDRRRDAEAIGVAVRSLRKEARTWFKRRSDIEDMLAKASAWYHVTYHPRYWGCYN 75
K SKTFDRR+DAEAI +AVR+LRKEARTWFKRR+DI+DML KASAWYHVTYHP YWGCYN
Sbjct: 942 KTSKTFDRRKDAEAISIAVRALRKEARTWFKRRNDIDDMLPKASAWYHVTYHPTYWGCYN 1001
Query: 74 EGLKRDHFISFPWCVYDQLIQIKK 3
+GLKRDHFISFPWCVYDQLIQIKK
Sbjct: 1002 QGLKRDHFISFPWCVYDQLIQIKK 1025
>emb|CBI26820.3| unnamed protein product [Vitis vinifera]
Length = 919
Score = 525 bits (1352), Expect = e-146
Identities = 246/322 (76%), Positives = 277/322 (86%), Gaps = 5/322 (1%)
Frame = -1
Query: 953 VPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQDLIPPRQVQAMDYSPAPSM 774
VP LHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWD+DLIPP+Q+ MDY+PAP+
Sbjct: 574 VPTLHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDRDLIPPQQINPMDYTPAPTK 633
Query: 773 ESDHDVTIEEVEEYFTNYIVNDSLGIIANAHVAVADREPDMAMSDPCKELAQLFSIAVDF 594
DHDV IEEVEEYFTNYIVNDSLGIIANAH AD+E D A DPC ELA+LFSIAVDF
Sbjct: 634 VLDHDVMIEEVEEYFTNYIVNDSLGIIANAHTVFADKEYDKAYCDPCTELAKLFSIAVDF 693
Query: 593 PKTGVPAEIPSRLRPKEYPDFMEKPDKPTYHSERVIGKLFRKVKDKAPQSTSIATFTRDV 414
PKTGVPAEIP LR KEYPDFMEK DKPTY S+ VIGKLFR+VKD AP + +I +FTRDV
Sbjct: 694 PKTGVPAEIPRNLRVKEYPDFMEKADKPTYESQSVIGKLFREVKDIAPHNCNIRSFTRDV 753
Query: 413 ARRSYDTDLEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKASKTFD 234
AR+SYD D+EV GFEDY+ +AF YK+EYD KLGNLMDYYGIKTE+EILSG IM+ SK+FD
Sbjct: 754 ARQSYDPDMEVVGFEDYVSDAFYYKSEYDYKLGNLMDYYGIKTESEILSGSIMRMSKSFD 813
Query: 233 RRRDAEAIGVAVRSLRKEARTWFKRR-----SDIEDMLAKASAWYHVTYHPRYWGCYNEG 69
RR+DAEAIG+AV+SLRKEARTWF + S+ +D+ AKASAWYHVTYHP YWGCYNEG
Sbjct: 814 RRKDAEAIGLAVKSLRKEARTWFNKMGSETDSEADDVYAKASAWYHVTYHPDYWGCYNEG 873
Query: 68 LKRDHFISFPWCVYDQLIQIKK 3
+ RDHF+SFPWCVYD+LI K+
Sbjct: 874 MDRDHFLSFPWCVYDKLIHTKR 895
>ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [Vitis vinifera]
Length = 1121
Score = 525 bits (1352), Expect = e-146
Identities = 246/322 (76%), Positives = 277/322 (86%), Gaps = 5/322 (1%)
Frame = -1
Query: 953 VPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQDLIPPRQVQAMDYSPAPSM 774
VP LHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWD+DLIPP+Q+ MDY+PAP+
Sbjct: 776 VPTLHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDRDLIPPQQINPMDYTPAPTK 835
