BLASTX nr result

ID: Atractylodes22_contig00057211 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00057211
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55578.1| copia-type polyprotein [Rosa rugosa]                    61   7e-15
emb|CAN78427.1| hypothetical protein VITISV_001243 [Vitis vinifera]    53   3e-11
emb|CAN72600.1| hypothetical protein VITISV_036712 [Vitis vinifera]    52   7e-10
emb|CAN74283.1| hypothetical protein VITISV_032452 [Vitis vinifera]    44   2e-09
emb|CAN81156.1| hypothetical protein VITISV_016610 [Vitis vinifera]    50   3e-09

>gb|AFP55578.1| copia-type polyprotein [Rosa rugosa]
          Length = 1187

 Score = 60.8 bits (146), Expect(2) = 7e-15
 Identities = 27/44 (61%), Positives = 33/44 (75%)
 Frame = -3

Query: 134  MVTLSST*VEYVAATTCACQSVWMKEILNTFEENQCKCDTVFSD 3
            +VTLS+T  EYVAA  CACQSVWM+ +LN    +QCKC T+F D
Sbjct: 1068 VVTLSTTEAEYVAAAGCACQSVWMRRVLNKLGYSQCKCVTMFCD 1111



 Score = 44.3 bits (103), Expect(2) = 7e-15
 Identities = 22/45 (48%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
 Frame = -2

Query: 237  VFYKRGSNDVIKGHTD--IAGDLDGGRSTSEHVLMMNGDFIKYIS 109
            VFY+RG +D + G+TD   AGD+DG RSTS  V M++G  + + S
Sbjct: 1019 VFYRRGVDDELVGYTDSDYAGDMDGKRSTSGFVFMLSGGAVSWSS 1063


>emb|CAN78427.1| hypothetical protein VITISV_001243 [Vitis vinifera]
          Length = 1770

 Score = 53.1 bits (126), Expect(2) = 3e-11
 Identities = 21/44 (47%), Positives = 32/44 (72%)
 Frame = -3

Query: 134 MVTLSST*VEYVAATTCACQSVWMKEILNTFEENQCKCDTVFSD 3
           +V+LS+T  E++AAT+CACQ++W++ IL+     Q  C TVF D
Sbjct: 189 IVSLSTTEAEFIAATSCACQAIWIRRILDKLSHTQSNCTTVFCD 232



 Score = 39.7 bits (91), Expect(2) = 3e-11
 Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
 Frame = -2

Query: 267 KYEAYSINYEVFYKRGSNDVIKGHT--DIAGDLDGGRSTSEHVLMMNGDFIKYIS 109
           +Y   + N  +FYK+G ND +   T  D  GDL+  +STS +V M++ + + + S
Sbjct: 130 RYLRGTTNLRIFYKKGGNDKLVAFTDSDYPGDLEDRKSTSGYVFMLSSEAVSWYS 184


>emb|CAN72600.1| hypothetical protein VITISV_036712 [Vitis vinifera]
          Length = 1246

 Score = 51.6 bits (122), Expect(2) = 7e-10
 Identities = 22/44 (50%), Positives = 29/44 (65%)
 Frame = -3

Query: 134  MVTLSST*VEYVAATTCACQSVWMKEILNTFEENQCKCDTVFSD 3
            +VTL +T VE+VAAT CACQ++WMK +L      Q  C T+  D
Sbjct: 1143 IVTLLTTKVEFVAATACACQAIWMKRVLKKLSHEQKGCTTIMCD 1186



 Score = 36.6 bits (83), Expect(2) = 7e-10
 Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
 Frame = -2

Query: 267  KYEAYSINYEVFYKRGSNDVIKGHTD--IAGDLDGGRSTSEHVLMMNGDFIKYIS 109
            +Y   + NY + YK+G  + +   TD   AGD+D  +STS +V +++   I ++S
Sbjct: 1084 RYLKGTTNYGILYKKGREEELLVFTDSDYAGDIDDRKSTSGYVFLLSSGVISWLS 1138


>emb|CAN74283.1| hypothetical protein VITISV_032452 [Vitis vinifera]
          Length = 1338

 Score = 44.3 bits (103), Expect(2) = 2e-09
 Identities = 18/44 (40%), Positives = 29/44 (65%)
 Frame = -3

Query: 134  MVTLSST*VEYVAATTCACQSVWMKEILNTFEENQCKCDTVFSD 3
            +V+LS+T  E++AAT+C CQ++W++ IL      Q    TV+ D
Sbjct: 1219 VVSLSTTEAEFIAATSCVCQAIWLRRILEGLNHAQHDSTTVYCD 1262



 Score = 42.0 bits (97), Expect(2) = 2e-09
 Identities = 21/55 (38%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
 Frame = -2

Query: 267  KYEAYSINYEVFYKRGSNDVIKGHTD--IAGDLDGGRSTSEHVLMMNGDFIKYIS 109
            +Y   +I++ VFYK+G N+ +  +TD   AGDLD  +STS +V M++   + + S
Sbjct: 1160 RYLKGTIDFGVFYKKGGNEELIAYTDSDYAGDLDDRKSTSGYVFMLSSGAVSWSS 1214


>emb|CAN81156.1| hypothetical protein VITISV_016610 [Vitis vinifera]
          Length = 1021

 Score = 49.7 bits (117), Expect(2) = 3e-09
 Identities = 20/44 (45%), Positives = 31/44 (70%)
 Frame = -3

Query: 134  MVTLSST*VEYVAATTCACQSVWMKEILNTFEENQCKCDTVFSD 3
            +V+LS+T  E++AA +CACQ+VW+K +L    +NQ K  T+  D
Sbjct: 907  VVSLSTTEAEFIAAASCACQAVWLKRVLGKLSQNQGKSTTIHCD 950



 Score = 36.6 bits (83), Expect(2) = 3e-09
 Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
 Frame = -2

Query: 267  KYEAYSINYEVFYKRGSNDVIKGHTD--IAGDLDGGRSTSEHVLMMNGDFIKYIS 109
            +Y   +  + +FYK+G +D +  +TD   AGDL+  +STS +V +++   + + S
Sbjct: 848  RYLKGTTEFGIFYKKGGDDELAAYTDSDYAGDLEDKKSTSGYVFLLSSRAVSWSS 902


Top