BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00000089
         (1008 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG34873.1|AF261020_1 putative chloroplast RNA helicase VDL i...   499   e-139
ref|XP_006349223.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   494   e-137
gb|AAG34879.1|AF261024_1 putative chloroplast RNA helicase VDL' ...   489   e-136
gb|AAG38493.1|AF261032_1 putative chloroplast RNA helicase VDL' ...   489   e-136
ref|XP_004229420.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   488   e-135
gb|AAG34882.1|AF261027_1 putative chloroplast RNA helicase VDL' ...   404   e-110
gb|AAG38496.1|AF261032_4 putative chloroplast RNA helicase VDL' ...   404   e-110
gb|AAG34884.1|AF261029_1 putative chloroplast RNA helicase VDL' ...   373   e-101
gb|AAG38497.1|AF261032_5 putative chloroplast RNA helicase VDL' ...   371   e-100
gb|AAG34883.1|AF261028_1 putative chloroplast RNA helicase VDL' ...   371   e-100
gb|AAG38498.1|AF261032_6 putative chloroplast RNA helicase VDL' ...   369   e-100
ref|XP_002315792.2| hypothetical protein POPTR_0010s10230g [Popu...   366   7e-99
ref|XP_006419853.1| hypothetical protein CICLE_v10004897mg [Citr...   363   7e-98
ref|XP_006489326.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   360   6e-97
ref|XP_002277780.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   353   8e-95
ref|XP_002517195.1| dead box ATP-dependent RNA helicase, putativ...   351   2e-94
gb|EOY05584.1| P-loop containing nucleoside triphosphate hydrola...   348   2e-93
gb|EOY05583.1| P-loop containing nucleoside triphosphate hydrola...   348   2e-93
gb|EOY05582.1| P-loop containing nucleoside triphosphate hydrola...   348   2e-93
emb|CBI26203.3| unnamed protein product [Vitis vinifera]              347   3e-93

>gb|AAG34873.1|AF261020_1 putative chloroplast RNA helicase VDL isoform 1 [Nicotiana tabacum]
           gi|11385590|gb|AAG34876.1|AF261021_1 putative
           chloroplast RNA helicase VDL isoform 1 [Nicotiana
           tabacum]
          Length = 466

 Score =  499 bits (1284), Expect = e-139
 Identities = 250/288 (86%), Positives = 266/288 (92%)
 Frame = -2

Query: 866 MACFSAIQLHTLSWISSLNPTSQHFNPNSTYRTPKLFFYPKHLRASFTSSNEEANTDTKD 687
           MACFSA QLHTL W SSLN TS HF PN TYRTPK  F  K L ASF++S+ EA T+TKD
Sbjct: 1   MACFSATQLHTLLWTSSLNRTSHHFKPNYTYRTPKFLFRQKPLIASFSTSDVEARTETKD 60

Query: 686 SSTATLRELCHGHVPEHVIHRAEEMGYVIPTEVQLQALPFLFSGRDSVLHAQTGSGKTLA 507
           SSTATLRELCHGHVPEHVI R EE+GYVIPTEVQLQALPFL+SGRD VLHAQTGSGKTLA
Sbjct: 61  SSTATLRELCHGHVPEHVIRRVEEVGYVIPTEVQLQALPFLYSGRDCVLHAQTGSGKTLA 120

Query: 506 YLLQVLSVIDSQRSAVQALIVVPTRELGIQVTKVARMLASNPSERESGLKSCTVMALLDG 327
           YLLQ+LSVIDSQRSAVQALIVVPTRELG+QVTKVARMLA+ PSE ESG KSCTVMALLDG
Sbjct: 121 YLLQILSVIDSQRSAVQALIVVPTRELGMQVTKVARMLAAKPSELESGPKSCTVMALLDG 180

Query: 326 GMLKRHKSWLKAEPPTIVVATIGSLCQMIEKHILQLDSCQVLVVDEVDFMFNSSKEVSSL 147
           GML RHKSWLKAEPPTIVVAT+GSLCQM+EKHIL+LDSCQVLVVDEVDFMFNSSKE+SSL
Sbjct: 181 GMLNRHKSWLKAEPPTIVVATMGSLCQMLEKHILKLDSCQVLVVDEVDFMFNSSKEISSL 240

Query: 146 KRLLTSYSSSKNRQTIFASASIPQHRRFLYDCMQQKWTRADVVHVHVN 3
           KRLLTSYS+SKNRQTIFASASIPQHRRFLYDC+QQKWT+ADVVHVHVN
Sbjct: 241 KRLLTSYSTSKNRQTIFASASIPQHRRFLYDCVQQKWTKADVVHVHVN 288


>ref|XP_006349223.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
           chloroplastic-like [Solanum tuberosum]
          Length = 462

 Score =  494 bits (1273), Expect = e-137
 Identities = 254/288 (88%), Positives = 264/288 (91%)
 Frame = -2

Query: 866 MACFSAIQLHTLSWISSLNPTSQHFNPNSTYRTPKLFFYPKHLRASFTSSNEEANTDTKD 687
           MA FSA QL TLSW SS+NP       N TYRTPKL FYPK LR SF+SSN E  T TKD
Sbjct: 1   MAYFSATQLQTLSWTSSINP-------NVTYRTPKLLFYPKPLRVSFSSSNVETTTLTKD 53

Query: 686 SSTATLRELCHGHVPEHVIHRAEEMGYVIPTEVQLQALPFLFSGRDSVLHAQTGSGKTLA 507
           SST TLRELC+GHV EHVI RAEE+GYVIPTEVQLQALPFLFSGRD VLHAQTGSGKTLA
Sbjct: 54  SSTTTLRELCYGHVQEHVIRRAEEVGYVIPTEVQLQALPFLFSGRDCVLHAQTGSGKTLA 113

Query: 506 YLLQVLSVIDSQRSAVQALIVVPTRELGIQVTKVARMLASNPSERESGLKSCTVMALLDG 327
           YLLQVLSV+DSQRSAVQALIVVPTRELG+QVTKVARMLA+NPSE ESGLKSCTVMALLDG
Sbjct: 114 YLLQVLSVVDSQRSAVQALIVVPTRELGMQVTKVARMLAANPSEHESGLKSCTVMALLDG 173

