BLASTX nr result

ID: Atractylodes22_contig00057199 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00057199
         (205 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_177439.2| Root hair defective 3 GTP-binding protein (RHD3...   118   6e-25
ref|XP_002527405.1| Protein SEY1, putative [Ricinus communis] gi...   117   7e-25
ref|XP_002327435.1| predicted protein [Populus trichocarpa] gi|2...   117   7e-25
ref|NP_974308.1| Root hair defective 3 GTP-binding protein RHD3 ...   115   4e-24
ref|NP_188003.1| Root hair defective 3 GTP-binding protein RHD3 ...   115   4e-24

>ref|NP_177439.2| Root hair defective 3 GTP-binding protein (RHD3) [Arabidopsis
           thaliana] gi|332320568|sp|Q9SSN0.2|RD3H1_ARATH RecName:
           Full=Protein ROOT HAIR DEFECTIVE 3 homolog 1; AltName:
           Full=Protein SEY1 homolog 2 gi|332197275|gb|AEE35396.1|
           Root hair defective 3 GTP-binding protein (RHD3)
           [Arabidopsis thaliana]
          Length = 795

 Score =  118 bits (295), Expect = 6e-25
 Identities = 54/68 (79%), Positives = 62/68 (91%)
 Frame = -2

Query: 204 LASSTWEKVPGSRTLITPVQCKSLWSQFQKETEYTVTQAISSQEANKRSSNWLPPPSAII 25
           LASSTW++VP SRTLITPVQCKS+W QF+ ETEYTVTQAIS+QEAN+R +NWLPPP AI+
Sbjct: 630 LASSTWDEVPSSRTLITPVQCKSIWRQFKTETEYTVTQAISAQEANRRGNNWLPPPWAIL 689

Query: 24  ALFVLGFN 1
           AL VLGFN
Sbjct: 690 ALIVLGFN 697


>ref|XP_002527405.1| Protein SEY1, putative [Ricinus communis]
           gi|223533215|gb|EEF34971.1| Protein SEY1, putative
           [Ricinus communis]
          Length = 813

 Score =  117 bits (294), Expect = 7e-25
 Identities = 54/68 (79%), Positives = 63/68 (92%)
 Frame = -2

Query: 204 LASSTWEKVPGSRTLITPVQCKSLWSQFQKETEYTVTQAISSQEANKRSSNWLPPPSAII 25
           LASSTW++VP S+TLITPVQCKSLW QF+ ETEY+VTQAIS+QEANKR++NWLPPP AI+
Sbjct: 629 LASSTWDEVPSSKTLITPVQCKSLWRQFKAETEYSVTQAISAQEANKRNNNWLPPPWAIV 688

Query: 24  ALFVLGFN 1
           AL VLGFN
Sbjct: 689 ALVVLGFN 696


>ref|XP_002327435.1| predicted protein [Populus trichocarpa] gi|222835989|gb|EEE74410.1|
           predicted protein [Populus trichocarpa]
          Length = 716

 Score =  117 bits (294), Expect = 7e-25
 Identities = 54/68 (79%), Positives = 63/68 (92%)
 Frame = -2

Query: 204 LASSTWEKVPGSRTLITPVQCKSLWSQFQKETEYTVTQAISSQEANKRSSNWLPPPSAII 25
           LAS++WEK+P SRTLITPVQCKSLW QF+ ETEYTVTQAIS+QEA+KR++NWLPPP AI+
Sbjct: 534 LASNSWEKIPSSRTLITPVQCKSLWRQFKTETEYTVTQAISAQEAHKRNNNWLPPPWAIL 593

Query: 24  ALFVLGFN 1
           AL VLGFN
Sbjct: 594 ALVVLGFN 601


>ref|NP_974308.1| Root hair defective 3 GTP-binding protein RHD3 [Arabidopsis
           thaliana] gi|332641907|gb|AEE75428.1| Root hair
           defective 3 GTP-binding protein RHD3 [Arabidopsis
           thaliana]
          Length = 738

 Score =  115 bits (288), Expect = 4e-24
 Identities = 54/68 (79%), Positives = 61/68 (89%)
 Frame = -2

Query: 204 LASSTWEKVPGSRTLITPVQCKSLWSQFQKETEYTVTQAISSQEANKRSSNWLPPPSAII 25
           LASSTWEKV   +TLITPVQCKSLW QF+ ETEYTVTQAIS+QEAN+R++NWLPPP AI+
Sbjct: 561 LASSTWEKVAPEKTLITPVQCKSLWRQFKNETEYTVTQAISAQEANRRNNNWLPPPWAIL 620

Query: 24  ALFVLGFN 1
           AL VLGFN
Sbjct: 621 ALVVLGFN 628


>ref|NP_188003.1| Root hair defective 3 GTP-binding protein RHD3 [Arabidopsis
           thaliana] gi|75279781|sp|P93042.1|RHD3_ARATH RecName:
           Full=Protein ROOT HAIR DEFECTIVE 3; AltName:
           Full=Protein FRAGILE FIBER 4; AltName: Full=Protein SEY1
           homolog 1 gi|1839188|gb|AAB58375.1| root hair defective
           3 [Arabidopsis thaliana] gi|20260178|gb|AAM12987.1|
           unknown protein [Arabidopsis thaliana]
           gi|22136246|gb|AAM91201.1| unknown protein [Arabidopsis
           thaliana] gi|332641908|gb|AEE75429.1| Root hair
           defective 3 GTP-binding protein RHD3 [Arabidopsis
           thaliana]
          Length = 802

 Score =  115 bits (288), Expect = 4e-24
 Identities = 54/68 (79%), Positives = 61/68 (89%)
 Frame = -2

Query: 204 LASSTWEKVPGSRTLITPVQCKSLWSQFQKETEYTVTQAISSQEANKRSSNWLPPPSAII 25
           LASSTWEKV   +TLITPVQCKSLW QF+ ETEYTVTQAIS+QEAN+R++NWLPPP AI+
Sbjct: 625 LASSTWEKVAPEKTLITPVQCKSLWRQFKNETEYTVTQAISAQEANRRNNNWLPPPWAIL 684

Query: 24  ALFVLGFN 1
           AL VLGFN
Sbjct: 685 ALVVLGFN 692


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