BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00057278
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi...    59   4e-07
gb|AAC33963.1| contains similarity to reverse transcriptases (Pf...    57   2e-06
emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera]    56   3e-06
emb|CAB10526.1| retrotransposon like protein [Arabidopsis thalia...    56   3e-06
emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera]    55   6e-06

>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1333

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 25/53 (47%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
 Frame = +2

Query: 83  RPLLFRSNVPIMTWTDCLLTVNYLVNRTP-RLFGDISPYEKLHKRPPYYYYMR 238
           R L F++N+PI  W +C+LT  YL+NRTP  +  D +PYE+LHK+ P + ++R
Sbjct: 561 RALRFQANLPIQFWGECVLTAAYLINRTPSSVLNDSTPYERLHKKQPRFDHLR 613


>gb|AAC33963.1| contains similarity to reverse transcriptases (Pfam; rvt.hmm,
           score: 11.19) [Arabidopsis thaliana]
          Length = 1633

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
 Frame = +2

Query: 23  CAYGKCECEGVKKKNSYFQT--RPLLFRSNVPIMTWTDCLLTVNYLVNRTPR-LFGDISP 193
           CAY   +   V++K+ +     R LLF+SNVP+  W+DC+LT  YL+NR P  L  + +P
Sbjct: 647 CAYTPQQNSVVERKHQHLLNIARSLLFQSNVPLQYWSDCVLTAAYLINRLPSPLLDNKTP 706

Query: 194 YEKLHKRPPYYYYMRT 241
           +E L K+ P Y  +++
Sbjct: 707 FELLLKKIPDYTLLKS 722


>emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera]
          Length = 1262

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 23/53 (43%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
 Frame = +2

Query: 83  RPLLFRSNVPIMTWTDCLLTVNYLVNRTP-RLFGDISPYEKLHKRPPYYYYMR 238
           R L+F+S +P+  WTDC+LT  +L+NRTP  +  + +PY+ L ++PP Y Y +
Sbjct: 676 RSLMFQSKLPLSYWTDCVLTXTHLINRTPSSILNNQTPYQLLFQKPPNYNYFK 728


>emb|CAB10526.1| retrotransposon like protein [Arabidopsis thaliana]
           gi|7268497|emb|CAB78748.1| retrotransposon like protein
           [Arabidopsis thaliana]
          Length = 1433

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 26/54 (48%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
 Frame = +2

Query: 83  RPLLFRSNVPIMTWTDCLLTVNYLVNRTPR-LFGDISPYEKLHKRPPYYYYMRT 241
           R LLF+SN+P+  W DC+LT  +L+NR P  +  + SPYEKL   PP Y  ++T
Sbjct: 713 RALLFQSNIPLEFWGDCVLTAVFLINRLPTPVLNNKSPYEKLKNIPPAYESLKT 766


>emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera]
          Length = 1288

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 25/53 (47%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
 Frame = +2

Query: 83  RPLLFRSNVPIMTWTDCLLTVNYLVNRTPRLF-GDISPYEKLHKRPPYYYYMR 238
           R LLF S++P+  W+DC+LT  YL+NRTP  F  + +P+E LH + P Y ++R
Sbjct: 583 RALLFXSSLPVCYWSDCILTAVYLINRTPSPFLNNKTPFEILHDKLPDYSHLR 635