Query: 326 GMLKRHKSWLKAEPPTIVVATIGSLCQMIEKHILQLDSCQVLVVDEVDFMFNSSKEVSSL 147
           GMLKRHKSWLKAEPPTIVVATIGSLCQM+EKHIL+LD+CQVLVVDEVDFMFNSSKEVSSL
Sbjct: 174 GMLKRHKSWLKAEPPTIVVATIGSLCQMLEKHILKLDTCQVLVVDEVDFMFNSSKEVSSL 233

Query: 146 KRLLTSYSSSKNRQTIFASASIPQHRRFLYDCMQQKWTRADVVHVHVN 3
           KRLLTSYSSSKNRQTIFASASIPQHRRFLYDCMQQKWTRADVVHVHVN
Sbjct: 234 KRLLTSYSSSKNRQTIFASASIPQHRRFLYDCMQQKWTRADVVHVHVN 281


>gb|AAG34879.1|AF261024_1 putative chloroplast RNA helicase VDL' isoform 1 [Nicotiana
           tabacum]
          Length = 466

 Score =  489 bits (1260), Expect = e-136
 Identities = 247/288 (85%), Positives = 263/288 (91%)
 Frame = -2

Query: 866 MACFSAIQLHTLSWISSLNPTSQHFNPNSTYRTPKLFFYPKHLRASFTSSNEEANTDTKD 687
           MACFSA QLHTL W SSLN TS HF PN TYRTPK  F  K L ASF++S+ EA T+TKD
Sbjct: 1   MACFSATQLHTLLWTSSLNRTSHHFKPNYTYRTPKFLFRQKPLIASFSTSDIEARTETKD 60

Query: 686 SSTATLRELCHGHVPEHVIHRAEEMGYVIPTEVQLQALPFLFSGRDSVLHAQTGSGKTLA 507
           SSTAT RELCHGHVPEHVI R EE+GYVIPTEVQL ALPFL+SGRD VLHAQTGSGKTLA
Sbjct: 61  SSTATPRELCHGHVPEHVIRRVEEVGYVIPTEVQLLALPFLYSGRDCVLHAQTGSGKTLA 120

Query: 506 YLLQVLSVIDSQRSAVQALIVVPTRELGIQVTKVARMLASNPSERESGLKSCTVMALLDG 327
           YLLQ+LSVIDSQRSAVQALIVVPTRELG+QVTKVAR LA+ PSE +SG KSCTVMALLDG
Sbjct: 121 YLLQMLSVIDSQRSAVQALIVVPTRELGMQVTKVARTLAAKPSELKSGPKSCTVMALLDG 180

Query: 326 GMLKRHKSWLKAEPPTIVVATIGSLCQMIEKHILQLDSCQVLVVDEVDFMFNSSKEVSSL 147
           GML RHKSWLKAEPPTIVVAT+GSLCQM+EKHIL+LDSCQVLVVDEVDFMFNSSKE+SSL
Sbjct: 181 GMLNRHKSWLKAEPPTIVVATMGSLCQMLEKHILKLDSCQVLVVDEVDFMFNSSKEISSL 240

Query: 146 KRLLTSYSSSKNRQTIFASASIPQHRRFLYDCMQQKWTRADVVHVHVN 3
           KRLLTSYSSSKNRQTIFASASIPQHRRFLYDC+QQKWT+ADVVHVHVN
Sbjct: 241 KRLLTSYSSSKNRQTIFASASIPQHRRFLYDCVQQKWTKADVVHVHVN 288


>gb|AAG38493.1|AF261032_1 putative chloroplast RNA helicase VDL' isoform 1 [Nicotiana
           tabacum]
          Length = 365

 Score =  489 bits (1260), Expect = e-136
 Identities = 247/288 (85%), Positives = 263/288 (91%)
 Frame = -2

Query: 866 MACFSAIQLHTLSWISSLNPTSQHFNPNSTYRTPKLFFYPKHLRASFTSSNEEANTDTKD 687
           MACFSA QLHTL W SSLN TS HF PN TYRTPK  F  K L ASF++S+ EA T+TKD
Sbjct: 1   MACFSATQLHTLLWTSSLNRTSHHFKPNYTYRTPKFLFRQKPLIASFSTSDIEARTETKD 60

Query: 686 SSTATLRELCHGHVPEHVIHRAEEMGYVIPTEVQLQALPFLFSGRDSVLHAQTGSGKTLA 507
           SSTAT RELCHGHVPEHVI R EE+GYVIPTEVQL ALPFL+SGRD VLHAQTGSGKTLA
Sbjct: 61  SSTATPRELCHGHVPEHVIRRVEEVGYVIPTEVQLLALPFLYSGRDCVLHAQTGSGKTLA 120

Query: 506 YLLQVLSVIDSQRSAVQALIVVPTRELGIQVTKVARMLASNPSERESGLKSCTVMALLDG 327
           YLLQ+LSVIDSQRSAVQALIVVPTRELG+QVTKVAR LA+ PSE +SG KSCTVMALLDG
Sbjct: 121 YLLQMLSVIDSQRSAVQALIVVPTRELGMQVTKVARTLAAKPSELKSGPKSCTVMALLDG 180

Query: 326 GMLKRHKSWLKAEPPTIVVATIGSLCQMIEKHILQLDSCQVLVVDEVDFMFNSSKEVSSL 147
           GML RHKSWLKAEPPTIVVAT+GSLCQM+EKHIL+LDSCQVLVVDEVDFMFNSSKE+SSL
Sbjct: 181 GMLNRHKSWLKAEPPTIVVATMGSLCQMLEKHILKLDSCQVLVVDEVDFMFNSSKEISSL 240

Query: 146 KRLLTSYSSSKNRQTIFASASIPQHRRFLYDCMQQKWTRADVVHVHVN 3
           KRLLTSYSSSKNRQTIFASASIPQHRRFLYDC+QQKWT+ADVVHVHVN
Sbjct: 241 KRLLTSYSSSKNRQTIFASASIPQHRRFLYDCVQQKWTKADVVHVHVN 288


