BLASTX nr result

ID: Atractylodes22_contig00057202 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00057202
         (251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo s...   100   2e-19
emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]    97   1e-18
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    95   5e-18
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...    95   5e-18
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    93   2e-17

>gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1185

 Score =  100 bits (248), Expect = 2e-19
 Identities = 40/83 (48%), Positives = 62/83 (74%)
 Frame = +1

Query: 1    IPKHSSVPPLLLEGFHNSPTGGHAGENKTYHRAALEVFWAGMRSDISTWVQQCDICQKNK 180
            +PK SS+ P +L  FH+   GGH+G+ +TY R A E++W GM++DI  +V QC +CQ+NK
Sbjct: 856  LPKTSSLLPTILHTFHDLVVGGHSGQLRTYKRIAAELYWEGMKNDIKIYVDQCPVCQQNK 915

Query: 181  SLSGSPAGLMQPLSLPDKVWDDL 249
            + + SPAGL+QPL +P ++W+D+
Sbjct: 916  TQALSPAGLLQPLPIPSRIWEDI 938


>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 42/83 (50%), Positives = 60/83 (72%)
 Frame = +1

Query: 1    IPKHSSVPPLLLEGFHNSPTGGHAGENKTYHRAALEVFWAGMRSDISTWVQQCDICQKNK 180
            +PK S + P LL+  H S  GGH+G   TY R   + FW GM++DI  +V++C +CQ+NK
Sbjct: 1711 LPKASPLVPALLQEGHASVVGGHSGFLXTYKRLTRDFFWVGMKNDIKEFVEKCLVCQQNK 1770

Query: 181  SLSGSPAGLMQPLSLPDKVWDDL 249
            +L+ SPAGL+QPL +PDK+WDD+
Sbjct: 1771 TLTLSPAGLLQPLPIPDKIWDDV 1793


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 42/83 (50%), Positives = 60/83 (72%)
 Frame = +1

Query: 1    IPKHSSVPPLLLEGFHNSPTGGHAGENKTYHRAALEVFWAGMRSDISTWVQQCDICQKNK 180
            IPK+  +   LLE +H+SP GGH+G  KTY R A E +W GM+ D++T+VQ C ICQ+ K
Sbjct: 1096 IPKNVPLTTTLLEEYHSSPMGGHSGIFKTYKRLAGEWYWKGMKKDVTTFVQNCQICQQFK 1155

Query: 181  SLSGSPAGLMQPLSLPDKVWDDL 249
            + + SPAGL+QPL +P  +W+D+
Sbjct: 1156 TSTLSPAGLLQPLPIPLAIWEDI 1178


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
            finger, CCHC-type; Peptidase aspartic, active site;
            Polynucleotidyl transferase, Ribonuclease H fold
            [Medicago truncatula]
          Length = 1297

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 38/83 (45%), Positives = 57/83 (68%)
 Frame = +1

Query: 1    IPKHSSVPPLLLEGFHNSPTGGHAGENKTYHRAALEVFWAGMRSDISTWVQQCDICQKNK 180
            +   S + P LL  FH++P GGH+G  +TY R A  V+W GM++ +  +V+ CD CQ+ K
Sbjct: 855  VSSKSVMIPTLLAEFHSTPQGGHSGFYRTYRRLAANVYWVGMKNTVQEYVRSCDTCQRQK 914

Query: 181  SLSGSPAGLMQPLSLPDKVWDDL 249
             L+ SP GL+QPL +PD++W+DL
Sbjct: 915  YLASSPGGLLQPLPVPDRIWEDL 937


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 41/83 (49%), Positives = 56/83 (67%)
 Frame = +1

Query: 1    IPKHSSVPPLLLEGFHNSPTGGHAGENKTYHRAALEVFWAGMRSDISTWVQQCDICQKNK 180
            IP  S++ P LL  +H++P GGHAGE KTY R A E +W GMR +++ +V QC ICQ+ K
Sbjct: 1163 IPSSSTIIPKLLYEYHDAPMGGHAGELKTYLRLAAEWYWRGMRQEVARYVHQCLICQQQK 1222

Query: 181  SLSGSPAGLMQPLSLPDKVWDDL 249
                 P GL+QPL +P  VW+D+
Sbjct: 1223 VSQQHPRGLLQPLPIPSLVWEDI 1245


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