Query: 773 ESDHDVTIEEVEEYFTNYIVNDSLGIIANAHVAVADREPDMAMSDPCKELAQLFSIAVDF 594
DHDV IEEVEEYFTNYIVNDSLGIIANAH AD+E D A DPC ELA+LFSIAVDF
Sbjct: 836 VLDHDVMIEEVEEYFTNYIVNDSLGIIANAHTVFADKEYDKAYCDPCTELAKLFSIAVDF 895
Query: 593 PKTGVPAEIPSRLRPKEYPDFMEKPDKPTYHSERVIGKLFRKVKDKAPQSTSIATFTRDV 414
PKTGVPAEIP LR KEYPDFMEK DKPTY S+ VIGKLFR+VKD AP + +I +FTRDV
Sbjct: 896 PKTGVPAEIPRNLRVKEYPDFMEKADKPTYESQSVIGKLFREVKDIAPHNCNIRSFTRDV 955
Query: 413 ARRSYDTDLEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKASKTFD 234
AR+SYD D+EV GFEDY+ +AF YK+EYD KLGNLMDYYGIKTE+EILSG IM+ SK+FD
Sbjct: 956 ARQSYDPDMEVVGFEDYVSDAFYYKSEYDYKLGNLMDYYGIKTESEILSGSIMRMSKSFD 1015
Query: 233 RRRDAEAIGVAVRSLRKEARTWFKRR-----SDIEDMLAKASAWYHVTYHPRYWGCYNEG 69
RR+DAEAIG+AV+SLRKEARTWF + S+ +D+ AKASAWYHVTYHP YWGCYNEG
Sbjct: 1016 RRKDAEAIGLAVKSLRKEARTWFNKMGSETDSEADDVYAKASAWYHVTYHPDYWGCYNEG 1075
Query: 68 LKRDHFISFPWCVYDQLIQIKK 3
+ RDHF+SFPWCVYD+LI K+
Sbjct: 1076 MDRDHFLSFPWCVYDKLIHTKR 1097
>ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [Populus trichocarpa]
gi|222851356|gb|EEE88903.1| RNA-directed RNA Polymerase
family protein [Populus trichocarpa]
Length = 1133
Score = 516 bits (1329), Expect = e-144
Identities = 241/322 (74%), Positives = 277/322 (86%), Gaps = 5/322 (1%)
Frame = -1
Query: 953 VPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQDLIPPRQVQAMDYSPAPSM 774
VPALHHMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWD +LIP +Q+ MDY+P P +
Sbjct: 786 VPALHHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPELIPSQQISPMDYTPEPPL 845
Query: 773 ESDHDVTIEEVEEYFTNYIVNDSLGIIANAHVAVADREPDMAMSDPCKELAQLFSIAVDF 594
+ DHDVTIEEVEEYFTNYIVNDSLG+IANAH A AD+E AMS+PC ELA+ FSIAVDF
Sbjct: 846 QLDHDVTIEEVEEYFTNYIVNDSLGVIANAHTAHADKESLKAMSEPCVELARKFSIAVDF 905
Query: 593 PKTGVPAEIPSRLRPKEYPDFMEKPDKPTYHSERVIGKLFRKVKDKAPQSTSIATFTRDV 414
PKTGVPAEIPS LR +EYPDFMEKPDKP+Y S VIGKLFR+VKD AP+++SI +FT DV
Sbjct: 906 PKTGVPAEIPSNLRAREYPDFMEKPDKPSYESRNVIGKLFREVKDIAPRTSSIRSFTSDV 965
Query: 413 ARRSYDTDLEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKASKTFD 234
AR+ YD D+EVDGFEDYID+AF YK+ YD KLGNLM+YYGIKTEAE+LSG MK SK+F
Sbjct: 966 ARQCYDPDMEVDGFEDYIDDAFYYKSNYDYKLGNLMEYYGIKTEAELLSGSFMKMSKSFT 1025
Query: 233 RRRDAEAIGVAVRSLRKEARTWFKRR-----SDIEDMLAKASAWYHVTYHPRYWGCYNEG 69