>ref|XP_004229420.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
           chloroplastic-like [Solanum lycopersicum]
          Length = 459

 Score =  488 bits (1257), Expect = e-135
 Identities = 251/288 (87%), Positives = 263/288 (91%)
 Frame = -2

Query: 866 MACFSAIQLHTLSWISSLNPTSQHFNPNSTYRTPKLFFYPKHLRASFTSSNEEANTDTKD 687
           MA FSA QLHTLSW SS+NP       N  YRTPKL  YPK  RASF+SSN E  T TKD
Sbjct: 1   MAHFSATQLHTLSWTSSINP-------NVAYRTPKLLLYPKPSRASFSSSNVETTTLTKD 53

Query: 686 SSTATLRELCHGHVPEHVIHRAEEMGYVIPTEVQLQALPFLFSGRDSVLHAQTGSGKTLA 507
           SST TLRELC+GHV EHVI RAEE+GYV+PT+VQLQALPFLFSGRD VLHAQTGSGKTLA
Sbjct: 54  SSTTTLRELCYGHVQEHVILRAEEIGYVMPTKVQLQALPFLFSGRDCVLHAQTGSGKTLA 113

Query: 506 YLLQVLSVIDSQRSAVQALIVVPTRELGIQVTKVARMLASNPSERESGLKSCTVMALLDG 327
           YLLQVLSV+DSQRSAVQALIVVPTRELG+QVTKVARMLA+NPSE ESGLKSCTVMALLDG
Sbjct: 114 YLLQVLSVVDSQRSAVQALIVVPTRELGMQVTKVARMLAANPSEHESGLKSCTVMALLDG 173

Query: 326 GMLKRHKSWLKAEPPTIVVATIGSLCQMIEKHILQLDSCQVLVVDEVDFMFNSSKEVSSL 147
           GMLKRHKSWLKAEPPTIVVATIGSLCQM+EKHIL+LD+CQVLVVDEVDFMFNSSKEVSSL
Sbjct: 174 GMLKRHKSWLKAEPPTIVVATIGSLCQMLEKHILKLDTCQVLVVDEVDFMFNSSKEVSSL 233

Query: 146 KRLLTSYSSSKNRQTIFASASIPQHRRFLYDCMQQKWTRADVVHVHVN 3
           KRLLTSYSSSKNRQTIFASASIPQHRRFLYDCMQQKWTRADVVHVHVN
Sbjct: 234 KRLLTSYSSSKNRQTIFASASIPQHRRFLYDCMQQKWTRADVVHVHVN 281


>gb|AAG34882.1|AF261027_1 putative chloroplast RNA helicase VDL' isoform 4 [Nicotiana
           tabacum]
          Length = 425

 Score =  404 bits (1038), Expect = e-110
 Identities = 213/288 (73%), Positives = 227/288 (78%)
 Frame = -2

Query: 866 MACFSAIQLHTLSWISSLNPTSQHFNPNSTYRTPKLFFYPKHLRASFTSSNEEANTDTKD 687
           MACFSA QLHTL W SSLN TS HF PN TYRTPK  F  K L ASF++S+ EA T+TKD
Sbjct: 1   MACFSATQLHTLLWTSSLNRTSHHFKPNYTYRTPKFLFRQKPLIASFSTSDIEARTETKD 60

Query: 686 SSTATLRELCHGHVPEHVIHRAEEMGYVIPTEVQLQALPFLFSGRDSVLHAQTGSGKTLA 507
           SSTAT RELCHGHVPEHVI R EE+GYVIPTEVQL ALPFL+SGRD VLHAQTGSGKTLA
Sbjct: 61  SSTATPRELCHGHVPEHVIRRVEEVGYVIPTEVQLLALPFLYSGRDCVLHAQTGSGKTLA 120

Query: 506 YLLQVLSVIDSQRSAVQALIVVPTRELGIQVTKVARMLASNPSERESGLKSCTVMALLDG 327
           YLLQ+LSVIDSQRSAVQALIVVPTRELG+Q                              
Sbjct: 121 YLLQMLSVIDSQRSAVQALIVVPTRELGMQ------------------------------ 150

Query: 326 GMLKRHKSWLKAEPPTIVVATIGSLCQMIEKHILQLDSCQVLVVDEVDFMFNSSKEVSSL 147
                      AEPPTIVVAT+GSLCQM+EKHIL+LDSCQVLVVDEVDFMFNSSKE+SSL
Sbjct: 151 -----------AEPPTIVVATMGSLCQMLEKHILKLDSCQVLVVDEVDFMFNSSKEISSL 199

Query: 146 KRLLTSYSSSKNRQTIFASASIPQHRRFLYDCMQQKWTRADVVHVHVN 3
           KRLLTSYSSSKNRQTIFASASIPQHRRFLYDC+QQKWT+ADVVHVHVN
Sbjct: 200 KRLLTSYSSSKNRQTIFASASIPQHRRFLYDCVQQKWTKADVVHVHVN 247


>gb|AAG38496.1|AF261032_4 putative chloroplast RNA helicase VDL' isoform 4 [Nicotiana
           tabacum]
          Length = 324

 Score =  404 bits (1038), Expect = e-110
 Identities = 213/288 (73%), Positives = 227/288 (78%)
 Frame = -2

Query: 866 MACFSAIQLHTLSWISSLNPTSQHFNPNSTYRTPKLFFYPKHLRASFTSSNEEANTDTKD 687
           MACFSA QLHTL W SSLN TS HF PN TYRTPK  F  K L ASF++S+ EA T+TKD
Sbjct: 1   MACFSATQLHTLLWTSSLNRTSHHFKPNYTYRTPKFLFRQKPLIASFSTSDIEARTETKD 60

Query: 686 SSTATLRELCHGHVPEHVIHRAEEMGYVIPTEVQLQALPFLFSGRDSVLHAQTGSGKTLA 507
           SSTAT RELCHGHVPEHVI R EE+GYVIPTEVQL ALPFL+SGRD VLHAQTGSGKTLA
Sbjct: 61  SSTATPRELCHGHVPEHVIRRVEEVGYVIPTEVQLLALPFLYSGRDCVLHAQTGSGKTLA 120

