BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00057119
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containi...   105   4e-21
ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata] g...   101   5e-20
ref|NP_198787.1| pentatricopeptide repeat-containing protein [Ar...   100   1e-19
ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   100   2e-19
ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containi...   100   2e-19

>ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  105 bits (262), Expect = 4e-21
 Identities = 54/80 (67%), Positives = 67/80 (83%), Gaps = 1/80 (1%)
 Frame = +3

Query: 12  NSSSAVIDLLVKSYSNLKMVRRGLNTIHLAISHGFMPGVLSYNSVLDAIIKSNEPIKL-A 188
           NSSSAV DL+VKSYS+L M+ + +NTI+LA S GFMPGVLSYNSVLDAI++S   +KL A
Sbjct: 139 NSSSAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSA 198

Query: 189 EDMYLHMMRSGVSPNVFTYN 248
           E++Y  M+RS VSPNV+TYN
Sbjct: 199 EEVYREMIRSRVSPNVYTYN 218


>ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
           gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 747

 Score =  101 bits (252), Expect = 5e-20
 Identities = 47/80 (58%), Positives = 64/80 (80%)
 Frame = +3

Query: 9   CNSSSAVIDLLVKSYSNLKMVRRGLNTIHLAISHGFMPGVLSYNSVLDAIIKSNEPIKLA 188
           CNS+S+V DL+VKSYS L ++ + L+ +HL+ +HGFMPGVLSYN+VLDA I+S   I  A
Sbjct: 130 CNSTSSVFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFA 189

Query: 189 EDMYLHMMRSGVSPNVFTYN 248
           E+++  M++S VSPNVFTYN
Sbjct: 190 ENVFKEMLQSQVSPNVFTYN 209


>ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
           gi|10177971|dbj|BAB11377.1| unnamed protein product
           [Arabidopsis thaliana] gi|332007083|gb|AED94466.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 747

 Score =  100 bits (249), Expect = 1e-19
 Identities = 47/80 (58%), Positives = 62/80 (77%)
 Frame = +3

Query: 9   CNSSSAVIDLLVKSYSNLKMVRRGLNTIHLAISHGFMPGVLSYNSVLDAIIKSNEPIKLA 188
           C S+S+V DL+VKSYS L ++ + L+ +HLA +HGFMPGVLSYN+VLDA I+S   I  A
Sbjct: 130 CYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFA 189

Query: 189 EDMYLHMMRSGVSPNVFTYN 248
           E+++  M+ S VSPNVFTYN
Sbjct: 190 ENVFKEMLESQVSPNVFTYN 209


>ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Cucumis sativus]
          Length = 749

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 43/81 (53%), Positives = 66/81 (81%)
 Frame = +3

Query: 6   ECNSSSAVIDLLVKSYSNLKMVRRGLNTIHLAISHGFMPGVLSYNSVLDAIIKSNEPIKL 185
           +C SSSAV DL+VKS + + ++ + L+ ++LA S+GFMPGVLSYN++LDA+I++ + +K+
Sbjct: 127 QCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKI 186

Query: 186 AEDMYLHMMRSGVSPNVFTYN 248
           AE ++  M+ SGVSPNV+TYN
Sbjct: 187 AEGIFKEMVESGVSPNVYTYN 207


>ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Cucumis sativus]
          Length = 749

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 43/81 (53%), Positives = 66/81 (81%)
 Frame = +3

Query: 6   ECNSSSAVIDLLVKSYSNLKMVRRGLNTIHLAISHGFMPGVLSYNSVLDAIIKSNEPIKL 185
           +C SSSAV DL+VKS + + ++ + L+ ++LA S+GFMPGVLSYN++LDA+I++ + +K+
Sbjct: 127 QCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKI 186

Query: 186 AEDMYLHMMRSGVSPNVFTYN 248
           AE ++  M+ SGVSPNV+TYN
Sbjct: 187 AEGIFKEMVESGVSPNVYTYN 207