BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00057243
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis t...    59   5e-07
emb|CAN65229.1| hypothetical protein VITISV_011708 [Vitis vinifera]    58   7e-07
gb|AAC62795.1| contains similarity to retroviral aspartyl protea...    58   9e-07
gb|AAF79427.1|AC025808_9 F18O14.19 [Arabidopsis thaliana]              54   1e-05

>dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1475

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 36/100 (36%), Positives = 53/100 (53%), Gaps = 10/100 (10%)
 Frame = -3

Query: 280 EFHLNIISVSQLTNNDLYIIEFSSNYAVIHERKTREKTGKAKRLLGLYVLQ----DAARN 113
           EF LN++SVSQ T +    I F  +  VI +    +K G+  ++ GLYVL     +    
Sbjct: 506 EFRLNLLSVSQQTKDMKCKIYFDEDCCVIQDPIKEQKIGRGNQIGGLYVLDTSSVECTSV 565

Query: 112 DTDSHVV------GLVSFETWHNRLGHPAYDRLEVLKDHL 11
           D +S V        +V    WH+RLGHP+Y++ +VL D L
Sbjct: 566 DINSSVTEKQYCNAVVDSALWHSRLGHPSYEKNDVLHDVL 605


>emb|CAN65229.1| hypothetical protein VITISV_011708 [Vitis vinifera]
          Length = 1149

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 30/84 (35%), Positives = 49/84 (58%)
 Frame = -3

Query: 268 NIISVSQLTNNDLYIIEFSSNYAVIHERKTREKTGKAKRLLGLYVLQDAARNDTDSHVVG 89
           N+ISVSQL  +   +I+ +  + VI +R TR+  G  ++  GLY L  AA       + G
Sbjct: 372 NLISVSQLLRDSGLVIQLTDKFCVIQDRSTRKVIGAGEQREGLYFLNGAASVHA-FKMNG 430

Query: 88  LVSFETWHNRLGHPAYDRLEVLKD 17
           + SFE WH R+G+P++  L ++ +
Sbjct: 431 VTSFELWHRRMGYPSFKVLGLIPE 454


>gb|AAC62795.1| contains similarity to retroviral aspartyl proteases (Pfam:
           rvp.hmm, score: 11.80) [Arabidopsis thaliana]
          Length = 1244

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 33/90 (36%), Positives = 49/90 (54%)
 Frame = -3

Query: 280 EFHLNIISVSQLTNNDLYIIEFSSNYAVIHERKTREKTGKAKRLLGLYVLQDAARNDTDS 101
           EF LN+IS+S LT++    + F  +   I +     + G+ +R+  LYVL      D+ S
Sbjct: 478 EFRLNLISISSLTSDIGSRVIFDPSCCEIQDLTKDLRIGRGRRIGNLYVLDTTPPLDSVS 537

Query: 100 HVVGLVSFETWHNRLGHPAYDRLEVLKDHL 11
            V  +V    WH R+GHPAY RL+ + D L
Sbjct: 538 -VNAVVDVSLWHMRMGHPAYSRLDAISDIL 566


>gb|AAF79427.1|AC025808_9 F18O14.19 [Arabidopsis thaliana]
          Length = 1158

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 29/85 (34%), Positives = 44/85 (51%)
 Frame = -3

Query: 274 HLNIISVSQLTNNDLYIIEFSSNYAVIHERKTREKTGKAKRLLGLYVLQDAARNDTDSHV 95
           H ++ISVSQLT +  Y+ + +    VI +R T+   G  ++L GLY  +         H 
Sbjct: 236 HCHLISVSQLTRDSGYMFQITDKVCVIQDRITKTLIGAGEQLNGLYFFRGLGVAAPVQH- 294

Query: 94  VGLVSFETWHNRLGHPAYDRLEVLK 20
                 + WH RLGHP+   +E+LK
Sbjct: 295 KDSTPIDVWHRRLGHPSSKAMEMLK 319