Query: 506 YLLQVLSVIDSQRSAVQALIVVPTRELGIQVTKVARMLASNPSERESGLKSCTVMALLDG 327
           YLLQ+LSVIDSQRSAVQALIVVPTRELG+Q                              
Sbjct: 121 YLLQMLSVIDSQRSAVQALIVVPTRELGMQ------------------------------ 150

Query: 326 GMLKRHKSWLKAEPPTIVVATIGSLCQMIEKHILQLDSCQVLVVDEVDFMFNSSKEVSSL 147
                      AEPPTIVVAT+GSLCQM+EKHIL+LDSCQVLVVDEVDFMFNSSKE+SSL
Sbjct: 151 -----------AEPPTIVVATMGSLCQMLEKHILKLDSCQVLVVDEVDFMFNSSKEISSL 199

Query: 146 KRLLTSYSSSKNRQTIFASASIPQHRRFLYDCMQQKWTRADVVHVHVN 3
           KRLLTSYSSSKNRQTIFASASIPQHRRFLYDC+QQKWT+ADVVHVHVN
Sbjct: 200 KRLLTSYSSSKNRQTIFASASIPQHRRFLYDCVQQKWTKADVVHVHVN 247


>gb|AAG34884.1|AF261029_1 putative chloroplast RNA helicase VDL' isoform 6 [Nicotiana
           tabacum]
          Length = 294

 Score =  373 bits (958), Expect = e-101
 Identities = 190/228 (83%), Positives = 203/228 (89%)
 Frame = -2

Query: 866 MACFSAIQLHTLSWISSLNPTSQHFNPNSTYRTPKLFFYPKHLRASFTSSNEEANTDTKD 687
           MACFSA QLHTL W SSLN TS HF PN TYRTPK  F  K L ASF++S+ EA T+TKD
Sbjct: 1   MACFSATQLHTLLWTSSLNRTSHHFKPNYTYRTPKFLFRQKPLIASFSTSDIEARTETKD 60

Query: 686 SSTATLRELCHGHVPEHVIHRAEEMGYVIPTEVQLQALPFLFSGRDSVLHAQTGSGKTLA 507
           SSTAT RELCHGHVPEHVI R EE+GYVIPTEVQL ALPFL+SGRD VLHAQTGSGKTLA
Sbjct: 61  SSTATPRELCHGHVPEHVIRRVEEVGYVIPTEVQLLALPFLYSGRDCVLHAQTGSGKTLA 120

Query: 506 YLLQVLSVIDSQRSAVQALIVVPTRELGIQVTKVARMLASNPSERESGLKSCTVMALLDG 327
           YLLQ+LSVIDSQRSAVQALIVVPTRELG+QVTKVAR LA+ PSE +SG KSCTVMALLDG
Sbjct: 121 YLLQMLSVIDSQRSAVQALIVVPTRELGMQVTKVARTLAAKPSELKSGPKSCTVMALLDG 180

Query: 326 GMLKRHKSWLKAEPPTIVVATIGSLCQMIEKHILQLDSCQVLVVDEVD 183
           GML RHKSWLKAEPPTIVVAT+GSLCQM+EKHIL+LDSCQVLVVDEVD
Sbjct: 181 GMLNRHKSWLKAEPPTIVVATMGSLCQMLEKHILKLDSCQVLVVDEVD 228


>gb|AAG38497.1|AF261032_5 putative chloroplast RNA helicase VDL' isoform 5 [Nicotiana
           tabacum]
          Length = 289

 Score =  371 bits (952), Expect = e-100
 Identities = 189/227 (83%), Positives = 202/227 (88%)
 Frame = -2

Query: 866 MACFSAIQLHTLSWISSLNPTSQHFNPNSTYRTPKLFFYPKHLRASFTSSNEEANTDTKD 687
           MACFSA QLHTL W SSLN TS HF PN TYRTPK  F  K L ASF++S+ EA T+TKD
Sbjct: 1   MACFSATQLHTLLWTSSLNRTSHHFKPNYTYRTPKFLFRQKPLIASFSTSDIEARTETKD 60

Query: 686 SSTATLRELCHGHVPEHVIHRAEEMGYVIPTEVQLQALPFLFSGRDSVLHAQTGSGKTLA 507
           SSTAT RELCHGHVPEHVI R EE+GYVIPTEVQL ALPFL+SGRD VLHAQTGSGKTLA
Sbjct: 61  SSTATPRELCHGHVPEHVIRRVEEVGYVIPTEVQLLALPFLYSGRDCVLHAQTGSGKTLA 120

Query: 506 YLLQVLSVIDSQRSAVQALIVVPTRELGIQVTKVARMLASNPSERESGLKSCTVMALLDG 327
           YLLQ+LSVIDSQRSAVQALIVVPTRELG+QVTKVAR LA+ PSE +SG KSCTVMALLDG
Sbjct: 121 YLLQMLSVIDSQRSAVQALIVVPTRELGMQVTKVARTLAAKPSELKSGPKSCTVMALLDG 180

Query: 326 GMLKRHKSWLKAEPPTIVVATIGSLCQMIEKHILQLDSCQVLVVDEV 186
           GML RHKSWLKAEPPTIVVAT+GSLCQM+EKHIL+LDSCQVLVVDEV
Sbjct: 181 GMLNRHKSWLKAEPPTIVVATMGSLCQMLEKHILKLDSCQVLVVDEV 227


>gb|AAG34883.1|AF261028_1 putative chloroplast RNA helicase VDL' isoform 5 [Nicotiana
           tabacum]
          Length = 390

 Score =  371 bits (952), Expect = e-100
 Identities = 189/227 (83%), Positives = 202/227 (88%)
 Frame = -2

Query: 866 MACFSAIQLHTLSWISSLNPTSQHFNPNSTYRTPKLFFYPKHLRASFTSSNEEANTDTKD 687
           MACFSA QLHTL W SSLN TS HF PN TYRTPK  F  K L ASF++S+ EA T+TKD
Sbjct: 1   MACFSATQLHTLLWTSSLNRTSHHFKPNYTYRTPKFLFRQKPLIASFSTSDIEARTETKD 60