++RDAEAIG+AVRSL+KEAR+WF + S +D+ AKASAWYHVTYH YWGCYNEG
Sbjct: 1026 KKRDAEAIGMAVRSLKKEARSWFNEKGSGLDSQADDVDAKASAWYHVTYHHNYWGCYNEG 1085
Query: 68 LKRDHFISFPWCVYDQLIQIKK 3
+ RDHF+SFPWCVYD+LIQIK+
Sbjct: 1086 MNRDHFLSFPWCVYDKLIQIKR 1107
>ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
Length = 1132
Score = 514 bits (1323), Expect = e-143
Identities = 242/320 (75%), Positives = 271/320 (84%), Gaps = 3/320 (0%)
Frame = -1
Query: 953 VPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQDLIPPRQVQAMDYSPAPSM 774
VPALHHMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWD +LIPP+Q MDY+PA SM
Sbjct: 790 VPALHHMVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDDELIPPQQDPPMDYTPAQSM 849
Query: 773 ESDHDVTIEEVEEYFTNYIVNDSLGIIANAHVAVADREPDMAMSDPCKELAQLFSIAVDF 594
+ DHDV IE+VEEYFTNYIVNDSLGIIANAH ADREP A S+PC +LA+ FSIAVDF
Sbjct: 850 QLDHDVQIEDVEEYFTNYIVNDSLGIIANAHTVFADREPHKARSEPCLQLAEKFSIAVDF 909
Query: 593 PKTGVPAEIPSRLRPKEYPDFMEKPDKPTYHSERVIGKLFRKVKDKAPQSTSIATFTRDV 414
PKTGVPAEIP L KEYPDFMEKPDKPTY S+ VIGKLFR VKD AP ++ I FT++V
Sbjct: 910 PKTGVPAEIPPHLYVKEYPDFMEKPDKPTYESQNVIGKLFRAVKDIAPHTSCIRLFTKEV 969
Query: 413 ARRSYDTDLEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKASKTFD 234
ARRSYD D+EVDGFED+ID+A +K YD KLGNLMDYYGIKTEAEIL+G IMK SK+F
Sbjct: 970 ARRSYDPDMEVDGFEDHIDDAIYHKGNYDYKLGNLMDYYGIKTEAEILTGSIMKMSKSFT 1029
Query: 233 RRRDAEAIGVAVRSLRKEARTWFKRRSDI---EDMLAKASAWYHVTYHPRYWGCYNEGLK 63
+RRDAEAIG+AVR+LRKEAR WFK +S +D AKASAWYHVTYHP YWGCYN G+
Sbjct: 1030 KRRDAEAIGMAVRALRKEARAWFKEKSGSDTEDDAYAKASAWYHVTYHPDYWGCYNHGMN 1089
Query: 62 RDHFISFPWCVYDQLIQIKK 3
RDHF+SFPWCVYD+L++IKK
Sbjct: 1090 RDHFLSFPWCVYDRLVEIKK 1109
>emb|CAN82339.1| hypothetical protein VITISV_039922 [Vitis vinifera]
Length = 654
Score = 507 bits (1306), Expect = e-141
Identities = 240/322 (74%), Positives = 272/322 (84%), Gaps = 5/322 (1%)
Frame = -1
Query: 953 VPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQDLIPPRQVQAMDYSPAPSM 774
VP LHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWD+DLIPP+Q+ MDY+PAP+
Sbjct: 318 VPTLHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDRDLIPPQQINPMDYTPAPT- 376
Query: 773 ESDHDVTIEEVEEYFTNYIVNDSLGIIANAHVAVADREPDMAMSDPCKELAQLFSIAVDF 594
+EVEEYFTNYIVNDSLGIIANAH AD+E D A DPC ELA+LFSIAVDF
Sbjct: 377 --------KEVEEYFTNYIVNDSLGIIANAHTVFADKEYDKAYCDPCTELAKLFSIAVDF 428
Query: 593 PKTGVPAEIPSRLRPKEYPDFMEKPDKPTYHSERVIGKLFRKVKDKAPQSTSIATFTRDV 414
PKTGVPAEIP LR KEYPDFMEK DKPTY S+ VIGKLFR+VKD AP + +I +FTRDV
Sbjct: 429 PKTGVPAEIPRNLRVKEYPDFMEKADKPTYESQSVIGKLFREVKDIAPHNCNIRSFTRDV 488
Query: 413 ARRSYDTDLEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKASKTFD 234
AR+SYD D+EV GFEDY+ +AF YK+EYD KLGNLMDYYGIKTE+EILSG IM+ SK+FD
Sbjct: 489 ARQSYDPDMEVVGFEDYVSDAFYYKSEYDYKLGNLMDYYGIKTESEILSGSIMRMSKSFD 548
Query: 233 RRRDAEAIGVAVRSLRKEARTWFKRR-----SDIEDMLAKASAWYHVTYHPRYWGCYNEG 69
RR+DAEAIG+AV+SLRKEARTWF + S+ +D+ AKASAWYHVTYHP YWGCYNEG
Sbjct: 549 RRKDAEAIGLAVKSLRKEARTWFNKMGSETDSEADDVYAKASAWYHVTYHPDYWGCYNEG 608
Query: 68 LKRDHFISFPWCVYDQLIQIKK 3
+ RDHF+SFPWCVYD+LI K+
Sbjct: 609 MDRDHFLSFPWCVYDKLIHTKR 630
>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
Length = 1110
Score = 506 bits (1302), Expect = e-141
Identities = 237/322 (73%), Positives = 272/322 (84%), Gaps = 5/322 (1%)
Frame = -1
Query: 953 VPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQDLIPPRQVQAMDYSPAPSM 774
VP LHHMVDCVVFPQKG RPHPNECSGSDLDGD+YFVCWD +LIP +Q+ MDYSPA +
Sbjct: 764 VPDLHHMVDCVVFPQKGTRPHPNECSGSDLDGDVYFVCWDPELIPYKQIDPMDYSPASTT 823
Query: 773 ESDHDVTIEEVEEYFTNYIVNDSLGIIANAHVAVADREPDMAMSDPCKELAQLFSIAVDF 594
+ DH+VTIEE+EEYFTNYIVNDSLGII+NAH A ADREPD AMS PC ELA+LFSIAVDF
Sbjct: 824 KLDHEVTIEEIEEYFTNYIVNDSLGIISNAHTAFADREPDKAMSRPCLELAKLFSIAVDF 883
Query: 593 PKTGVPAEIPSRLRPKEYPDFMEKPDKPTYHSERVIGKLFRKVKDKAPQSTSIATFTRDV 414
PKTGVPAEIP LR KEYPDFMEKPDKP+Y S VIGKLFR+VK+ AP SI TR+
Sbjct: 884 PKTGVPAEIPQELRVKEYPDFMEKPDKPSYQSHNVIGKLFREVKNLAPNECSIKFLTREK 943
Query: 413 ARRSYDTDLEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKASKTFD 234
+R YD D+EV+GFEDYID+AF +K++YD KLGNLMDYYG+KTEAEIL GGIMK S++F
Sbjct: 944 MQRFYDPDMEVEGFEDYIDDAFFHKSKYDYKLGNLMDYYGVKTEAEILGGGIMKMSRSFT 1003
Query: 233 RRRDAEAIGVAVRSLRKEARTWFKRR-----SDIEDMLAKASAWYHVTYHPRYWGCYNEG 69
++RDAEAI +AVRSLRKEAR+WF + +I+D AKASAWY+VTYHP YWG YNEG
Sbjct: 1004 KKRDAEAISMAVRSLRKEARSWFNEKGSELDEEIDDAYAKASAWYYVTYHPSYWGQYNEG 1063
Query: 68 LKRDHFISFPWCVYDQLIQIKK 3
+ RDHF+SFPWCVYD+LIQIKK
Sbjct: 1064 MNRDHFLSFPWCVYDKLIQIKK 1085