Query: 686 SSTATLRELCHGHVPEHVIHRAEEMGYVIPTEVQLQALPFLFSGRDSVLHAQTGSGKTLA 507
           SSTAT RELCHGHVPEHVI R EE+GYVIPTEVQL ALPFL+SGRD VLHAQTGSGKTLA
Sbjct: 61  SSTATPRELCHGHVPEHVIRRVEEVGYVIPTEVQLLALPFLYSGRDCVLHAQTGSGKTLA 120

Query: 506 YLLQVLSVIDSQRSAVQALIVVPTRELGIQVTKVARMLASNPSERESGLKSCTVMALLDG 327
           YLLQ+LSVIDSQRSAVQALIVVPTRELG+QVTKVAR LA+ PSE +SG KSCTVMALLDG
Sbjct: 121 YLLQMLSVIDSQRSAVQALIVVPTRELGMQVTKVARTLAAKPSELKSGPKSCTVMALLDG 180

Query: 326 GMLKRHKSWLKAEPPTIVVATIGSLCQMIEKHILQLDSCQVLVVDEV 186
           GML RHKSWLKAEPPTIVVAT+GSLCQM+EKHIL+LDSCQVLVVDEV
Sbjct: 181 GMLNRHKSWLKAEPPTIVVATMGSLCQMLEKHILKLDSCQVLVVDEV 227


>gb|AAG38498.1|AF261032_6 putative chloroplast RNA helicase VDL' isoform 6 [Nicotiana
           tabacum]
          Length = 226

 Score =  369 bits (948), Expect = e-100
 Identities = 188/226 (83%), Positives = 201/226 (88%)
 Frame = -2

Query: 866 MACFSAIQLHTLSWISSLNPTSQHFNPNSTYRTPKLFFYPKHLRASFTSSNEEANTDTKD 687
           MACFSA QLHTL W SSLN TS HF PN TYRTPK  F  K L ASF++S+ EA T+TKD
Sbjct: 1   MACFSATQLHTLLWTSSLNRTSHHFKPNYTYRTPKFLFRQKPLIASFSTSDIEARTETKD 60

Query: 686 SSTATLRELCHGHVPEHVIHRAEEMGYVIPTEVQLQALPFLFSGRDSVLHAQTGSGKTLA 507
           SSTAT RELCHGHVPEHVI R EE+GYVIPTEVQL ALPFL+SGRD VLHAQTGSGKTLA
Sbjct: 61  SSTATPRELCHGHVPEHVIRRVEEVGYVIPTEVQLLALPFLYSGRDCVLHAQTGSGKTLA 120

Query: 506 YLLQVLSVIDSQRSAVQALIVVPTRELGIQVTKVARMLASNPSERESGLKSCTVMALLDG 327
           YLLQ+LSVIDSQRSAVQALIVVPTRELG+QVTKVAR LA+ PSE +SG KSCTVMALLDG
Sbjct: 121 YLLQMLSVIDSQRSAVQALIVVPTRELGMQVTKVARTLAAKPSELKSGPKSCTVMALLDG 180

Query: 326 GMLKRHKSWLKAEPPTIVVATIGSLCQMIEKHILQLDSCQVLVVDE 189
           GML RHKSWLKAEPPTIVVAT+GSLCQM+EKHIL+LDSCQVLVVDE
Sbjct: 181 GMLNRHKSWLKAEPPTIVVATMGSLCQMLEKHILKLDSCQVLVVDE 226


>ref|XP_002315792.2| hypothetical protein POPTR_0010s10230g [Populus trichocarpa]
           gi|550329495|gb|EEF01963.2| hypothetical protein
           POPTR_0010s10230g [Populus trichocarpa]
          Length = 477

 Score =  366 bits (940), Expect = 7e-99
 Identities = 180/233 (77%), Positives = 208/233 (89%), Gaps = 1/233 (0%)
 Frame = -2

Query: 698 DTKDSSTA-TLRELCHGHVPEHVIHRAEEMGYVIPTEVQLQALPFLFSGRDSVLHAQTGS 522
           D K+   A TLRE+C G VPEH++ R EE+GY +PT+VQ QALP LFSGRD +LHAQTGS
Sbjct: 67  DAKEKGEALTLREICLGRVPEHLLRRVEEVGYAVPTDVQKQALPVLFSGRDCILHAQTGS 126

Query: 521 GKTLAYLLQVLSVIDSQRSAVQALIVVPTRELGIQVTKVARMLASNPSERESGLKSCTVM 342
           GKTLAYLL + SVI++QRSAVQALIVVPTRELGIQVTKVARMLA+ P+E ++  KSCTVM
Sbjct: 127 GKTLAYLLLIFSVINTQRSAVQALIVVPTRELGIQVTKVARMLAATPTENDAEQKSCTVM 186

Query: 341 ALLDGGMLKRHKSWLKAEPPTIVVATIGSLCQMIEKHILQLDSCQVLVVDEVDFMFNSSK 162
           ALLDGGML+RHKSWLKAEPPTIVVATI SLCQM+EKH+L+L+S QVLV+DEVDFMFNSSK
Sbjct: 187 ALLDGGMLRRHKSWLKAEPPTIVVATIASLCQMLEKHLLKLESMQVLVIDEVDFMFNSSK 246

Query: 161 EVSSLKRLLTSYSSSKNRQTIFASASIPQHRRFLYDCMQQKWTRADVVHVHVN 3
           +VSSL++LLTSYSS  +RQT+FASASIPQH RFLYDC+QQKWT+ DVVHVHVN
Sbjct: 247 QVSSLRKLLTSYSSCNSRQTVFASASIPQHNRFLYDCIQQKWTKRDVVHVHVN 299


>ref|XP_006419853.1| hypothetical protein CICLE_v10004897mg [Citrus clementina]
           gi|557521726|gb|ESR33093.1| hypothetical protein
           CICLE_v10004897mg [Citrus clementina]
          Length = 473

 Score =  363 bits (931), Expect = 7e-98
 Identities = 188/282 (66%), Positives = 227/282 (80%), Gaps = 3/282 (1%)
 Frame = -2

Query: 839 HTLSWISSLNPTSQHFNPNSTYRTPKLFFYPKHLRASFTSS---NEEANTDTKDSSTATL 669
           H LS  +S+  T++ F P S    P        LRA  +SS    EE    T ++S  TL
Sbjct: 19  HKLSSPNSIELTNRAFLPVSISWKP--------LRAVLSSSAVSTEELAAGTGNNSL-TL 69

Query: 668 RELCHGHVPEHVIHRAEEMGYVIPTEVQLQALPFLFSGRDSVLHAQTGSGKTLAYLLQVL 489
           RELC GHVPEHV+ R +E GYV+PT++Q +ALP LFS RD +LHAQTGSGKTL YLL + 
Sbjct: 70  RELCQGHVPEHVLRRMDETGYVLPTDIQREALPVLFSSRDCILHAQTGSGKTLTYLLLIF 129

Query: 488 SVIDSQRSAVQALIVVPTRELGIQVTKVARMLASNPSERESGLKSCTVMALLDGGMLKRH 309
           S++++QRSAVQA+IVVPTRELG+QVTKVAR+LA+ PS+ +   K CTVMALLDGGML+RH
Sbjct: 130 SLVNAQRSAVQAVIVVPTRELGMQVTKVARVLAAKPSDTDLEHKPCTVMALLDGGMLRRH 189

Query: 308 KSWLKAEPPTIVVATIGSLCQMIEKHILQLDSCQVLVVDEVDFMFNSSKEVSSLKRLLTS 129
           KSWLKAEPPTIVVAT+GSLCQ+IEKHI +L+S QVLV+DEVDF+FNSSK+VSSLK+LL S
Sbjct: 190 KSWLKAEPPTIVVATMGSLCQLIEKHIFKLESVQVLVIDEVDFLFNSSKQVSSLKKLLAS 249

Query: 128 YSSSKNRQTIFASASIPQHRRFLYDCMQQKWTRADVVHVHVN 3
           YSS  NRQT+FASASIPQHRRFL+DC+QQKWT++DVVHVHVN
Sbjct: 250 YSSCNNRQTVFASASIPQHRRFLHDCIQQKWTKSDVVHVHVN 291


>ref|XP_006489326.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
           chloroplastic-like isoform X1 [Citrus sinensis]
          Length = 473

 Score =  360 bits (923), Expect = 6e-97
 Identities = 187/282 (66%), Positives = 227/282 (80%), Gaps = 3/282 (1%)
 Frame = -2

Query: 839 HTLSWISSLNPTSQHFNPNSTYRTPKLFFYPKHLRASFTSSN---EEANTDTKDSSTATL 669
           H LS  +S+  T++ F P S    P        LRA  +SS    EE    T ++S  TL
Sbjct: 19  HKLSSPNSIEFTNRAFLPVSISWKP--------LRAVLSSSAVSIEELAAGTGNNSL-TL 69

Query: 668 RELCHGHVPEHVIHRAEEMGYVIPTEVQLQALPFLFSGRDSVLHAQTGSGKTLAYLLQVL 489
           RELC GHVPEHV+ R +E GYV+PT++Q +ALP LFS RD +LHAQTGSGKTL YLL + 
Sbjct: 70  RELCQGHVPEHVLRRMDETGYVLPTDIQREALPVLFSSRDCILHAQTGSGKTLTYLLLIF 129

Query: 488 SVIDSQRSAVQALIVVPTRELGIQVTKVARMLASNPSERESGLKSCTVMALLDGGMLKRH 309
           S++++QRSAVQA+IVVPTRELG+QVTKVAR+LA+ PS+ +   K CTVMALLDGGML+RH
Sbjct: 130 SLVNAQRSAVQAVIVVPTRELGMQVTKVARVLAAKPSDTDLEHKPCTVMALLDGGMLRRH 189

Query: 308 KSWLKAEPPTIVVATIGSLCQMIEKHILQLDSCQVLVVDEVDFMFNSSKEVSSLKRLLTS 129
           KSWLKAEPPTIVVAT+GSLCQ+IEKHI +L+S QVLV+DEVDF+FNSSK+VSSLK+LL S
Sbjct: 190 KSWLKAEPPTIVVATMGSLCQLIEKHIFKLESVQVLVIDEVDFLFNSSKQVSSLKKLLAS 249

Query: 128 YSSSKNRQTIFASASIPQHRRFLYDCMQQKWTRADVVHVHVN 3
           YSS  NRQT+FASASIPQHRRFL++C+QQKWT++DVVHVHVN
Sbjct: 250 YSSCNNRQTVFASASIPQHRRFLHNCIQQKWTKSDVVHVHVN 291


>ref|XP_002277780.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
           chloroplastic-like [Vitis vinifera]
          Length = 482

 Score =  353 bits (905), Expect = 8e-95
 Identities = 174/240 (72%), Positives = 206/240 (85%), Gaps = 2/240 (0%)
 Frame = -2

Query: 716 NEEANTDTKD--SSTATLRELCHGHVPEHVIHRAEEMGYVIPTEVQLQALPFLFSGRDSV 543
           N  + T+  D    T TLRE+C G VPEHV+ R EE+G+++PT+VQ QALP L SGRD +
Sbjct: 61  NSSSITEASDIGERTLTLREICQGCVPEHVLRRIEEVGFIVPTDVQQQALPVLLSGRDCI 120

Query: 542 LHAQTGSGKTLAYLLQVLSVIDSQRSAVQALIVVPTRELGIQVTKVARMLASNPSERESG 363
           LHAQTGSGKTL YLL + SV++++ SAVQALIVVPTRELGIQVTKVARMLA+ P E E  
Sbjct: 121 LHAQTGSGKTLTYLLLIFSVVNTKISAVQALIVVPTRELGIQVTKVARMLAAKPMEPELE 180

Query: 362 LKSCTVMALLDGGMLKRHKSWLKAEPPTIVVATIGSLCQMIEKHILQLDSCQVLVVDEVD 183
            KSCTVMALLDGGMLKRHKSWLKAEPPTIVVAT+ SLCQM+EK I +L+S +VLV+DEVD
Sbjct: 181 QKSCTVMALLDGGMLKRHKSWLKAEPPTIVVATVRSLCQMLEKQIFKLESMRVLVIDEVD 240

Query: 182 FMFNSSKEVSSLKRLLTSYSSSKNRQTIFASASIPQHRRFLYDCMQQKWTRADVVHVHVN 3
           FMFN+SK+V SL++LLTSYSS+ NRQT+FASASIPQHRRFL+DC+QQKWT++DVVHVHVN
Sbjct: 241 FMFNASKQVGSLRKLLTSYSSTNNRQTVFASASIPQHRRFLHDCIQQKWTKSDVVHVHVN 300


>ref|XP_002517195.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223543830|gb|EEF45358.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 476

 Score =  351 bits (901), Expect = 2e-94
 Identities = 179/255 (70%), Positives = 208/255 (81%), Gaps = 8/255 (3%)
 Frame = -2

Query: 743 HLRASFTSSN--------EEANTDTKDSSTATLRELCHGHVPEHVIHRAEEMGYVIPTEV 588
           HL+A   SS         EE   D K +   TLRELC  +VPE V+HR EE+GYV+PT+V
Sbjct: 51  HLQAVLNSSTSLITKEEEEEEQFDPKSNHFLTLRELCQNYVPEPVLHRMEEIGYVMPTDV 110

Query: 587 QLQALPFLFSGRDSVLHAQTGSGKTLAYLLQVLSVIDSQRSAVQALIVVPTRELGIQVTK 408
           Q QALP LFSG+D +LH QTGSGKTLAYLL + SVI++QRSAVQALI+VPTRELG+QVTK
Sbjct: 111 QRQALPVLFSGQDCILHGQTGSGKTLAYLLLIYSVINAQRSAVQALIIVPTRELGMQVTK 170

Query: 407 VARMLASNPSERESGLKSCTVMALLDGGMLKRHKSWLKAEPPTIVVATIGSLCQMIEKHI 228
           VARMLA+ P +        TVMALLDGGML+RHKSWLKAEPP IVVATI SLCQM+EKHI
Sbjct: 171 VARMLAAKPMD-------VTVMALLDGGMLRRHKSWLKAEPPKIVVATIASLCQMLEKHI 223

Query: 227 LQLDSCQVLVVDEVDFMFNSSKEVSSLKRLLTSYSSSKNRQTIFASASIPQHRRFLYDCM 48
            +LDS QVLV+DEVDFMFNSSK+VSSL++LLTSYSS  +RQT+FASASIPQHRRFLYDC+
Sbjct: 224 FKLDSMQVLVIDEVDFMFNSSKQVSSLRKLLTSYSSCNSRQTVFASASIPQHRRFLYDCI 283

Query: 47  QQKWTRADVVHVHVN 3
           QQKWT++D VHVH+N
Sbjct: 284 QQKWTKSDAVHVHIN 298


>gb|EOY05584.1| P-loop containing nucleoside triphosphate hydrolases superfamily
           protein isoform 3 [Theobroma cacao]
          Length = 351

 Score =  348 bits (893), Expect = 2e-93
 Identities = 178/272 (65%), Positives = 220/272 (80%), Gaps = 1/272 (0%)
 Frame = -2

Query: 815 LNPTSQHFNPNSTYRTPKLFFYPKHLRASFTSSNEEANTDTKDS-STATLRELCHGHVPE 639
           L P +++ N +S+       F  K L +S+ S++     + + + ++ TLRE+C  HVP+
Sbjct: 29  LQPRNRYLNLSSSAN-----FSAKALFSSYNSNSVPLTKELETNCNSLTLREICQDHVPD 83

Query: 638 HVIHRAEEMGYVIPTEVQLQALPFLFSGRDSVLHAQTGSGKTLAYLLQVLSVIDSQRSAV 459
           HV+ R EE+GYV+PT+VQ +ALP LFSG D +LHAQTGSGKTL YLL + SVI+ +RSAV
Sbjct: 84  HVLGRMEELGYVMPTDVQREALPVLFSGNDCILHAQTGSGKTLTYLLLIYSVINPKRSAV 143

Query: 458 QALIVVPTRELGIQVTKVARMLASNPSERESGLKSCTVMALLDGGMLKRHKSWLKAEPPT 279
           QALIVVPTRELG+QVTKVARMLA+ P + E   KS TVMALLDGGML+RHKSWLKAEPP 
Sbjct: 144 QALIVVPTRELGMQVTKVARMLAAKPMDPEVEQKSYTVMALLDGGMLRRHKSWLKAEPPN 203

Query: 278 IVVATIGSLCQMIEKHILQLDSCQVLVVDEVDFMFNSSKEVSSLKRLLTSYSSSKNRQTI 99
           IVVATIGSL QM+EK I +LDS ++LVVDEVDF+FNSSK+VSS+++LLTSYSS  NRQT+
Sbjct: 204 IVVATIGSLSQMLEKQIFKLDSMRILVVDEVDFIFNSSKQVSSIRKLLTSYSSCNNRQTV 263

Query: 98  FASASIPQHRRFLYDCMQQKWTRADVVHVHVN 3
           FASASIPQHRRFL+DC+QQKWT+ DVVHVHVN
Sbjct: 264 FASASIPQHRRFLHDCIQQKWTKGDVVHVHVN 295


>gb|EOY05583.1| P-loop containing nucleoside triphosphate hydrolases superfamily
           protein isoform 2 [Theobroma cacao]
          Length = 409

 Score =  348 bits (893), Expect = 2e-93
 Identities = 178/272 (65%), Positives = 220/272 (80%), Gaps = 1/272 (0%)
 Frame = -2

Query: 815 LNPTSQHFNPNSTYRTPKLFFYPKHLRASFTSSNEEANTDTKDS-STATLRELCHGHVPE 639
           L P +++ N +S+       F  K L +S+ S++     + + + ++ TLRE+C  HVP+
Sbjct: 29  LQPRNRYLNLSSSAN-----FSAKALFSSYNSNSVPLTKELETNCNSLTLREICQDHVPD 83

Query: 638 HVIHRAEEMGYVIPTEVQLQALPFLFSGRDSVLHAQTGSGKTLAYLLQVLSVIDSQRSAV 459
           HV+ R EE+GYV+PT+VQ +ALP LFSG D +LHAQTGSGKTL YLL + SVI+ +RSAV
Sbjct: 84  HVLGRMEELGYVMPTDVQREALPVLFSGNDCILHAQTGSGKTLTYLLLIYSVINPKRSAV 143

Query: 458 QALIVVPTRELGIQVTKVARMLASNPSERESGLKSCTVMALLDGGMLKRHKSWLKAEPPT 279
           QALIVVPTRELG+QVTKVARMLA+ P + E   KS TVMALLDGGML+RHKSWLKAEPP 
Sbjct: 144 QALIVVPTRELGMQVTKVARMLAAKPMDPEVEQKSYTVMALLDGGMLRRHKSWLKAEPPN 203

Query: 278 IVVATIGSLCQMIEKHILQLDSCQVLVVDEVDFMFNSSKEVSSLKRLLTSYSSSKNRQTI 99
           IVVATIGSL QM+EK I +LDS ++LVVDEVDF+FNSSK+VSS+++LLTSYSS  NRQT+
Sbjct: 204 IVVATIGSLSQMLEKQIFKLDSMRILVVDEVDFIFNSSKQVSSIRKLLTSYSSCNNRQTV 263

Query: 98  FASASIPQHRRFLYDCMQQKWTRADVVHVHVN 3
           FASASIPQHRRFL+DC+QQKWT+ DVVHVHVN
Sbjct: 264 FASASIPQHRRFLHDCIQQKWTKGDVVHVHVN 295


>gb|EOY05582.1| P-loop containing nucleoside triphosphate hydrolases superfamily
           protein isoform 1 [Theobroma cacao]
          Length = 477

 Score =  348 bits (893), Expect = 2e-93
 Identities = 178/272 (65%), Positives = 220/272 (80%), Gaps = 1/272 (0%)
 Frame = -2

Query: 815 LNPTSQHFNPNSTYRTPKLFFYPKHLRASFTSSNEEANTDTKDS-STATLRELCHGHVPE 639
           L P +++ N +S+       F  K L +S+ S++     + + + ++ TLRE+C  HVP+
Sbjct: 29  LQPRNRYLNLSSSAN-----FSAKALFSSYNSNSVPLTKELETNCNSLTLREICQDHVPD 83

Query: 638 HVIHRAEEMGYVIPTEVQLQALPFLFSGRDSVLHAQTGSGKTLAYLLQVLSVIDSQRSAV 459
           HV+ R EE+GYV+PT+VQ +ALP LFSG D +LHAQTGSGKTL YLL + SVI+ +RSAV
Sbjct: 84  HVLGRMEELGYVMPTDVQREALPVLFSGNDCILHAQTGSGKTLTYLLLIYSVINPKRSAV 143

Query: 458 QALIVVPTRELGIQVTKVARMLASNPSERESGLKSCTVMALLDGGMLKRHKSWLKAEPPT 279
           QALIVVPTRELG+QVTKVARMLA+ P + E   KS TVMALLDGGML+RHKSWLKAEPP 
Sbjct: 144 QALIVVPTRELGMQVTKVARMLAAKPMDPEVEQKSYTVMALLDGGMLRRHKSWLKAEPPN 203

Query: 278 IVVATIGSLCQMIEKHILQLDSCQVLVVDEVDFMFNSSKEVSSLKRLLTSYSSSKNRQTI 99
           IVVATIGSL QM+EK I +LDS ++LVVDEVDF+FNSSK+VSS+++LLTSYSS  NRQT+
Sbjct: 204 IVVATIGSLSQMLEKQIFKLDSMRILVVDEVDFIFNSSKQVSSIRKLLTSYSSCNNRQTV 263

Query: 98  FASASIPQHRRFLYDCMQQKWTRADVVHVHVN 3
           FASASIPQHRRFL+DC+QQKWT+ DVVHVHVN
Sbjct: 264 FASASIPQHRRFLHDCIQQKWTKGDVVHVHVN 295


>emb|CBI26203.3| unnamed protein product [Vitis vinifera]
          Length = 486

 Score =  347 bits (891), Expect = 3e-93
 Identities = 175/244 (71%), Positives = 206/244 (84%), Gaps = 6/244 (2%)
 Frame = -2

Query: 716 NEEANTDTKD--SSTATLRELCHGHVPEHVI----HRAEEMGYVIPTEVQLQALPFLFSG 555
           N  + T+  D    T TLRE+C G VPEHVI     R EE+G+++PT+VQ QALP L SG
Sbjct: 61  NSSSITEASDIGERTLTLREICQGCVPEHVIALICFRIEEVGFIVPTDVQQQALPVLLSG 120

Query: 554 RDSVLHAQTGSGKTLAYLLQVLSVIDSQRSAVQALIVVPTRELGIQVTKVARMLASNPSE 375
           RD +LHAQTGSGKTL YLL + SV++++ SAVQALIVVPTRELGIQVTKVARMLA+ P E
Sbjct: 121 RDCILHAQTGSGKTLTYLLLIFSVVNTKISAVQALIVVPTRELGIQVTKVARMLAAKPME 180

Query: 374 RESGLKSCTVMALLDGGMLKRHKSWLKAEPPTIVVATIGSLCQMIEKHILQLDSCQVLVV 195
            E   KSCTVMALLDGGMLKRHKSWLKAEPPTIVVAT+ SLCQM+EK I +L+S +VLV+
Sbjct: 181 PELEQKSCTVMALLDGGMLKRHKSWLKAEPPTIVVATVRSLCQMLEKQIFKLESMRVLVI 240

Query: 194 DEVDFMFNSSKEVSSLKRLLTSYSSSKNRQTIFASASIPQHRRFLYDCMQQKWTRADVVH 15
           DEVDFMFN+SK+V SL++LLTSYSS+ NRQT+FASASIPQHRRFL+DC+QQKWT++DVVH
Sbjct: 241 DEVDFMFNASKQVGSLRKLLTSYSSTNNRQTVFASASIPQHRRFLHDCIQQKWTKSDVVH 300

Query: 14  VHVN 3
           VHVN
Sbjct: 301 VHVN 304